BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489219
Length=2207
Score E
Sequences producing significant alignments: (Bits) Value
AT5G23575.1 | Symbols: | Transmembrane CLPTM1 family protein |... 3264 0.0
AT5G08500.1 | Symbols: | Transmembrane CLPTM1 family protein |... 1877 0.0
> AT5G23575.1 | Symbols: | Transmembrane CLPTM1 family protein
| chr5:7946310-7950253 FORWARD LENGTH=2247
Length=2247
Score = 3264 bits (1767), Expect = 0.0
Identities = 2093/2239 (93%), Gaps = 68/2239 (3%)
Strand=Plus/Plus
Query 1 AACACTTCTACTTGAATTGCATTGGAAGAGCA---T--CG--T-CAT----C--A-ATCT 45
||||||||||||||||| |||||||||||||| | || | ||| | | || |
Sbjct 1 AACACTTCTACTTGAATCGCATTGGAAGAGCATCGTCACGACTCCATCACACTTATATAT 60
Query 46 TTTGTTTATTCAAATCTTCTTTCAGATTTTTTATATACaaaaaaataaaataaaataaa- 104
|||||||||||||||||||||||||| |||| ||||| ||||||| ||||| ||||
Sbjct 61 TTTGTTTATTCAAATCTTCTTTCAGA--TTTT-TATAC-AAAAAAT---ATAAATTAAAT 113
Query 105 aaaGGAATCCCATAAATATCTCTCTATAGAA----CTCTGCTTTT-----T-TACA-AA- 152
||| ||||||||||||||||||||||| ||| |||||||||| | | || ||
Sbjct 114 AAA-GAATCCCATAAATATCTCTCTATCGAACTCTCTCTGCTTTTACAAATCT-CAGAAT 171
Query 153 -T-C-T---C--A-TCACATCTCAGCTGCTTTTGAATCCGCCGTCTCGAAAACCAATCCT 203
| | | | | |||||||||||||||||||||||||||||| | |||| |||||||
Sbjct 172 CTCCTTCAGCGAATTCACATCTCAGCTGCTTTTGAATCCGCCGTAACTAAAAACAATCCT 231
Query 204 CC--TTCTCGATTCG-TGAACTATGGCCCCGCCGGCAGGACAAACGGCGGCGGTGGCTGA 260
|| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 232 CCTTTTCTCGATTCGTTAAACTATGGCCCCGCCGGCAGGACAAACGGCGGCGGTGGCTGA 291
Query 261 AGCGGCTGGCGCCGATGGTGCTCAACCGCAGCAGCAGCGTGGATTTGGTTCCACGATTTC 320
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 292 AGCGGCTGGCGCCGATGGTGCTCCACCGCAGCAGCAGCGTGGATTTGGTTCCACGATTTC 351
Query 321 CGGAATCGTTAGAATCGCCGTCTTTTGGTATTTTGCTTCCAAGTTCTTTTCACCTAAACA 380
||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||
Sbjct 352 CGGCATCGTTAGAATCGCCGTCTTTTGGTATTTTGCTTCTAAGTTCTTTTCTCCTAAGCA 411
Query 381 GAAACCTATGGATCCCTCTGCTCCGTCTCAGCTCATGACCAATCTCTTCCACAAGGGCGA 440
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 412 GAAACCTATGGATCCCACTGCTCCGTCTCAGCTCATGACTAATCTCTTCCACAAGGGCGA 471
Query 441 ATCATTGGATATGTGGTTTTATCTCTCAGAGCATGAGAAGTTCAATGACTTTGGCAATGA 500
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 472 ATCATTGGATATGTGGTTTTATCTATCAGAGCAGGAGAAGTTCAATGACTTTGGCAATGA 531
Query 501 TCGTGCGCTTTATTGGCATGAGACCAATATACCTTATGCTGTATGGACACCAGAGAGTAT 560
