BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489290
Length=1418
Score E
Sequences producing significant alignments: (Bits) Value
AT5G24310.1 | Symbols: ABIL3 | ABL interactor-like protein 3 | ... 1690 0.0
AT3G49290.1 | Symbols: ABIL2 | ABL interactor-like protein 2 | ... 802 0.0
> AT5G24310.1 | Symbols: ABIL3 | ABL interactor-like protein 3
| chr5:8273546-8276526 FORWARD LENGTH=1515
Length=1515
Score = 1690 bits (915), Expect = 0.0
Identities = 1106/1197 (92%), Gaps = 17/1197 (1%)
Strand=Plus/Plus
Query 155 tttttttGTGTTTAAATCTCTCCATTTTTATCAATCTGTTTTTCGAGCAATTTAGCAGCG 214
|||||| ||||||||||| | |||||||| |||||||||||||||||||| | || |
Sbjct 191 TTTTTTGGTGTTTAAATCAC-CCATTTTTGTCAATCTGTTTTTCGAGCAA---AACACCA 246
Query 215 GGAGGAAACC-AAAAGCTAGAGTCTTGGAGGGAG-AAGAAGAAGATTCCGCAGTG-AAAG 271
|||||||||| ||||||||||| ||| | |||| ||||||||| | | ||||| |||
Sbjct 247 GGAGGAAACCAAAAAGCTAGAGGCTTTG-TGGAGTGAGAAGAAGAGT-CTCAGTGAAAAC 304
Query 272 AGAGAA-CAGGGTTT--GA-TCCATTGTTAATCTTTGAA-TCAAAATGAGTGCAGCGGCT 326
||| || ||| ||| || |||| |||||||||||||| | |||||||||||||| |||
Sbjct 305 AGA-AAGCAGCATTTGAGATTCCACTGTTAATCTTTGAATTAAAAATGAGTGCAGCAGCT 363
Query 327 ACCATGCCCATGCCCCGAAAAGCATCTAATTACGATGAGATCTCTATGCAACAGAGCATG 386
|| ||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct 364 ACAATGCCTATGCCCCGAGAAGCGTCTAATTACGATGAGATCTCTATGCAACAGAGCATG 423
Query 387 CTCTTTTCTGATAGCCTTAAGGATCTGAAAAATCTGAGAACACAATTGTATTCAGCAGCT 446
||||| |||||||| || ||||||||||| |||||||||||||| |||||||||||||||
Sbjct 424 CTCTTCTCTGATAGTCTCAAGGATCTGAAGAATCTGAGAACACAGTTGTATTCAGCAGCT 483
Query 447 GAGTATTTCGAACTATCCTACACAAACGATGAACAAAAACAGATAGTCGTGGAGACACTG 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 GAGTATTTCGAACTATCCTACACAAACGATGAACAAAAACAGATAGTCGTGGAGACACTG 543
Query 507 AAAGATTACGCGATAAAGGCTTTGGTGAATACAGTTGACCATTTGGGATCTGTTACATAT 566
|||||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct 544 AAAGATTATGCAATAAAGGCTCTGGTGAATACAGTTGACCATTTGGGGTCTGTTACATAT 603
Query 567 AAAGTCAATGACTTTGTCGATGAAAAAGTTGATGAAGTAGCCGGAACCGAACTACGAGTG 626
||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||
Sbjct 604 AAAGTAAATGACTTTGTAGATGAAAAAGTCGATGAAGTAGCAGGAACCGAACTGCGAGTA 663
Query 627 TCTTGTATTGAACAGAGGTTACGGATGTGCCAAGAGTATATGGATCATGAAGGTCGTTCA 686
||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 664 TCTTGCATTGAACAGAGGCTACGGATGTGCCAAGAGTACATGGATCATGAAGGTCGTTCC 723
Query 687 CAGCAATCACTCGTGATCGACACTCCAAAGTTCCACAAGCGATACATCTTGCCTTCGGGC 746
||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||
Sbjct 724 CAGCAATCACTTGTGATCGACACTCCAAAGTTCCACAAGCGGTACTTCTTGCCTTCTGGT 783
Query 747 GAAATCAAGAGGGGTGGCAACCTCGCAAAGCTAAAGAATGTTGAAAGTAGTTTTGATGGA 806
|||||||| || |||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 784 GAAATCAAAAGAGGTGGCAACCTCGCAAAGCTTAAGAATGTTGAAGGTAGTTTTGATGGA 843
Query 807 GAAGAGGACTGGAACCAATTCAGAAATGCTGTTCGTGCTACAATTCGTGAAACGCCTCCA 866
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 844 GAAGATGACTGGAACCAATTCAGAAATGCTGTTCGCGCTACAATTCGTGAAACGCCTCCA 903
