BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489572 Length=1263 Score E Sequences producing significant alignments: (Bits) Value AT5G27550.1 | Symbols: | P-loop containing nucleoside triphosp... 2119 0.0 > AT5G27550.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:9727454-9731341 REVERSE LENGTH=2496 Length=2496 Score = 2119 bits (1147), Expect = 0.0 Identities = 1210/1241 (98%), Gaps = 2/1241 (0%) Strand=Plus/Plus Query 8 CTACTAAGCTTGGAACTCTGGAAAAACAGTACTTGGAAGAGTCATCAGAGAGGAAACGAT 67 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 323 CTACTAAGCTTGGAGCTCTTGAAAAACAGTACTTGGAAGAGTCATCAGAGAGGAAACGAT 382 Query 68 TATACAATGAAGTGATCGAACTCAAGGGAAATATCAGGGTCTTTTGCAGATGCAGGCCTC 127 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 383 TATACAATGAAGTGATCGAACTCAAGGGAAATATCAGAGTCTTTTGCAGATGCAGACCTC 442 Query 128 TAAACCAAGCTGAAATAGCAAATGGCTT-TGCTTCTGTAGCTGAGTTTGAGCCAACACAG 186 ||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||||| Sbjct 443 TAAACCAAGCTGAAATAGCCAATGG-TTGTGCTTCTGTAGCTGAGTTTGATACAACACAG 501 Query 187 GAAAACGAGCTCCAGATACTTTCATCTGATTCCTCCAAGAAGCATTTTAAGTTTGACCAT 246 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 502 GAAAACGAGCTCCAGATACTTTCATCTGATTCCTCCAAGAAGCATTTTAAATTTGACCAT 561 Query 247 GTTTTTAAGCCAGAAGATGGCCAAGAGGCTGTTTTTGCACAGACAAAACCTATAGTTACT 306 || |||||||| || |||||||||||| |||||||||||||||||||||||||||||||| Sbjct 562 GTCTTTAAGCCTGACGATGGCCAAGAGACTGTTTTTGCACAGACAAAACCTATAGTTACT 621 Query 307 TCGGTGCTGGATGGGTATAATGTCTGCATATCTGCCTATGGCCAAACTGGAACTGGCAAG 366 ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct 622 TCGGTGCTGGATGGGTATAATGTCTGCATATTTGCCTATGGCCAAACGGGAACTGGCAAG 681 Query 367 ACATTTACCATGGAGGGAACACCAGAGAATAGAGGAGTGAACTATAGGACCTTAGAAGAA 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 682 ACATTTACCATGGAGGGAACACCAGAGAATAGAGGAGTGAACTATAGGACCTTAGAAGAA 741 Query 427 CTATTTTGCTGTTCAGAAAGCAAACGTCATCTCATGAAGTTTGAGCTATCGGTTAGCATG 486 |||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct 742 CTATTTCGCTGTTCAGAAAGCAAAAGTCATCTCATGAAGTTTGAGCTATCAGTTAGCATG 801 Query 487 TTGGAGGTTTATAATGAGAAGATAAGGGACCTCTTGGTAGATAACTCAAACCAGCCCCCT 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 802 TTGGAGGTTTATAATGAGAAGATAAGGGACCTCTTGGTAGATAACTCAAACCAGCCCCCT 861 Query 547 AAAAAGTTGGAGGTTAAGCAATCAGCAGAAGGGACACAAGAAGTCCCAGGATTAGTCGAA 606 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 862 AAAAAGTTGGAGGTTAAGCAATCAGCAGAAGGGACGCAAGAAGTCCCAGGATTAGTCGAA 921 Query 607 GCTCAAGTTTACAATACAGATGGAGTGTGGGATCTGCTCAAGAAAGGATATGCTGTTCGG 666 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 922 GCTCAAGTTTACAATACAGATGGAGTGTGGGATCTGCTCAAGAAAGGATATGCTGTTCGA 981 Query 667 TCTGTGGGTTCAACTGCTGCAAATGAGCAAAGCAGCCGCTCTCATTGCTTGCTGCGAGTG 726 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 982 TCTGTGGGTTCAACTGCTGCAAATGAGCAAAGCAGCCGCTCTCATTGCTTGCTGCGAGTG 1041 Query 727 ACCGTGAAGGGAGAGAATTTGATAAATGGTCAGAGAACGAGAAGTCATCTTTGGTTAGTG 786 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1042 ACAGTGAAGGGAGAGAATTTGATAAATGGTCAGAGAACGAGAAGTCATCTTTGGTTAGTG 1101 Query 787 GACTTGGCTGGCAGTGAGCGAGTAGGAAAGGTAGAAGTTGAAGGAGAAAGGCTGAAAGAA 846 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1102 GACTTGGCTGGCAGTGAGCGAGTAGGAAAGGTAGAAGTTGAAGGAGAAAGGCTGAAAGAA 1161 Query 847 TCTCAATTTATCAATAAGTCGCTTTCGGCACTCGGTGATGTTATCTCTGCCCTTGCATCC 906 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1162 TCTCAATTTATCAATAAGTCGCTTTCAGCACTCGGTGATGTTATCTCTGCCCTTGCATCC 1221 Query 907 AAAACAAGCCACATTCCTTACAGAAACTCAAAGCTCACCCATATGCTGCAAAACTCTTTA 966 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1222 AAAACAAGCCACATTCCTTACAGAAACTCAAAGCTGACCCATATGCTGCAAAACTCTTTG 1281 Query 967 GGTGGAGATTGCAAGACATTAATGTTTGTCCAGATTAGTCCGAGTTCTGCCGATCTAGGA 1026 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1282 GGTGGAGATTGCAAGACATTAATGTTTGTCCAGATTAGTCCGAGTTCTGCCGATCTAGGA 1341 Query 1027 GAGACCCTTTGCTCCTTGAACTTTGCAAGTAGAGTCCGGGGAATCGAAAGTGGACCTGCC 1086 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1342 GAGACCCTTTGCTCCTTGAACTTTGCAAGTAGAGTCCGAGGAATCGAAAGTGGACCTGCC 1401 Query 1087 CGAAAACAGGCGGATGTGTCTGAACTCCTCAAGTCAAAACAAATGGCCGAGAAGCTGAAA 1146 ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 1402 CGAAAACAGGCTGATGTCTCTGAACTCCTTAAGTCAAAACAAATGGCCGAGAAGCTGAAA 1461 Query 1147 CACGAGGAAAAGGAAACAAAGAAGCTGCAGGACAATGTGCAGTCATTACAGCTACGCCTC 1206 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1462 CACGAGGAAAAGGAAACAAAGAAGCTGCAGGACAATGTGCAGTCACTACAGCTACGCCTC 1521 Query 1207 ACTGCTAGAGAACACATATGCAGAGGACTTCAAGATAAGGT 1247 ||||||||||||||||||||| ||||||||||||||||||| Sbjct 1522 ACTGCTAGAGAACACATATGCCGAGGACTTCAAGATAAGGT 1562 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62098074165 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5