BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489669
Length=1947
Score E
Sequences producing significant alignments: (Bits) Value
AT5G28900.1 | Symbols: | Calcium-binding EF-hand family protei... 2920 0.0
AT5G28850.2 | Symbols: | Calcium-binding EF-hand family protei... 2665 0.0
AT1G54450.1 | Symbols: | Calcium-binding EF-hand family protei... 809 0.0
> AT5G28900.1 | Symbols: | Calcium-binding EF-hand family protein
| chr5:10925635-10930338 FORWARD LENGTH=2139
Length=2139
Score = 2920 bits (1581), Expect = 0.0
Identities = 1834/1951 (94%), Gaps = 37/1951 (2%)
Strand=Plus/Plus
Query 28 TCTCGACTTTG-TTC--TTGATTGAATATGGTTGG-TTCGATTGTTCCCGGAGACATGGC 83
||||||||||| | | |||||| ||||||| ||| | || || |||||||||| |||||
Sbjct 191 TCTCGACTTTGATGCGATTGATTAAATATGG-TGGATACGGTTATTCCCGGAGATATGGC 249
Query 84 TTGTTTGGATGTAGATTTGTTGCAGCTTCAAGAAATGTCATCCTTTGTTCTGAATTCGAA 143
||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||
Sbjct 250 TTGTTTGGATGCAGATTTGTTGCAGCTTCAGGAAATGTCTTCCTTTGTTCTCAATTCTAA 309
Query 144 ACCTGGATTCACTCAAAAGCTCTTCGACCAGTGGCTTTCTCTTCCCGAATCCCATCGACA 203
||||||||||||||| ||||||||||||||||||||||||||||||||| | || |||||
Sbjct 310 ACCTGGATTCACTCAGAAGCTCTTCGACCAGTGGCTTTCTCTTCCCGAAGCTCAGCGACA 369
Query 204 GATTGGATCATTGCTTAAGGATGCTATAGCTGGAGCTCCTATAAATGTTACTGGAAGTGC 263
| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 370 GGTTGGATCATTGCTTAAGGATGCTGTAGCTGGAGCTCCTATCAATGTTACTGGAAGTGC 429
Query 264 ATCGGGTTCAAATTCTGCTACTATACCATCTATGTTTCCTGCGGGAAGTGCTCCTCCGCT 323
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 430 ATCGGGTTCTAATTCTGCCACTATACCATCTATGTTTCCTGCGGGAAGTGCTCCTCCGCT 489
Query 324 TTCGCCAAGGAGTTGTGGTTCACCGCGTACAACCAAACAGAGAGCCCCTTCTAACTTAGG 383
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 490 TTCACCAAGGAGTTGTGGTTCACCCCGTACAACCAAACAGAGAGCCCCTTCTAACTTAGG 549
Query 384 TTCTACTCTGAAAGTTGTCAACGAGCCTGTTAAAGAGCCAATACCTCAGTTTTATTTCCA 443
||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 550 TTCTACTCTCAAAGTAGTCAACGAGCCTGTTAAAGAGCCTATACCTCAGTTTTATTTCCA 609
Query 444 AAATGGTCGCCCCCCACCAAGCGAGATAAAAGAGCAATGTATGTTTAGAATCAATCACTT 503
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 610 AAATGGTCGCCCTCCACCAAGCGAGATTAAAGAGCAATGTATGTTTAGAATCAATCACTT 669
Query 504 CTTTTATGGTCACATGGATGGGTTACAGATACAAGAATTCAAATTAGTCACCAGAGAAAT 563
||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||
Sbjct 670 CTTTTATGGTCACATGGATGGCTTGCAGATACAAGAATTCAAGTTAGTCACCAGAGAAAT 729
Query 564 CTGCAAGCTCCCATCTTTCTTCTCCACTTCACTTTTCCAGAAGATCGATGC-CAATAATA 622
|||||||||||||||||||||||||||||| ||||||| |||||||||| | ||| ||||