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 532 TCGTGCGCTATATTGGCATGAGACGAATATACCTTATGCTGTATGGACACCAGAGAGTAT 591
Query 561 TAGGACCAAGTCACTGACGTATTATCCATCTGAGACACTACAGAATAATGGAAGTCTGTA 620
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 TAGGACCAAGTCACTTACGTATTATCCATCTGAGACACTACAGAATAATGGAAGTCTGTA 651
Query 621 TGCTCATGTCTTTTTTGCTCGGTCTGGATTTCCCATAGACCCTAATGATCCTGAATACCA 680
||||||| ||||||||||||| |||||||||||||| ||||| | |||||||||||| ||
Sbjct 652 TGCTCATATCTTTTTTGCTCGATCTGGATTTCCCATTGACCCCACTGATCCTGAATATCA 711
Query 681 ACCTCTTAATAGTTTTAGCAGGACACATGCTGTGGCGACTTACTTTCCAAAGCA-AAAGA 739
|||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| |
Sbjct 712 ACCTCTTAATAGTTTTAGTAGGACGCATGCTGTGGCGACTTACTTTCCAAAGCAGAAA-A 770
Query 740 AAAATAAGAAGAAGAGTCTCTTGGGAAGTCCCAAAGACTCTGATGAATCCGAGCGTGAAG 799
||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||
Sbjct 771 AAAATAAGAAGAAGAGTCTCTTGGGCAGTCCCAAAGACTCTGATGAATCCGAACCTGAAG 830
Query 800 TTGAGAAAGTTGGAGATAAGAAATCCGATCCCAAGGAAGAGGTCCCTGTGGAATGGATAT 859
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 831 TTGAGAAAGTTGGAGATAAGAAATCAGATCCCAAGGAAGAGGTCCCTGTGGAATGGATAT 890
Query 860 CCCTCTGGAAACCTAATGTCACGATTAACCTGGTTGATGATTTTACTCGCTATTCACAAA 919
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 891 CCCTCTGGAAACCTAATGTCACGATTAACCTGGTTGATGATTTTACTCACTATTCACAGA 950
Query 920 ATGGTGTACCACCAAATATTGCTCCTCACTTACTGGTAGAACCTACCACAGGAAATTACT 979
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 951 ATGGTGTACCACCAAACATTGCTCCTCACTTACTGGTAGAACCGACCACAGGAAATTACT 1010
Query 980 ATCCTACAATTTACTTCAATGAGTTTTGGCTGCTAAGGGACAAATTCATTCCAGTCAATG 1039
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1011 ATCCTACAATTTACTTCAATGAGTTTTGGCTGCTAAGGGACAAGTTCATTCCAGTCAATG 1070
Query 1040 AGACAGTCTCAGAACTACCACTCAATCTGGAAATAAGCCCCATAAGCATGATGAAGTGGC 1099
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 1071 AGACAGTCTCAGAACTACCACTAAATCTGGAAATAAGTCCCATAAGCATGATGAAGTGGC 1130
Query 1100 AACTGTTTCAGCAAGTCGATCAGTCTTTCCAGATGCAGCGTAGCTATGGAAGCATGCTTG 1159
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1131 AACTGTTTCAGCAAGTTGATCAATCTTTCCAGATGCAGCGTAGCTATGGAAGCATGCTTG 1190
Query 1160 ATGGTGAATCTGACGAACTAAAGAGGGTGTTTTTGGAAGGAAATCCCTATCTCTTGGGTA 1219
| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct 1191 ACGGTGAATCTGACGAACTAAAGAAGGTGTTTTTGGAAGGAAATCCCTATCTTTTGGGGA 1250
