BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489455 Length=255 Score E Sequences producing significant alignments: (Bits) Value AT5G26114.1 | Symbols: | unknown protein; Has 30201 Blast hits... 361 2e-99 > AT5G26114.1 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:9120688-9120960 REVERSE LENGTH=273 Length=273 Score = 361 bits (195), Expect = 2e-99 Identities = 236/256 (92%), Gaps = 2/256 (1%) Strand=Plus/Plus Query 1 ATGGTCCTTAAACGTGCCGTTGAGGAGGATAAATCTGTGAGGAATAAGAAACTGAAGGCG 60 |||||||| ||||||| | ||||||||||||||||||||||| ||||||||||| || Sbjct 1 ATGGTCCTCAAACGTGACAAGGAGGAGGATAAATCTGTGAGGAAGAAGAAACTGAACGCA 60 Query 61 GAGAATTCGATTCTGATACGT-CCAATTATACTTGGAGAGAGATGTAGGGTTCTTGATGC 119 || |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||| Sbjct 61 GATAATTCGATTCTGGTAC-TCCCAATTATACTTGGAGAGAGATGTAGGGTTCTTGATGC 119 Query 120 GGAAGAAGGAGATGAAGAACATAGCCAAAGAATGCCAAAGAACCGAATATATCGTCCTAG 179 |||||||||||||||||| || |||||||||||| || ||||| |||||||||||||||| Sbjct 120 GGAAGAAGGAGATGAAGATCAAAGCCAAAGAATGGCAGAGAACAGAATATATCGTCCTAG 179 Query 180 ATCCATGAGTTCGATCTCGATTTCGAGAACTAACTCGAACATCGATATGAATGCAATTCC 239 |||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct 180 ATCCATGAGTTCGATCTCGATTTCGAGAACCAAGTCGAACATCGATATGAATGCTATTCC 239 Query 240 CGTAGAAGTAACATCA 255 |||||||||||||||| Sbjct 240 CGTAGAAGTAACATCA 255 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11611850019 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5