BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489503
Length=1523
Score E
Sequences producing significant alignments: (Bits) Value
AT5G26751.1 | Symbols: ATSK11, SK 11 | shaggy-related kinase 11... 2115 0.0
AT3G05840.2 | Symbols: ATSK12 | Protein kinase superfamily prot... 1319 0.0
AT1G06390.1 | Symbols: GSK1, ATGSK1, ATSK22, SK22, BIL2, ATSK2-... 353 2e-96
> AT5G26751.1 | Symbols: ATSK11, SK 11 | shaggy-related kinase
11 | chr5:9399377-9402476 REVERSE LENGTH=1666
Length=1666
Score = 2115 bits (1145), Expect = 0.0
Identities = 1430/1559 (92%), Gaps = 53/1559 (3%)
Strand=Plus/Plus
Query 1 AAACCCACAAATCCTTAATCGTACGGA--TCTCTCTC-TTCGTATCCTAATTC--ATCTT 55
||||||||||||||||| ||||||||| |||||||| || ||||||||||| ||||
Sbjct 120 AAACCCACAAATCCTTACTCGTACGGATCTCTCTCTCTTTAATATCCTAATTCTTCTCTT 179
Query 56 CCTCGATCTGAGA-TTTTAGGTTTTCTTCCAG-AT-AAAGAAAGAAACTATTTTTGTAGC 112
| ||||||||||| ||||| |||||| | | | | |||| | || | |||||||||
Sbjct 180 CATCGATCTGAGATTTTTACGTTTTCAT-CGGCTTGAAAGTTTG-AA-GAGTTTTGTAGC 236
Query 113 TTGAAAAATGGCATCAGTGGGTATAGCTCCTAATCCTGGGGCAAGAGACTCTACTACACA 172
||||||||||| |||||||||||||||||||||||||| ||||||| ||
Sbjct 237 CTGAAAAATGGCGTCAGTGGGTATAGCTCCTAATCCTGGAGCAAGAG----------AC- 285
Query 173 TACTACTGGTGTTGATAAATTACCTGAAGAAATGAATGACATGAAAATTCGTGACGATAA 232
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 286 T-CTACTGGTGTTGATAAATTGCCTGAAGAAATGAATGACATGAAAATTCGTGACGATAA 344
Query 233 AGAAATGGAAGCGACAGTGGTAGATGGAAATGGAACAGAGACTGGACATATCATAGTGAC 292
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 345 AGAAATGGAAGCGACAGTGGTAGATGGAAATGGAACAGAGACTGGACATATCATTGTGAC 404
Query 293 TACTATTGGTGGAAGAAATGGCCAACCAAAACAGACAATTAGCTACATGGCTGAACGTGT 352
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 405 TACTATTGGTGGTAGAAATGGCCAACCAAAACAGACAATTAGCTACATGGCTGAGCGTGT 464
Query 353 TGTTGGACATGGATCTTTTGGTGTTGTGTTCCAAGCGAGATGTCTTGAGACGGGAGAAAC 412
|||||| || |||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 465 TGTTGGTCACGGATCTTTTGGTGTTGTGTTCCAAGCGAAATGTCTTGAGACAGGAGAAAC 524
Query 413 TGTTGCGATAAAGAAAGTTTTACAAGATAGGAGGTACAAGAATCGTGAGCTTCAAACCAT 472
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 525 TGTTGCGATAAAGAAAGTTTTACAAGATAGGAGGTACAAGAACCGTGAGCTTCAAACCAT 584
Query 473 GAGGCTACTTGACCATCCTAATGTTGTGTCTTTGAAACACTGCTTCTTTTCAACCACTGA 532
||||||||||||||||||||||||||||||| ||||||| || ||||| |||||||||||
Sbjct 585 GAGGCTACTTGACCATCCTAATGTTGTGTCTCTGAAACATTGTTTCTTCTCAACCACTGA 644
