BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489387 Length=770 Score E Sequences producing significant alignments: (Bits) Value AT5G25360.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 941 0.0 > AT5G25360.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:8799710-8802648 REVERSE LENGTH=960 Length=960 Score = 941 bits (509), Expect = 0.0 Identities = 584/618 (94%), Gaps = 13/618 (2%) Strand=Plus/Plus Query 155 TTG-AGATGCATCTCTGTGAAATTATTCCCTCTTGGATCTACCAGTTATTTGGTTGCATG 213 ||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 221 TTGTAGATGCATCTCCGTGAAATCATTCCCTCTTGGATCTACCAGTTATTTGGTTGCATG 280 Query 214 GGAGGTTGTTTTGGATGCTGCAATAAACCACCGCTTATAGTTGCAGTGGATGAGCCGTCT 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 281 GGAGGTTGTTTTGGATGCTGCAATAAACCACCGCTTATAGTTGCAGTGGATGAGCCGTCT 340 Query 274 AAAGGGTTAAGGATTCAAGGTCGTTTAGTGAAGAAGCCAAGCGTATCAGACGACTTTTGG 333 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 341 AAAGGGTTAAGGATTCAAGGTCGTTTAGTGAAGAAGCCAAGCGTATCAGAGGACTTCTGG 400 Query 334 AGCACAAGCACTTGCGAGATGGATAACAGCACACTTCAGTCACAGAGAAGCATGTCTTCT 393 ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 401 AGCACAAGCACCTGCGAGATGGATAATAGTACACTTCAGTCACAGAGAAGCATGTCTTCT 460 Query 394 ATCAGCTTCACTAACAATACTTCTACTTCTGCAAGTACAAGTAACCCCACAGAATTTGTA 453 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 461 ATTAGCTTCACTAACAATACTTCTACTTCTGCAAGTACAAGCAACCCCACAGAATTTGTA 520 Query 454 AACCATGGATTGAACCTCTGGAACCAAACTAGGCAACAATGGCTTGCAAATGGAACTTCT 513 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 521 AACCACGGATTGAACCTCTGGAACCAAACTAGGCAACAGTGGCTTGCAAATGGAACTTCT 580 Query 514 CATAAAAAGGCCAAACTTCGAGAACCTACAATAAGCTGGAATGCAACATATGAGAGCTTG 573 || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 581 CAAAAAAAGGCCAAAGTTCGAGAACCTACAATAAGCTGGAATGCAACATATGAGAGCTTG 640 Query 574 TTGGGTATGAACAAGCGGTTTTCTCGTCCAATACCTCTCCCTGAAATGGTCGATTTTCTG 633 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || Sbjct 641 TTGGGTATGAACAAGCGGTTTTCTCGTCCAATACCACTCCCTGAAATGGTGGATTTTTTG 700 Query 634 GTGGATGTGTGGGAGCAAGAAGGCTTGTATGATTGATTTGCAACTCTTGAAACTTAATTT 693 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 701 GTGGATGTGTGGGAGCAAGAAGGCTTGTATGATTGATTTGCAACTCTTTAAACTTAATTT 760 Query 694 GGTTTCATCTTTTTTCTTTCTTTAATGTGTGTAATCAAAA-ATTTCCGGAACTTGGATTT 752 |||||||||||| |||| | | ||||||||||||||| | | ||||||||||| Sbjct 761 AGTTTCATCTTTT--CTTT-T--A-TGTGTGTAATCAAAAGAA----G-AACTTGGATTT 809 Query 753 TTAAACCTGGCTTCCTGA 770 ||| || ||||||||||| Sbjct 810 TTAGACTTGGCTTCCTGA 827 Score = 244 bits (132), Expect = 7e-64 Identities = 150/159 (94%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 1 ACACGCATAACTaaaggaagaagaagacgaagaaaaaaaaaacgaacaaagaagaagaag 60 ||||||||||||||| ||||||||||| || ||||||||||||||||| |||||||| | Sbjct 1 ACACGCATAACTAAACGAAGAAGAAGAAAAAAAAAAAAAAAACGAACAACGAAGAAGACG 60 Query 61 aagacgaagaaacaaagataaagGCTTTAGATTTAGCTGCAAGGGAGGTGGCGGAACAAA 120 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 61 AAGACGAAGAAACAAAGATAAAGGCTTTAGATTTAGCTGCAGGGGAGGTGGCGGAACAAA 120 Query 121 ACCCTAATCCCAATTTTCCTCGAATATGCCATTTTTGAG 159 |||||||||| |||||||| ||||||||||||||||||| Sbjct 121 ACCCTAATCCTAATTTTCCCCGAATATGCCATTTTTGAG 159 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37424439515 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5