BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489241
Length=1659
Score E
Sequences producing significant alignments: (Bits) Value
AT5G23800.1 | Symbols: ATDUF10, DUF 10 | DOMAIN OF UNKNOWN FUNC... 2272 0.0
AT5G23770.2 | Symbols: DUF8 | DOMAIN OF UNKNOWN FUNCTION 724 8 ... 761 0.0
AT5G23780.1 | Symbols: DUF9, ATDUF9 | DOMAIN OF UNKNOWN FUNCTIO... 597 1e-169
> AT5G23800.1 | Symbols: ATDUF10, DUF 10 | DOMAIN OF UNKNOWN FUNCTION
724 10 | chr5:8022216-8024689 REVERSE LENGTH=1659
Length=1659
Score = 2272 bits (1230), Expect = 0.0
Identities = 1527/1665 (92%), Gaps = 42/1665 (3%)
Strand=Plus/Plus
Query 1 ATGGAGAGGCAGATTCCGAGTGAAAGTTTATCTCTGAGTGAAGGTTGTGAAATCGAAATC 60
|||| ||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 1 ATGGGGAGGCAGGTTCCGAGTGAAAGTTTATCTCTGAGCGAAGGTTGTGAAGTCGAAATC 60
Query 61 TCTTACAAAAACAATAGCAATGAAAGCGTTTGGTACAAAGCCATTATCGAAGCAAAACCG 120
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 61 TCTTACAAAAACAATGGCAATGAAAGCGTTTGGTACAAAGCCATTCTCGAAGCAAAA-C- 118
Query 121 CCAAAGAATTCTACATTC--A-AAGAACTCTGTGTTCGGTTGCTTAAGGAAGACGTT-TC 176
|| ||||||| |||| | ||||||||| |||||| ||||||||||| ||| || ||
Sbjct 119 CC----AATTCTATATTCAAAGAAGAACTCTCTGTTCGTTTGCTTAAGGATGAC-TTCTC 173
Query 177 GACTCCTCTTAACGAACTCAGAGACAAAGTCTTGATTCGACCCATTCCGCCAAAAAACAT 236
|||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||| |
Sbjct 174 GACTCCTCTTAACGAACTCAGACACAAAGTCTTGATTAGACCCATTCCGCCAACAAATGT 233
Query 237 GCAAGATTGCATCGATATTGAGATAGGCACCTTCGTCGACGCTGATTATAAAGGTGCGTG 296
|||| |||||||||||| |||||||||||||||||||||||||| || |||| ||||||
Sbjct 234 ACAAGCTTGCATCGATATCGAGATAGGCACCTTCGTCGACGCTGACTACAAAGATGCGTG 293
Query 297 GTGGACTGGTCTTGTAGTCAAAGTGATTGATGATGACAAGTTTTGGGTGTGTTTTGATTC 356
|||| ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 294 GTGGGCTGGTTTTGTTGTCAAAGTGATTGATGATGACAAGTTTTGGGTTTGTTTTGATTC 353
Query 357 ACCACCTGATATCATTCAGTTTGAGAGAAAGCATTTGAGGCCTCA-TCTTCAGTGGGTCG 415
|||||||||||||||||||||||| ||||| |||||||||||| | |||| | |||||||
Sbjct 354 ACCACCTGATATCATTCAGTTTGATAGAAACCATTTGAGGCCT-ACTCTTGAATGGGTCG 412
Query 416 ATGAGAAGATATT-TTCATGGTGGATCATACGATCAACACGAAATTCAGAGTTCTTGAAG 474
|||||||||| || ||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 413 ATGAGAAGAT-TTATTCTTGGTGGATCATTGGATCAACACGAAATTCAGAGTTCTTGAAG 471
Query 475 CGGTTGTCTGAGGAGCCTATGTTTAGTCCTGGAACAATGGTGGAATTGTGTTCTAAGAGA 534
|||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 472 CGGTTGGCTGAGGAGCCTATGTTTAGTCCTGGAACAATTGTGGAATTGTGCTCTAAGAGA 531