Query 533 AAAAGATGAGCTTTACCTCAATCTTGTTCTTGAATACGTCCCAGAAACTGTGCATCGTGT 592
||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||
Sbjct 645 AAAAGATGAGCTTTACCTCAATCTTGTTCTTGAGTACGTTCCAGAAACTGTTCATCGTGT 704
Query 593 TATCAAACACTATAACAAACTGAACCAGAGAATGCCTCTCATATACGTCAAGCTATACAC 652
|||||||||||| ||||||||||| |||||||||||||| ||||||||||| || |||||
Sbjct 705 TATCAAACACTACAACAAACTGAATCAGAGAATGCCTCTTATATACGTCAAACTTTACAC 764
Query 653 TTATCAGATTTTTAGGGCCTTATCTTACATTCACCGATGTATTGGTGTGTGTCACCGTGA 712
||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 765 TTATCAGATTTTTAGAGCCTTATCTTACATTCACCGATGCATTGGTGTGTGTCATCGTGA 824
Query 713 CATAAAGCCTCAAAACTTGTTGGTAAATCCGCACACTCATCAAGTAAAACTATGTGATTT 772
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 825 CATAAAACCTCAAAACTTGTTGGTAAATCCGCACACTCATCAAGTAAAGCTATGTGATTT 884
Query 773 TGGAAGTGCAAAAGTATTGGTAAAAGGAGAACCAAACATCTCCTACATCTGCTCGAGGTA 832
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 885 TGGAAGTGCAAAAGTATTGGTAAAAGGAGAACCAAACATTTCCTACATCTGCTCGAGGTA 944
Query 833 TTACAGAGCACCTGAACTTATTTTTGGAGCAACTGAGTATACAACAGCCATTGATGTCTG 892
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 945 TTACAGAGCACCTGAACTTATTTTTGGAGCAACCGAGTATACGACAGCCATTGATGTCTG 1004
Query 893 GTCTGCGGGATGTGTTCTAGCTGAACTATTACTTGGACAGCCTTTGTTCCCTGGTGAGAG 952
|||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1005 GTCTGCAGGATGTGTTCTAGCTGAACTATTGCTTGGACAGCCCTTGTTCCCTGGTGAGAG 1064
Query 953 CGGTGTTGATCAACTTGTAGAGATTATCAAGGTCTTGGGAACGCCTACTAGGGAAGAAAT 1012
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1065 CGGTGTTGATCAACTTGTAGAGATTATCAAGGTCTTGGGAACGCCTACTAGAGAAGAAAT 1124
Query 1013 CAAGTGTATGAACCCTAACTACACAGAATTCAAATTCCCTCAGATTAAAGCTCATCCATG 1072
|||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1125 CAAGTGCATGAACCCAAACTACACGGAATTCAAATTCCCTCAGATTAAAGCTCATCCATG 1184
Query 1073 GCACAAGATTTTCCACAAACGCATGCCTCCAGAAGCTGTTGATTTGGTCTCAAGACTTCT 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCACAAGATTTTCCACAAACGCATGCCTCCAGAAGCTGTTGATTTGGTCTCAAGACTTCT 1244
Query 1133 TCAATACTCTCCTAATCTACGAAGTGCCGCTCTCGACACATTGGTCCACCCATTCTTTGA 1192
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1245 TCAATACTCTCCTAATCTACGAAGTGCCGCTCTCGACACATTAGTCCACCCATTCTTTGA 1304
Query 1193 TGAGCTAAGAGACCCAAACGCACGTCTACCTAATGGACGTTTCCTTCCACCACTTTTCAA 1252
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1305 TGAGTTAAGAGACCCAAACGCACGTCTACCTAATGGACGTTTCCTTCCACCGCTTTTCAA 1364
