BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489617
Length=834
Score E
Sequences producing significant alignments: (Bits) Value
AT5G27070.1 | Symbols: AGL53 | AGAMOUS-like 53 | chr5:9527741-9... 1048 0.0
AT5G26950.1 | Symbols: AGL93 | AGAMOUS-like 93 | chr5:9483251-9... 976 0.0
AT5G27580.1 | Symbols: AGL89 | AGAMOUS-like 89 | chr5:9736651-9... 915 0.0
AT5G27944.1 | Symbols: | MADS-box transcription factor family ... 830 0.0
AT5G27090.1 | Symbols: AGL54 | AGAMOUS-like 54 | chr5:9531845-9... 592 2e-168
AT5G26880.1 | Symbols: AGL26 | AGAMOUS-like 26 | chr5:9457037-9... 470 1e-131
AT5G27945.1 | Symbols: | Transducin/WD40 repeat-like superfami... 348 6e-95
> AT5G27070.1 | Symbols: AGL53 | AGAMOUS-like 53 | chr5:9527741-9528604
FORWARD LENGTH=864
Length=864
Score = 1048 bits (567), Expect = 0.0
Identities = 762/854 (89%), Gaps = 22/854 (3%)
Strand=Plus/Plus
Query 1 ATGTCGACGAAGAAGAAAACCAAACTGTCTCTGAGAAACCAAACTCGTTTCAAGAAATCA 60
|||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct 13 ATGTCGACGAAGAAGAAAACCAAATTGTCTGTGAGAAACCAAACTTGTTTCAAGAAATCG 72
Query 61 TCTCTG---TCTTCTTCTACTGCAAAAAAGACCACGAATTTGTCTATGAGAGAAGACACA 117
|| ||| ||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 73 TCCCTGTCTTCTTCTTCTACTGCAAAAAAGACCACGAATTTGTCTATGAGAGAACAGACC 132
Query 118 ATGTTTAAGAAAGCCTTCGAGCTTTCAACTCTGTGCGACATTGAAGTCTGTGTCATATAT 177
||||| ||||||||||| |||||||||||||||||| |||| || ||||||||||||||
Sbjct 133 ATGTTCAAGAAAGCCTTGGAGCTTTCAACTCTGTGCAACATCGATGTCTGTGTCATATAC 192
Query 178 TACGGTCGTGACGGAGAACTCATCAAGACATGGCCGGAAGATAAATCAAAGGTTCGAGAC 237
|| |||||||||||| |||||||||||||||||||||| ||| ||||||| |||||||||
Sbjct 193 TATGGTCGTGACGGAAAACTCATCAAGACATGGCCGGAGGATCAATCAAAAGTTCGAGAC 252
Query 238 ATGGCTGAGAGATTTACCAAACTAAACGATAGAGAGAGACGCAAGAAAAGCACAAACCTT 297
||||||||||| |||| || | || |||| |||||| || |||||||||| || ||||||
Sbjct 253 ATGGCTGAGAGGTTTAGCAGATTACACGAGAGAGAGCGATGCAAGAAAAGAACCAACCTT 312
Query 298 TCTCTGTTGCTAAGGAAGAAGATCCTCGACGACGA-TAAGCTCTCGGAGAAAGTTTTAGA 356
|||||||| ||| | |||||||||||||||||| | ||| | ||||||||||| |||||
Sbjct 313 TCTCTGTTTCTACGTAAGAAGATCCTCGACGAC-ACTAAATTGTCGGAGAAAGTCTTAGA 371
Query 357 GATGAAGGATTCGTTAGAAAGTGGTCTACGGGTATTACAAGATAAGCTTCTGTTACTCCA 416
|||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 372 GATGGAGGATTCGTTAGAAAGTGGTCTACGAGTACTACAAGATAAGCTTCTGTTACTCCA 431
Query 417 ACCCGA-AAA--CCAGACCGAGTTAGGTCAGAGCCGTGTGGTTTCTTCCACAACGAATCC 473
|||||| ||| |||||||||||| ||||||| ||||| |||||||||||||||||||||
