BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489171
Length=4889
Score E
Sequences producing significant alignments: (Bits) Value
AT5G23150.1 | Symbols: HUA2 | Tudor/PWWP/MBT domain-containing ... 7239 0.0
> AT5G23150.1 | Symbols: HUA2 | Tudor/PWWP/MBT domain-containing
protein | chr5:7785835-7792489 FORWARD LENGTH=4926
Length=4926
Score = 7239 bits (3920), Expect = 0.0
Identities = 4605/4925 (94%), Gaps = 89/4925 (2%)
Strand=Plus/Plus
Query 1 CTTTCTGCCCTAAGCCCATCGtctctctatccctcgcgaccgcctcacctctctctgtct 60
||||| ||||||| ||||||||||||| | ||||||||||||||| ||||||||||||
Sbjct 53 CTTTCAGCCCTAACCCCATCGTCTCTC--T--CTCGCGACCGCCTCATCTCTCTCTGTCT 108
Query 61 ggatcaatctcgctct-t-tctctctc-gctccgtctctGTTGCTCGTTACGTGATCCGT 117
|||||||||||||||| | | |||||| ||| |||| ||||| |||||| ||||||||||
Sbjct 109 GGATCAATCTCGCTCTCTCTTTCTCTCGGCTACGTCGCTGTTTCTCGTTTCGTGATCCGT 168
Query 118 AGCTGTCTCCGCTACTACCTCAATCAGCGAGCTTCGTCCGGTGGAATTATCTTCGGAT-- 175
|||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||
Sbjct 169 AGCTGTCTCCGCTACTACCTTAATCAGCGAGCTTCTTCCGGTGGAATAATCTTCGGATAG 228
Query 176 -AGGAATCGGAGGA---TTCTAATTGTGTCTCTGGGTTGGATTGGATTACGTAATTCGGT 231
||||||||||| | ||||||||| || |||||||||||||||| |||||||||| ||
Sbjct 229 GAGGAATCGGAGAATTCTTCTAATTGGGTGTCTGGGTTGGATTGGAATACGTAATTCTGT 288
Query 232 TGGATGTTCCTATTTCGCGTTCAAAATTAGGGTTTATAGAGGTCTCGCGTATGGCTCATG 291
||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 289 TGGGTGTTCCAATTTCGCGTTCAAAATTAGGGTTTATAGAGGTCTCGCCTATGGCTCCTG 348
Query 292 GGCGTAAAAGAGGAGCGAGCAAGGCC-AAGACCAAAGGGCAGTTGATTCTCGGTGATCTG 350
|||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct 349 GGCGTAAAAGAGGAGCGAGCAAGGCCAAAG-CCAAAGGGCAGTTGGTTCTCGGTGATCTG 407
Query 351 GTTCTTGCCAAAGTCAAAGGCTTCCCTGCTTGGCCTGCCAAGATCAGCCGGCCTGAAGAT 410
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 408 GTTCTCGCCAAAGTCAAAGGCTTCCCTGCTTGGCCTGCCAAGATCAGCCGGCCTGAAGAT 467
Query 411 TGGGATCGTGCGCTAGACCCAAAGAAGTACTTTGTTCAGTTCTTTGGAACAGAGGAAATA 470
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 468 TGGGATCGTGCGCCAGACCCAAAGAAGTACTTTGTTCAGTTCTTTGGAACAGAGGAAATA 527
Query 471 GCTTTTGTTGCGCCACCTGATATCCAAGCCTTCACTAGTGAGGCAAAGAGCAAACTATTA 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 528 GCTTTTGTTGCGCCACCTGATATCCAAGCCTTCACTAGTGAGGCAAAGAGCAAACTATTA 587
Query 531 GCAAGGTGTCAAGGTAAAACAGTCAAGTACTTTGCACAAGCTGTAGAGCAAATTTGCACT 590
||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 588 GCAAGATGTCAAGGTAAAACTGTCAAGTACTTTGCACAAGCTGTAGAGCAAATCTGCACT 647