Query 1220 TCACGATGTTTGTTTCGATGCTTCATTCAGTGTTCGACTTCCTGGCATTCAAAAATGATA 1279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1251 TCACGATGTTTGTTTCGATGCTTCATTCAGTGTTCGACTTCCTGGCATTCAAAAATGATA 1310
Query 1280 TCCAATTCTGGAACAAAAACAAATCAATGGAAGGACTGTCTGCAAAGTCTGTTGTACTGA 1339
||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct 1311 TCCAATTCTGGAACAAAAATAAATCTATGGAAGGGCTGTCTGCAAAGTCTGTTGTACTGA 1370
Query 1340 ACTTTATCTGTCAGTTTGTCATCTTCCTCTACCTGCTTGACAACGACACTTCATGGATGA 1399
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1371 ACTTTATCTGTCAGTTTGTCATCTTCCTCTACTTGCTTGACAACGACACTTCATGGATGA 1430
Query 1400 TACTGGCTAGTTCTGGAGTCGGTGTCTGCATTGAGTTCTGGAAAATAGGGAAAGCCATGC 1459
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1431 TACTGGCTAGTTCCGGAGTCGGTGTCTGCATTGAGTTCTGGAAAATAGGGAAAGCCATGC 1490
Query 1460 GTATAGAGGTTGATCGAAGTGGAATGATTCCAAGGTTGAGGTTCCACGATCGTGAATCCT 1519
| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 1491 GCATAGAGGTTGATCGAAGTGGAATGATTCCAAGGTTGAGGTTCCATGATCGTGAATCGT 1550
Query 1520 ATGCAAGCAATAAAACCAAGGAGTATGATGACATTGCCATCAAATTCTTATCCTATGTGC 1579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1551 ATGCAAGCAATAAAACCAAGGAGTATGATGACATTGCCATCAAATTCTTATCCTATGTGC 1610
Query 1580 TCCTCCTCCTTGTCATTGGCTTATCTATATATTCTCTCGCCTATGAACGCCACAAGAGCT 1639
|||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||
Sbjct 1611 TCCTCCTCCTTGTCATTGGCTTGTCCATATATTCTCTCGCTTATGAACGCCACAAGAGCT 1670
Query 1640 GGTATTCTTGGATCCTGTCTTCACTAACAAGCTGTGTCTACATGTTTGGTTTCATCATGA 1699
||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1671 GGTATTCTTGGATACTATCTTCACTAACAAGCTGTGTCTACATGTTCGGTTTCATCATGA 1730
Query 1700 TGTGTCCTCAGCTATTCATCAACTATAAGCTAAAATCAGTGGCACATTTACCATGGAGAC 1759
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 1731 TGTGTCCTCAGCTATTCATCAACTACAAGCTTAAATCAGTGGCACATTTACCATGGAGAC 1790
Query 1760 AGATGACTTACAAGTTCCTCAACACCATTATCGACGATCTTTTTGCCTTTGTCATCAAAA 1819
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1791 AGATGACTTACAAGTTCCTCAACACCATTATCGACGATCTCTTTGCCTTTGTCATCAAAA 1850
Query 1820 TGCCGATTCTACATCGACTTTCTGTATTCCGAGATGATGTGATATTCTTGATATACTTAT 1879
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1851 TGCCGATTTTACATCGACTTTCTGTATTCAGAGATGATGTGATATTCTTGATATACTTAT 1910
Query 1880 ACCAAAGGTGGGTTTACCCTGTGGACAAGACACGTGTTAACGAGTTCGGTTTTGGAGGTG 1939
||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1911 ACCAAAGGTGGGTTTACCCAGTGGATAAGACACGTGTGAACGAGTTCGGTTTTGGAGGTG 1970