Sbjct 432 ACCCGAGAAAAACCAGACCGAGTTTGGTCAGACCCGTGCGGTTTCTTCCACAACGAATCC 491
Query 474 ATTGTCT--TC-TCCT--G--A---G-G-ATCATCATCAACAACAATGGACAGAATCACT 521
||||||| || |||| | | | | |||||| ||| ||||||||||||||| || |
Sbjct 492 ATTGTCTCCTCCTCCTTCGCTAATTGAGGATCATCGTCATCAACAATGGACAGAACCATT 551
Query 522 GGTGAATGGTGTGTCAAACACAGAGCAAGACCTATCGATGTCATCATTGAGTCAACATCA 581
| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 552 GATGAGTGGTGTGTCAAACACAGAGCAAGACCTATCGACGTCATCATTGAGTCAAAATCA 611
Query 582 GAGCA-AATTTTCAATCTTTCTCTATAACCATGACAATGGTAGCTTCTGTCAACTCCCTG 640
||||| ||||| || |||||||||||||||||||||| ||||||||| |||| ||||||
Sbjct 612 GAGCAGAATTT-CAGTCTTTCTCTATAACCATGACAACCGTAGCTTCTATCAAGTCCCTG 670
Query 641 ACTCTGTTTCTAGCTTTGACCAATCGGCTTTACTTGGGGCACAAGGATCAGATCTAAGAA 700
|||| |||||||||||||||||||||||||||||||||| ||||||||| | |||| |||
Sbjct 671 ACTCAGTTTCTAGCTTTGACCAATCGGCTTTACTTGGGGAACAAGGATCTGGTCTAGGAA 730
Query 701 GTAACTTTGATCATCTTCCTATGGTGTTTCCTCCTCAGATGCAGACACAAACCCCACTTG 760
|||||||||||| || ||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 731 GTAACTTTGATCTTCCTCCCATGGTTTTTCCTCCTCAGATGCAGACACAAACCCCACTTG 790
Query 761 TCCACTTTGATCAGTTTGCGCCATGGAATCAAGCACCATCTTTTACAGATCCAATGATGT 820
||| |||||||||||||||| |||||||||||||||| || ||| |||||||||||||||
Sbjct 791 TCCCCTTTGATCAGTTTGCGGCATGGAATCAAGCACCGTCGTTTGCAGATCCAATGATGT 850
Query 821 TCTCTTATAATTAG 834
|| |||||||||||
Sbjct 851 TCCCTTATAATTAG 864
> AT5G26950.1 | Symbols: AGL93 | AGAMOUS-like 93 | chr5:9483251-9484120
REVERSE LENGTH=870
Length=870
Score = 976 bits (528), Expect = 0.0
Identities = 758/864 (88%), Gaps = 36/864 (4%)
Strand=Plus/Plus
Query 1 ATGTCGACGAAGAAGAAAACCAAACTGTCTCTGAGAAACCAAACTCGTTTCAAGAAATCA 60
|||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct 13 ATGTCGACGAAGAAGAAAACCAAATTGTCTGTGAGAAACCAAACTTGTTTCAAGAAATCG 72
Query 61 TCTCTGTCTTCTTC-T--ACTGCAAAAAAGACCACGAATTTGTCTATGAGAGAAGACACA 117
|| ||||||||||| | |||||||||||||||||||||||||||||||||||| | ||
Sbjct 73 TCCCTGTCTTCTTCTTCCACTGCAAAAAAGACCACGAATTTGTCTATGAGAGAACAGACC 132
Query 118 ATGTTTAAGAAAGCCTTCGAGCTTTCAACTCTGTGCGACATTGAAGTCTGTGTCATATAT 177
||||||||||||||| |||||||||| ||||||||| |||| || ||||||||||||||
Sbjct 133 ATGTTTAAGAAAGCCCTCGAGCTTTCGACTCTGTGCAACATCGATGTCTGTGTCATATAC 192
Query 178 TACGGTCGTGACGGAGAACTCATCAAGACATGGCCGGAAGATAAATCAAAGGTTCGAGAC 237
|| |||||||||||| |||||||||||||||||||||| ||| ||||||| |||||||||
Sbjct 193 TATGGTCGTGACGGAAAACTCATCAAGACATGGCCGGATGATCAATCAAAAGTTCGAGAC 252
Query 238 ATGGCTGAGAGATTTACCAAACTAAACGATAGAGAGAGACGCAAGAAAAGCACAAACCTT 297