Query 591 GCATTTGAAGAGTTGCAGAATCACAAGTCAAATGTTTTGGGCGATGAGGATCCTCTGGAT 650
|||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 648 GCATTTGAAGGGTTGCAGAATCACAAGTCAAATGCTTTGGGCGATGAGGATTCTCTGGAT 707
Query 651 GCTGCTGAACCTGGTTTGACAAAGGCTGAGATAGAGGATGGAACAGATCATATTGTCATT 710
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 708 GCTACTGAACCTGGTTTGACAAAGGCTGAGATAGTGGATGGAACAGATCATATTGTCATT 767
Query 711 GAGTCTGATG-GAACTAATAACTTTGATTCTAGGGTGGATCCTTGCTT-CCC----T--A 762
|||||||| | ||||| |||||||| ||| |||||||||||||||||| ||| | |
Sbjct 768 GAGTCTGA-GAGAACTGATAACTTTAATTTTAGGGTGGATCCTTGCTTCCCCAAATTAGA 826
Query 763 --AGAATATTGGTGAAGAGACAAAGGCTGAGATATGGAAGCTAGATTCATCTCCATTTCT 820
|||||| |||||| |||| ||||||||||||| ||||||||||||||||| |||||||
Sbjct 827 TGAGAATAATGGTGAGGAGAGAAAGGCTGAGATAAGGAAGCTAGATTCATCTTCATTTCT 886
Query 821 GGAATCAAAGATCACAACCACATTCTCTGGTAGCGAGTCACTGGAGCATGGTTCATATGA 880
|||||||||| ||| |||||||| | ||| ||||||||||||||||||| |||||| |||
Sbjct 887 GGAATCAAAGGTCAAAACCACATCCCCTGTTAGCGAGTCACTGGAGCATAGTTCATTTGA 946
Query 881 CCCTAGAATAAAGGAAGGAGATTTTGATAAAGGAACTGACGGTAGTGCTTGCATTGAACA 940
||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 947 CCCTAAAATAAAGAAAGAAGATTTTGATAAAGGAACTGACGGTAGTGCTTGCAATGAACA 1006
Query 941 TTTTGGTAATGGCCAAAAGAAGCTGGCCAACGGTAAGAGAATTAAGAAGGAAGCTGGTGG 1000
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 1007 TTTTGGTAATGGCCAAAAGAAGCTGGCTAACGGTAAGAGAATTAAGAAGGAAGCAGGTGG 1066
Query 1001 CTCTGATATTAAAGGTGAAGATACAGTTCATAGAGACAGAAGCAATAACTCACATGTGCC 1060
|||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 1067 CTCTGATAGAAAAGGTGAAGATACAGTTCATCGAGACAAAAGCAATAACTCACATGTGCC 1126
Query 1061 CGGTGGTCGAACTGCCAGTGGTAACTCTGATTCCAAAAAGTTGAAAGGTCTGTTGACAGA 1120
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 1127 TGGTGGTCGAACTGCCAGTGGTAACTCTGATTCCAAAAAATCGAAAGGTCTGTTGACAGA 1186
Query 1121 GAAATCTAGCTCCAAAGTGTCTGCTGGCAAGCATGAAAATTCACCTGGCTTCAAGGGTGG 1180
|||| | ||||||||||||||||||| ||||||||||||||||||||| |||||| |||
Sbjct 1187 GAAAACCAGCTCCAAAGTGTCTGCTGATAAGCATGAAAATTCACCTGGCATCAAGGTTGG 1246
Query 1181 GGTTTCCGGAAAGAAAAGGAGGCTTGAAAGTGAACTAGGAAAGGTTGCACCAAGAGTAGA 1240
||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||
Sbjct 1247 GGTTTCCGGAAAGAAAAGGAGGCTTGAAAGTGAACAAGGTAAGCTTGCACCAAGAGTAGA 1306
Query 1241 TGAAAGTTCACGAGCTGCTAAAAAGCCGCGTTGTGAAAGTGCAGCAGACAAGAAAGAAAA 1300
|||||| ||||| ||||||||||||||||| ||||||||| |||||||| |||| |||
Sbjct 1307 TGAAAGCTCACGTGCTGCTAAAAAGCCGCGATGTGAAAGT---GCAGACAATAAAGTAAA 1363
