BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489520 Length=3332 Score E Sequences producing significant alignments: (Bits) Value AT5G26910.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 4867 0.0 > AT5G26910.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58650.1); Has 1322 Blast hits to 684 proteins in 162 species: Archae - 4; Bacteria - 497; Metazoa - 157; Fungi - 101; Plants - 155; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). | chr5:9465929-9470403 REVERSE LENGTH=3404 Length=3404 Score = 4867 bits (2635), Expect = 0.0 Identities = 3136/3368 (93%), Gaps = 73/3368 (2%) Strand=Plus/Plus Query 1 GGAGTGAGAGACTGGGAAAATTCAAAACACTCTGTTGTTtctctctctcctctctcactc 60 ||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||||| Sbjct 1 GGAGTGAGAAACTGGGAAAATTCAAAACACTC---TGTTTCTCTCTCT-C-CTCTCACTC 55 Query 61 ttcgcctctcttctctcGTCACATCAATCCACACTGTGAAGTATCTGtttttttcttctt 120 |||| |||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 56 TTCG-TTCTCTTCTCTCGTCACATCAATCCACACTGTGAAGTATCTGTTTTTTT-TT-TT 112 Query 121 ttttAATTTCTCAAGTTCTCTGCTGCAACTATTGGTC--TCTGTCT-TCCCT--A-CCCA 174 ||||| ||| |||||||||||||||| |||||||||| ||| ||| | ||| | |||| Sbjct 113 TTTTAGTTTTTCAAGTTCTCTGCTGCTACTATTGGTCTGTCT-TCTCTACCTAAATCCCA 171 Query 175 AATCCCAAATCTTTAAAT-T-CTA--ATCTAACCTTACTTCGTCCTGGATTGATTTAACC 230 ||||||||||| |||| | || |||||||||||||||||||| ||||||||||| Sbjct 172 AATCCCAAATC-CCAAATCTAGTATCATCTAACCTTACTTCGTCCTCTTTTGATTTAACC 230 Query 231 T-TTTCTCTGATCTGACCCATTTCTCAAGACTCTCTCTTTCTTCTAAGATTCATTGGTGT 289 | |||||||||||||||||||||||||||| |||||||||||||| | |||||||||||| Sbjct 231 TCTTTCTCTGATCTGACCCATTTCTCAAGAATCTCTCTTTCTTCTTA-ATTCATTGGTGT 289 Query 290 TTTAACCTTTTCATCGATTCCAATTCTCAATTGTTGTCTGTTTGAGGAACACAAGA--CC 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 290 TTTAACCTTTTCATCGATTCCAATTCTCAATTGTTGTCTGTTTGAGGAACACAAGACCCC 349 Query 348 CCC-TCCCCTTGTGTTGGTCGCTTCTAGGGCTAGATCTTCTCGTAACGCTAAAGTTTAGG 406 ||| |||||| |||||| ||||||||||||||||||||||| | ||||| |||||||||| Sbjct 350 CCCTTCCCCTAGTGTTGCTCGCTTCTAGGGCTAGATCTTCTGGGAACGCGAAAGTTTAGG 409 Query 407 TTTTTAATCAATTTTTGTGTGTGAATAGTCTGCAGCATTTCTGGGTTTTGGTTCCCGTGG 466 | ||||||| | ||||||| || || |||| |||||||||||||||||| |||||||| | Sbjct 410 TCTTTAATCGA-TTTTGTGCGTAAACAGTCCGCAGCATTTCTGGGTTTTTGTTCCCGTTG 468 Query 467 CTGCATTTTGCT-GTAAACGTGTCGAATTC--G-A-TTGA----TTTCTCCACAAGGGTC 517 || ||||||| | || |||||||||||||| | | |||| ||||| |||||||||| Sbjct 469 CTACATTTTGTTGGT-AACGTGTCGAATTCGAGAATTTGATTGGTTTCTTCACAAGGGTC 