Query 1940 AGGATGAAACTGCagagaagaagttgatcactgagaaagaagaagaagacaagaaAACAA 1999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1971 AGGATGAAACTGCAGAGAAGAAGTTGATCACTGAGAAAGAAGAAGAAGACAAGAAAACAA 2030
Query 2000 ACTAATCTCTTCTCTTCTTCCAGTTTTACAACAGTTCAGTTATAGTTTCTTAATTTATTT 2059
|||||||||||||||||||| | ||||| |||||||||||||||| |||||||||||||
Sbjct 2031 ACTAATCTCTTCTCTTCTTCAAATTTTATTACAGTTCAGTTATAGTGTCTTAATTTATTT 2090
Query 2060 TTGTTCTCACTTTAG----TTGTTTTGTTACAAGTTTAATGTCAACTTTCAAGACACATT 2115
||||||||||||| | |||||||||| |||||||||||||||| ||||||||||||
Sbjct 2091 TTGTTCTCACTTTTGGAAATTGTTTTGTT-CAAGTTTAATGTCAACCCTCAAGACACATT 2149
Query 2116 ATAAAACAACTCCTTTGGAtttttt-tGAAAGaa--aaaaaaa-aaCATTTT----A--G 2165
|| || |||||||||||| |||||| ||||| || ||||||| |||||||| | |
Sbjct 2150 ATTAAGCAACTCCTTTGG-TTTTTTGTGAAA-AAGGAAAAAAACAACATTTTCTCTAAAG 2207
Query 2166 CTCTGAGATATGGTAAAAT 2184
|||||||||||||||||||
Sbjct 2208 CTCTGAGATATGGTAAAAT 2226
> AT5G08500.1 | Symbols: | Transmembrane CLPTM1 family protein
| chr5:2748193-2751771 FORWARD LENGTH=2022
Length=2022
Score = 1877 bits (1016), Expect = 0.0
Identities = 1479/1703 (87%), Gaps = 29/1703 (2%)
Strand=Plus/Plus
Query 316 ATTTCCGGAATCGTTAGAATCGCCGTCTTTTGGTATTTTGCTTCCAAGTTCTTTTCACCT 375
||| |||||||| | |||||||||||||| || || |||||||| ||||||||||| ||
Sbjct 156 ATTACCGGAATCATAAGAATCGCCGTCTTCTGTTACTTTGCTTCTAAGTTCTTTTCTCCC 215
Query 376 AAACAGAAACCTATGGATCCCTCTGCTCCGT-CTCAGCTCATGACCAATCTCTTCCACAA 434
||||| |||||| |||||| || || | |||| |||||| ||||||| || || |
Sbjct 216 AAACAAAAACCTGCGGATCCTTCCAAGCC-TACTCATCTCATGTCCAATCTATTTCAGAG 274
Query 435 GGGCGA-ATCATTGGATATGTGGTTTTATCTCTCAGAGCATGAGAAGTTCAATGACTTTG 493
|||||| || | ||||||||||||||||| || ||||||||||| ||||||||||| |
Sbjct 275 GGGCGAGCCCA-TAGATATGTGGTTTTATCTTTCGGAGCATGAGAAATTCAATGACTTCG 333
Query 494 GCAATGATCGTGCGCTTTA-TTGGCATGAGACCAATATACCTTATGCTGTATGGACACCA 552
||||||| |||||| ||| |||||||||||| || |||||||||||||| |||| ||||
Sbjct 334 GCAATGAAGGTGCGC-TTATTTGGCATGAGACAAACATACCTTATGCTGTGTGGAAACCA 392
Query 553 GAGAGTATTAGGACCAAGTCACTGACGTATTATCCATCTGAGACACT-ACAGAATAATGG 611
||||| | ||||||| |||| ||||||| ||||| || ||| |||| | ||||||||||
Sbjct 393 GAGAGCACTAGGACCTTGTCAATGACGTACTATCCTTCCGAGGCACTGA-AGAATAATGG 451
Query 612 AAGTCTGTATGCTCATGTCTTTTTTGCTCGGTCTGGATT-TCCCATAGACCCTAATGATC 670
||||||||||||||||||||| ||||||| ||||| || ||| ||||| | || |||||
Sbjct 452 AAGTCTGTATGCTCATGTCTTCTTTGCTCTATCTGG-TTATCCTATAGATCTTAGTGATC 510
Query 671 CTGAATACCAACCTCTTAA-TAGTTTTAGCAGGACACATGCTGTGGCGACTTACTTTCCA 729