Query 1301 GTGTGAAATTGATGATGGATCTGATTCTACTGGGACTGTATCAGATATTAAGCGTGAAAT 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1364 GTGTGAAATTGATGATGGATCTGATTCTACTGGGACTGTATCAGATATTAAGCGTGAAAT 1423
Query 1361 TGTTTTAGGATTAAGTGCTCGCGGTGGAAATTTACAATATGATAAAGAAGTC-GTTGCAT 1419
||||||||||||| ||||||||||||||||||| |||||||||||||||| | |||||||
Sbjct 1424 TGTTTTAGGATTAGGTGCTCGCGGTGGAAATTTTCAATATGATAAAGAAG-CAGTTGCAT 1482
Query 1420 ATACAAAGCGCCGGAGACAAACAATGGAGCATGCCATCTCTCCTTCTTTTTCTGGGTCTC 1479
|||||||||||| |||||| |||||||||||||| | |||||||||||||||||||||||
Sbjct 1483 ATACAAAGCGCCAGAGACAGACAATGGAGCATGCTACCTCTCCTTCTTTTTCTGGGTCTC 1542
Query 1480 GTGATAAATCCGGGAAAGGTCATCTGGAACAGAAAGACCGTTCCTCTCCTGTTAGTAATG 1539
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1543 GTGATAAATCTGGGAAAGGTCATCTGGAACAGAAAGACCGTTCCTCTCCTGTTCGTAATG 1602
Query 1540 TTAAGGCTCCAGCTGCACAGTCGCTGAAAAAACGGAGGGCTGTTTGTATCTATGACGAAG 1599
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1603 TTAAGGCTCCAGCTGCACAGTCGCTGAAAAAACGGAGGGCTGTTTGTATCTACGACGAAG 1662
Query 1600 ATGATGATGAAGATCCAAAAACTCCATTACATGGCAGACCAGCCATTGTTCCCAAAGCAG 1659
|||||||||||||||||||||| ||||||||||| | |||||||||||||||| ||||||
Sbjct 1663 ATGATGATGAAGATCCAAAAACCCCATTACATGGAAAACCAGCCATTGTTCCCCAAGCAG 1722
Query 1660 CATCAGTTTTGGCTGGTGGTCCTAAAAGTGCTACTCTGTGTCAAAGTACTTCTACCAAAG 1719
|||| |||||| ||| |||||||||||| |||| | ||||||| ||||||||||| ||||
Sbjct 1723 CATCTGTTTTGACTGATGGTCCTAAAAGGGCTAATGTGTGTCACAGTACTTCTACAAAAG 1782
Query 1720 GTAAGATGTCTGCTGGATCTACAGAGAATACTGAACTAAGGAAGTTCCCTCTGCGTAAAC 1779
|||||| ||||||||||||||||||| ||||||| |||| |||||||||||||||||||
Sbjct 1783 CTAAGATATCTGCTGGATCTACAGAGAGTACTGAAGTAAGAAAGTTCCCTCTGCGTAAAC 1842
Query 1780 ATTGTGAGGATGCATCACGTGTATTACCAGGCAATGTGGAGAATTCGACTAACAGCTTAC 1839
||||||||||||||||||||||||||||| |||||| ||||||||| ||||| |||||||
Sbjct 1843 ATTGTGAGGATGCATCACGTGTATTACCAAGCAATGCGGAGAATTCTACTAATAGCTTAC 1902
Query 1840 CCACGGTAAAACCCATCAATGAATTGCCGCCAAAGGATGTCAAACAGATCTTGCGATCTC 1899
| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1903 CTGTGGTAAAACCCATTAATGAATTGCCGCCAAAGGATGTCAAACAGATCTTGCAATCTC 1962
Query 1900 CGAAGATGTCCCCCCAGCTGGTTTTAACTAACAAGCACGTTGCAGGACAGCATAAACTTT 1959
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1963 CGAAGATGTCCCCTCAGCTGGTTTTAACTAACAAGCACGTTGCAGGACAGCATAAAGTTG 2022
Query 1960 TAAAATCATCTGTGAAAGTTTCTGATGTTGTGATGGCAAAGAAGCCTCAGAGTGATTCTT 2019
|||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 2023 TAAAATCATCGGTGAAAGTTTCTGGTGTTGTGATGGCAAAGAAGCCTCAAAGTGATTCTT 2082
Query 2020 GTAAGGAGACAGTTGCGGGATCTGATAAAATAAGCTCTTCTCAGTCTCAGCCAGCAAATC 2079