527 Query 518 TCTGGAATTAACCC-AAATTGGAGTGAGCTCATAAGTTAAAGTTGAGATCTTTGTAACCG 576 |||||| ||||||| |||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 528 TCTGGAGTTAACCCAAAATTGGAATGAGCTCATAAGTTAAAGTTGAGGTCTTTGTAACCT 587 Query 577 ATAGGTAAAATTAAAATGGAGGTTGTTGAGAGGAAACGATCCAGAGGAGGGTTTTTAAAT 636 ||| | || | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 588 TTAGATGAACTAAAAATGGAGGTTGTTGAGAGGAAACGATCCAGAGGAGGGTTTTTAAAT 647 Query 637 TTATTTGATTGGCATGGAAAACCCCGGAAGAAGCTCTTCTCCGGCAGCAGCTC-GCAACT 695 ||||||||||||||||||||| |||| |||||||||||||||||||||| ||| | |||| Sbjct 648 TTATTTGATTGGCATGGAAAATCCCGCAAGAAGCTCTTCTCCGGCAGCACCTCAG-AACT 706 Query 696 CTCAGAATCAAAGCAGA-CAAAACAGACTGCTCAAAACCTCTTGAAGGCGAGGGTTTCTC 754 ||||| ||| | | |||| ||| |||| ||||||||||||||| |||||||||||| Sbjct 707 CTCAG-----AAG-A-ATCAAAGCAGCCTGCACAAAACCTCTTGAAGTCGAGGGTTTCTC 759 Query 755 TTATTGAGGTTGATGAGATTGGAAAAAGTTCAAGTTACAACCCGAGAAGTGACTCGAGCT 814 ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| Sbjct 760 TTATTGAGGTTGATGAGATTGGAAAGAGTTCAAGTAACAACCAGAGAAGTGACTCGAGCT 819 Query 815 GTTGTGCATCTTCTGTTACCAGTGATGATGGACAGGGAACAAGAGCCCCGAGTGTGGTTG 874 ||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||| Sbjct 820 GTTGTGCATCTTCAGTAACCAGTGATGATGGACAGGGGACAAGAGCCCCGAGTGTGGTTG 879 Query 875 CGAGGCTTATGGGTTTAGAGTCTCTACCGGTACCAAATTTCCAGGAACCTCGACTTAATC 934 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 880 CGAGGCTTATGGGTTTAGAGTCTCTACCGGTACCAAATGTCCAGGAACCTCGACTTAATC 939 Query 935 CCGATCTTGATCCGTTCTT-CGTTAGACCTTCACGAAACACTAATAGATGGGATGCATAT 993 ||||||||||||||||||| | | |||||||||| ||||||||| ||||||||||||||| Sbjct 940 CCGATCTTGATCCGTTCTTAC-TCAGACCTTCACAAAACACTAACAGATGGGATGCATAT 998 Query 994 GAGAATCTTGGTTATGTAAATCTCCGTAGTGACTATAATGGTATTTCCTGGGACCATTTG 1053 |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 999 GAGAATCTTGGTTATGTAAATCTCCGTAGTGACTATGATGGTATTTCTTGGGACCATTTG 1058 Query 1054 GATTCAAGAACGAATAATGGGCGCAACCAACCGATTGAACGGTTTCAATCTGAGACTTTT 1113 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1059 GATTCTAGAACGAATAATGGGCGCAACCAACCGATTGAACGGTTTCAGTCTGAGACTTTT 1118 Query 1114 CCTCCCAGGTCAGCTACACCGATATGTGTTACCAACAATAGACACCTGTCTCCTATCCGT 1173 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1119 CCTCCCAGGTCAGCTAAACCGATATGTGTTACCAACAATAGACACCTGTCTCCTATCCGG 1178 Query 1174 AGTCCTGGATTTGTCCCGTCCAGGAACCCTATTTATGTAATGGAAGCGGCTTCAAGAATG 1233 |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 1179 AGTCCTGGGTTTGTCCCATCCAGGAACCCTATTTATGTTATGGAAGCGGCTTCAAGAATG 