BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489227
Length=1905
Score E
Sequences producing significant alignments: (Bits) Value
AT5G23670.1 | Symbols: LCB2 | long chain base2 | chr5:7981641-7... 2850 0.0
AT3G48780.1 | Symbols: ATSPT1, SPT1 | serine palmitoyltransfera... 1664 0.0
AT3G48790.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent t... 889 0.0
> AT5G23670.1 | Symbols: LCB2 | long chain base2 | chr5:7981641-7985391
FORWARD LENGTH=2072
Length=2072
Score = 2850 bits (1543), Expect = 0.0
Identities = 1821/1947 (94%), Gaps = 51/1947 (3%)
Strand=Plus/Plus
Query 1 AAAAAA-TAAAGCAAATGGTTTTATGATCCGATTCCTTCTCAATCTCACGGAGGGGAAAA 59
|||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3 AAAAAAGAAAAG-AAATGGTTTTATGATCCGATCCCTTCTCAATCTCACGGAGGGGAAAA 61
Query 60 GA-T--TCCAATTCAAA------------TCTCTATCTCTCAACTTTCAATTTCTGAGAG 104
|| | ||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 62 GATTCCTCCAATTCAAATCTCTGTCTGTGTCTCTGTCTCTCAACTTTCAATTTCTGAGAG 121
Query 105 AGTCGGAAAAATTCTCCAGATCTCCT--CGCTAAATTCGTTTTCCGATTCGGCCTAGCGA 162
||||||||| |||||||||||| ||| || ||||||||||||||||||||||||||||
Sbjct 122 AGTCGGAAATATTCTCCAGATCGCCTAAGGC-AAATTCGTTTTCCGATTCGGCCTAGCGA 180
Query 163 CGGCgagagagagaggagagaggaagagGCAAGTTGATTGACCGGAGAAG-A-A-G-A-- 216
|||| |||||| | ||||||||||||||||||||||||||||||||| | | | |
Sbjct 181 CGGC----GAGAGA-G-GAGAGGAAGAGGCAAGTTGATTGACCGGAGAAGAAGACGAAGC 234
Query 217 ----C--GGAAAAAATGATAACGATCCCTTATCTAACCGCTGTATCGACCTACTTCAGCT 270
| ||| |||||||||||||| |||||| ||||||||||||| |||||||||||||
Sbjct 235 CGTTCTTGGAGAAAATGATAACGATTCCTTATTTAACCGCTGTATCCACCTACTTCAGCT 294
Query 271 ACGGATTGCTCTTTGCTTTTGGCCAGCTCCGTGATTTCTTCCGCCGCTTCATTGATTGGT 330
| |||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||
Sbjct 295 ATGGATTGCTCTTTGCTTTTGGTCAGCTCCGAGATTTCTTCCGTCGCTTCATTGATTGGT 354
Query 331 GGCTCACTAGCAATCTCCAGGGATACGCGCCGATCTGTTTGGGGCATGAGGATTTTTATA 390
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 355 GGTTCACTAGCAATCTCCAGGGATACGCGCCGATCTGTTTGGGGCATGAGGATTTCTATA 414
Query 391 TTAGGCGATTGTATCATCGGATTCAGGATTGTTTTGAACGACCTATATCGAGTGCACCTG 450
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 TCAGGCGATTGTATCATCGGATTCAGGATTGTTTTGAACGACCTATATCGAGTGCACCTG 474
Query 451 ATGCTTGGTTTGATGTCGTCGAGCGTTACTCTAATGATAACAACAAGACGCTTAAGCGAA 510
|||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||||