Sbjct 730 CTGCAAGCTCCCATCTTTCTTCTCCACTTCCCTTTTCCGGAAGATCGAT-CTCAACAATA 788
Query 623 CAGGTTTTGTTACTAGAGAAGCATTTATTGATTATTGGGTAAACGGGAACATGTTGATAA 682
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 789 CAGGTTTTGTTACTAGAGATGCATTTATTGATTTTTGGGTAAACGGGAACATGTTGATAA 848
Query 683 TGGATACAACGACCCAAATCTTCAAGATACTAAAGCAGAAAGATCAGAGTTTCATTGTGA 742
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 849 TGGATACAACGACCCAAATCTTCAAGATACTAAAGCAGAAAGATCAGAGTTTCATTGTTA 908
Query 743 AGGATGATTTCAAACCCCTACTTAAAGAACTGTTGGCGACGCATCCTGGGCTAGAGTTCC 802
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 909 AGGATGATTTCAAACCACTACTCAAAGAACTGTTGGCGACGCATCCTGGGCTAGAGTTCC 968
Query 803 TGCAATCCACACCTGAATTTCAAGAAAGATATGCTGAAACTGTCACCTACCGAATATTTT 862
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 969 TGCAATCCACACCTGAATTCCAAGAAAGATATGCTGAAACTGTCACCTACCGAATATTTT 1028
Query 863 ATTACATAAATAGATCTGGCAATGGTCGAATTACATTTAGGGAGCTTAAACGGGGAAACT 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1029 ATTACATAAATAGATCTGGCAATGGTCGAATTACATTTAGGGAGCTTAAACGGGGAAACT 1088
Query 923 TAATTGATGCTATGCTACATGCTGATGAAGAAGAAGATATTAACAAAGTGTTGAGATACT 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1089 TAATTGATGCTATGCTACATGCTGATGAAGAAGAAGATATTAACAAAGTGTTGAGATACT 1148
Query 983 TCTCATATGAGCATTTCTATGTCATATACTGCAAGTTCTGGGAGCTGGATACGGATCACG 1042
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1149 TCTCGTATGAGCATTTCTATGTCATATACTGCAAGTTCTGGGAGCTGGATACGGATCACG 1208
Query 1043 ATTTCCTGATTGACAAAGAAAATCTTATGAGATATGGAAACCATGCTCTTACTTACCGGA 1102
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 1209 ATTTCCTGATTGACAAAGAAAATCTTATGCGATATGGAAACCATGCTCTTACCTACCGGA 1268
Query 1103 TTGTCGACAGAATATTCTCTCAGGTTGCTAGGAAGTTCACTAGCAAAGTTGAAGGGAAGA 1162
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct 1269 TTGTCGACAGAATATTCTCCCAGGTTGCTAGGAAGTTCACTAACAAAGTTGAAGGGAAGA 1328
Query 1163 TGGGGTATGAGGACTTTGTCTATTTCATACTTGCGGAAGAAGATAAATCGTCAGAGCCTA 1222
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 1329 TGGGGTATGAGGACTTTGTCTATTTCATTCTTGCGGAAGAAGATAAATCGTCAGTGCCTA 1388
Query 1223 GCCTAGAATATTGGTTTAAGTGCATAGACTTGGATGCAAATGGGATTATTACGCGAAATG 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1389 GCCTAGAATATTGGTTTAAGTGCATAGACTTGGATGCAAATGGGATTATTACGCGAAATG 1448
Query 1283 AGATGCAATTCTTTTATGAAGAGCAGTTGCATCGAATGGAGTGCATGGCGCAAGAGGCTG 1342
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1449 AGATGCAATTCTTTTATGAAGAGCAGTTGCATAGAATGGAGTGCATGGCGCAAGAGGCTG 1508
Query 1343 TTCTTTTCGAGGATATCTTATGTCAGATGATTGATATGATCGGACCAGAGAACGAAAGCC 1402