1238 Query 1234 ATTGAACCAAGACCTAGGATGGTTGCTAGAACACGGTTTTCACCATCTAATTCTTCTTCA 1293 ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| ||||| Sbjct 1239 ATTGAACCAAGTCCTAGGATGGTTGCTAGAACACGGTTTTCGCCATCGAATTCTCCTTCA 1298 Query 1294 TCAGTTCCTATGAGGATTCAAGATTTAAGAGAGAAATTAGAAGCTGCACAGAAAGAGTCT 1353 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1299 TCAGTTCCTATGAGGATTCAAGATTTAAGAGAGAAATTAGAAGCTGCACAGAAAGTGTCT 1358 Query 1354 AGCCGTCAAATCTCTAATGATACCTTCAACCTTAAGTACCCAAGTGGAAAGCACAACGAG 1413 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1359 AGCCGTCAAAACTCCAATGATACCTTCAACCTTAAGTACCCAAGTGGAAAGCACAACGAG 1418 Query 1414 AAGAGAACCGCAACATCACTCATGACACCGTCAACTAGTAAGTTCATGGGAAAAAGCAGT 1473 ||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct 1419 AAGAGAATTACAACATCACTCACGACACCGTCAACTAGTAAGTTCATGGGGAAAAGCAGT 1478 Query 1474 TCTGATGGTTTGAAGGGTAAAGTGAAGCCATCTTATGTATCAACACAAGCGAAGACCAGT 1533 |||||||||||||||||||||||||||||||||||||||| ||||||| ||| || || Sbjct 1479 ACTGATGGTTTGAAGGGTAAAGTGAAGCCATCTTATGTATCCGCACAAGCAAAGGCCGGT 1538 Query 1534 ACAACGCCCTTAAGTGTCACCAGAAACTCTGCAAACCAAAAGGAGAAGGCAGAAGCTAAA 1593 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1539 ACAACGCCCTTAAGTGTCACCAGAAACTCTGCAAACCAAAAGGAGAAGGCAGACGCTAAA 1598 Query 1594 AAATGCGTAGCCAAAAGCCAGAATGGTCTCAGAGGAGCTCCCATTAACTTGGGAAAG--- 1650 || ||||||| |||||||||||||| |||||||||||||||||||| | |||||||| Sbjct 1599 AAGTGCGTAGTCAAAAGCCAGAATGCTCTCAGAGGAGCTCCCATTAGCATGGGAAAGAAT 1658 Query 1651 A-G--TAAGCAGAATAACCACAAACAGAACTGCAGAGACAACCAACCTTCAATGACCTCT 1707 | | ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1659 ATGTTTAAGCAGAATAACCAGAAACAGAACTGCAGAGACAACCAACCTTCGATGACCTCT 1718 Query 1708 GTTTTAAACCAAAAAGGCAGCAAAGTAAATAACAAAGTTGTAAACAAGGTTCCAGTGGAA 1767 ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1719 GTTTTGAACCAAAAAAGCAGCAAAGTAAATAACAAAGTTGTAAACAAGGTTCCAGTGGAA 1778 Query 1768 AGTGGATCGATATCAAAGCAGTCAGGTTTAACAACGGCTTCGACGGAAAAGAATACTTCT 1827 |||||||||||||||||||||| |||||| ||||||| ||| ||||||||||||||||| Sbjct 1779 AGTGGATCGATATCAAAGCAGTTGGGTTTATCAACGGCCTCGGCGGAAAAGAATACTTCT 1838 Query 1828 TTATCTTTGTCACGCAAAAAGACTCTTCCCCGGAGCAAAAGGCTCCCAAATGGGATGCAA 1887 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1839 TTATCTTTGTCACGCAAAAAGACTCTTCCCCGGAGCAAAAAGCTCCCAAATGGGATGCAA 1898 Query 1888 AAATCTGGAATCTCCGATGATAAACGGACCAAAAGAAGTGAGAATTTGATTAAATGTAAC 1947 |||||||||||||| |||||||||||||||||||| || || ||| |||| ||||||||| Sbjct 1899 AAATCTGGAATCTCTGATGATAAACGGACCAAAAGGAGCGAAAATATGATCAAATGTAAC 