Sbjct 475 ATGCTTGGTTTGATGTGGTTGAGCGCTACTCTAATGACAACAACAAGACGCTTAAGCGAA 534
Query 511 CAACAAAGACTAGCAGGTGCCTCAATTTGGGGTCCTACAATTATCTTGGGTTTGGTTCTT 570
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 535 CAACAAAAACTAGCAGGTGCCTCAATTTGGGGTCCTACAATTATCTTGGGTTTGGTTCTT 594
Query 571 TTGATGAATATTGCACGCCTCGTGTTATTGAGTCCTTGAAGAAATTTTCAGCAAGTACAT 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595 TTGATGAATATTGCACGCCTCGTGTTATTGAGTCCTTGAAGAAATTTTCAGCAAGTACAT 654
Query 631 GTAGCTCTCGTGTCGATGCAGGAACTACATCAGTGCATGCAGAACTTGAGGAATGTGTTA 690
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 655 GTAGCTCTCGTGTTGATGCAGGAACTACATCCGTGCATGCAGAACTTGAGGAATGTGTTA 714
Query 691 CTAGGTTTGTTGGAAAGCCTGCTGCTGTTGTTTTTGGCATGGGCTATGCAACAAACTCAG 750
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 715 CTAGGTTTGTGGGAAAGCCTGCTGCTGTTGTTTTTGGCATGGGCTATGCAACAAATTCGG 774
Query 751 CTATCATTCCAGTCCTGATTGGAAAGGGAGGGTTGATAATAAGTGATTCCTTGAACCATA 810
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 775 CTATCATTCCAGTCTTGATTGGAAAGGGAGGGTTGATAATAAGTGATTCTTTGAACCATA 834
Query 811 GTTCGATTGTCAATGGTGCTCGAGGTTCAGGAGCCACTATCCGTGTTTTCCAGCATAACA 870
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 835 GTTCTATTGTCAATGGTGCTCGAGGTTCTGGAGCCACTATCCGTGTTTTCCAGCATAACA 894
Query 871 CACCTTCCCATTTGGAACGAGTTTTGAGAGAACAAATTGCAGAAGGTCAACCTAGGACAC 930
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 895 CGCCTTCCCATTTGGAACGAGTTTTGAGAGAACAAATTGCAGAAGGTCAACCTAGGACAC 954
Query 931 ATCGACCATGGAAGAAAATTATTGTTGTTGTTGAAGGTATTTACAGCATGGAAGGGGAGA 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 ATCGACCATGGAAGAAAATTATTGTTGTTGTTGAAGGTATTTACAGCATGGAAGGGGAGA 1014
Query 991 TTTGTCATCTGCCCGAAGTTGTCGCCATATGCAAGAAGTATAAGGCATATGTTTACTTGG 1050
|||||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 1015 TTTGTCATCTACCGGAAGTTGTGGCCATATGCAAGAAGTATAAGGCATATGTTTATTTGG 1074
Query 1051 ATGAGGCTCACAGCATTGGGGCAATTGGTGAAACAGGAAAGGGTATCTGTGAACTCCTGG 1110
|||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct 1075 ATGAAGCTCACAGCATTGGGGCAATTGGTAAAACAGGAAAGGGTATTTGTGAACTCCTGG 1134
Query 1111 GAGTTGACACAGCTGATGTGGACGTAATGATGGGAACCTTCACAAAATCTTTTGGGTCTT 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1135 GAGTTGACACAGCTGATGTGGACGTAATGATGGGAACCTTCACAAAATCTTTTGGGTCTT 1194
Query 1171 GTGGTGGCTATATTGCTGGATCTAAGGAGCTCATCCAATATTTGAAGCATCAATGCCCGG 1230
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1195 GTGGTGGCTATATTGCTGGATCTAAGGAGCTCATCCAATATTTGAAGCATCAATGCCCAG 1254