|||||||||| ||||| || | | ||| ||||||| || |||| || |||||||| |||
Sbjct 511 CTGAATACCAGCCTCTCAACT-GCTTTGGCAGGACTCACCCTGTTGCAACTTACTTACCA 569
Query 730 AAGC-AAAAGAAAAATAAGAAGAAGAGTCTCTTGGGAAGTCCCAAAGACTCTGATGAATC 788
|||| ||||| | |||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct 570 AAGCGAAAAG-CAGATAAGAAGAAGAGTCTGTTGGGAAATCCCAAAGACTCTGATGAATC 628
Query 789 CGAGCGT-GAAGTTGAGAAAGTTGGA-GATAAGAAATCCGATCCCAAGGAAGAGGTCCCT 846
| | || ||||||||| | ||| || | |||| | || |||| |||||| |||| ||||
Sbjct 629 CCA-TGTGGAAGTTGAGGAGGTT-GATGGTAAGGACTCGGATCTCAAGGATGAGGGCCCT 686
Query 847 GTGGAATGGATATCCCT-CTGGAAACCTAATGTCACGATTAACCTGGTTGATGATTTTAC 905
||||||||| ||| ||| ||||||||| |||||||| |||||||| || ||||| |||||
Sbjct 687 GTGGAATGGGTAT-CCTACTGGAAACCAAATGTCACAATTAACCTAGTCGATGACTTTAC 745
Query 906 TCGCTATTCACAAAATGGTGTACCACCAAATATTGCTCCTCACTTACTGGTAGAACCTAC 965
||||||| |||| |||||||||||||||| ||| |||| |||||||||| |||||||
Sbjct 746 TCGCTATCCACAGCATGGTGTACCACCAAACATTTATCCTTACTTACTGGTGGAACCTAG 805
Query 966 CACAGGAAATTACTATCCTACAATTTACTTCAATGAGTTTTGGCTGCTAAGGGACAAATT 1025
||| ||| ||||| |||||| ||| |||||||||||||||| ||||||||||||| ||
Sbjct 806 TACAATAAACTACTACCCTACAGTTTTCTTCAATGAGTTTTGGTTGCTAAGGGACAAGTT 865
Query 1026 CATTCCAGTCAATGAGACAGTCTCAGAACTACCACTCAATCTGGAAATAAGCCCCATAAG 1085
||| | |||||||||| |||||||| || ||||| ||||||||| |||||||||||||
Sbjct 866 GATTTTAATCAATGAGACGGTCTCAGAGCTGCCACTTAATCTGGAAGTAAGCCCCATAAG 925
Query 1086 CATGATGAAGTGGCAACTGTTTCAGCAAG-TCGATCAGTCTTTCCAGATGCAGCGTAGCT 1144
||||| |||||||| |||||||||| || | ||||||||||||||||| || |||||||
Sbjct 926 CATGACAAAGTGGCAGCTGTTTCAGC-AGATTGATCAGTCTTTCCAGATTCACCGTAGCT 984
Query 1145 ATGGAAGCATGCTTGATGGTGAATCTGACGAACTAAAGAGGGTGTTTTTGGAAGGAAATC 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 985 ATGGAAGCATGCTTGATGGTGAATCTGACGAACTAAAGAGGGTGTTTTTGGAAGGAAATC 1044
Query 1205 CCTATCTCTTGGGTATCACGATGTTTGTTTCGATGCTTCATTCAGTGTTCGACTTCCTGG 1264
||||||| ||||| |||| ||||||||||||||||||||||| || ||||||||||| |
Sbjct 1045 CCTATCTGTTGGGCGTCACTATGTTTGTTTCGATGCTTCATTCTGTATTCGACTTCCTTG 1104
Query 1265 CATTCAAAAATGATATCCAATTCTGGAACAAAAACAAATCAATGGAAGGACTGTCTGCAA 1324
||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||| |
Sbjct 1105 CATTCAAAAATGATATCCAGTTTTGGAACAAGAACAAATCTATGGAAGGACTGTCTGCGA 1164
Query 1325 AGTCTGTTGTACTGAACTTTATCTGTCAGTTTGTCATCTTCCTCTACCTGCTTGACAACG 1384
||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1165 AGTCTGTCGTACTAAACTTTATCTGTCAGTTTATCATCTTCCTCTACCTGCTTGACAACG 1224
