BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489598 Length=1704 Score E Sequences producing significant alignments: (Bits) Value AT5G50300.1 | Symbols: AZG2, ATAZG2 | Xanthine/uracil permease ... 1029 0.0 > AT5G50300.1 | Symbols: AZG2, ATAZG2 | Xanthine/uracil permease family protein | chr5:20466068-20468124 REVERSE LENGTH=2057 Length=2057 Score = 1029 bits (557), Expect = 0.0 Identities = 877/1013 (87%), Gaps = 95/1013 (9%) Strand=Plus/Plus Query 781 CAA-ATCCAGTCAACGTTAGGAGCCATAAGCTTCACGGAGTTTAGAAAGAGCGAGGTTTG 839 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 985 CAAGATCCAGTCAACTTTAGGAGCCATAAGCTTCACGGAGTTTAGAAAGAGCGAGGTTTG 1044 Query 840 GGTCGCGTTCGCTACACTCTTTTACGTTGACCTCCTCGGCACGACTGGAGTACTCT--AC 897 ||||||||||||||||||||| ||||||||||| || || ||||| |||||||||| || Sbjct 1045 GGTCGCGTTCGCTACACTCTTCTACGTTGACCTTCTTGGTACGACCGGAGTACTCTACAC 1104 Query 898 -A---C---GAT----GG---C-T-G-AGATAGGAGGCTTCG-TGGA-AG-A--CGG-G- 933 | | ||| || | | | |||| ||| | || | ||| || | ||| | Sbjct 1105 AATGGCTGAGATCGGAGGATTCGTGGAAGATGGGAAG-TTTGAAGGAGAGTACGCGGCGT 1163 Query 934 A---A-TAGACGCCGGCTCCTCCGTGGTGGGATCGGCGCTAGG-GTTACAACGACGGCGA 988 | | |||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 1164 ACTTAGTAGACGCCGGCTCCTCCGTGGTGGGATCGGCGTTAGGTGTTACAACGACGGCGA 1223 Query 989 CTTTCGTGGAGTCTTCGGCGGGGTTGAAAGAAGGAGGGAAAACAGGGCTAACGGCCGTTA 1048 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1224 CTTTTGTGGAGTCTTCGGCGGGGTTGAAAGAAGGAGGGAAAACGGGGCTAACGGCCGTTA 1283 Query 1049 TAGTAGGAG-TGTATTTCTTGGCGTCGATGTTTTTGACGCCGTTAGTGACTAACGTGCCG 1107 | ||||| | |||||||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct 1284 TCGTAGG-GTTGTATTTCTTGGCGTCAATGTTTTTTACGCCGTTAGTTACTAACGTGCCG 1342 Query 1108 AGGTGGGCGGTCGGGCCGTCGCTGGTGATGGTTGGTGTGATGATGATGGGAGTTGTAAAA 1167 ||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1343 AGGTGGGCGGTTGGACCGTCGTTGGTGATGGTTGGTGTGATGATGATGGGAGTTGTAAAA 1402 Query 1168 GATATTAGATGGGGAGAGATTAAAGAAGCCGTGACGGCATTTGTAACGATCTTGCTTATG 1227 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| Sbjct 1403 GATATTAGATGGGGAGAGACTAAAGAAGCCGTGACAGCATTTGTAACGATCTTGCTTATG 1462 Query 1228 CCGTTGACTTATTCCATTGCTAATGGGATTATAGCTGGTATTGGTATATATCTTGC-TCT 1286 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | | Sbjct 1463 CCGTTGACTTATTCCATTGCTAATGGGATTATTGCTGGTATTGGTATATATCTTGCAT-T 1521 Query 1287 AAGCATGTACGATGTCGTTTTGGGAGTTGCAAAGTTGCTTAATGGGGTTAGGAAACGGGT 1346 ||||||||||||||||||||||||||||||||| | |||||| |||||||| |||||||| Sbjct 1522 AAGCATGTACGATGTCGTTTTGGGAGTTGCAAAATGGCTTAACGGGGTTAGAAAACGGGT 1581 Query 1347 TATGAGAGAGCATAATCAAGTTTCCTCCGTTGCTACCGTCTAGATCGTTTGATTATTGAC 1406 |||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| || Sbjct 1582 TATGAGAGAGCATAATCAAGTTTCTTCCGTCGCTACCGTCGAGATCGTTTGATTATTAAC 1641 Query 1407 GATAACCGATGTCATCAAACC-GGTTTTAGTGGTGTGTGAGTGT--ACCGTGAG-TGGTG 1462 |||||||||||||| |||| | |||||||||||||||||||||| |||| || ||||| Sbjct 1642 GATAACCGATGTCA-CAAAACTGGTTTTAGTGGTGTGTGAGTGTGTACCG-GAACTGGTG 1699 Query 1463 GAACTTTTCACATGGTCGGTCGTTGGATGACCAAAG-AAAGACCCGTCATGAATGCTCT- 1520 ||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct 1700 GAATTTTTCACATGGTCGGTCGTTGGATGACCAT-GCAAAGACCCGTCATGAATGCTCTC 1758 Query 1521 --T-TTATTTT--CT-T---------------GTTGTTTTGGTTTAGTTTGCGTAG---- 1555 | || |||| || | |||||||||||||||||||||||| Sbjct 1759 GGTGTTTTTTTTTCTCTTTCTTTTACTTTCTTGTTGTTTTGGTTTAGTTTGCGTAGGAGA 1818 Query 1556 ---TAGTGAAGTAACATTGGATGCATCAGCTGCCATGAACGTGTGTTTGATAATT-CATG 1611 |||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 1819 GAGTAGTGAAGTAACATTGGATGCATCAGCTGCCATGAACGTGTGTTTGATAATTTCTTG 1878 Query 1612 GCTGCTTGTGCATGCATTGTTT-------GT----TTC-A-------A-CTAAATGCTTC 1651 |||||||||||||||||||||| || ||| | | ||||||||||| Sbjct 1879 GCTGCTTGTGCATGCATTGTTTCTACTTTGTAGGGTTCTATTGTTTCAACTAAATGCTTC 1938 Query 1652 TTTTGTTTGTAGCATATATTTCAGTCAAAGACTTTTGAGTCCTTCAAAAATTG 1704 ||||||||||||||||||| ||| |||||||||| ||||||||||| |||||| Sbjct 1939 TTTTGTTTGTAGCATATATGTCAATCAAAGACTTCTGAGTCCTTCAGAAATTG 1991 Score = 636 bits (344), Expect = 0.0 Identities = 424/463 (92%), Gaps = 4/463 (1%) Strand=Plus/Plus Query 116 GCTGCAACCGCTACATTCCTCACCATGGCTTAT-TCATTACCGTCAACGCCAATATCTTA 174 ||||| ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct 176 GCTGCGACCGCCACATTCCTCACCATGGCTTATATCATTACCGTGAACGCCAATATCTTA 235 Query 175 GCCGACTCCGGCGCGACTTGCTCCTTCCACGACTGTTCCACCGTGTCCGGTTCTTCACCA 234 ||||||||||| || ||||||||| || ||||||||||||||||| || ||||||||||| Sbjct 236 GCCGACTCCGGTGCCACTTGCTCCATCAACGACTGTTCCACCGTGGCCAGTTCTTCACCA 295 Query 235 CCGGGTCCAGAATGCGTCCTTGGTTCTAACCCTGGCTACGAAGAATGTCTTGCTAGGGTT 294 || ||||||||||||||||| || |||||||||||||||||| ||||| || |||||||| Sbjct 296 CCCGGTCCAGAATGCGTCCTCGGGTCTAACCCTGGCTACGAACAATGTATTTCTAGGGTT 355 Query 295 AAAAAGGACCTCGTTGTGGCTA---CTTTATCAGCCATGGTTGGTTCATTAGCAATGGGT 351 |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct 356 AAAAAGGACCTCGTTGTGGCTACTTCTTTATCAGCCATGGTGGGTTCATTAGCAATGGGT 415 Query 352 TTGTTCGCTAATCTACCTTTTGGACTTGCTCCGGGTATGGGCGCCAACGCTCACATCGCA 411 ||||| |||||||| |||||||||||||||||||||||||| ||||||||| |||||||| Sbjct 416 TTGTTAGCTAATCTCCCTTTTGGACTTGCTCCGGGTATGGGAGCCAACGCTTACATCGCA 475 Query 412 TACAACGTTGTCGGGTTTCGTGGCTCCGGTTCAATCTCTTACCATACGGCTATGGCCATC 471 ||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| Sbjct 476 TACAACGTTGTCGGGTTTCGTGGATCCGGTTCTATCTCTTATCATACCGCTATGGCCATT 535 Query 472 GTGCTGCTTGAGGGATGCGCATTTCTCGCGGTGTCTGCTTTAGGACTCCGCGGGAAACTG 531 ||||| ||||| ||||| || |||||||| ||||| ||||||||||||||||||||||| Sbjct 536 GTGCTCCTTGAAGGATGTGCCTTTCTCGCTGTGTCGGCTTTAGGACTCCGCGGGAAACTT 595 Query 532 GCTTGTCTCATCCCTCAAACGGTGAGACTAGCCTGCACGGTCG 574 ||| ||||||||||||||||||||||||| |||||| |||||| Sbjct 596 GCTCGTCTCATCCCTCAAACGGTGAGACTGGCCTGCGCGGTCG 638 Score = 207 bits (112), Expect = 2e-52 Identities = 131/140 (94%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 575 ATGAACCAGGGCATTGGGCTCGTGGGACCGGAAAAGTCAACTCTAGTGACATTAACCG-C 633 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| | Sbjct 674 ATGAACCAGGGCATTGGCCTCGTGGGACCGGATAAGTCAACTCTAGTGACATTAACCGCC 733 Query 634 TGTGCAGAGACGGATTCTGTCACTGGAACTTGCTTGGGAGGGAAAATGAAGAGTCCTACG 693 || |||||||||||| ||||||||||| ||||||| ||||| |||||||||||||||||| Sbjct 734 TGCGCAGAGACGGATCCTGTCACTGGAGCTTGCTTAGGAGGTAAAATGAAGAGTCCTACG 793 Query 694 TTTTGGTTAGCCGTCGTCGG 713 |||||||||||||| ||||| Sbjct 794 TTTTGGTTAGCCGTTGTCGG 813 Score = 108 bits (58), Expect = 2e-22 Identities = 67/71 (94%), Gaps = 1/71 (1%) Strand=Plus/Plus Query 713 GAACGTCAAAAGGTAGTATGATTTACGGAATCGTGTTTGTTACGGCTGTTTCTTGGATTA 772 ||||||| ||||||||||||||||||||||||||||| || |||||| |||||||||||| Sbjct 844 GAACGTC-AAAGGTAGTATGATTTACGGAATCGTGTTCGTCACGGCTATTTCTTGGATTA 902 Query 773 GAGGCACTCAA 783 ||||||||||| Sbjct 903 GAGGCACTCAA 913 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84236514510 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5