Query 535 GACGAAGGTGAAGTGGTTTGGGTTCCTGCAATGGTTTTTAAAGAGTTTAAAGAGAATGAT 594
|| ||||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 532 GATGAAGGGGAAGTCGTTTGGGTTCCTGCATTGGTTTATAAAGAGTTTAAAGAGAATGAT 591
Query 595 GAGTATAGATATATTGTCAAGGATAGGCCTTTGATTGGCAGGAGTTATAGGACAAGACCC 654
||||||||||||||||||||||||| ||||||||| || |||||||||| | ||||||||
Sbjct 592 GAGTATAGATATATTGTCAAGGATAAGCCTTTGATCGGAAGGAGTTATAAGTCAAGACCC 651
Query 655 AACAAAACGGTTGATTTGCGTAGTCTTAGGCCTATACCGCCTCCTATTCGGGTTAAAGAG 714
| |||||| || || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 652 AGCAAAACTGTGGACTTGCGTAGTCTTAGGCCTATACCGCCTCCTATTCGGGTTAAAGAG 711
Query 715 TATCAATTGGAGGATTACATAGAGGTGTATCATGATGGTATAGGATGGCGTCAAGGACGA 774
|||| |||||| || ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 712 TATCGATTGGATGAGTACATTGAGGTGTATCATGATGGTATAGGATGGCGTCAAGGACGA 771
Query 775 GTTGTGGAAACTCG-AGGAGGAGTGATGGAATCTCTCTCTCAGAGA-TGGTGTACATTGC 832
|||||| ||| | | |||||||||||||| |||||||| ||||| | |||||||||||||
Sbjct 772 GTTGTGAAAAGT-GAAGGAGGAGTGATGGGATCTCTCTTTCAGA-ATTGGTGTACATTGC 829
Query 833 TTATAGAGGCTACAAAGAAGCAATTAACATTCAAAAAATCGGATCTTAGGCCTTTGAGGG 892
|| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct 830 TTTTAGAGGCTACAAAGAAGCAATTAATGTTCAAACAATCGGATCTTAGGCCTTTGAGGG 889
Query 893 TGTGGGAAGATGGCCTTTGGAAGACAAGGAAATCATCGTTAACTCAGGGATCAGGAGATA 952
|||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 890 TGTGGGAAGATGGCGTTTGGAAGACAAGGGAATCATCGTTAACTCAGGGGTCAGGAGATA 949
Query 953 AGACAGAGGCTGAAACTCAGAGAAAGACATTCCCCAAGAAGACACTTTCAAGGAATCAGA 1012
||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 950 AGACAGAGGTTGAAACTCAAAGAAAGACATTCCCCAAGAAGACACTTCCAAGGAATCAGA 1009
Query 1013 ATGGTTCAGGAAACGATTCAACACGAGAGAATGAAAATAGCAATCGAAAGAGGAAAAGAG 1072
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1010 ATGGTTCAGGAAACGATTCAACACTAGAGAATGAAAATAGCAATCGAAAGAGGAAAAGAG 1069
Query 1073 AAGAAAACCTTTGTTCTGTTTCTAGTGTTGAGGAAAACAAAGTCAAGGATACTACAACAG 1132
|||||||||||||||||| ||||||||||||||||| | ||| | |
Sbjct 1070 AAGAAAACCTTTGTTCTGGTTCTAGTGTTGAGGAAA-C-----CAA-----C-A------ 1111
Query 1133 TTTTGCTCTTTGAGAAGAAGTTACCAATTTGGAAGATACTTGATTCAATGGAGGTATTTA 1192
|| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 1112 TT---CTCTTTGAGAAGAAGTTACCAGTTTGGAAGATACTTGAATCAATGGAGGTATTTA 1168
Query 1193 A-AGCAGTCCCACAAAGTCCTCATTTCAGCCCATTGGCGGAGATTAGAGAAGATTCCCGT 1251
| | || |||||||||||||||||||| |||| ||||| |||||||||||||||||||||