1958 Query 1948 ATCACCATTGATGGTGGCTTGAACAAAGGCAAAGATGATCGGAAAAAGGAAATGGATGTG 2007 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1959 ATCACCATTGATGGTGGCTTGAACAAAGGTAAAGATGATCGGAAAAAGGAAATGGATGTG 2018 Query 2008 ATTTCATTCACATTCTCATCCCCCATCAAAGGTTTATCATCTGATTCCCTATCCTCCACA 2067 |||||||||||||||||||| ||||||||||||||||| |||||||| ||||||| || Sbjct 2019 ATTTCATTCACATTCTCATCTCCCATCAAAGGTTTATCTTCTGATTCATTATCCTCTACT 2078 Query 2068 CAAGGAATTGGTCAAGACACAGACTCTGCAGTTAGTTTCAGTATGATTGGCGGCGATTCC 2127 |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 2079 CAAGGAATTGGTCAAGACACAGACTCTGCAGTTAGTTTCA--AT-ATTGGCGGCGATTCC 2135 Query 2128 TTAAATGTTCTGTTGGAGCAAAAGCTCAGAGAGCTGACTTCTAAGCTTGAGTCTTCTAGC 2187 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2136 TTAAATGCTCTGTTGGAGCAAAAGCTCAGAGAGCTGACTTCTAAGCTTGAGTCTTCTAGC 2195 Query 2188 TGTAGCCTGACCCAAGAAGAGTCTTCATGTTCCATTCCAAAGGATGAGGTGAACGGGATG 2247 ||||||||||||||||||||| |||||| ||||||||||| ||||||| ||||||||||| Sbjct 2196 TGTAGCCTGACCCAAGAAGAGCCTTCATATTCCATTCCAATGGATGAGATGAACGGGATG 2255 Query 2248 ATTTCATTTTCATCAGAGTATGAAAAGTCGACCCAAAACGGTCTAG-ATAAAGTTTTATC 2306 ||||||||||||||||| ||||||||||| |||||||||||||| | |||||||||||| Sbjct 2256 ATTTCATTTTCATCAGAATATGAAAAGTCAACCCAAAACGGTCT-GCGTAAAGTTTTATC 2314 Query 2307 GGAGAGTGAATCTGTTTCTGACTGCACCTCATTCTATGACAAACAAAAATTTCAGATACA 2366 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2315 AGAGAGTGAATCTGTTTCTGACTGCACCTCATTCTATGACAAACAAAAATTCCAGATACA 2374 Query 2367 AGCAGAAGAGCACGAAGTTAGCAGCATTAGCACTGTGACAGAAGCAGATGATCTCAGAAG 2426 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 2375 AGCAGAAGAGCACGAAGTTAGCAGCATTAGCACTGTGACGGAAGCAGATGATCTAAGAAG 2434 Query 2427 CTCCTGCAGCAAGGGTTTCTCAGATTGCAGACAGACCACAGAATATGGGACAATACAGTC 2486 ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 2435 CTCTTGCAGCAAGGGTTTCTCAGATTGCAGACAGACCGCAGAATATGGGACAATACAGTC 2494 Query 2487 CTCATCAGATCAAAAACTCACCTGGGTTTCATTAAATGAGTCGCACCAAGCACAAGACGA 2546 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2495 CTCATCAGATCAAGAACTCACCTGGGTTTCATTAAATGAGTCGCACCAAGCACAAGACGA 2554 Query 2547 GTCCGAGCTCTCAGAATCTGTAATAACACTGAGTTACTCAGAAGCCGAAGAAAGGCTTGA 2606 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct 2555 GTCCGAGCTCTCAGAATCTGTGGTAACACTGAGTTACTCAGAAGCCGAAGAAAGGCTCGA 2614 Query 2607 CTGGGAGCTT-GAGTACATATCCGAGATCCTCGGGTCTGACCAACTGATGGTGAAAGAAT 2665 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2615 CTGGGAG-TTCGAGTACATATCCGAGATCCTCGGGTCTGACCAACTGATGGTGAAAGAAT 