BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489577 Length=906 Score E Sequences producing significant alignments: (Bits) Value AT5G27510.1 | Symbols: | Protein kinase superfamily protein | ... 1227 0.0 AT5G12090.1 | Symbols: | Protein kinase superfamily protein | ... 344 8e-94 AT2G41910.1 | Symbols: | Protein kinase superfamily protein | ... 56.5 4e-07 > AT5G27510.1 | Symbols: | Protein kinase superfamily protein | chr5:9713173-9714078 FORWARD LENGTH=906 Length=906 Score = 1227 bits (664), Expect = 0.0 Identities = 822/900 (91%), Gaps = 4/900 (0%) Strand=Plus/Plus Query 9 AAACGAAGAATACATCAAGTTTTTAGGTGAAGGTGCTTACAGTTTTGTTGATCTCTTCAA 68 ||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 9 AAACGAAGAATACGTCAAGTTTTTAGGTGAAGGTGCTTATAGTTTCGTTGATCTCTTCAA 68 Query 69 GTACACAAAAAGCGACGGCTCTTCGTTTCTCGCCGCCGTAAAAAGCTCCGATGAAGAAGA 128 |||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||| | Sbjct 69 GTACACAAAAAGCGACGGCTCTTCTTTTCACGCCGCCGTAAAAAGCTCCGATGATGAAAA 128 Query 129 CTCTCTCCTTACAGAGA-TTCGGATTCTTTCCGAACTCAGAGGATGTCCGAGAATCATAC 187 ||||||||||| ||| | ||| |||||||||||||||| ||||||||| |||||||||| Sbjct 129 CTCTCTCCTTAAAGA-ATTTCATATTCTTTCCGAACTCAAAGGATGTCCAAGAATCATAC 187 Query 188 AATACTTTGGTAACGATTTGGAAGAGGGTTTTGACTATAAGGGAAACAGAGTCTACAAGT 247 ||| |||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||| Sbjct 188 AATGCTTTGGTAACGACTTGGAAGAGGGTTTCGACGATAAAGGAAACAGAGTCTACAAGT 247 Query 248 TGCTTCTTGAGTACGCAACCGAAGGTAGTTTAAGCGATTTCATGAATAATTACACAGATA 307 ||||||| ||||||||| |||||||||||||||||||||||||||| |||| | |||| Sbjct 248 TGCTTCTCGAGTACGCATCCGAAGGTAGTTTAAGCGATTTCATGAACAATTGCGTGGATA 307 Query 308 GAAAATTACCAGACTTGATGATAAGAGACTTCACGCGTATGATTCTCGAAGGTTTGGTAT 367 |||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct 308 GAAAGTTACCAGACTTGATGATTAGAGACTTCACGCGTATGATTCTCCAAGGTTTGGTAT 367 Query 368 CAATTCATAGCCACGGTTATGTTCATTGTGATCTCAAGTCAGATAATCTCCTTGTCTTCA 427 | |||||||||||||||||||||||||| ||||||||| |||| ||| ||||||||||| Sbjct 368 CGATTCATAGCCACGGTTATGTTCATTGCGATCTCAAGCCAGAAAATGTCCTTGTCTTCC 427 Query 428 AGTGTAGAGATTCTTACGAATTGAAGATTTCTGATTTTGGAATCTCGTTAGAAGTCGGAG 487 ||| |||||||||||||| |||||||||||||||||||| |||| ||| ||||||||| Sbjct 428 CTTGTGGAGATTCTTACGAAGTGAAGATTTCTGATTTTGGACTCTCATTACAAGTCGGAG 487 Query 488 AAATTCCTGATCACTGGAAAATCGAATACCCTTTTGTTGGAACCCCTAATTACATGCCGC 547 || |||||||||||||||||||||||||||| ||||||||||| | ||| |||||||| | Sbjct 488 AAGTTCCTGATCACTGGAAAATCGAATACCCGTTTGTTGGAACGCTTAACTACATGCCTC 547 Query 548 CGGAGTCTCTTCAAGACGGTGTTGCCAAGAAAACCCTAGATTTGTGGTCATTAGGGTGTT 607 |||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 548 CGGAGTCTCTACATGACGGTGTTGCCAATAAAACCCTAGATTTGTGGTCATTAGGGTGTT 607 Query 608 TAGTGTTGGAGATGTATGTGGGTAAGAAGCCATGGCTAGGGTTTA-ATCCTGACGATTTT 666 |||||||||||||||||||| |||||||||||||| ||||||||| | ||||| |||||| Sbjct 608 TAGTGTTGGAGATGTATGTGTGTAAGAAGCCATGGATAGGGTTTATA-CCTGAGGATTTT 666 Query 667 GTGTCTATCCTCTCTAATGGTAATGCTCCAGAGATTCCCGAGAGTTTGCCTTGCGATGCA 726 |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 667 GTGTATATCCTCTCTAATGGTAACCCTCCAGAGATTCCCGAGAGTTTGCCTTGCGACGCA 726 Query 727 AGGGAGTTTATTCAAACGTGTTTCGCAAGGAACCCTAAGGAGAGAGGTACTGCCTCTGAG 786 |||| ||||||||||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct 727 AGGGCGTTTATTCAAAAGTGTTTCTCAAGGAACCCTAAGGAGAGAGGTACTGCGTCTGAG 786 Query 787 CTGCTGTCTCATCGGTTTTTGCGTCGAGGAAAATGGAAATCGAAGATGACTACTCCATTT 846 ||||||||||||||||||||||||| || ||||| ||||| |||||||| | ||||||| Sbjct 