Sbjct 1169 AGA-CAATCCCACAAAGTCCTCATTTCCGCCCCTTGGCAGAGATTAGAGAAGATTCCCGT 1227
Query 1252 GAAATGTTGGCGGTTGGTATGATGCTTACCTTTTCATGTTTACTTGAACAAGTCAAAGCT 1311
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1228 GAAATGTTGGCGGTTGGTATGATGCTTACCTTTTCATGTTTACTTGAGCAAGTCAAAGCT 1287
Query 1312 CTGCAACACGACGAGAACATAAGCTCATTTATAAGCCTTAGTAATTCCTTTACCGAGTTA 1371
||||||||||||||| || |||||||||||||||||| |||||||||||| ||||||||
Sbjct 1288 CTGCAACACGACGAGGCCAGAAGCTCATTTATAAGCCTCAGTAATTCCTTTGCCGAGTTA 1347
Query 1372 GAGACACACGGGTTCAATGTACAAGTAGCTCAGTTGCGGATCAATAAGTTGTTGACTCTT 1431
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1348 GAGAAACACGGGTTCAATGCACAAGTAGCTCAGTTGCGGATCAATAAGTTGTTGACTCTT 1407
Query 1432 AGAGGTATGCAATCAAAGAAACTGGATGAACTCAATGGTGCCAAGAAAGTGACTGCAGAT 1491
|||||||||||||||| |||| ||||||||||||| || ||||||||||||||||||||
Sbjct 1408 AGAGGTATGCAATCAAGGAAAATGGATGAACTCAAAGGCGCCAAGAAAGTGACTGCAGAG 1467
Query 1492 AAAGAGAGCGTAAAGGCTGAGAACGAACGCAAGATTCTCGAGCTGCAGAGGCTGAATGAG 1551
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1468 AAAGAGAGCGTAAAGGTTGAGAACGAGCGCAAGATTCTCGAGCTGCAGAGGCTGAATGAG 1527
Query 1552 GAGATGGACAAAGAGATAGCTCAGAGTATGTCATGTGAAGCAAAGATTGTCCAACAGCTT 1611
||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct 1528 GAGATGGCCAAAGAGATAGCTCAGAGTATGTCATGTGAAGGAAAGATTCTCCAACAGCTT 1587
Query 1612 GATGATATGAAGCTTGAGTTTCATGCAACTGCATCGGCTCCATGG 1656
||| ||||||||||||||||||| ||||||||||| |||||||||
Sbjct 1588 GATAATATGAAGCTTGAGTTTCAGGCAACTGCATCAGCTCCATGG 1632
> AT5G23770.2 | Symbols: DUF8 | DOMAIN OF UNKNOWN FUNCTION 724
8 | chr5:8014381-8016913 REVERSE LENGTH=2027
Length=2027
Score = 761 bits (412), Expect = 0.0
Identities = 622/721 (86%), Gaps = 24/721 (3%)
Strand=Plus/Plus
Query 957 AGAGGCTGAAACTCAGAGAAAGACATTCCCCAAGAAGACACTTTCAAGGAATCAGAATGG 1016
|||||||| |||||| |||||| || || |||||||||||||| ||||||||||||||||
Sbjct 1181 AGAGGCTGGAACTCAAAGAAAGGCACTCTCCAAGAAGACACTTCCAAGGAATCAGAATGG 1240
Query 1017 TTCAGGAAACGATTCAACACGAGAGAATGAAAAT-----AG----CAATCGAAAGAGGAA 1067
|| |||||||||||||| | ||||||||||||| || |||||||||||||||
Sbjct 1241 CTCGGGAAACGATTCAACGCTAGAGAATGAAAATAGCGAAGATAACAATCGAAAGAGGAA 1300
Query 1068 AAGAGAAGAAAACCTTTGTTCTGTTTCTAGTGTTGAGGAAAACAAAGTCAA-GGATACTA 1126
|||||||||||||||| ||| |||| ||||||||||| || ||||| ||| |||||| |
Sbjct 1301 AAGAGAAGAAAACCTTGGTTGTGTTGCTAGTGTTGAGCAAGACAAAC-CAAAGGATACAA 1359
Query 1127 CAACAGTTTTGCTCTTTGAGAAGAAGTTACCAATTTGGAAGATACTTGATTCAATGGAGG 1186
||| ||||| | ||||||||||||||||| ||||||| ||| ||| || ||||||||||