Query 1385 ACACTTCATGGATGATACTGGCTAGTTCTGGAGTCGGTGTCTGCATTGAGTTCTGGAAAA 1444
||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||
Sbjct 1225 ACACTTCATGGATGATACTGGCTAGCTCTGGAGTTGGTGTCTGCATCGAGTTCTGGAAAA 1284
Query 1445 TAGGGAAAGCCATGCGTATAGAGGTTGATCGAAGTGGAATGATTCCAAGGTTGAGGTTCC 1504
| |||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1285 TTGGGAAAGCCATGCGCATTGAGGTTGATCGAAGTGGGATGATTCCAAGATTGAGGTTCC 1344
Query 1505 ACGATCGTGAATCCTATGCAAGCAATAAAACCAAGGAGTATGATGACATTGCCATCAAAT 1564
|||| |||||||||||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct 1345 ACGACCGTGAATCCTATGCAAGCAACAAGACCAAGGAGTATGACGACATTGCCATCAAAT 1404
Query 1565 TCTTATCCTATGTGCTCCTCCTCCTTGTCATTGGCTTATCTATATATTCTCTCGCCTATG 1624
|||||||||||||||||||||| ||||| | || || || |||||||| || |||||||
Sbjct 1405 TCTTATCCTATGTGCTCCTCCTTCTTGTTGTGGGTTTCTCCATATATTCACTTGCCTATG 1464
Query 1625 AACGCCACAAGAGCTGGTATTCTTGGATCCTGTCTTCACTAACAAGCTGTGTCTACATGT 1684
||||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||
Sbjct 1465 AACGCCACAAGAGCTGGTACTCATGGATCCTATCTTCACTAACGAGCTGCGTCTACATGT 1524
Query 1685 TTGGTTTCATCATGATGTGTCCTCAGCTATTCATCAACTATAAGCTAAAATCAGTGGCAC 1744
|||||||||| |||||||||||||| | ||||||||||||||||| || ||||| ||||
Sbjct 1525 TTGGTTTCATAATGATGTGTCCTCAATTGTTCATCAACTATAAGCTGAAGTCAGTAGCAC 1584
Query 1745 ATTTACCATGGAGACAGATGACTTACAAGTTCCTCAACACCATTATCGACGATCTTTTTG 1804
||||||||||||| || ||||| || |||||||||||||| || ||||||||||| ||||
Sbjct 1585 ATTTACCATGGAGGCAAATGACATATAAGTTCCTCAACACAATCATCGACGATCTCTTTG 1644
Query 1805 CCTTTGTCATCAAAATGCCGAT-TCTACATCGACTTTCTGTATTCCGAGATGATGTGATA 1863
| ||||||||||||||||| || | | ||||| |||||||| ||||||||||||||||||
Sbjct 1645 CTTTTGTCATCAAAATGCCAATGT-TGCATCGCCTTTCTGTCTTCCGAGATGATGTGATA 1703
Query 1864 TTCTTGATATACTTATACCAAAGGTGGGTTTACCCTGTGGACAAGACACGTGTTAACGAG 1923
||||| |||||||| ||||| || |||||||| ||||||||||| |||||||| ||||||
Sbjct 1704 TTCTTAATATACTTGTACCAGAGATGGGTTTATCCTGTGGACAAAACACGTGTCAACGAG 1763
Query 1924 TTCGGTTTTGGAGGTGAGGATGAAACTGCagaga-agaagttgatcactgagaaagaaga 1982
|| |||||||||||||||||||| ||| || | | ||| |||| |||| |||||||
Sbjct 1764 TTTGGTTTTGGAGGTGAGGATGAGTCTGTGGATACA-AAGAAGATCTCTGACCAAGAAGA 1822
Query 1983 agaagacaagaaAACAAACTAAT 2005
|| |||||||||||||||||
Sbjct 1823 TGA---CAAGAAAACAAACTAAT 1842
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 109487388645
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5