BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489622 Length=710 Score E Sequences producing significant alignments: (Bits) Value AT5G27980.1 | Symbols: | Seed maturation protein | chr5:100157... 1107 0.0 > AT5G27980.1 | Symbols: | Seed maturation protein | chr5:10015774-10016726 REVERSE LENGTH=738 Length=738 Score = 1107 bits (599), Expect = 0.0 Identities = 675/712 (95%), Gaps = 4/712 (1%) Strand=Plus/Plus Query 1 AAAGAGAGAAAAATTTA-CCCAAAAATATGAGCGAAGAACAGCTGCAGAAACCTATAGAT 59 ||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 25 AAAGAGAGAAAGAGTTACCCCAAAAA-ATGAGCGAAGAACAGCTGCAGAAACCTATAGAT 83 Query 60 TGTGTTGATGTAAAAGGAGAGGCAGAGAAGATTTCGACAACGGAGGGAAGCATTAAGGCA 119 |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 84 TGTGCTGATGTAAAAGGAGAGGCAGAGAAGATTTCGACAACGGAGGGAGGCATTAAGGCG 143 Query 120 GCGGAGGACAAAGAGAAAGGTGTTGTAGCCGAGGCCTCCGGTGAACAGGCCGAGGGAGAA 179 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 144 GCGGAGGACAAAGAGAAAGGTGTTGTAGCCGAGGCCTCCGGTGAACAGGCGGAGGGAGAA 203 Query 180 GTTAACCAGAAAAAGGTGGTAGCTAATCCTCTGAAATCAGAAGGAACCATAACAATTGGA 239 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 204 GTTAACCAGAAAAAGGTGGTAGCTAATCCTCTGAAATCGGAAGGAACCATAACAATTGGA 263 Query 240 GAGGCTCTAGAGGCAGCGGTTCTCACGGCAGGGAATAAGCCGGTGGAGTGGAGTGATGCA 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 264 GAGGCTCTAGAGGCAGCGGTTCTCACGGCAGGGAATAAGCCGGTGGAGTGGAGTGACGCA 323 Query 300 GCCGCCATTCAAGCGGCCGAGGTTAGAGCCACGGGGCGGACCAACATCATGCCCGGTGGT 359 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| Sbjct 324 GCCGCCATTCAAGCGGCCGAGGTTAGAGCTACGGGGCGGACCAATATCATGCCCGGCGGT 383 Query 360 GTTGCGGCTTCAGCTCAATCAGCCGCCACTCTTAATGCTCGTGTCGGCTCTGACGATACC 419 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 384 GTTGCGGCTTCAGCTCAATCAGCCGCCACTCTTAATGCTCGTATCGGCTCTGACGATACC 443 Query 420 AAGACTACGCTAGCCGACGTTCTCACTGGAGCGAGTAGCAAATTACCGTCGGACAAAGCA 479 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 444 AAGACTACGCTAGCCGACGTTCTCACTGGAGCGAGTAGCAAATTACCATCGGATAAAGCA 503 Query 480 GCAACGAGAAAAGACGCTGAGGGAGTGACAGGCGCAGAGATGAGAAACGATCCTCATCTC 539 ||||||||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||| Sbjct 504 GCAACGAGAAAGGACGCAGAGGGAGTGACTGGCGCCGAGATGAGGAACGATCCTCATCTC 563 Query 540 ACTACTTACCCAACCGGCGTGGCCGCCTCTGTTGCTGCCGCCGCTCGGATCAATCAGTC- 598 ||||| ||||||||||| ||||| |||||||| |||||||||||||||||||||||||| Sbjct 564 ACTACATACCCAACCGGTGTGGCTGCCTCTGTCGCTGCCGCCGCTCGGATCAATCAGTCC 623 Query 599 AAAGTAATACAATTCTTCATTATTGGTATTGAGAAGCAAGTTTATATAAACTTAATTAAA 658 ||| | || ||||||||| || ||| ||||||||||||||||||||||||||||| ||| Sbjct 624 AAA-TGATGCAATTCTTCTTTCTTGTTATTGAGAAGCAAGTTTATATAAACTTAAACAAA 682 Query 659 TGTATATATGTTGATGTATATAAGATTTTCAAGTTTTTACTTTTACCTAATT 710 ||||||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct 683 TGTATATATGTTGATCTATATAAGATTCTCAAGTTTTTAATTTTACCTAATT 734 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34410390695 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5