|||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2083 GTAAGGAGGCGGTTGCGGGATCTGACAAAATAAGCTCTTCTCAGTCTCAGCCAGCAAATC 2142
Query 2080 AGAGACACAAAGCAGCTTCAGTTGGAGAGAGGCCAACAGTTGTTTCAAAAGCTGCATCAC 2139
||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 2143 AGAGACACAAATCAGCTTCAGTTGGAGAGAGGCTAACAGTGGTTTCAAAAGCTGCATCAC 2202
Query 2140 GTTTGAATGACTCTGGTTCGAGAGACATGTCTGTGGACTTCTCTTCTGGC-ATGCTTGAT 2198
||||||||||||||||||| ||||||||||||| |||||| ||| || || ||||||||
Sbjct 2203 GTTTGAATGACTCTGGTTCAAGAGACATGTCTGAGGACTTGTCTGCT-GCTATGCTTGAC 2261
Query 2199 CTCAATCGAGAAAAGTGGAGTGCTCCATTTACCAGTGCAAAGACCCCAGATTCGGCTGCA 2258
|||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2262 CTCAATAGAGAAAAGGGGAGTGCTACATTTACCAGTGCAAAGACCCCAGATTCGGCTGCA 2321
Query 2259 TCTATGAAGGATCTAATTGCAGCTGCGCAGGCAAAAAGAAAACTCGCACATTCACAAAAC 2318
|||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||
Sbjct 2322 TCTATGAAGGATCTAATTGCTGCTGCGCAGGCAAAAAGAAAACTTGCACATACACAAAAT 2381
Query 2319 TCAATTTTCGGGAATTTGAACCCTAGTTTCTTGAGCATCAGTGATACACAGGTGAGGAGC 2378
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2382 TCAATTTTTGGGAATTTGAACCCTAGTTTCTTGAGCATCAGTGATACACAGGGGAGGAGC 2441
Query 2379 CATAGCCCATTTATGGTTCAGGATGCTTCAGCTTCTGCTGCCATCACAATGCCATTAGTT 2438
||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||
Sbjct 2442 CATAGCCCATTTATGGTTCAGAATGCTTCAGCTTCTGCTGCCATCTCAATGCCGTTAGTT 2501
Query 2439 GTTCAAGG--A-CATCAACAAGGTTCTTCTCCGTCAAATCATGGCCATCAGTCCTCATCA 2495
|||||||| | |||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 2502 GTTCAAGGTCATCATCAACAAGGTTCTTCTCCGTCAAATCATGGGCATCAGTCCTTATCA 2561
Query 2496 AGAAGTCAGATTGAGACTGATGATAATGAAGAGAGAAGACTTAGTTCAGGACATAAGTCA 2555
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2562 AGAAATCAGATTGAGACTGATGATAATGAAGAGAGAAGACTTAGTTCAGGGCATAAGTCA 2621
Query 2556 GTTGGAGGTTCACTTAGTGGTAGCACTGAGGCTGCTGTTTCCCGGGATGCTTTTGAAGGC 2615
|||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||
Sbjct 2622 GTTGGAGGTTCACTTAGTTGTAGCACTGAGGCTGCTATTTCTCGGGATGCTTTTGAAGGC 2681
Query 2616 ATGCTAGAGACCTTATCAAGAACTAGGGAAAGTATTGGACGTGCAACTCGCCTAGCAATT 2675
||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2682 ATGTTAGAGACCTTATCAAGAACCAGGGAAAGTATTGGACGTGCAACTCGCCTAGCAATT 2741
Query 2676 GATTGTGCCAAGTATGGGCTTGCTAGTGAGGTGGTGGAACTTCTCATACGAAAGTTGGAA 2735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2742 GATTGTGCCAAGTATGGGCTTGCTAGTGAGGTGGTGGAACTTCTCATACGAAAGTTGGAA 2801
Query 2736 AGTGAATCTCACTTCCATCGTAAAGTGGACTTGTTCTTTCTCGTTGACTCTATCACCCAG 2795