Query 1231 CTCACCTTTACGCAACATCCATACCAACTCCTTCCGCACAACAAATCATTTCTGCCATTA 1290
|||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 1255 CTCATCTTTACGCAACATCCATACCAACTCCTTCCGCACAACAAATTATATCTGCCATTA 1314
Query 1291 AAGTTATTCTGGGAGAGGATGGTTCAAACCGAGGAGCACAAAAGCTGGCAAGAATACGTG 1350
|||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||
Sbjct 1315 AAGTTATTCTGGGAGAGGATGGTTCAAATCGAGGGGCACAAAAGCTAGCAAGAATACGTG 1374
Query 1351 AGAACAGCAACTTTTTCCGGGCAGAGCTGCAGAAGATGGGATTTGAGGTACTTGGAGACA 1410
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1375 AGAACAGCAACTTTTTCCGGGCTGAGCTGCAGAAGATGGGATTTGAGGTACTTGGAGACA 1434
Query 1411 ATGATTCCCCAGTCATGCCAATAATGCTATACAACCCAGCAAAAATCCCAGCTTTCTCAA 1470
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 1435 ATGATTCCCCAGTCATGCCTATAATGCTTTACAACCCAGCAAAAATCCCAGCTTTCTCAA 1494
Query 1471 GAGAATGTCTGCGACAAAAAGTGGCAGTGGTGGTCGTGGGTTTCCCAGCTACACCTCTAC 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1495 GAGAATGTCTGCGACAAAAAGTGGCAGTGGTGGTCGTGGGTTTCCCAGCTACACCTCTAC 1554
Query 1531 TGCTGGCTAGGGCACGTATTTGCATTTCCGCATCTCATTCAAGAGAAGATCTTATAAGAG 1590
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1555 TGCTGGCTAGGGCACGTATTTGCATCTCCGCATCTCATTCAAGAGAAGATCTTATAAGAG 1614
Query 1591 CCCTCAAGGTTATAAGCAAAGTAGGTGACCTTAGCGGAATCAAATATTTCCCGGCAGAGC 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1615 CCCTCAAGGTTATAAGCAAAGTAGGTGACCTTAGCGGAATCAAATATTTCCCGGCAGAGC 1674
Query 1651 CGAGGAAGATAGAACAGTCAAAAAATGACATCAAGTTGGATTGAAGACTAAACAAATGAA 1710
||| ||| ||||||||||| ||||| ||||||||| ||||||||||| | ||| ||||||
Sbjct 1675 CGAAGAAAATAGAACAGTCGAAAAACGACATCAAGCTGGATTGAAGAATTAACCAATGAA 1734
Query 1711 ATAAAAGATGCATCCAGGAAAACGCAAGCAAATGCAGTTTTAAGTGTTAACTTCGGC-T- 1768
||| | ||||||||||||||||||||||||||||| || ||| ||||||||||| | |
Sbjct 1735 ATAGA-GATGCATCCAGGAAAACGCAAGCAAATGCTGTGTTATGTGTTAACTTCTCCATA 1793
Query 1769 TCAC----A-----CACAAATCTGATTTCTCAGGAGTCAAGTCATTTCCTCTCTAAGTAA 1819
|| | | |||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct 1794 TCTCTCTGATGTGACACAAATCTGATTTCTCAGGGGTCCAGCCATTTCCTCTCTAAGTAA 1853
Query 1820 ATCCCAA-CCCAGAGTTAGTCCACCTTTCCTGAAGTCTTGCTTACGATGATGCTACTGCA 1878
| | ||| ||||||||||||||||||||||| |||||||| |||| ||| ||||||||||
Sbjct 1854 AACACAAACCCAGAGTTAGTCCACCTTTCCTCAAGTCTTGTTTACCATGGTGCTACTGCA 1913
Query 1879 TTTATGTGATTCTTCTTCCATGTTTTT 1905