||||||||||| |||| || | || |||| |||||| || |||||||||| || ||||||
Sbjct 253 ATGGCTGAGAGGTTTAGCAGATTACACGAGAGAGAGCGATGCAAGAAAAGAACCAACCTT 312
Query 298 TCTCTGTTGCTAAGGAAGAAGATCCTCGACGACGA-TAAGCTCTCGGAGAAAGTTTTAGA 356
|||||||| ||| | |||||||||||||||||| | ||| | ||||||||||| |||||
Sbjct 313 TCTCTGTTTCTACGTAAGAAGATCCTCGACGAC-ACTAAATTGTCGGAGAAAGTCTTAGA 371
Query 357 GATGAAGGATTCGTTAGAAAGTGGTCTACGGGTATTACAAGATAAGCTTCTGTTACTCCA 416
|||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 372 GATGGAGGATTCGTTAGAAAGTGGTCTACGAGTACTACAAGATAAGCTTCTGTTACTCCA 431
Query 417 ACCCGA-AAA--CCAGACCGAGTTAGGTCAGAGCCGTGTGGTTTCTTCCACAACGAATCC 473
|||||| ||| |||||||||||| ||||||| ||||| |||||||||||||||||||||
Sbjct 432 ACCCGAGAAAAACCAGACCGAGTTTGGTCAGACCCGTGCGGTTTCTTCCACAACGAATCC 491
Query 474 ATTGTCT--TC-TCCT--G--A---G-G-ATCATCATCAACAACAATGGACAGAATCACT 521
||||||| || |||| | | | | |||||| ||| |||||| |||||||| || |
Sbjct 492 ATTGTCTCCTCCTCCTTCGCTAATTGAGGATCATCGTCATCAACAACGGACAGAACCATT 551
Query 522 GGTGAATGGTGTGTCAAACACAGAGCAAGACCTATCGATGTCATCATTGAGTCAACATCA 581
| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 552 GATGAGTGGTGTGTCAAACACAGAGCAAGACCTATCGACGTCATCATTGAGTCAAAATCA 611
Query 582 GAGCAAATTTTCAATCTTTCTCTATAACCATGACAA-TGGTAGCTTCTGTCAACTCCCTG 640
|||||||||||| |||||||||||||||||||||| || |||||||| |||| | ||||
Sbjct 612 GAGCAAATTTTCTGTCTTTCTCTATAACCATGACAACTG-TAGCTTCTATCAAGTACCTG 670
Query 641 ACTCTGTTTCTAGCTTTGACCAAT----CG-G--CT--TT-ACTTGGGGCACAAGGATCA 690
|||||||||||||||||||| | | || | || || |||||||| |||||||||
Sbjct 671 ACTCTGTTTCTAGCTTTGAC-AGTTTGACGAGTACTGGTTTACTTGGGGAACAAGGATCT 729
Query 691 GATCTAAGAAGTAACTTTGATCATCTTCCTATGGTGTTTCCTCCTCAGATGCAGACACAA 750
| ||| |||||| |||||||| || || ||||| ||||||||||||||||||||||||
Sbjct 730 GGTCTGGGAAGTAGCTTTGATCTTC--CC-ATGGTTTTTCCTCCTCAGATGCAGACACAA 786
Query 751 ACCCCACTTGTCCACTTTGATCAGTTTGCGCCATGGAATCAAGCACCATCTTTTACAGAT 810
||||||||||||| ||||||||||||||||||||||||||||||||| || ||| |||||
Sbjct 787 ACCCCACTTGTCCCCTTTGATCAGTTTGCGCCATGGAATCAAGCACCGTCGTTTGCAGAT 846
Query 811 CCAATGATGTTCTCTTATAATTAG 834
|||||||||||| |||||||||||
Sbjct 847 CCAATGATGTTCCCTTATAATTAG 870
> AT5G27580.1 | Symbols: AGL89 | AGAMOUS-like 89 | chr5:9736651-9737322
FORWARD LENGTH=672
Length=672
Score = 915 bits (495), Expect = 0.0
Identities = 598/648 (92%), Gaps = 5/648 (1%)
Strand=Plus/Plus
Query 1 ATGTCGACGAAGAAGAAAACCAAACTGTCTCTGAGAAACCAAACTCGTTTCAAGAAATCA 60
|||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct 13 ATGTCGACGAAGAAGAAAACCAAATTGTCTGTGAGAAACCAAACTTGTTTCAAGAAATCG 72