Query 867 CCACCCGTTAGAAAACCGGTACTTCAGTCTCCCTCTCAACGGAAACCTCAACGTTCAGCA 926
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 904 CCACCTGTTAGAAAACCGATACTTCAGTCTCCCTCTCAACGGAAACCTCAACGTTCAGCA 963
Query 927 ACCTTTTCGTTCTCCTCTATTGCCACGGCACCAAAGAAAGAACAAGATAAGCGAGCAGTA 986
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 964 ACCTTTTCGTTCTCCTCTATCGCCACCGCACCAAAGAAAGAACAAGATAAGCGAGCAGTA 1023
Query 987 TCACCACATCGGTTTCCGCTTCTAAGATCTGGTTCGGTTGCTATCCGACCATCATCAATC 1046
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1024 TCACCACATCGGTTTCCGCTGCTAAGATCTGGTTCGGTTGCTATCCGACCGTCATCAATC 1083
Query 1047 AGCAGGCCAACAACCCCGAGCAAGAGTAGAGCAGTAACTCCTACTCCTAAACGGTATCCA 1106
||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1084 AGCCGGCCAACAACCCCGAGCAAGAGTAGAGCGGTAACTCCAACTCCTAAACGGTATCCG 1143
Query 1107 TCAGAACCAAGAAGATCGGCTTCGGTTCGAGTTGCATTCGAGAAAGAAGCACAGAAAGAA 1166
||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||
Sbjct 1144 TCAGAACCAAGAAGATCGGCTTCGGTTCGGGTTGCGTTCGAGAAAGAAGCTCAGAAAGAA 1203
Query 1167 CCAGAACATCAACAACAACCGAGCAAGAGCAAACGGCTGCTTAAGGCGTTGCTTAGCCGA 1226
||||| ||||||||||||||||||||||||||||||||||| |||||| | |||||||||
Sbjct 1204 CCAGAGCATCAACAACAACCGAGCAAGAGCAAACGGCTGCTAAAGGCGCTACTTAGCCGA 1263
Query 1227 CGCAAAACCAAGAAAGACGATACGCTCTACACTTATTTGGACGAATATTAAACCGAAAGC 1286
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1264 CGCAAAACAAAGAAGGACGATACGCTCTACACTTATTTGGACGAATATTAAACCGAAAGC 1323
Query 1287 TGGTTTTGTATATCGACTGGTAAACCGGAAATTACATTCCAACTTTTA-TTGCATTT 1342
||||||||||| | ||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1324 TGGTTTTGTATGTTGACTGGTAAACCGGAAATTACATTCCAG-TTTTAATTGCATTT 1379
Score = 211 bits (114), Expect = 1e-53
Identities = 129/136 (95%), Gaps = 2/136 (1%)
Strand=Plus/Plus
Query 1 aaaaaaaGAGCGAGCGTTCGTTACTCCGGAAATGGTGGACAAAAGTGGGTAAGTGAGTGG 60
|||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||
Sbjct 4 AAAAAAAGAGCGAGCGTTCGTTGCTCCGGAAATGATGGGCAAAAGTGGGTAAGTGAGTGG 63
Query 61 G-AATTGAAGGTCTGTGAATACCAAACGCTTCCCTTTTTCTTCACTTTCTTCCCTCTATT 119
| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 64 GAAATAG-AGGTCTGTGAATACCAAACGCTTCCCTTTTTCTTCACTTTCTTCCCTCTAAT 122
Query 120 TACTCTCTTGTCTCTC 135
||||||||||||||||
Sbjct 123 TACTCTCTTGTCTCTC 138
> AT3G49290.1 | Symbols: ABIL2 | ABL interactor-like protein 2
| chr3:18272425-18275341 FORWARD LENGTH=1505
Length=1505
Score = 802 bits (434), Expect = 0.0
Identities = 784/947 (83%), Gaps = 47/947 (5%)
Strand=Plus/Plus
Query 346 AAGCATCTAATTACGATGAGATCTCTATGCAACAGAGCATGCTCTTTTCTGATAGCCTTA 405
|||| || |||||||||||| | |||||||| || || |||||||| |||||| | |||
Sbjct 463 AAGCTTCAAATTACGATGAGGTTTCTATGCAGCAAAGTATGCTCTTCTCTGATGGTCTTC 522
Query 406 AGGATC-TGAAAAATCTGAGAACACAATTGTATTCAGCAGCTGAGTATTTCGAACTATCC 464
|||| | |||| |||||| || | || |||||||||||||| |||||||||||||||||
Sbjct 523 AGGA-CTTGAAGAATCTGCGAGCGCAGTTGTATTCAGCAGCCGAGTATTTCGAACTATCT 581
Query 465 TACACAAACGATGAACAAAAA-CAGATAGTCGTGGAGACACTGAAAGATTACGC-GATAA 522