||||||||||||||| |||||||||||
Sbjct 1914 TTTATGTGATTCTTCATCCATGTTTTT 1940
> AT3G48780.1 | Symbols: ATSPT1, SPT1 | serine palmitoyltransferase
1 | chr3:18089061-18093088 FORWARD LENGTH=2420
Length=2420
Score = 1664 bits (901), Expect = 0.0
Identities = 1299/1490 (87%), Gaps = 32/1490 (2%)
Strand=Plus/Plus
Query 219 GAAAAAATGATAACGATCCCTTATCTAACCGCTGTATCGACCTACTTCAGCTACGGATTG 278
|||| |||||| |||||||| || || ||||||||||| || || ||||||||||| |||
Sbjct 280 GAAACAATGATTACGATCCCATACCTTACCGCTGTATCAACGTATTTCAGCTACGGCTTG 339
Query 279 CTCTTT-GCTTTTGGCCAGCTCCGTGATTTCTTC-CGCCGCTTCATT-GATTGGTGGCTC 335
|| ||| || ||||| ||||| || |||| | || |||| || || |||||||||| |
Sbjct 340 CT-TTTCGCGTTTGGTCAGCTTCGCGATTAC-TCTCGCCTAATC-TTCGATTGGTGGCGC 396
Query 336 ACTAGCAATCTCCAGGGATACGCGCCGATCTGTTTGGGGCATGAGGATTTTTATATTAGG 395
|| | |||||||||||||||||| |||||||| |||| |||||||||||| || || |
Sbjct 397 ACCAACAATCTCCAGGGATACGCTCCGATCTGCTTGGCGCATGAGGATTTCTACATCCGA 456
Query 396 CGATTGTATCATCGGATTCAGGATTGTTTTGAACGACCTATATCGAGTGCACCTGATGCT 455
||||||||||||||||||||||| ||||||| ||| || || || |||||||||||||||
Sbjct 457 CGATTGTATCATCGGATTCAGGACTGTTTTGGACGTCCCATTTCAAGTGCACCTGATGCT 516
Query 456 TGGTTTGATGTCGTCGAGCG-TTACTCTAATGATAACAACAAGACGCTT-AAGCGAACAA 513
||| ||||||| || ||| | | |||| | ||||||||||||||| || |||||||| |
Sbjct 517 TGGATTGATGTGGTTGAGAGAGT-CTCTGACGATAACAACAAGACG-TTAAAGCGAACTA 574
Query 514 CAAAGACTAGCAGGTGCCTCAATTTGGGGTCCTACAATTATCTTGGGTTTGGTTCTTTTG 573
||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| |
Sbjct 575 CAAAGACTAGCAGGTGCCTTAATTTGGGTTCCTACAATTATCTTGGATTTGGTTCTTTCG 634
Query 574 ATGAATATTGCACGCCTCGTGTTATTGAGTCCT-TGAAGAAATTTTCAGCAAGTACATGT 632
|||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||
Sbjct 635 ATGAATATTGCACGCCTCGTGTCATTGAGT-CTCTGAAGAAATTTTCAGCAAGTACATGT 693
Query 633 AGCTCTCGTGTCGATGCAGGAACTACATCAGTGCATGCAGAACTTGAGGAATGTGTTACT 692
|||||||| || ||||||||||||||||| |||||||||||||||||||| |||||| ||
Sbjct 694 AGCTCTCGCGTTGATGCAGGAACTACATCTGTGCATGCAGAACTTGAGGATTGTGTTGCT 753
Query 693 AGGTTTGTTGGA-AAGCCTGCTGCTGTTGTTTTTGGCATGGGCTATGCAACAAACTCAGC 751
| | ||| ||| || |||||||||||| ||||||||||||| |||||||||||||| ||
Sbjct 754 AAATATGTCGGACAA-CCTGCTGCTGTTATTTTTGGCATGGGTTATGCAACAAACTCGGC 812
Query 752 TATCATTCCAGTCCTGATTGGAAAGGGAGGGTTGATAATAAGTGATTCCTTGAACCATAG 811
||||||||| ||| |||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 813 TATCATTCCCGTCTTGATTGGAAAGGGAGGGTTGATAATAAGCGATTCTTTGAACCATAC 872