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2802 AGTGAATCTCACTTCCATCGTAAAGTGGACTTGTTCTTTCTCGTCGACTCTATCACCCAG 2861
Query 2796 TATTCGCACAGCCAAAAAGGTATTGCTGGTGCTTCTTACGTTCCTACTGTGCAAGCTGCT 2855
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2862 CATTCGCACAGCCAAAAAGGTATTGCTGGTGCTTCTTACGTTCCTACTGTGCAAGCTGCT 2921
Query 2856 TTGCCACGTCTTTTAGGTGCCGCTGCTCCTCCAGGGACTGGTGCTAGTGATAACCGCCGT 2915
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2922 TTGCCACGTCTTTTAGGTGCCGCTGCTCCTCCAGGGACTGGTGCTAGTGATAACCGTCGT 2981
Query 2916 AAATGTCTGAAGGTTCTGAAGTTGTGGCTTGAAAGGAAAGTTTTCCCTGAATCTCTTCTG 2975
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2982 AAATGTCTGAAGGTCCTGAAGTTGTGGCTTGAAAGGAAAGTTTTCCCTGAATCTCTTCTG 3041
Query 2976 CGGT-GTTATATTGATGATATTAGAGCTTCTGGTGATGACGCAACTGTTGGATTTTCCCT 3034
|| | |||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||
Sbjct 3042 CG-TCGTTATATTGATGATATTAGAGCTTCTGGTGATGATGCAACTGGTGGGTTTTCCCT 3100
Query 3035 GCGACGTCCTTCTAGATCTGAGCGCGCTGTAGATGATCCTATCAGGGAAATGGAAGGGAT 3094
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3101 GCGACGTCCTTCTAGATCTGAGCGTGCTGTAGATGATCCTATCAGGGAAATGGAAGGGAT 3160
Query 3095 GCTTGTTGATGAGTATGGCAGCAATGCAACATTTCAGCTGCCTGGGtttttttCATCTCA 3154
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 3161 GCTTGTTGATGAGTATGGCAGCAATGCAACGTTTCAGCTGCCAGGGTTTTTTTCATCTCA 3220
Query 3155 TAATTTTGAAGATGATGAAGAAGATGACGATCTTCCAACGTCACAAAAAGCAAAAAGAAC 3214
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||
Sbjct 3221 TAATTTTGAAGATGATGAAGAAGATGACGATCTTCCAACATCACAAAAAGAAAAAAGCAC 3280
Query 3215 ATCTGCGGGGGAGCGTTTCAATGTTTTAGACGACCTGGAAATACATGATATTTCGAGTGA 3274
|||||||||||| ||| ||| || |||||||||||||||||||||||||| ||||||||
Sbjct 3281 ATCTGCGGGGGAACGTGTCAGTGCTTTAGACGACCTGGAAATACATGATACCTCGAGTGA 3340
Query 3275 TAAATGCCATCGAGTTTTGGAGGATGTAGATCATGAACTGGAAATGGAAGATGTATCTGG 3334
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||
Sbjct 3341 TAAATGCCATCGAGTTTTGGAGGATGTCGATCATGAACTTGAAATGGAAGATGTATCAGG 3400
Query 3335 CCAGCGGAAAGATGTAGCACCTTCCTCTTTGC-GTGAGAATGAGACA--G-AGCAGTCAC 3390
|||||||||||||||||||||||||||||| | |||||||| ||||| | |||| ||||
Sbjct 3401 CCAGCGGAAAGATGTAGCACCTTCCTCTTT-CTGTGAGAATAAGACAAAGGAGCAATCAC 3459
Query 3391 TGGATGTTATGGAACCAGTTGCAGAAAAATTAACTGAGGTCAATCCTCTTCCAGAGGATT 3450
|||||||||||||||| ||||||||||||| ||| ||| |||||||||||||||||||||
Sbjct 3460 TGGATGTTATGGAACCTGTTGCAGAAAAATCAACCGAGTTCAATCCTCTTCCAGAGGATT 3519
Query 3451 CTCCTCCGCTACCTCACGAATCacctccatctac-ccctcctctaccaccttctccccca 3509
|||||||||||||||| ||||||||||| || | |||||||||||||||||||||||||