||||||| ||||| | ||||| ||||| || || |||||||||||||| ||||| | | |
Sbjct 582 TACACAACCGATG-ATAAAAAGCAGATTGTTGTAGAGACACTGAAAGACTACGCTG-TGA 639
Query 523 AGGCTTTGGTGAATACAGTTGACCATTTGGGATCTGTTACATATAAAGTCAATGACTTTG 582
||||| |||||||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct 640 AGGCTCTGGTGAATACAGTTGACCATTTAGGCTCTGTTACATATAAAGTGAATGACTTTA 699
Query 583 TCGATGAAAAAGTTGATGAAGTAGCCGGA-ACCGAACTACGAGTGTCTTGTATTGAACAG 641
||||||||||||| ||||||||| | || ||||| || ||||| ||||| || ||||||
Sbjct 700 TCGATGAAAAAGTCGATGAAGTA-TCAGAGACCGAGCTGCGAGTATCTTGCATCGAACAG 758
Query 642 AGGTTACGGATGTGCCAAGAGTATATGGATCATGAAGGTCGTTCACAGCAATCACTCGTG 701
||| || | ||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 759 AGGCTAAGAATGTGCCAAGAGTATATGGATCATGAAGGGCGTTCACAGCAATCACTTGTT 818
Query 702 ATCGACACTCCAAAGTTCCACAAGCGATACATCTTGCCTTCGGGCGAAATCAAGAGGGGT 761
|| ||||||||||||||||| || ||||||||||| || |||| ||||| | || | |
Sbjct 819 ATTGACACTCCAAAGTTCCATAAACGATACATCTTACCCGCGGGTGAAATTATGACTGCT 878
Query 762 GGCAAC-CTCGCAAAGCTAAAGAA-TGTTGAAAGTAGTTTTGATGGA-GAAGAGGACTGG 818
||| || | |||||| ||| | | ||| ||| ||||| || ||| | ||| || |||
Sbjct 879 A-CAAATCTTGAAAAGCTTAAGTACT-TTGGAAGCAGTTTAGA-GGATGCAGATGATTGG 935
Query 819 AACCAATTCAGAAATGCTGTTCGTGCTACAATTCGTGAAACGCCTCCACCACCCGTTAGA 878
||||||||| |||||||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct 936 AACCAATTCCGAAATGCTGTTCGTGCTACAATCCGGGAAACGCCTCCACCACCTGTTAGA 995
Query 879 AAACCGGTA-CTTCAGTCTCCCTCTCAACGG-AA--ACCTCAACGTTCAGCAACCTTTTC 934
||| | | || ||| | | |||| |||| || ||||||||| ||||||||||||||
Sbjct 996 AAATCAACATCT-CAGAGTTCATCTCCACGGCAACCACCTCAACGATCAGCAACCTTTTC 1054
Query 935 GTTCT-CCTCTATTGCCACGGCACCAAAGAAAGAACAAGATAAGCGAGCAGTATCACCAC 993
||| | |||||| ||| | | ||||||||||||||||||| || |||| ||||| |
Sbjct 1055 GTT-TACCTCTA---CCATT-C-C-AAAGAAAGAACAAGATAAGAGATCAGTTTCACCGC 1107
Query 994 ATCGGTTTCCGCTTCTAAGATCTGGTTCGGTTGCTATCC-G-AC--CATCATCAATCAGC 1049
|||||||||| || ||||||||||| || || |||| || | | || |||||||||||
Sbjct 1108 ATCGGTTTCCACTACTAAGATCTGGATCAGTCGCTA-CCAGGAAGTCAGCATCAATCAGC 1166
Query 1050 AGGCCAACAACCCCGAGCAAGAGTAGAGC-AGTAACTCCTACTCCTAAACGGTATCCATC 1108
| ||||| || || |||||||| ||| | | ||||||||| | | |||||||||||
Sbjct 1167 CGACCAACGACACCAAGCAAGAGCAGATCTA-TAACTCCTA-T---A--CGGTATCCATC 1219
Query 1109 AGAACCAAGAAGATCGGCTTCGGTTCGAGTTGCATTCGAGAAAGA-AGCACAGAAAGAAC 1167
|||||||||||||||||||||||| ||||| |||||||||||||| | | |||||||||
Sbjct 1220 AGAACCAAGAAGATCGGCTTCGGTCCGAGTCGCATTCGAGAAAGATAAC-CAGAAAGAAA 1278
Query 1168 CAGAACATCAACAACAACCGAGCAAGAGCAAACGGCTGCTTAAGGCGTTGCTTAGCCGAC 1227
|||| || ||||||| | ||||||||||||||| |||| ||||| |||||||| ||||
Sbjct 1279 CAGAGCAGCAACAAC--C-GAGCAAGAGCAAACGATTGCTCAAGGCTTTGCTTAGTCGAC 1335
Query 1228 GCAAAACCAAGAAAGACGATACGCTCTACACTTAT-TTGGACGAATA 1273
|||||||||||||||| || || |||||||||| | |||||||||||
Sbjct 1336 GCAAAACCAAGAAAGATGACACTCTCTACACTT-TCTTGGACGAATA 1381
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69879158640
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5