Query 1253 CTTCAAGCCTCACGAGCTGAAAGGTGTACCATTGGAGATGGTATCTAAGTTAGTACCTGA 1312
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1365 CTTCAAGCCTCACGAGCTGAAAGGTGTACCATTGGAGATGGTAGCTAAGTTAGTACCTGA 1424
Query 1313 GCATGCAAGGAAGCAGTGTCCTTGGCTCGGTTTGTGATTTCCT-TAAA---ACCCT-AA- 1366
||||||||||||||||||||||||||||||||||||||||||| | || | | | ||
Sbjct 1425 GCATGCAAGGAAGCAGTGTCCTTGGCTCGGTTTGTGATTTCCTCTTAATGTAGCATGAAC 1484
Query 1367 A-ATGTAGCA-TGA--ACACA--ACA-CTCTATGTATCAATATGTTACAGTCTGATATGT 1419
| | | || | | | | || |||||||||||||||||| ||| ||||||||
Sbjct 1485 ACAACAAACACTTCTTATAAATTACCTCTCTATGTATCAATATGTCACAAACTGATATGC 1544
Query 1420 ATCCTTTGTTTGTTGTATGAGTAGAGaaaaaaaGAGTTATTACTAT-------------A 1466
| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1545 ACCCTTTGTTTGTTGTATGAGTAGAGAAAAAAAGAGTTATTACTATGGTTGGTTGGTTCA 1604
Query 1467 -A-TGTAAAAGCCCACCAAGAATTTTTATCTAAGATAAAAGAGTTTGCTTCTTCTGCTT 1523
| |||||||||||||||||| |||||||||| |||||| ||||||||| |||||||||
Sbjct 1605 TAATGTAAAAGCCCACCAAGATTTTTTATCTA-GATAAA-GAGTTTGCTACTTCTGCTT 1661
> AT3G05840.2 | Symbols: ATSK12 | Protein kinase superfamily protein
| chr3:1740020-1743163 FORWARD LENGTH=1672
Length=1672
Score = 1319 bits (714), Expect = 0.0
Identities = 1074/1247 (86%), Gaps = 28/1247 (2%)
Strand=Plus/Plus
Query 120 ATGGCATCAGTGGGTATAGCTCCTAAT-CCTGGGGCAAGAGACTCTACT--ACACATACT 176
||||| || ||||| |||| |||| | || | || ||||| |||||| | || | |
Sbjct 207 ATGGCCTCGGTGGGCATAGAGCCTAGTGCC-GCGGTTAGAGAATCTACTGGAAACGT--T 263
Query 177 ACTGGTGTTGATAAATTACCTGAAGAAATGAATGACATGAAAATTCGTGACGATAAAGAA 236
|||| || ||||| |||||| || || ||||| ||||||||||||| || |||||||||
Sbjct 264 ACTGATGCTGATAGATTACCCGAGGAGATGAAGGACATGAAAATTCAAGATGATAAAGAA 323
Query 237 ATGGAAGCGAC-AGTGGTAGATGGAAATG-GAACAGAGACTGGACATATCATAGTGACTA 294
|||||||| || | || || |||| |||| | || |||||||| ||||| ||||| ||||
Sbjct 324 ATGGAAGCTACGATTGTTA-ATGGCAATGTG-ACTGAGACTGGCCATATAATAGTAACTA 381
Query 295 CTATTGGTGGAAGAAATGGCCAACCAAAACAGACAATTAGCTACATGGCTGAACGTGTTG 354
|||| || |||||||||||||| |||||||||||||| || |||||||| || || ||||
Sbjct 382 CTATAGGAGGAAGAAATGGCCAGCCAAAACAGACAATCAGTTACATGGCGGAGCGAGTTG 441
Query 355 TTGGACATGGATCTTTTGGTGTTGTGTTCCAAGCGAGATGTCTT-GAGACGGGAGAAACT 413
|||||||||| || |||||||||||||| || || | |||| || || || |||||||||
Sbjct 442 TTGGACATGGCTCCTTTGGTGTTGTGTTTCAGGCCAAATGT-TTAGAAACAGGAGAAACT 500
Query 414 GTTGCGATAAAGAAAGTTTTACAAGATAGGAGGTACAAGAATCGTGAGCTTCAAACCATG 473