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1509 TTCTTTTCGAGGATATCTTATGTCAGATGATTGATATGATCGGACCTGAGAACGAAAGCC 1568
Query 1403 ATATAACGCTGCATGACCTGAAAGGCTCAAAGCTCTCTGGAAACGTCTTCAACATCCTTT 1462
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1569 ATATAACGCTGCATGACCTGAAAGGCTCAAAGCTCTCTGGAAACGTCTTCAACATCCTAT 1628
Query 1463 TTAATCTAAACAAATTTATGGCATTTGAAACACGGGATCCGTTCCTCATTCGTCAGGAGC 1522
||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 1629 TTAATCTCAACAAATTTATGGCATTTGAAACCCGGGATCCATTCCTCATTCGTCAGGAGC 1688
Query 1523 GTGAGAACCCTACATTGACAGACTGGGACCGTTTTGCACATAGAGAGTATATTAGGCTTT 1582
| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1689 GAGAGAACCCTACATTGACAGATTGGGACCGTTTTGCACATAGAGAGTATATTAGGCTAT 1748
Query 1583 CAATGGAAGAAGATGTTGAAGATGCATCCAATGGAAGTGCTGAGGTTTGGGATGAGTCGT 1642
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1749 CAATGGAAGAAGATGTTGAAGATGCATCTAATGGAAGTGCTGAGGTTTGGGATGAGTCGT 1808
Query 1643 CACTGGAGGCTCCCTTCTGAGTTCATTAAGGTAAGGGAAATGAAAAGTTCCTGAGAAGAT 1702
| |||||||||||||| ||||||||| ||| ||| |||||| ||||| ||||||||||
Sbjct 1809 CGCTGGAGGCTCCCTTTTGAGTTCATAAAG--AAGAGAAATGTAAAGTCCCTGAGAAGAA 1866
Query 1703 TCATT-GGAGCTTTGTCGAGGAATGAAAGTGAAAAACAAACAAAAAGCCGGTAGTGCCCT 1761
|||| |||||||||| |||||| ||||||||||||||||| ||||||||||||| |||
Sbjct 1867 -CATTTGGAGCTTTGTTGAGGAAGGAAAGTGAAAAACAAACGAAAAGCCGGTAGTATCCT 1925
Query 1762 CTGTTGAA--C--T--T-AGCTTCGATTCGTTTTCTAACATATCTTCATTGGTTAGCTTT 1814
|||||||| | | | ||||| |||| |||||||||| | |||| ||| |||||||
Sbjct 1926 CTGTTGAATACCATACTTAGCTTGGATTTGTTTTCTAACTTCTCTTTATTTGTTAGCTGA 1985
Query 1815 TTAATACAGT-ATATTTATT-------G---A--T---A-A-TCTTCTTCACCTGTATTG 1856
|| |||||| ||||||||| | | | | | ||||||||||||||||||
Sbjct 1986 TTC-TACAGTTATATTTATTAACAATCGTCTAGATTTTACAGTCTTCTTCACCTGTATTG 2044
Query 1857 CATTCACTTTGCTCTGATGTTTCTATCTCTGGGTGTTACTTCATCATCTCCAGATGTTGA 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2045 CATTCACTTTGCTCTGATGTTTCTATCTCTGGGTGTTACTTCATCATCTCCAGATGTTGA 2104
Query 1917 GAATTGTGAAAATCAATGCTATAGTTCCTTT 1947
|| ||||||| |||||||||||||||||||
Sbjct 2105 GACTTGTGAATTTCAATGCTATAGTTCCTTT 2135
> AT5G28850.2 | Symbols: | Calcium-binding EF-hand family protein
| chr5:10876815-10881444 REVERSE LENGTH=2322
Length=2322
Score = 2665 bits (1443), Expect = 0.0
Identities = 1579/1645 (96%), Gaps = 7/1645 (0%)
Strand=Plus/Plus
Query 28 TCTCGACTTTG-TTC--TTGATTGAATATGGTTGG-TTCGATTGTTCCCGGAGACATGGC 83
||||||||||| | | |||||| ||||||| ||| | || || |||||||||| |||||
Sbjct 140 TCTCGACTTTGATGCGATTGATTAAATATGG-TGGATACGGTTATTCCCGGAGATATGGC 198
Query 84 TTGTTTGGATGTAGATTTGTTGCAGCTTCAAGAAATGTCATCCTTTGTTCTGAATTCGAA 143