Query 812 TTCGATTGTCAATGGTGCTCGAGGTTCAGGAGCCACTATCCGTGTTTTCCAGCATAACAC 871
|||||||||||| || ||||||||||||||||| ||||||||||||||||| || |||||
Sbjct 873 TTCGATTGTCAACGGCGCTCGAGGTTCAGGAGCTACTATCCGTGTTTTCCAACACAACAC 932
Query 872 ACCTTCCCATTTGGAACGAGTTTTGAGAGAACAAATTGCAGAAGGTCAACCTAGGACACA 931
|||| ||| ||||| ||| |||| ||||||||| || || || ||||| ||||| ||
Sbjct 933 ACCTGGTCATCTGGAAAAAGTATTGAAAGAACAAATCGCCGAGGGACAACCCAGGACGCA 992
Query 932 TCGACCATGGAAGAAAATTATTGTTGTTGTTGAAGGTATTTACAGCATGGAAGGGGAGAT 991
| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 993 TAGACCGTGGAAGAAAATTATTGTTGTTGTTGAGGGTATTTACAGCATGGAAGGGGAAAT 1052
Query 992 TTGTCATCTGCCCGA-AGTTGTCGCCATATGCAAGAAGTATAAGGCATATGTTTACTTGG 1050
||||||||||||||| | |||| | ||||||||||||||||||||||||||||||||||
Sbjct 1053 TTGTCATCTGCCCGAGA-TTGTTTCAATATGCAAGAAGTATAAGGCATATGTTTACTTGG 1111
Query 1051 ATGAGGCTCACAGCATTGGGGCAATTGGTGAA-ACAGGAA-AGG-GTATCTGTGAACTCC 1107
| || |||||||||||||| |||||||| || ||||||| ||| || | ||||||||||
Sbjct 1112 ACGAAGCTCACAGCATTGGAGCAATTGGC-AAGACAGGAAGAGGTGT-T-TGTGAACTCC 1168
Query 1108 TGGGAGTTGACACAGCTGATGTGGACGTAATGATGGGAACCTTCACAAAATCTTTTGGGT 1167
| ||||||||||| ||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct 1169 TTGGAGTTGACACTTCTGATGTGGACATAATGATGGGAACTTTCACGAAATCTTTTGGGT 1228
Query 1168 CTTGTGGTGGCTATATTGCTGGATCTAAGGAGCTCATCCAATATTTGAAGCATCAATGCC 1227
||||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||
Sbjct 1229 CTTGTGGTGGCTATATTGCGGGATCAAAGGACCTCATCCAATATTTGAAGCACCAATGCC 1288
Query 1228 CGGCTCACCTTTACGCAACATCCATACCAACTCCTTCCGC-ACAACAAATCATTTCTGCC 1286
|||||||||||||||| ||||| || ||||||||||||| ||| |||||||| || ||
Sbjct 1289 CGGCTCACCTTTACGCCACATCAATTTCAACTCCTTCCGCGACA-CAAATCATATCGGCG 1347
Query 1287 ATTAAAG-TTATTCTGGGAGAGGATGGTTCAAACCGAGGAGCACAAAAGCTGGCAAGAAT 1345
|| |||| |||| || |||||||||||||||||| |||| ||||||||| | ||||||||
Sbjct 1348 AT-AAAGGTTATCCTTGGAGAGGATGGTTCAAACAGAGGGGCACAAAAGTTAGCAAGAAT 1406
Query 1346 ACGTGAGAACAGCAACTTTTTCCGGGCAGAGCTGCAGAAGATGGGATTTGAGGTACTTGG 1405
| | |||||||||||||||||| |||| ||| ||||||||||||| ||||| || |||||
Sbjct 1407 AAGGGAGAACAGCAACTTTTTCAGGGCTGAGTTGCAGAAGATGGGGTTTGAAGTTCTTGG 1466
Query 1406 AGACAATGATTCCCCAGTCATGCCAATAATGCTATACAACCCAGCAAAAATCCCAGCTTT 1465
|||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct 1467 AGACAATGATTCACCAGTCATGCCAATAATGCTTTACAATCCAGCAAAAATTCCAGCATT 1526