Query 61 TCTC--T-GTCTTCTTCTACTGCAAAAAAGACCACGAATTTGTCTATGAGAGAAGACACA 117
|||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 73 TCTCTTTCTTCTTCTTCTACTGCAAAAAAGACCACGAATTTGTCTATGAGAGAAGAGACC 132
Query 118 ATGTTTAAGAAAGCCTTCGAGCTTTCAACTCTGTGCGACATTGAAGTCTGTGTCATATAT 177
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 133 ATGTTTAAGAAAGCCTTGGAGCTTTCAACTCTGTGCGACATCGAAGTCTGTGTCATATAT 192
Query 178 TACGGTCGTGACGGAGAACTCATCAAGACATGGCCGGAAGATAAATCAAAGGTTCGAGAC 237
|| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 193 TATGGTCGTGACGGAGAACTCATCAAGACATGGCCGGAAGATCAATCCAAGGTTCGAGAC 252
Query 238 ATGGCTGAGAGATTTACCAAACTAAACGATAGAGAGAGACGCAAGAAAAGCACAAACCTT 297
||||||||||| |||| ||||||| |||| |||||| ||||||||||||| |||||||||
Sbjct 253 ATGGCTGAGAGGTTTAGCAAACTACACGAGAGAGAGCGACGCAAGAAAAGAACAAACCTT 312
Query 298 TCTCTGTTGCTAAGGAAGAAGATCCTCGACGACGATAAGCTCTCGGAGAAAGTTTTAGAG 357
|||||||| ||| | || ||||||||||||||| |||| | ||||||||||| ||||||
Sbjct 313 TCTCTGTTTCTACGTAAAAAGATCCTCGACGACAATAAATTGTCGGAGAAAGTCTTAGAG 372
Query 358 ATGAAGGATTCGTTAGAAAGTGGTCTACGGGTATTACAAGATAAGCTTCTGTTACTCCAA 417
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 373 ATGAAGGATTCGCTAGAAAGTGGTCTACGGGTATTACAAGATAAGCTTCTGTTACTCCAA 432
Query 418 CCCGAAAACCAGACCGAGTTAGGTCAGAGCCGTGTGGTTTCTTCCACAACGAATCCATTG 477
||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct 433 CCCGAGAACCAGACCGAGCTAGGTCAGAGCCGTGCGGTTTCTTCCACAACGAATCCATTG 492
Query 478 TCTTCTCCTGAGGATCATCATCAACAACAATGGACAGAATCACTGGTGAATGGTGTGTCA 537
||||||||||||||||||||||| ||||||||||||||| || |||||| ||||||||||
Sbjct 493 TCTTCTCCTGAGGATCATCATCATCAACAATGGACAGAACCATTGGTGACTGGTGTGTCA 552
Query 538 AACACAGAGCAAGACCTATCGATGTCATCATTGAGTCAAC-ATCAGAGCAAATTTTCAAT 596
|||||||||||||||||||||| |||| |||||||| ||| |||||||||||| |||| |
Sbjct 553 AACACAGAGCAAGACCTATCGACGTCACCATTGAGT-AACCATCAGAGCAAATATTCAGT 611
Query 597 CTTTCTCTATAACCATGACAATGGTAGCTTCTGTCAACTCCCTGACTC 644
|||| ||||||||||||||| || ||||||| |||| ||||||||||
Sbjct 612 CTTTGTCTATAACCATGACAGCGGAAGCTTCTATCAAGTCCCTGACTC 659
> AT5G27944.1 | Symbols: | MADS-box transcription factor family
protein | chr5:9975918-9976592 REVERSE LENGTH=675
Length=675
Score = 830 bits (449), Expect = 0.0
Identities = 587/653 (90%), Gaps = 12/653 (2%)
Strand=Plus/Plus
Query 1 ATGTCGACGAAGAAGAAAACCAAACTGTCTCTGAGAAACCAAACTCGTTTCAAGAAATCA 60
|||||||||||||||||||||||| ||||| |||||||||||||| | |||||||||||
Sbjct 13 ATGTCGACGAAGAAGAAAACCAAATTGTCTGTGAGAAACCAAACTTGCTTCAAGAAATCG 72