Sbjct 3520 CTCCTCCGCTACCTCAGGAATCACCTCCCCCT-CTCCCTCCTCTACCACCTTCTCCCCCA 3578
Query 3510 cctccatcccctcctcctccgccgtcatctccgcctccaTTACTGCCACCACCGCCCCCC 3569
|||||||||||||||| ||| | | |||| || | |||||||||||||| |||
Sbjct 3579 CCTCCATCCCCTCCTC-TCC-C-GCCATCA-----TC--T--CTGCCACCACCGCCTCCC 3626
Query 3570 GCAGCGCACTTCCCACCTCTTTCC-CCACCTCAGTCTCAgcctccaccaccaccgcccct 3628
||||||| |||||||||||| || ||||||| |||||||||||| |||||||| | |
Sbjct 3627 GCAGCGCTGTTCCCACCTCTT-CCACCACCTCCGTCTCAGCCTCCTCCACCACCAC---T 3682
Query 3629 ttcacctccgccttcaccgccgcctccacctccacctccttcacAATCTATAGCTTTTTC 3688
||||||||| |||||||||||||||||||||||||| ||||||||||| || | |
Sbjct 3683 TTCACCTCCACCTTCACCGCCGCCTCCACCTCCACCGCCTTCACAATC-AT---TAA--C 3736
Query 3689 AGCATCATTAACAACTCAACAATCCATAGCTGGCCACCATCAGTTACCATTTCAACCAGG 3748
| | | | |||||| ||||||||| |||| |||||| ||||||||||||||||
Sbjct 3737 A--A-C-T---CAACTC-----TCCATAGCTAGCCATCATCAGATACCATTTCAACCAGG 3784
Query 3749 ATTTCCTCCCCCAGCATATCCTCTATCGCATCAAACATACCCAGGATCTATGCAGCAAGA 3808
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3785 ATTTCCTCCCCCAACATATCCTTTATCGCATCAAACATACCCAGGATCTATGCAGCAAGA 3844
Query 3809 CCGCTGTAGTATTTTCACTGGTGATCAAATTGTCCAAGGGCCTGGAAATTC---ACGTGG 3865
||||| |||||||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct 3845 CCGCTCTAGTATTTTCACCGGTGATCAAATTGTCCAGGGGCCTGGAAATTCTTCACGTGG 3904
Query 3866 AAGTCATGTTGAGGGTGCTGGAAAACCCGAATATTTTGTGCAACAGTCATCTAGTTTTTC 3925
| ||| ||||||||| |||||||||||||||||||||||||| ||||| || ||||||||
Sbjct 3905 AGGTCTTGTTGAGGGCGCTGGAAAACCCGAATATTTTGTGCAGCAGTCCTCCAGTTTTTC 3964
Query 3926 ACCAGCAGGAGTGTGCAGCTCCAGGGAACCTTCATCATTTACTTCCTCCAGACAACTAGA 3985
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3965 ACCAGCAGGAGTGTGCAGCTCCAGGGAGCCTTCATCATTTACTTCCTCCAGACAACTAGA 4024
Query 3986 ATTTGGGAGCAGCGATGTACTTTTTAATCCTGATGCTTCTTCACAGAACCATCGGTTTCA 4045
|||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 4025 ATTTGGGAACAGCGATGTACTTTTCAATCCTGAAGCTTCTTCACAGAACCATCGGTTTCA 4084
Query 4046 GCCGAGCACCCCTCTATCCCAAAGACCTATGGTTAGGCTGCCTTCAGCACCGTCCAGTCA 4105
||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 4085 GCCGAGCACCCCTCTGTCCCAAAGACCTATGGTTAGGTTGCCTTCAGCACCGTCCAGTCA 4144
Query 4106 TTTTTCGTATCCAAGCCATGTTCAATCACAATCTCAGCATTCCTACACTCATCCTTACTC 4165
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 4145 TTTTTCGTATCCAAGCCATATTCAATCACAATCTCAGCATTCCTACACTCATCCTTACCC 4204
Query 4166 TTTCCCACCTCAACGTGATGATGGACGGCGATACAGAAATGAGGAACCATGGAGGATTCC 4225