||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||
Sbjct 199 TTGTTTGGATGCAGATTTGTTGCAGCTTCAGGAAATGTCTTCCTTTGTTCTCAATTCTAA 258
Query 144 ACCTGGATTCACTCAAAAGCTCTTCGACCAGTGGCTTTCTCTTCCCGAATCCCATCGACA 203
||||||||||||||| ||||||||||||||||||||||||||||||||| | || |||||
Sbjct 259 ACCTGGATTCACTCAGAAGCTCTTCGACCAGTGGCTTTCTCTTCCCGAAGCTCAGCGACA 318
Query 204 GATTGGATCATTGCTTAAGGATGCTATAGCTGGAGCTCCTATAAATGTTACTGGAAGTGC 263
| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 319 GGTTGGATCATTGCTTAAGGATGCTGTAGCTGGAGCTCCTATCAATGTTACTGGAAGTGC 378
Query 264 ATCGGGTTCAAATTCTGCTACTATACCATCTATGTTTCCTGCGGGAAGTGCTCCTCCGCT 323
||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| ||
Sbjct 379 ATCGGGTTCTAATTCTGCCACTATACCATCTATGTTTCCTGCGGGAAGCGCTCCTCCTCT 438
Query 324 TTCGCCAAGGAGTTGTGGTTCACCGCGTACAACCAAACAGAGAGCCCCTTCTAACTTAGG 383
||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 439 TTCACCAAGAAGTTGTGGTTCACCCCGTACAACCAAACAGAGAGCCCCTTCTAACTTAGG 498
Query 384 TTCTACTCTGAAAGTTGTCAACGAGCCTGTTAAAGAGCCAATACCTCAGTTTTATTTCCA 443
||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 499 TTCTACTCTCAAAGTAGTCAACGAGCCTGTTAAAGAGCCTATACCTCAGTTTTATTTCCA 558
Query 444 AAATGGTCGCCCCCCACCAAGCGAGATAAAAGAGCAATGTATGTTTAGAATCAATCACTT 503
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 559 AAATGGTCGCCCTCCACCAAGCGAGATTAAAGAGCAATGTATGTTTAGAATCAATCACTT 618
Query 504 CTTTTATGGTCACATGGATGGGTTACAGATACAAGAATTCAAATTAGTCACCAGAGAAAT 563
||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||
Sbjct 619 CTTTTATGGTCACATGGATGGCTTGCAGATACAAGAATTCAAGTTAGTCACCAGAGAAAT 678
Query 564 CTGCAAGCTCCCATCTTTCTTCTCCACTTCACTTTTCCAGAAGATCGATGC-CAATAATA 622
|||||||||||||||||||||||||||||| ||||||| |||||||||| | ||| ||||
Sbjct 679 CTGCAAGCTCCCATCTTTCTTCTCCACTTCCCTTTTCCGGAAGATCGAT-CTCAACAATA 737
Query 623 CAGGTTTTGTTACTAGAGAAGCATTTATTGATTATTGGGTAAACGGGAACATGTTGATAA 682
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 738 CAGGTTTTGTTACTAGAGATGCATTTATTGATTTTTGGGTAAACGGGAACATGTTGATAA 797
Query 683 TGGATACAACGACCCAAATCTTCAAGATACTAAAGCAGAAAGATCAGAGTTTCATTGTGA 742
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 798 TGGATACAACGACCCAAATCTTCAAGATCCTAAAGCAGAAAGATCAGAGTTTCATTGTTA 857
Query 743 AGGATGATTTCAAACCCCTACTTAAAGAACTGTTGGCGACGCATCCTGGGCTAGAGTTCC 802
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 858 AGGATGATTTCAAACCACTACTTAAAGAACTGTTGGCGACGCATCCTGGCCTAGAGTTCC 917
Query 803 TGCAATCCACACCTGAATTTCAAGAAAGATATGCTGAAACTGTCACCTACCGAATATTTT 862
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 918 TGCAATCCACACCTGAATTCCAAGAAAGATATGCTGAAACTGTCACCTACAGAATATTTT 977