Sbjct 1360 CAATGGTTTTACCCTTTGAGAAGAAGTTACGAATTTGGGAGACACTAGAATCAATGGAGG 1419
Query 1187 TATTTAAAGCAGTCCCACAAAGTCCTCATTTCAGCCCATT---GGCGGAGATTAGAGAAG 1243
| |||||| |||||||||| |||||||||||||||||||| || ||||| ||||||||
Sbjct 1420 TGTTTAAAACAGTCCCACAGAGTCCTCATTTCAGCCCATTATTGGTGGAGAGTAGAGAAG 1479
Query 1244 ATTCCCGTGAAATGT-TGGCGGTTGGTATGATGCTTACCTTTTCATG-TTTACTTGAACA 1301
| ||||||||||||| || |||||||||||||||||||||||| || ||||||||| |
Sbjct 1480 ACTCCCGTGAAATGTCTG-CGGTTGGTATGATGCTTACCTTTTT-TGGTTTACTTGATGA 1537
Query 1302 AGTCAAAGCTCTGCAACACGACGAGAACATAAGCTCATTTATAAGCCTTAGTAATTCCTT 1361
||||||||||||||||||| |||| |||||||| ||||||||||| | |||||| ||
Sbjct 1538 AGTCAAAGCTCTGCAACACAACGATCCCATAAGCTTTTTTATAAGCCTCACTAATTCTTT 1597
Query 1362 TACCGAGTTAGAGACACACGGGTTCAATGTACAAGTAGCTCAGTTGCGGATCAATAAGTT 1421
| |||||||||||| |||||||||||||||| ||| | |||||| |||||||||||| |
Sbjct 1598 TGCCGAGTTAGAGAAACACGGGTTCAATGTAAAAGCACCTCAGTCACGGATCAATAAGCT 1657
Query 1422 GTTGACTCTTAGAGGTATG-CAATCAAAGAAA-CTGGATGAACTCAATGGTGCCAAGAAA 1479
|||| |||| |||| || | |||||||||||| | | | |||||||| | |||| |||||
Sbjct 1658 GTTGTCTCTCAGAGATA-GACAATCAAAGAAAACAG-AGGAACTCAAAGATGCCGAGAAA 1715
Query 1480 GTGACTGCAGATAAAGAGAGCGTAAAGGCTGAGAACGAACGCAAGATTCTCGAGCTGCAG 1539
||||| ||||| |||||||||||||| ||||||||| ||||||||||||| ||||||||
Sbjct 1716 GTGACCGCAGAGAAAGAGAGCGTAAAAGCTGAGAACAAACGCAAGATTCTTGAGCTGCAA 1775
Query 1540 AGGCTGAATGAGGAGATGGACAAAGAGATAGCTCAGAGTATGTCATGTGAAGCAAAGATT 1599
||||| ||||| ||||||||||||||||||||||| |||| |||||||| ||||||||||
Sbjct 1776 AGGCTAAATGAAGAGATGGACAAAGAGATAGCTCAAAGTAAGTCATGTGCAGCAAAGATT 1835
Query 1600 GTCCAACAGCTTGATGATATGAAGCTTGAGTTTCATG-CAACTGCATCGGCTCCATGGTA 1658
||||||||||| |||||| ||||||||||||||| || |||| ||||| |||||||||||
Sbjct 1836 GTCCAACAGCTCGATGATGTGAAGCTTGAGTTTC-TGGCAACAGCATCAGCTCCATGGTA 1894
Query 1659 A 1659
|
Sbjct 1895 A 1895
Score = 547 bits (296), Expect = 1e-154
Identities = 595/730 (82%), Gaps = 57/730 (8%)
Strand=Plus/Plus
Query 257 AGATAGGCACCTTCGTCGACGCTGATTATAAAGGTGCGT-GGTGGACTGGTCTTGTAGTC 315
|||||||| || ||||||| ||||||||||||| ||||| ||| |||||| |||| |||
Sbjct 394 AGATAGGCTCCATCGTCGAAGCTGATTATAAAGATGCGTGGGT-CACTGGTTTTGTGGTC 452
Query 316 AAAGTGATTGATGATGACAAGT-TTTGGGTGTGTTTTGATTCACCACCTGATATCATTCA 374
|||| |||||||| || ||||| ||| |||||| ||||||||| ||||||| | ||||
Sbjct 453 AAAGAGATTGATGTTGGCAAGTGTTT-GGTGTGCTTTGATTCAATACCTGATGTTATTCT 511
Query 375 GTTTGAGAGAAAGCATTTGAGGCCTCATCTTCAGTGGGTCGATG--AGAAGATATTTTCA 432