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct 4205 TTTCCCACCTCAACGTGATGATGCACGGCGATACAGAAATGAGGAACCATGGCGGATTCC 4264
Query 4226 TTCAAGTGGAAATAGTGCAGAAAATCAGAGTGGTGCCTGGATACGTGGAAGAAATTCACA 4285
|||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 4265 TTCAAGTGGACATAGTGCAGAAAATCAGAATGGTGCCTGGATACATGGAAGAAATTCACA 4324
Query 4286 TCCAGGCCTTCCTAGAGTCACAGATGGTTTCTTTCGGCCACCTCCAGAACGTCCACCTTC 4345
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 4325 TCCAGGCCTTCCTAGAGTCACAGACAGTTTCTTTCGGCCACCTCCAGAACGTCCACCTTC 4384
Query 4346 AGGGACAATGAACTATCAACCTTCTGCTGCTAGTAACTTACAAGCTGCCCCTGCAATTCC 4405
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct 4385 AGGGACAATGAACTATCAGCCTTCTGCTGCTAGTAACTTACAAGCTGTCCCTGCAATTCC 4444
Query 4406 AGGTCATGCTGCTCCCCAGATGCTACCATCTCGGCCAGATATACCTACCGTGAATTGTTG 4465
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 4445 AGGTCATACTGCTCCCCAGATGCTACCGTCTCGGCCAGATATACCTACCGTGAATTGTTG 4504
Query 4466 GAGACCAGCTTGAAGTGAATGTAAAATTTTGTTGGCCTGCTCCTGTTAGTATCAATGGAA 4525
||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 4505 GAGGCCAGCTTGAAGTGAAGGTAGAATTTTGTTGGCCTGCTCCTGTTAGTATCAATGGAA 4564
Query 4526 AAGAAGCTGCTAGTGTCTCATTAACAAGGTTAATCCTCTAGGTTTGATTTTCTAAATACT 4585
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 4565 AAGAAGCTGCTAGTGTCTCATTAACAAGGTTAATCCTCTAGGTTTGGTTTTCTAAATACT 4624
Query 4586 AAAGTCAAGTCTTTTATCAGTGTTGTCATCAGACAGTTACAGTTATACTACTTTCTCTTC 4645
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 4625 AAAGTCAAGTCTTTTATCAGTGTTGTCATCAAACAGTTACAGTTATACTACTTTCTCTTC 4684
Query 4646 CATGGAGGACTTTTTCGGATATATCCACTTCCAGAGGCACAAAAACTACTGCAGGCTTTT 4705
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4685 CATGGAGGCCTTTTTCGGATATATCCACTTCCAGAGGCACAAAAACTACTGCAGGCTTTT 4744
Query 4706 GCCAGGATTCTGTATATTGTATTTTTT-CCTGACAAATGTATCTGTGGATCATATTCTTA 4764
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 4745 GCCAGGATTCTGTATATTGTATTTTTTTCCTGACAAATGTATCTGTGGATCATATTCTTA 4804
Query 4765 ACAGTATAGGTTCCTGtttttttATTGGTTAGTACTTCAGTTCCTGTAATTATGCCAATC 4824
||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 4805 ACAGTATAGGTTC-T-TTTTTT-ATTGGTTAGTACTTCAGTTCCTGTAATTATGCCAATC 4861
Query 4825 ACAATGTGCTCAAAGCTTTTACTGGAATGAAATTTGAACTTCATAGTCAAACATAGTGtt 4884
||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||| ||
Sbjct 4862 ACAATTTGCTCAAAGCTTTTACTGGAATGA--TTTGATCTTCATAGTCAAACATAGTTTT 4919
Query 4885 ttttt 4889
|||||
Sbjct 4920 TTTTT 4924
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 243911676866
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5