Query 61 TCTCTGTCTTCTTC-T--ACTGCAAAAAAGACCACGAATTTGTCTATGAGAGAAGACACA 117
|||||||||||||| | |||||||||||||||||||||||||||||||||||| | ||
Sbjct 73 TCTCTGTCTTCTTCTTCCACTGCAAAAAAGACCACGAATTTGTCTATGAGAGAACAGACC 132
Query 118 ATGTTTAAGAAAGCCTTCGAGCTTTCAACTCTGTGCGACATTGAAGTCTGTGTCATA-TA 176
||||||||||||||||| |||||||| ||||| |||||||| ||||||||||||||| |
Sbjct 133 ATGTTTAAGAAAGCCTTGGAGCTTTCGACTCTCTGCGACATCGAAGTCTGTGTCATACT- 191
Query 177 TTACGGTCGTGACGGAGAACTCATCAAGACATGGCCGGAAGATAAATCAAAGGTTCGAGA 236
||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 192 TTATGGTCGTGACGGAGAACTCATCAAGACATGGCCGGAAGATCAATCAAAAGTTCGAGA 251
Query 237 CATGGCTGAGAGATTTACCAAACTAAACGATAGAGAGAGACGCAAGAAAAGCACAAACCT 296
|||||||||||| |||| || | || |||| |||||| || |||||||||| ||||||||
Sbjct 252 CATGGCTGAGAGGTTTAGCAGATTACACGAGAGAGAGCGATGCAAGAAAAGGACAAACCT 311
Query 297 TTCTCTGTTGCTAAGGAAGAAGATCCTCGACGACGATAAGCTCTCGGAGAAAGTTTTAGA 356
||||||||| ||| | |||||||||||||||||| |||| | || |||||||| |||||
Sbjct 312 TTCTCTGTTTCTACGTAAGAAGATCCTCGACGACAATAAATTGTCTGAGAAAGTCTTAGA 371
Query 357 GATGAAGGATTCGTTAGAAAGTGGTCTACGGGTATTACAAGATAAGCTTCTGTTACTCCA 416
|||| ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||
Sbjct 372 GATGGAGGATTCGTTAGAAAGTGGTCTACGGGTACTGCAAAATAAGCTTCTGTTACTCCA 431
Query 417 ACCCGA-AAA--CCAGACCGAGTTAGGTCAGAGCCGTGTGGTTTCTTCCACAACGAATCC 473
|||||| ||| ||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 432 ACCCGAGAAAAACCAGACCAAGTTAGGTCAGAGCCGTGCGGTTTCTTCCACAACGAATCT 491
Query 474 ATTGTCTTCTCCTGAGGATCATCATCAA-CAACAATGGACAGAATCACTGGTGAATGGTG 532
|||||||||||||||| |||| ||| || ||||||||||||||| || ||| ||||||||
Sbjct 492 ATTGTCTTCTCCTGAGAATCACCAT-AATCAACAATGGACAGAACCATTGGAGAATGGTG 550
Query 533 TGTCAAACACAGAGCAAGACCTATCGA-TGTCATCATTGAGTCAACATCAGAGCAAATTT 591
||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||| |
Sbjct 551 TGTCAAACACAGAGCAAGAGCTATCGACT-TCATCATTGAGTCAACATCAGAGCAAATAT 609
Query 592 TCAATCTTTCTCTATAACCATGACAATGGTAGCTTCTGTCAACTCCCTGACTC 644
|| ||||||| |||||||||||||| || ||||||| |||| ||||||||||
Sbjct 610 TCTGTCTTTCTTTATAACCATGACAACGGAAGCTTCTATCAAGTCCCTGACTC 662
> AT5G27090.1 | Symbols: AGL54 | AGAMOUS-like 54 | chr5:9531845-9532408
FORWARD LENGTH=564
Length=564
Score = 592 bits (320), Expect = 2e-168
Identities = 433/488 (89%), Gaps = 5/488 (1%)
Strand=Plus/Plus
Query 3 GTCGACGAAGAAGAAAACCAAACTGTCTCTGAGAAACCAAACTCGTTTCAAGAAATCATC 62
||| ||||||||||| |||||| ||| | | |||||||||||| ||||||||||||| ||
Sbjct 15 GTCTACGAAGAAGAATACCAAATTGTTTGTAAGAAACCAAACTTGTTTCAAGAAATCGTC 74