Query 863 ATTACATAAATAGATCTGGCAATGGTCGAATTACATTTAGGGAGCTTAAACGGGGAAACT 922
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 978 ACTACATAAATAGATCTGGCAATGGTCGAATTACATTTAGGGAGCTTAAACGGGGAAACT 1037
Query 923 TAATTGATGCTATGCTACATGCTGATGAAGAAGAAGATATTAACAAAGTGTTGAGATACT 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1038 TAATTGATGCTATGCTACATGCTGATGAAGAAGAAGATATTAACAAAGTGTTGAGATACT 1097
Query 983 TCTCATATGAGCATTTCTATGTCATATACTGCAAGTTCTGGGAGCTGGATACGGATCACG 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1098 TCTCATATGAGCATTTCTATGTCATATACTGCAAGTTCTGGGAGCTGGATACGGATCACG 1157
Query 1043 ATTTCCTGATTGACAAAGAAAATCTTATGAGATATGGAAACCATGCTCTTACTTACCGGA 1102
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1158 ATTTCCTGATTGACAAAGAAAATCTTATGAGATATGGAAACCATGCTCTTACCTACCGGA 1217
Query 1103 TTGTCGACAGAATATTCTCTCAGGTTGCTAGGAAGTTCACTAGCAAAGTTGAAGGGAAGA 1162
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1218 TTGTCGACAGAATATTCTCCCAGGTTGCTAGGAAGTTCACTAGCAAAGTTGAAGGGAAGA 1277
Query 1163 TGGGGTATGAGGACTTTGTCTATTTCATACTTGCGGAAGAAGATAAATCGTCAGAGCCTA 1222
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 1278 TGGGGTATGAAGACTTTGTCTATTTCATTCTTGCGGAAGAAGATAAATCGTCAGTGCCTA 1337
Query 1223 GCCTAGAATATTGGTTTAAGTGCATAGACTTGGATGCAAATGGGATTATTACGCGAAATG 1282
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1338 GCCTAGAATATTGGTTTAAGTGCATAGACTTGGATGCAAATGGGATTATAACGCGAAATG 1397
Query 1283 AGATGCAATTCTTTTATGAAGAGCAGTTGCATCGAATGGAGTGCATGGCGCAAGAGGCTG 1342
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1398 AGATGCAATTCTTTTATGAAGAGCAGTTGCATAGAATGGAGTGCATGGCGCAAGAGGCTG 1457
Query 1343 TTCTTTTCGAGGATATCTTATGTCAGATGATTGATATGATCGGACCAGAGAACGAAAGCC 1402
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1458 TTCTTTTCGAGGATATCTTATGTCAGATGATTGATATGATCGGACCTGAGAACGAAAGCC 1517
Query 1403 ATATAACGCTGCATGACCTGAAAGGCTCAAAGCTCTCTGGAAACGTCTTCAACATCCTTT 1462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1518 ATATAACGCTGCATGACCTGAAAGGCTCAAAGCTCTCTGGAAACGTCTTCAACATCCTTT 1577
Query 1463 TTAATCTAAACAAATTTATGGCATTTGAAACACGGGATCCGTTCCTCATTCGTCAGGAGC 1522
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1578 TTAATCTAAACAAATTTATGGCATTTGAAACCCGGGATCCGTTCCTCATTCGTCAGGAGC 1637
Query 1523 GTGAGAACCCTACATTGACAGACTGGGACCGTTTTGCACATAGAGAGTATATTAGGCTTT 1582
| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 1638 GCGAGAACCCGACATTGACAGACTGGGACCGTTTTGCACATAGAGAGTATATTCGGCTAT 1697
Query 1583 CAATGGAAGAAGATGTTGAAGATGCATCCAATGGAAGTGCTGAGGTTTGGGATGAGTCGT 1642
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1698 CAATGGAAGAAGATGTTGAAGATGCATCCAATGGAAGTGCTGAGGTTTGGGATGACTCGT 1757