787 CTGCTGTCTCATCGGTTTTTGCGTCAAGAAAAATCGAAATTGAAGATGATTTCTCCATTC 846 Query 847 AACCGGCTTAAGTTTAATAAAATTTTAAATAAATTCTTGAGGTTGAAGAATTTCCTCTGA 906 |||| ||| |||||||| ||| ||||||| || |||||||||||||||||||||||||| Sbjct 847 AACCTGCTAAAGTTTAAGAAATTTTTAAACAAGCTCTTGAGGTTGAAGAATTTCCTCTGA 906 > AT5G12090.1 | Symbols: | Protein kinase superfamily protein | chr5:3909703-3910877 FORWARD LENGTH=1110 Length=1110 Score = 344 bits (186), Expect = 8e-94 Identities = 537/697 (77%), Gaps = 61/697 (9%) Strand=Plus/Plus Query 141 AGAGATTCGGATTCTTTCCGAACTC-AGAGGATGTCCGAGA-ATC-ATACAATACTTTGG 197 |||||| | |||||| || |||||| || |||| ||| | | ||| || | || ||| Sbjct 222 AGAGATACAGATTCTGTCTGAACTCAAG-GGATATCCCA-ACATCGTTA-TTTGCTATGG 278 Query 198 TA-ACGATTTGGAAGAGGGTTTTGACTATA-AGGGAAACAGAGTCTACAAGTTGCTTCTT 255 | ||||||||||||| | ||| || | | | ||| ||| ||| ||||| ||||||||| Sbjct 279 -AGACGATTTGGAAGAAGATTTCAACGA-ACACGGACACAAAGTTTACAAATTGCTTCTT 336 Query 256 GAGTACGCAACCGAAGGTAGTTTAAG--CGATTTCATGAATAATTA-CACAGATAGAAAA 312 || ||||||| |||||| |||||||| | | |||||| | ||||| | | || ||||| Sbjct 337 GAATACGCAAACGAAGGGAGTTTAAGTTC-A-TTCATGGAGAATTATC-CCGACAGAAAG 393 Query 313 TTACCAGACT-TGATGATAAGAGACTTCACGCGTATGATTCTCGAAGGTTTGGTATCAAT 371 |||||||| | |||||| |||||||||||||| |||||||||||||| ||||| ||||| Sbjct 394 TTACCAGA-TCCGATGATCAGAGACTTCACGCGGATGATTCTCGAAGGATTGGTCTCAAT 452 Query 372 TCATAGCCACGGTTATGTTCATTGTGATCTCAAGTCAGATAATCTCCTTGTCTTCAAGT- 430 ||||| ||||||||||||||||| |||||||| || ||||| || ||| ||||| | Sbjct 453 GCATAGTCACGGTTATGTTCATTGCGATCTCAAATCCGATAACCTTCTTATCTTC-TCTC 511 Query 431 GTAGAGA-T-T-C-T--TACGAATTGAAGATTTCTGATTTTGGAATCTCGTTAG--AAGT 482 | | ||| | | | | | ||| || ||||||| ||||||||||| || | ||| |||| Sbjct 512 GGAAAGATTCTGCTTCGTGCGAGTTAAAGATTTTTGATTTTGGAAACT-G-TAGACAAGT 569 Query 483 CGGAGAAATTCCTGATCACTGGAAAA-TCGAATACCCTTTTGTTGGAACCCCTAATTACA 541 ||||||| |||| ||||||||||||| | || ||||| | ||| ||||| ||| | | | Sbjct 570 CGGAGAAGTTCCGGATCACTGGAAAAGT-GATTACCCGTATGTGGGAACGCCTGAGT-C- 626 Query 542 TGCCGCCGGAGTCTCTTCAAGACGGTGTTGCCAAGAAAACCCTAGATTTGTGGTCATTAG 601 | | ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 627 T----------T-TCTTC--GACGGTGTTGCCAAGAAAACCCTAGATTTGTGGTCGTTAG 673 Query 602 GGTGTTTAGTGTTGGAGATGTATGTGGGTAAGAAGCCATGGCTAGG-GTTTAATCCTGAC 660 |||| ||||||||| |||| ||| ||| || |||||||| | | ||| | | || | Sbjct 674 GGTGCTTAGTGTTGAAGATTTATACAGGTGAGCAGCCATGGGAAAGAGTT-ACTAGTGTC 732 Query 661 GATTTTGTGTCTATCCTCTC-TAATGGT-AATGCTCCAGAGATTCCCGAGAGT-T-TGCC 716 ||||| ||| | | || | | ||||| || |||||| | ||||| || | | | |||| Sbjct 733 GATTTCGTGAATTTTCT-TAGTGATGGTGAA-GCTCCAAATATTCCTGA-A-TATGTGCC 788 Query 717 TTGCGATGCAAGGGAGTTTATTCAAACGTGTTTCGCAAGG-AACCCTAAGGAGAGAGGTA 775 ||| |||||||| ||||||||| ||||||||||||||||| ||| | || ||||||||| Sbjct 789 TTGTGATGCAAGAGAGTTTATTGAAACGTGTTTCGCAAGGGAACA-TGAGAAGAGAGGTA 847 Query 776 CTGCCTCTGAGCTGCTGTCT-CATCGGTTTTTGCGTC 811 | || |||||| || | | | |||| ||||||| ||| Sbjct 848 CCGCGTCTGAGTTGTTAT-TGCATCCGTTTTTGTGTC 883 > AT2G41910.1 | Symbols: | Protein kinase superfamily protein | chr2:17496956-17498077 FORWARD LENGTH=1122 Length=1122 Score = 56.5 bits (30), Expect = 4e-07 Identities = 30/30 (100%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 439 TCTTACGAATTGAAGATTTCTGATTTTGGA 468 |||||||||||||||||||||||||||||| Sbjct 469 TCTTACGAATTGAAGATTTCTGATTTTGGA 498 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44256283507 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5