Query 63 TCTGTCTTCTTCTACTGCAAAAAAGACCACGAATTTGTCTATGAGAGAAGACACAATGTT 122
|||||||||||| | |||||||||||||||||||||||| ||||||||| | || |||||
Sbjct 75 TCTGTCTTCTTCCAATGCAAAAAAGACCACGAATTTGTCGATGAGAGAACAGACCATGTT 134
Query 123 TAAGAAAGCCTTCGAGCTTTCAACTCTGTGCGACATTGAAGTCTGTGTCATATATTACGG 182
|||||||||||| |||||||| |||||||||||||| ||||||||||||||||| || ||
Sbjct 135 TAAGAAAGCCTTGGAGCTTTCGACTCTGTGCGACATCGAAGTCTGTGTCATATACTATGG 194
Query 183 TCGTGACGGAGAACTCATCAAGACATGGCCGGAAGATAAATCAAAGGTTCGAGACATGGC 242
|||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct 195 TCGTGACGGAAAACTCATCAAGACATGGCCGGAAGATCAATCTAAGGTTCGAGACATGGC 254
Query 243 TGAGAGATTTACCAAACTAAACGATAGAGAGA-GACGCAAGAAAAGCACAAACCTTTCTC 301
||||| |||| || | || |||| ||||| | || |||| ||||| || ||||||||||
Sbjct 255 AGAGAGGTTTAGCAGATTACACGAGAGAGA-ACGATGCAAAAAAAGAACCAACCTTTCTC 313
Query 302 TGTTGCTAAGGAAGAAGATCCTCGACGACGATAAGCTCTCGGAGAAAGTTTTAGAGATGA 361
|||| ||| | ||| |||||||| ||||| | || | ||||||||||| |||||||||
Sbjct 314 TGTTTCTACGTAAGCAGATCCTCCACGACAAGAAATTGTCGGAGAAAGTCTTAGAGATGG 373
Query 362 AGGATTCGTTAGAAAGTGGTCTACGGGTATTACAAGATAAGCTTCTGTTACTCCAACCCG 421
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 374 AGGATTCGTTAGAAAGTGGTCTACGGGTACTACAAGATAAGCTTCTGTTACTCCAACCCG 433
Query 422 A-AAA--CCAGACCGAGTTAGGTCAGAGCCGTGTGGTTTCTTCCACAACGAATCCATTGT 478
| ||| |||||||||||||||||||||| ||| ||||| |||||||||| |||||||||
Sbjct 434 AGAAAAACCAGACCGAGTTAGGTCAGAGCTGTGCGGTTTATTCCACAACGTATCCATTGT 493
Query 479 CTTCTCCT 486
||||||||
Sbjct 494 CTTCTCCT 501
> AT5G26880.1 | Symbols: AGL26 | AGAMOUS-like 26 | chr5:9457037-9459230
REVERSE LENGTH=1411
Length=1411
Score = 470 bits (254), Expect = 1e-131
Identities = 322/354 (91%), Gaps = 7/354 (2%)
Strand=Plus/Plus
Query 97 TTGTCTATGAGAGAAGACACAATGTTTAAGAAAGCCTTCGAGCTTTCAACTCTGTGCGAC 156
||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct 761 TTGTCTATGAGAGAAGATACAATGTTTAAGAAAGCCCTCGAGCTTTCAACTCTGTGCGAT 820
Query 157 ATTGAAGTCTGTGTCATA-TATTACGGTCGTGACGGAGAACTCATCAAGACATGGCCGGA 215
|| ||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||
Sbjct 821 ATCGAAGTCTGTGTCATACT-TTATAGTCGTGACGGAGAACTCATCAAGACATGGCCGGA 879
Query 216 AGATAAATCAAAGGTTCGAGACATGGCTGAGAGATTTACCAAACTAAACGATAGAGAGAG 275
||| |||| ||||||||||||||||| ||||| |||| ||||||| |||| |||||| |
Sbjct 880 GGATCAATCCAAGGTTCGAGACATGGCAGAGAGGTTTAGCAAACTACACGAGAGAGAGCG 939
Query 276 ACGCAAGAAAAGCACAAACCTTTCTCTGTTGCTAAGGAAGAAGATCCTCGACGAC-GATA 334
|||||||||||| || |||||||||||||| ||| | ||||||||||||||| || | ||