Query 1466 CTCAAGAGAATGTCTGCGACAAAAAGTGGCAGTGGTGGTCGTGGGTTTCCCAGCTACACC 1525
|||||| |||||| ||||| |||| |||| ||||||||||| |||||||||||||||||
Sbjct 1527 CTCAAGGGAATGTTTGCGAGAAAACTTGGCGGTGGTGGTCGTCGGTTTCCCAGCTACACC 1586
Query 1526 TCTACTGCTGGCTAGGGCACGTATTTGCATTTCCGCATCTCATTCAAGAGAAGATCTTAT 1585
||| |||| || ||||| ||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1587 CCTATTGCTAGCCAGGGCTCGTATTTGCATATCCGCATCTCACTCAAGAGAAGATCTTAT 1646
Query 1586 AAGAGCCCT-CAAGGTTATAAGCAAAGTAGGTGACCTTAGCGGAATCAAATATTTCCCGG 1644
|| |||||| || |||||||||||||| ||||||||||| ||| ||||||||||| ||||
Sbjct 1647 AAAAGCCCTACA-GGTTATAAGCAAAGCAGGTGACCTTACCGGGATCAAATATTTTCCGG 1705
Query 1645 CAGAGCCGAGGAAG-ATAGAAC-AGTCAAAAAATGACATCAAGTTGGATT 1692
||| || | ||| | |||| || ||||| || |||||| |||||||
Sbjct 1706 CAGCTCCAAAAAAGCA-AGAAGTAGAGAAAAA-TGGCATCAAATTGGATT 1753
> AT3G48790.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent
transferases superfamily protein | chr3:18093404-18095181 FORWARD
LENGTH=1053
Length=1053
Score = 889 bits (481), Expect = 0.0
Identities = 842/1011 (83%), Gaps = 45/1011 (4%)
Strand=Plus/Plus
Query 649 CAGGAACTACATCAGTGCATGCAGAACTTGAGGAATGTGTTACTAGGTTTGTTGGAAAGC 708
||||||||||| | ||||||| ||||||||||||||||||| ||| ||||| ||||| |
Sbjct 17 CAGGAACTACAGCTGTGCATGGAGAACTTGAGGAATGTGTTGCTAAATTTGTGGGAAAAC 76
Query 709 CTGCTGCTGTTGTTTTTGGCATGGGCTA-TGCAACAAACTCAGCTATCATTCCAGTCCTG 767
|||||||||||||||||||||||||||| | ||||||||| ||||||||| | ||| ||
Sbjct 77 CTGCTGCTGTTGTTTTTGGCATGGGCTACT-TAACAAACTCGGCTATCATTTCTGTCTTG 135
Query 768 ATTGGAAAGGGAGGGTTGATAATAAGTGATTCCTTGAACCATAGTTCGATTGTCAATGGT 827
||||| |||||||||||||||||||||||||| |||||||||| ||| ||| ||||||||
Sbjct 136 ATTGGCAAGGGAGGGTTGATAATAAGTGATTCTTTGAACCATACTTCAATTATCAATGGT 195
Query 828 GCTCGAGGTTCAGGAGCCACTATCCGTGTTTTCCAGCATAACACACCTTCCCATTTGGAA 887
|||||||||||||||||||||||||| |||||||| || |||| | ||| | ||
Sbjct 196 GCTCGAGGTTCAGGAGCCACTATCCGCGTTTTCCAACACAACA----T----ATT-GAAA 246
Query 888 CGAGTTTTGAGAGAACAAATTGCAGAAGGTCAACCTAGGACACATC-GACCATGGAAGAA 946
|| | | | || ||| || || ||||| |||||||| | |||| ||||||||
Sbjct 247 -GA------ACATATCA--TTG-AG--GGACAACCAAGGACACA-CAGACCGTGGAAGAA 293
Query 947 AATTATTGTTGTTGTTGAAGGTATTTACAGCATGGAAGGGGAGATTTGTCATCTGCCCGA 1006
|||||| |||||||||||||||||||| |||||||||||||| || ||| |||| || ||
Sbjct 294 AATTATCGTTGTTGTTGAAGGTATTTATAGCATGGAAGGGGAAATCTGTGATCTACCGGA 353
Query 1007 -AGTTGTCGCCA-TATGCAA-GAAGTATAAGGCATATGTTTACTTGGATGAGGCTCACAG 1063