Query 1643 CACTGGAGGCTCCCTTCTGAGTTCA 1667
|||||||||||||||||||||||||
Sbjct 1758 CACTGGAGGCTCCCTTCTGAGTTCA 1782
> AT1G54450.1 | Symbols: | Calcium-binding EF-hand family protein
| chr1:20336340-20339535 REVERSE LENGTH=1838
Length=1838
Score = 809 bits (438), Expect = 0.0
Identities = 1034/1316 (79%), Gaps = 64/1316 (5%)
Strand=Plus/Plus
Query 378 CTTAGGTTCTACTCTGAAAGTTGTCAAC-GAGCCTGTTAAAGAGC-CAATACCTCAGTTT 435
|||| ||||| |||| ||||| || | || | ||||||||| | | || |||||||||
Sbjct 328 CTTA-GTTCTCCTCTCAAAGTAGT-TTCTGATCATGTTAAAGAACTC-ATTCCTCAGTTT 384
Query 436 TA-TTTCCAAAATGGTCGCCCCCCACCAAGCGAGATAAAAGAGCAATGTAT-GTTTAGAA 493
|| ||| || ||||||| || ||||||| || |||||||||| || || | | || |
Sbjct 385 TACTTT-GAAGATGGTCGGCCACCACCAAATGATCTAAAAGAGCAGTGCATAGCTAAG-A 442
Query 494 TCAATCACTTC-TTT-TATGGTCAC-ATGGATGGGTTACAGA-TACAAGAATTCAAATTA 549
||||| | || ||| ||||| ||| | |||||| || || | | |||||||| ||||||
Sbjct 443 TCAAT-A-GTCTTTTCTATGGCCACGA-GGATGGTTTGCA-ACTCCAAGAATTTAAATTA 498
Query 550 GTCACCAGAGAAATCTGC-AAGCTCCCATC-TTTCTTCTCCA-CTTCACTTTTCCAG-AA 605
||||| | ||||| ||| ||| | ||||| ||| || |||| || || ||||| || ||
Sbjct 499 GTCACTACTGAAATATGCAAAG-TTCCATCATTT-TTTTCCACCTCCA-TTTTCAAGAAA 555
Query 606 GATCGATGCCAATAATACAGGTTTTGTTACTAGAGAAGCA-TTTATTGATTATTGGGTAA 664
| | ||| ||||||| || |||||||| | ||||||| | || |||||||||||||| |
Sbjct 556 G-TTGATACCAATAACACTGGTTTTGTGAAAAGAGAAG-ACTTCATTGATTATTGGGTTA 613
Query 665 ACGGG-AACATGTTGATAATGGATACAACGACCCAAATCTTCA-AGATACTAAAGCAGAA 722
| ||| || ||||| | || ||| | ||| | ||| | || | | ||| | ||||||
Sbjct 614 A-GGGAAATATGTTAACAAAGGAGATAACAAGTCAAGTATTTACA-ATATTGAAGCAGCC 671
Query 723 AGATCAGAGTTTCATTGTGAAGGATGATTTCAAACCCCTACTTAAAGAACTGTTGGCGAC 782
|||||| | | | |||| ||||||||||||| || | ||| ||||| | ||||| ||
Sbjct 672 AGATCACAACTACCTTGTCCAGGATGATTTCAAGCCAGTGCTTCAAGAATTATTGGCAAC 731
Query 783 GCATCCTGGGCTAGAGTTCCTGCAATCCACACCTGAATTTCAAGAAAGATATGCTGAAAC 842
|| ||||| || || ||| ||||| |||||| |||||||| || ||||||||||||||
Sbjct 732 ACACCCTGGTCTTGAATTCTTGCAAGGCACACCGGAATTTCAGGATAGATATGCTGAAAC 791
Query 843 TGTCACCTACCGAATATTTTATTACATAAATA-GATCTGGCAATGGTCGA-ATTACATTT 900
||| | ||| |||||| ||| |||||||||| || ||| ||||| | | |||| ||
Sbjct 792 TGTAATATACAGAATATATTACTACATAAATAGGA-GTGGAAATGGGC-ATCTTACCTTG 849
Query 901 AGGGAGCTTAAACGGGGAAACTTAATTGATGCTATGCTA-CATGCTGATGAAGAAGAAGA 959
|| |||||||| || ||||| ||| |||| || |||| | ||||| ||||||||||| ||
Sbjct 850 AGAGAGCTTAAGCGAGGAAATTTAGTTGACGCAATGC-AGCATGCCGATGAAGAAGAGGA 908
Query 960 TATTAACAAAGTGTTGAGATACTTCTCATATGAGCATTTCTATGTCATATACTGCAAGTT 1019