Sbjct 940 ACGCAAGAAAAGAACCAACCTTTCTCTGTTTCTACGTAAGAAGATCCTCGACAACAG-TA 998
Query 335 AGCTCTCGGAGAAAGTTTTAGAGATGAAGGATTCGTTAGAAAGTGGTCTACGGGTATTAC 394
|||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 999 AGCTCTCGGAGAAAGTCTTAGAGATGAAGGATTCATTAGAAAGTGGTCTACGGGTACTAC 1058
Query 395 AAGATAAGCTTCTGTTACTCCAACCCGA-AAA--CCAGACCGAGTTAGGTCAGA 445
||||||||||||||||||| |||||||| ||| ||||||||||||||||||||
Sbjct 1059 AAGATAAGCTTCTGTTACTACAACCCGAGAAAAACCAGACCGAGTTAGGTCAGA 1112
Score = 207 bits (112), Expect = 1e-52
Identities = 147/163 (90%), Gaps = 6/163 (4%)
Strand=Plus/Plus
Query 498 TCAACAACAATGGACAGAATCACTGGTG-A-AT-GGTGTGTCAAACACAGAGCAAGACCT 554
||| ||||||||||||||| || ||||| | || ||||||||||||||||||||||||||
Sbjct 1119 TCATCAACAATGGACAGAACCATTGGTGAATATCGGTGTGTCAAACACAGAGCAAGACCT 1178
Query 555 ATCGATGTCATCATTGAGTCAACATCAGAGCAAATTTTCAATCTTTCTCTATAACCATGA 614
||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1179 ATCGACGTCACCATTGAGTCAACATCAGAGCAAATTTTCAGTCTTTCTCTATAACCATGA 1238
Query 615 CAA-TGGTAGCTTCTGTCAACTCCCTGACTCTGTTTCTAGCTT 656
||| || |||||||| |||| ||| || ||||||||||| |||
Sbjct 1239 CAACTG-TAGCTTCTATCAAGTCCGTGCCTCTGTTTCTA-CTT 1279
> AT5G27945.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:9976007-9977601 FORWARD LENGTH=1287
Length=1287
Score = 348 bits (188), Expect = 6e-95
Identities = 250/279 (90%), Gaps = 7/279 (3%)
Strand=Plus/Minus
Query 295 CTTTCTCTGTTGCTAAGGAAGAAGATCCTCGACGACGATAAGCTCTCGGAGAAAGTTTTA 354
||||||||||| ||| | |||||||||||||||||| |||| | || |||||||| |||
Sbjct 277 CTTTCTCTGTTTCTACGTAAGAAGATCCTCGACGACAATAAATTGTCTGAGAAAGTCTTA 218
Query 355 GAGATGAAGGATTCGTTAGAAAGTGGTCTACGGGTATTACAAGATAAGCTTCTGTTACTC 414
|||||| ||||||||||||||||||||||||||||| | ||| |||||||||||||||||
Sbjct 217 GAGATGGAGGATTCGTTAGAAAGTGGTCTACGGGTACTGCAAAATAAGCTTCTGTTACTC 158
Query 415 CAACCCGA-AAA--CCAGACCGAGTTAGGTCAGAGCCGTGTGGTTTCTTCCACAACGAAT 471
|||||||| ||| ||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct 157 CAACCCGAGAAAAACCAGACCAAGTTAGGTCAGAGCCGTGCGGTTTCTTCCACAACGAAT 98
Query 472 CCATTGTCTTCTCCTGAGGATCATCATCAA-CAACAATGGACAGAATCACTGGTGAATGG 530
| |||||||||||||||| |||| ||| || ||||||||||||||| || ||| ||||||
Sbjct 97 CTATTGTCTTCTCCTGAGAATCACCAT-AATCAACAATGGACAGAACCATTGGAGAATGG 39
Query 531 TGTGTCAAACACAGAGCAAGACCTATCGA-TGTCATCAT 568
||||||||||||||||||||| ||||||| | |||||||
Sbjct 38 TGTGTCAAACACAGAGCAAGAGCTATCGACT-TCATCAT 1
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 40639424923
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5