||||| |||||||||||| |||||||| |||||||||||||||||||||||||||| |||
Sbjct 501 GTTGCTATAAAGAAAGTTCTACAAGATCGGAGGTACAAGAATCGTGAGCTTCAAACAATG 560
Query 474 AGGCTACTTGACCATCCTAATGTTGTGTCTTTGAAACACTGCTTCTTTTCAACCACTGAA 533
||||||||||||||||| |||||||||||||||||||| || ||||| || || || |||
Sbjct 561 AGGCTACTTGACCATCCAAATGTTGTGTCTTTGAAACATTGTTTCTTCTCTACAACCGAA 620
Query 534 AAAGATGAGCTTTACCTCAATCTT-GTTCTTGAATACGTCCCAGAAACTGTGCATCGTGT 592
|||||||||||||| ||||| ||| ||||| |||||||| || ||||||||||| || ||
Sbjct 621 AAAGATGAGCTTTATCTCAA-CTTGGTTCTGGAATACGTTCCGGAAACTGTGCACCGCGT 679
Query 593 TATCAAACACTATAACAAACTGAACCAGA-GAATGCCTCTCATATACGTCAAGCTATACA 651
||||||||||| |||||||| ||||| | ||||||||||| | |||||||| || ||||
Sbjct 680 CATCAAACACTACAACAAACTTAACCA-ACGAATGCCTCTCGTTTACGTCAAACTTTACA 738
Query 652 CTTATCAGATTTTTAGGGCCTTATCTTACATTCACCGATGTATTGGTGTGTGTCACCGTG 711
||||||||||||||||| ||||||| ||||||||||||||||| || || ||||| || |
Sbjct 739 CTTATCAGATTTTTAGGTCCTTATCCTACATTCACCGATGTATCGGCGTATGTCATCGAG 798
Query 712 ACAT-AAAGCCTCAAAACTTGTTGGTAAATCCGCACACTCATCAAGTAAAACTATGTGAT 770
|||| ||| ||||||||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct 799 ACATCAAA-CCTCAAAACTTGTTGGTAAATCCACACACTCATCAAGTGAAACTATGCGAT 857
Query 771 TTTGGAAGTGCAAAAGTATTGGTAAAAGGAGAACCAAACATCTCCTACATCTGCTCGAGG 830
||||||||||| ||||||||||| |||||||| |||||||| || ||||| |||||||||
Sbjct 858 TTTGGAAGTGCGAAAGTATTGGTTAAAGGAGAGCCAAACATTTCATACATTTGCTCGAGG 917
Query 831 TATTACAGAGCACCTGAACTTATTTTTGGAGCAACTGAGTATACAACAGCCATTGATGTC 890
||||||||||||||||| || ||||||||||| || |||||||| |||||||||||||||
Sbjct 918 TATTACAGAGCACCTGAGCTCATTTTTGGAGCCACCGAGTATACTACAGCCATTGATGTC 977
Query 891 TGGTCTGCGGGATGTGTTCTAGCTGAAC-TATTACTTGGACAGCCTTTGTTCCCTGGTGA 949
|||||||| ||||||||||| || || | | || || || ||||| |||||||| |||||
Sbjct 978 TGGTCTGCAGGATGTGTTCTCGCCGAGCTTCTT-CTCGGGCAGCCATTGTTCCCGGGTGA 1036
Query 950 GAGCGGTGTTGATCAACTTGTAGAGATTATCAAGGTCTTGGGAACGCCTACTAGGGAAGA 1009
|||||||||||||||||||||||||||||| ||||| |||||||| || || ||||||||
Sbjct 1037 GAGCGGTGTTGATCAACTTGTAGAGATTATAAAGGTTTTGGGAACACCAACAAGGGAAGA 1096
Query 1010 AATCAAGTGTATGAACCCTAACTACACAGAATTCAAATTCCCTCAGATTAAAGCTCATCC 1069
|||||| || |||||||| || |||||||| |||||||| ||||||||||||||||||||
Sbjct 1097 AATCAAATGCATGAACCCGAATTACACAGAGTTCAAATTTCCTCAGATTAAAGCTCATCC 1156
Query 1070 ATGGCACAAGATTTTCCACAA-ACGCATGCCTCCAGAAGCTGTTGATTTGGTCTCAAGAC 1128
|||||| |||||||||||||| | | |||||||||||||||||||||||||||||||| |