|||||||||||||| |||||||||||||||||||||| |||||| || |||| | ||
Sbjct 512 GTTTGAGAGAAAGCTTTTGAGGCCTCATCTTCAGTGGCTCGATGATAGTGGATA--TACA 569
Query 433 TGGT-GGATCATACG-ATC-AACACGAAAT-TC-AGAGTTCTTGAAG-CGGTTGTCTGAG 486
| | |||| || | ||| || || | | || | |||||||| || |||||| ||||
Sbjct 570 TTTTGGGAT-AT-GGTATCGAA-AC--ATTATCGAAAGTTCTTG-AGACGGTTGGCTGAA 623
Query 487 GAGCCTATGTTTAGTCCTGGAACAATGGTGGAATTGTGTTCTAAGAGAGACGAAGGTGAA 546
||||||||||||||||||||||||||||||||| || ||||||||| | | |||||||||
Sbjct 624 GAGCCTATGTTTAGTCCTGGAACAATGGTGGAAGTGAGTTCTAAGATAAATGAAGGTGAA 683
Query 547 GTGGTTTGGGTTCCTGCAATGGTTTTTAAAGAGTTTAAAGAGAATGATGAGTATAGATAT 606
|| |||||||||||| |||||||| ||||||||||||||||| |||||||||||| ||||
Sbjct 684 GTCGTTTGGGTTCCTTCAATGGTTATTAAAGAGTTTAAAGAGGATGATGAGTATAAATAT 743
Query 607 ATTGTCAAGGATAGG-CCTTT-GATTG-GCAGGAGTTATA-GGACAAGACCCAACAAAAC 662
||||||||||||| | ||||| | | | | ||| | | | || ||||||||||||||||
Sbjct 744 ATTGTCAAGGATAAGTCCTTTAGCT-GCG-AGG-GAAAAAAGG-CAAGACCCAACAAAAC 799
Query 663 GGTTGATTTG-CGTAGTCTTAGGCCTATACC-GCCTCCTATTCGGGTTAAAGAGTATCAA 720
||||||||| | |||||||||||||||||| | | || | | || | ||||||||
Sbjct 800 CGTTGATTTGTC-TAGTCTTAGGCCTATACCAG--T---AT-CAG-TTGACGAGTATCAG 851
Query 721 TTGGAGGATTACATAGAGGTGTATCATGATGGTATAGGATGGCGTCAAGGACGAGTTG-T 779
|||||||| || ||||||||| || ||||||||| || |||||||| |||||||| | |
Sbjct 852 TTGGAGGAAAACGTAGAGGTGTTTCTTGATGGTATGGGGTGGCGTCATGGACGAGT-GAT 910
Query 780 GGAAACTCGAGGAG-GAGTGAT-GGAATCTCTCTCTCAGAGATGGTGTACAT-TGC-TTA 835
|| || || || || ||| ||| |||| | |||||||||| ||||| | | ||| ||
Sbjct 911 GGGAAGTCAAG-AGCGAGCGATAGGAA-CACTCTCTCAGAAATGGTATTT-TGTGCGTT- 966
Query 836 TAGAGGCTACAAAGAAGCAATTAACATTCAAAAAATCGGATCTTAGGCCTTTGAGGGTGT 895
| || ||||||||||||||||||| ||||| | ||||||||||||||||||| |||||
Sbjct 967 TGGAATCTACAAAGAAGCAATTAACGTTCAAGCAGTCGGATCTTAGGCCTTTGAAGGTGT 1026
Query 896 GGGAAGATGGCCTTTGGAAG-------A--CAAGGAAATCATCGTTAACTCAGGGATCAG 946
||||||||||| |||||||| | ||||| ||| ||||| |||||||||||||
Sbjct 1027 GGGAAGATGGCGTTTGGAAGGTGTTGCAGACAAGGGAATTGTCGTTTACTCAGGGATCAG 1086
Query 947 GAGATAAGAC 956
||||||||||
Sbjct 1087 GAGATAAGAC 1096
> AT5G23780.1 | Symbols: DUF9, ATDUF9 | DOMAIN OF UNKNOWN FUNCTION
724 9 | chr5:8017192-8019026 REVERSE LENGTH=1380
Length=1380
Score = 597 bits (323), Expect = 1e-169
Identities = 573/687 (83%), Gaps = 44/687 (6%)
Strand=Plus/Plus
Query 988 AAG-AAGACACTTTCAAGGAATCAGAATGGTTCAG-GAAACGATTCAACACGAGAGAATG 1045
||| ||||||||| | ||||||||||||| ||||| | ||||||||||||||||||||||