2673 Query 2666 TTGCTCTGGGGATGGCCACTGACGTATTACCTGCGAGCCTCTTTGATGAAATGGAAGGCC 2725 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2674 ATGCTTTGGGGATGGCCACTGACGTATTACCTGCGAGCCTCTTTGATGAAATGGAAGGCC 2733 Query 2726 GAGGAGAAGCAACAGCAGCCAAAATCAAGAGAAAGACACTGTTTGATTTTGTCAATAATT 2785 ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 2734 GAGGAGAAGTAACAGCAGCCAAAATCAAGAGAAAGACACTGTTTGATTTTGTGAATAAGT 2793 Query 2786 GCTTAGCGCTCAAATGCGAG-AGGATGTTTATGGGTAGCTGCAGAGGGCTATTGGGCAAA 2844 |||||||||||| ||||||| | ||||||||||||||||||||||||||||||||| ||| Sbjct 2794 GCTTAGCGCTCAGATGCGAGCA-GATGTTTATGGGTAGCTGCAGAGGGCTATTGGGGAAA 2852 Query 2845 GGCGAGCTTTTGTTTGAACAAAGAGATTGGTTAGCagaagaactgaacagagagattcat 2904 |||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2853 GGCGGGTTTTTGTTTGAGCAAAGAGATTGGTTAGCAGAAGAACTGAACAGAGAGATTCAT 2912 Query 2905 gggttgaagaagatgagagagatgatgatggatgagCTTGTTGACAAAGAAATGAGCAGT 2964 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 2913 GGGTTGAAGAAGATGAGAGAGATGATGATGGACGAGCTTGTTGACAAAGAGATGAGCAGT 2972 Query 2965 TTCGAAGGGAGGTGGCTTGATTTCGAGAGAGAGACATATGAAGAAGGCATTGACATTGAG 3024 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2973 TTCGAAGGGAGATGGCTTGATTTCGAGAGAGAGACGTATGAAGAAGGCATTGACATTGAG 3032 Query 3025 GGAGAGATAGTCTCTACATTGGTTGATGATTTAGTTAATGATCTTGTCTCAGGTACTCAA 3084 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 3033 GGAGAGATAGTCTCTACGTTGGTAGATGATTTAGTTAATGATCTTGTCTCAGGTACTCAA 3092 Query 3085 AGAAGAACATTGAGGCAAAGGGAAGGGCTAGTTTGAATTTTCTACTTTAGTTGAGCCTGA 3144 ||||||||||||||||||||||||||| |||||| || |||||||||||||| | Sbjct 3093 AGAAGAACATTGAGGCAAAGGGAAGGGGTAGTTT-------CTGCTTTAGTTGAGCCTCA 3145 Query 3145 TCTTCTCTCGGCATTCTAGAAGCTTCTTCTAACAGTTTCTCTGACATGAGAATTGAGATG 3204 |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 3146 TCTTCTCTCGGCATTCTAGATGCTTCTTCTAATAGTTTCTCTGACATGAGAATTGAGATA 3205 Query 3205 AAGTTAAAGTAGCCAATATCGAGGAGCATTTTTCTCACAATGTAATTCACGAGCATTCCT 3264 |||| ||||||||||| ||||||||| ||||| |||||||||||||||||||| |||||| Sbjct 3206 AAGTGAAAGTAGCCAACATCGAGGAGAATTTT-CTCACAATGTAATTCACGAGAATTCCT 3264 Query 3265 TCTTTTATGGTTTCTACTTCCATTGAAAATGCAAATAATATGATCATTTTCCTTCATTCG 3324 | ||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct 3265 TATTTTATG-TTTCTACTTCTATTGAAAATGCAAATAATATGATCATTTTCTTTCATTCG 3323 Query 3325 TTCTGATG 3332 |||||||| Sbjct 3324 TTCTGATG 3331 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 165801746615 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5