Sbjct 1157 ATGGCATAAGATTTTCCACAAGA-GAATGCCTCCAGAAGCTGTTGATTTGGTCTCAAGGC 1215
Query 1129 TTCTTCAATACTCTCCTAATCTACGAAGTGCCGCTCTCGACACATTGGTCCACCCATTCT 1188
|||||||||||||||| ||||| || |||| ||||| || ||||||||||||||||||
Sbjct 1216 TTCTTCAATACTCTCCCAATCTCCGTTGTGCTGCTCTTGATTCATTGGTCCACCCATTCT 1275
Query 1189 TTGATGAGCTAAGAGACCCAAACGCACG-TCTACCTAATGGACGTTTCCTTCCACCACT- 1246
|||| ||||||||||| || || || || | |||| || ||||||||||||||||| ||
Sbjct 1276 TTGACGAGCTAAGAGATCCGAATGCGCGAT-TACCCAACGGACGTTTCCTTCCACCGCTC 1334
Query 1247 TTTCAACTTCAAGCCTCACGAGCTGAAAGGTGTACCAT-TGGAGATGGTATCTAAGTTAG 1305
||| ||||| |||||||| || || |||||||| || | |||||||||| | |||||||
Sbjct 1335 TTT-AACTTTAAGCCTCATGAACTTAAAGGTGTGCC-TGTGGAGATGGTGGCGAAGTTAG 1392
Query 1306 TACCTGAGCATGCAAGGAAGCAGTGTCCTTGGCTCGGTTTGTGATTT 1352
| || || ||||| |||||||| ||||| |||||| |||||||||||
Sbjct 1393 TTCCAGAACATGCGAGGAAGCAATGTCCGTGGCTCAGTTTGTGATTT 1439
> AT1G06390.1 | Symbols: GSK1, ATGSK1, ATSK22, SK22, BIL2, ATSK2-3
| GSK3/SHAGGY-like protein kinase 1 | chr1:1946788-1950755
FORWARD LENGTH=1634
Length=1634
Score = 353 bits (191), Expect = 2e-96
Identities = 755/1020 (74%), Gaps = 68/1020 (7%)
Strand=Plus/Plus
Query 273 ACTGGACATATCATAGT-GACTACTATTGGTGG-AAGAAATGGCCAACCAAAACAGACAA 330
||||| |||||||| | ||||||||||| || || ||| ||| ||||||| ||||| |
Sbjct 217 ACTGGTCATATCAT-TTCCACTACTATTGGAGGCAA-AAACGGCGAACCAAAGCAGACCA 274
Query 331 TTAGCTACATGGCTGAACGTGTTGTTGG-ACATGGATCTTTTGGTG-TTGTGTTCCAAGC 388
|||| ||||||||||| || |||||||| ||| || || || || | |||| || || ||
Sbjct 275 TTAGTTACATGGCTGAGCGGGTTGTTGGAACA-GGTTCATTCGG-GATTGTTTTTCAGGC 332
Query 389 GAGATGTCTT-GAGACGGGAGAAACTGTTGCGA-TAAAGAAAGTTTTACAAGATAGGA-G 445
|| ||| ||| || || |||||| | || || | |||| || || || |||||| || |
Sbjct 333 GAAATG-CTTGGAAACTGGAGAATCAGTAGCCATTAAA-AAGGTCTTGCAAGAT-CGACG 389
Query 446 GTACAAGAATCGTGAGCTT-CAAAC-CATGAGGCTACTTGACCATCCTAATGTTGTGTCT 503
|| || || |||||| || | ||| ||| | | | | || || || ||||| | ||
Sbjct 390 CTATAAAAACCGTGAG-TTGC-AACTAATGCGACCAATGGATCACCCAAATGTCATCTCC 447
Query 504 TTGAAACACTGCTTCTTTTCAACCACTGA-AAAAGATGAGCT-TTACCTCAATCTTGTTC 561
||||| ||||| ||||| || || || || | ||||||||| || |||||| ||||||
Sbjct 448 TTGAAGCACTGTTTCTTCTCTACAAC-GAGTAGAGATGAGCTCTT-CCTCAACCTTGTTA 505
Query 562 TTGAATACGTCCCAGAAACTGTGCATCGTGTTATCAAACACTATAAC-A-AACTGAACCA 619
| || || || || || ||| | | || ||| | | |||||| || | || || ||
Sbjct 506 TGGAGTATGTACCTGAGACTTTATACCGGGTTTTGAGGCACTAT-ACTAGTTCT-AATCA 563