Sbjct 624 AAGAAAGACACTTCCGAGGAATCAGAATGCTTCAGTG-AACGATTCAACACGAGAGAATG 682
Query 1046 -AAA-A-T--AG----CAATCGAAAGAGGAAAAGAGAAGAAAACCTTTGTTCTGTTTCTA 1096
||| | | || |||||||| |||||||||||||||| ||||||||||| | |||
Sbjct 683 AAAATAGTGAAGATATTAATCGAAAAAGGAAAAGAGAAGAAAGCCTTTGTTCTGATGCTA 742
Query 1097 GTGTTGAGGAAAACAAAGTCAAGGATACTACAACAGTTTTGCTC-TTTGAGAAGAAGTTA 1155
||||||||| || | ||| | | | || ||||| | ||||| ||||||||
Sbjct 743 GTGTTGAGG---AC--A--CAA-CA-A-T--GAC---TTTGC-CATTTGAAAAGAAGTTG 786
Query 1156 CCAATTTGGAAGATACTTGATTCAATGGAGGTATTTAAAGCAGTCCCACAAAGTCCTCAT 1215
|||||||||||| |||||| ||| |||| | | ||||||||||||||||||||
Sbjct 787 TCAATTTGGAAGACACTTGAATCAGTGGA-G-------A-CAGTCCCACAAAGTCCTCAT 837
Query 1216 TTCAGCCCATTGGCGGAGATTAGAGAAGATTCCCGTGAAATGT-TGGCGGTTGGTATGAT 1274
|||||||| |||| |||| ||||||||||| ||||||||||| || ||||||| |||||
Sbjct 838 TTCAGCCCGTTGGTTGAGACTAGAGAAGATTGCCGTGAAATGTCTG-CGGTTGGGATGAT 896
Query 1275 GCTTACCTTTTCATGTTTACTTGAACAAGTCAAAGCTCTGCAACACGACGAGAACATAAG 1334
||| |||||| | ||||||||||| |||||||| |||||||||||||| | ||||||
Sbjct 897 GCTCACCTTTCCTTGTTTACTTGAGGAAGTCAAATCTCTGCAACACGACAATTCCATAAG 956
Query 1335 CTCATTTATAAGCCTTAGTAATTCCTTTACCGAGTTAGAGACACACGGGTTCAATGTACA 1394
|||||| |||||||| |||||| |||| |||| |||||| |||||||||||||||| |
Sbjct 957 CTCATTGATAAGCCTCAGTAATAACTTTTGCGAGCTAGAGAAACACGGGTTCAATGTA-A 1015
Query 1395 AGT-AGCTCAGTTGCGGATCAATAAGTTGTTGACTCTTAGAGGTATGCAATCAAAGAAAC 1453
|| | |||||| ||||||| |||| ||||| |||||||||||| |||||||| ||||
Sbjct 1016 AGGCACCTCAGTCACGGATCAGTAAGCTGTTGTCTCTTAGAGGTAAGCAATCAATGAAAA 1075
Query 1454 TGGATGAACTCAATGGTGCCAAGAAAGTGACTGCAGATAAAGAGAGCGTAAAGGCTGAGA 1513
||||||||||||| ||||| |||||||||||||||| ||||||||| ||||| |||||
Sbjct 1076 TGGATGAACTCAAAGGTGCTGAGAAAGTGACTGCAGAAAAAGAGAGCATAAAGATTGAGA 1135
Query 1514 ACGAACGCAAGATTCTCGAGCTGCAGAGGCTGAATGAGGAGATGGACAAAGAGATAGCTC 1573
|||||||||||||||| |||||||||||||||||||||||| | || |||||||||||||
Sbjct 1136 ACGAACGCAAGATTCTAGAGCTGCAGAGGCTGAATGAGGAGGTAGATAAAGAGATAGCTC 1195
Query 1574 AGAGTATGTCATGTGAAGCAAAGATTGTCCAACAGCTTGATGATATG-AAGCTTGAGTTT 1632
|||||| |||||||| ||| |||||||||||||| ||||| ||| || || ||| |||||
Sbjct 1196 AGAGTAAGTCATGTGCAGCGAAGATTGTCCAACAACTTGAAGATGTGGAA-CTTCAGTTT 1254
Query 1633 CATGCAACTGCATCGGCTCCATGGTAA 1659
|| |||||||||||||||||||||||
Sbjct 1255 CAAACAACTGCATCGGCTCCATGGTAA 1281
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81977489985
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5