|| || || |||||||| |||||||| ||||| ||||||||||||||||||||||||||
Sbjct 909 CATCAATAAGGTGTTGAGGTACTTCTCGTATGAACATTTCTATGTCATATACTGCAAGTT 968
Query 1020 CTGGGAGCTGGATACGGATCACGATTTCCTGATTGACAAAGAAAATCTTATGAGATATGG 1079
||||||| ||||||| ||||| |||||| | || |||||||| ||||| || ||||| |
Sbjct 969 CTGGGAGTTGGATACAGATCATGATTTCTTAATCGACAAAGAGAATCTCATCCGATATAG 1028
Query 1080 AAACCATGCTCTTACTTACCGGATTGTCGA-CAGAATATTCTCTCAGGTTGCTAGGAAGT 1138
|||||||| || || || |||||||||| | |||| || || ||||| | |||||||
Sbjct 1029 TAACCATGCGCTCACCTATAGGATTGTCGATC-GAATCTTTTCACAGGTACCGAGGAAGT 1087
Query 1139 TCACTAGCAAAGTTGAAGGGAAGATGGGGTATGAGGACTTTGTCTATTTCATACTTG-CG 1197
| ||||| ||| ||||| |||||||| |||||||| ||||| || |||||| ||| |
Sbjct 1088 TTACTAGTAAAACCGAAGGAAAGATGGGTTATGAGGATTTTGTTTACTTCATA-TTGGCT 1146
Query 1198 GAAGAAGATAAATCGTCAGAGCCTAGCCTAGAATATTGGTTTAAGTGCATAGACTTGGAT 1257
|||||||| || || ||||| ||||| || || |||||||| |||||||| || ||||||
Sbjct 1147 GAAGAAGACAAGTCATCAGAACCTAGTCTTGAGTATTGGTTCAAGTGCATTGATTTGGAT 1206
Query 1258 GCAAATGG-GATTATT-ACGCGAAATGAGATGCAATTCTTTTATGAAGAGCAGTTGCATC 1315
|||||||| | || || ||||| || ||| ||||||||||||| || |||||| | |||
Sbjct 1207 GCAAATGGAG-TT-TTGACGCGGAACGAGCTGCAATTCTTTTACGAGGAGCAGCTACATA 1264
Query 1316 GAATGGAGTGCATGGCGCAAGAGGC--TGTTCTTTTCGAGGATATCTTATGTCAGATGAT 1373
||||||| ||||||||||||||||| |||| ||| |||||||| || || || || ||
Sbjct 1265 GAATGGAATGCATGGCGCAAGAGGCGGTGTTGTTT--GAGGATATTTTGTGCCA-ATTAT 1321
Query 1374 T-GATATGATCGGACCAGAGAACGAAAGC--CATATAACGCTGCATGACCTGAAAGGCTC 1430
| || ||| || ||||||| ||||| | ||| | | | |||| |||| || ||
Sbjct 1322 TCGACATGGTCAAACCAGAGGACGAAGGGTTCATTTGTC--TAAATGATTTGAAGGGTTC 1379
Query 1431 -AAAGCTCTCTGGAAACGTCTTCAACATCCTTTTTAATCTAAACAAATTTATGGCATTTG 1489
||| || |||||||| ||||||||||| |||||||| || ||||| |||||||| ||||
Sbjct 1380 TAAA-CTTTCTGGAAATGTCTTCAACATACTTTTTAACCTCAACAAGTTTATGGCGTTTG 1438
Query 1490 AAACACGGGATCCGTTCCTCATTCGTCAGGAGCGTG-AGAACCCTACATTGACAGACTGG 1548
|||| || ||||| |||||||| || |||||||| | | || || |||| |||||| |||
Sbjct 1439 AAACGCGTGATCCCTTCCTCATCCGCCAGGAGCGCGCA-AATCCGACATGGACAGAGTGG 1497
Query 1549 GACCGTTTTGCACATAGAGAGTATATTAGGCTTTCAATGGAAGAAGATGTTGAAGATGCA 1608
|| |||||||| |||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct 1498 GATCGTTTTGCTCATAGAGAATATATTAGGCTATCAATGGAAGAAGATGTCGAAGATGCT 1557
Query 1609 TCCAATGGAAGTGCTGAGGTTTGGGATGAGTCGTCACTGGAGGCTCCC-TTCTGAG 1663
|| |||||||||||||| | ||||| || | ||||| |||| |||| || ||||
Sbjct 1558 TCTAATGGAAGTGCTGAAGCATGGGACGA--C-TCACTTGAGG-TCCCCTTTTGAG 1609
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 96435246945
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5