| |||| | | |||||| || |||||||||||||||||| ||||| || ||||| ||
Sbjct 354 GA-TTGTTTC-AGTATGCAGTGA-GTATAAGGCATATGTTTATTTGGACGAAGCTCATAG 410
Query 1064 CATTGGGGCAATTGGTGAAACAGGAA-AGG-GTATCTGTGAACTCCTGGGAGTTGACAC- 1120
|||||| |||||||| |||||||| ||| || | ||||||||||| |||||||||||
Sbjct 411 CATTGGAGCAATTGGCAAAACAGGACGAGGTGT-T-TGTGAACTCCTAGGAGTTGACACT 468
Query 1121 AGCTGATGTGGACGTAATGATGGGAACCTTCACAAAATCTTTTGGGTCTTGTGGTGGCTA 1180
| |||| |||||| | |||||||| || ||||| |||||| | |||||||||||||||||
Sbjct 469 A-CTGAAGTGGACATTATGATGGGCACTTTCACGAAATCTCTCGGGTCTTGTGGTGGCTA 527
Query 1181 TATTGCTGGATCTAAGGAGCTCATCCAATATTTGAAGCATCAATGCCCGGCTCACCTTTA 1240
||||| ||||| ||||| || |||||||||||||||| || | ||| |||||||||||
Sbjct 528 CATTGCCGGATCCAAGGACCTTGTCCAATATTTGAAGCAACATTACCCTGCTCACCTTTA 587
Query 1241 CGCAACATCCATACCAACTCCTTCCGCACAACAAATCATTTCTGCCATTAAAGTTAT-TC 1299
||||||||| || |||||||| | ||||||||| |||| || ||||| ||||| || |
Sbjct 588 CGCAACATCAATTTCAACTCCTGCTGCACAACAAGTCATATCGGCCATAAAAGTCATCTT 647
Query 1300 TGGGAGAGGATGGTTCAAACCGAGGAGCACAAAAGCTGGCAAGAATACGTGAGAACAGCA 1359
||| || ||| ||||||||| |||| | || |||| | ||||||||| | ||||||||||
Sbjct 648 TGG-AGTGGACGGTTCAAACAGAGGGGAACTAAAGTTAGCAAGAATAAGGGAGAACAGCA 706
Query 1360 ACTTTTTCCGGGCAGAGCTGCAGAAGATGGGATTTGAGGTACTTGGAGACAATGATTCCC 1419
|||||||| |||| ||| ||||||||||||| || |||| ||||||| |||||||||
Sbjct 707 ACTTTTTCAGGGCTGAGTTGCAGAAGATGGGGTTCAAGGTCCTTGGAGTTTATGATTCCC 766
Query 1420 CAGTCATGCCAATAATGCTATACAACCCAGCAAAAATCCCAGCTTTCTCAAGAGAATGTC 1479
|| |||||||||||||||| ||||| |||||||||||| |||| |||||||| ||||||
Sbjct 767 CAATCATGCCAATAATGCTTTACAATCCAGCAAAAATCGCAGCCTTCTCAAGGGAATGTT 826
Query 1480 TGCGACAAAAAGTGGCAGTGGTGGTCGTGGGTTTCCCAGCTACACCTCTACTGCTGGCTA 1539
||||| |||| ||||| | ||||| || |||||||| ||| ||||||| |||| || |
Sbjct 827 TGCGAGAAAACTTGGCAATCGTGGTAGTCAGTTTCCCACCTATACCTCTATTGCTAGCCA 886
Query 1540 GGGCACGTATTTGCATTTCCGCATCTCA-TTCAAGAGAAGATCTTAT-AAGAGCCCT-CA 1596
|||| |||||||||| |||||||||||| || ||||||||||||||| || |||||| ||
Sbjct 887 GGGCTCGTATTTGCAATTCCGCATCTCACTT-AAGAGAAGATCTTATTAA-AGCCCTGCA 944
Query 1597 AGGTTATAAGCAAAGTAGGTGACCTTAGCGGAATCAAATATTTCCCGGCAG 1647
||||||||||| || ||||||||||| ||| ||||||||||| ||||||
Sbjct 945 -GGTTATAAGCAGAGCAGGTGACCTTACCGGGATCAAATATTTTACGGCAG 994
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94326824055
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5