Query 620 GAGAATGCCTCTCATATACGTCAAGCTATACACTTATCAGATTTTTAG-GGCCTTATCTT 678
||| ||||| | | || |||||||| ||||| ||||| || ||||| || || |||
Sbjct 564 GAGGATGCCAATTTTCTATGTCAAGCTTTACACATATCAAATCTTTAGAGG-TTTGGCTT 622
Query 679 ACATTCACCGA-TG-TATTGGTGTGTGTCACCGTGACAT-AAAGCCTCAAAACT-TGTTG 734
||| || | | || | ||||| || ||| | || | ||| || ||||| | | |||
Sbjct 623 ACA-TC-CATACTGTTCCCGGTGTTTGCCACAGAGATGTGAAA-CCACAAAA-TCTCTTG 678
Query 735 GTAAATCCGC-ACACTCATCAAGTAAAACTATGTGATTTTGGAAGTGCAAAAGTATTGGT 793
|| |||| | || ||||| || || || |||||||||||||||||||||||||||||
Sbjct 679 GTTGATCC-CTTGACCCATCAGGTTAAGCTGTGTGATTTTGGAAGTGCAAAAGTATTGGT 737
Query 794 AAAAGGAGAACCAAACATCTCCTACATCTGCTCGAGGTATTA-CAGAGCACCTGAACTTA 852
||||| ||||||||||| || || |||||||| | ||||| | | || || ||||| |
Sbjct 738 CAAAGGTGAACCAAACATATCATATATCTGCTCCCGTTATTATC-GTGCTCCAGAACTGA 796
Query 853 TTTTTGGAGCAACTGAGTATACAACAGCCATTGATGTCTGGTCTGCGGGATGTGTTCTAG 912
| ||||| || || ||||||||| || |||| ||| | |||||||| || ||||| || |
Sbjct 797 TCTTTGGCGCCACAGAGTATACAGCATCCATAGATATATGGTCTGCTGGTTGTGTACTGG 856
Query 913 CTGAACTA-TTACTTGGACAGCCTTTGTTCCCTGGTGAGAGCGGTGTTGATCAACTTGTA 971
| || || || || || ||||| || || || || || | |||||||| |||||
Sbjct 857 CAGAGCTTCTT-CTGGGCCAGCCGTTATTTCCAGGAGAAAATTCAGTTGATCAGCTTGTG 915
Query 972 GAGATTATCAAGGT-CTTGGGAACGCCTACTAGGGAAGAAAT-CAAGTGTATGAACCCTA 1029
||||| || ||||| ||||| | | || ||| | |||||||| | | ||||||||||| |
Sbjct 916 GAGATCATAAAGGTTCTTGGTA-CTCCAACTCGTGAAGAAATTCGA-TGTATGAACCCGA 973
Query 1030 ACTACACAGAATTCAAATTCCCTCAGATTAAAGCTCATCCATGGCACAAGATTTTCCACA 1089
|||||||||| || | ||||| || || |||||||| || ||||||||| |||| || |
Sbjct 974 ACTACACAGATTTTAGGTTCCCACAAATCAAAGCTCACCCTTGGCACAAGGTTTTTCATA 1033
Query 1090 AACGCATGCCTCCAGAAGCTGTTGAT-TTGG-TCTCAAGACTTCTTCAATACTCTCCTAA 1147
|||| |||||||||||||| | || ||| |||| | ||||||||||| || || ||
Sbjct 1034 AACGGATGCCTCCAGAAGCAATAGACCTTGCATCTCG-G-CTTCTTCAATATTCACC-AA 1090
Query 1148 -TCTACGAAGTGC-C-GCTCTCGACA-CAT-TGGTCCACCCATTCTTTGA-TGAGCTAAG 1201
|||||| ||| | || ||||| | ||| || || | || || ||| | ||| || |
Sbjct 1091 GTCTACGC--TGCACTGCGCTCGA-AGCATGTGCTC-ATCCGTT-TTTCAATGAACTCCG 1145
Query 1202 AGACCCAAACGCACGTCTACCTAATGGACGTTTCC-TT-CCACCACTT-TTCAACTTCAA 1258
||| |||||||| ||||| || ||||| ||| || || || ||| || ||||| |||||
Sbjct 1146 AGAGCCAAACGCCCGTCTTCCAAATGGTCGT--CCATTACCGCCA-TTGTTCAATTTCAA 1202
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75150215865
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5