BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489671
Length=1875
Score E
Sequences producing significant alignments: (Bits) Value
AT5G28910.2 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 2719 0.0
AT5G28960.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 1941 0.0
> AT5G28910.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G28960.1); Has 82 Blast hits to 80 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
0; Plants - 78; Viruses - 0; Other Eukaryotes - 3 (source: NCBI
BLink). | chr5:10930586-10932999 REVERSE LENGTH=1992
Length=1992
Score = 2719 bits (1472), Expect = 0.0
Identities = 1712/1827 (94%), Gaps = 19/1827 (1%)
Strand=Plus/Plus
Query 63 TTTTATCTCAGAAAAGAAACAAAAAGTTAGAGAAATATCATGTGATTTCTGGTTAATAGT 122
|||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 136 TTTTGTCTTAGAAAAGAAACAAAAAGTTGGAGAAATATCATGTGATTTCTGGTTGATAGT 195
Query 123 TGGTAAGGTGTGGTGGCTATAAAAGAAAGCATTTACTGAGAAAAGCTTTTGTTTCCTT-G 181
|||||| || ||||||| |||||||||||||| | ||||||| ||||||||| |||
Sbjct 196 TGGTAA-AAGT-GTGGCTACAAAAGAAAGCATTTTCCGAGAAAATCTTTTGTTTTCTTAA 253
Query 182 GGAAAATTTTCAGTTACAAAATAGAAGGAGAAGAAACTGGGTTTGGTTCTTTAGTGACC- 240
| |||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 254 GAAAAAATTTCAGTTACAAAATAGAAGGAGAAGAAATTGGGTTTGGTTATTTAGTGACCA 313
Query 241 --------AAAAA-TAGAGTTACTATGAGCATGAAGTCATTAGAGAGAGTGGTTTCAGAG 291
||||| |||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 314 ATATAGAGAAAAACTAGAGTTAGTATGAGCATGAAGTCATTAGAAAGAGTGGTTTCAGAG 373
Query 292 AAAGCATTAAAACTTGGAAATTCATTTCCATGTCAAATCTGTGTAGTTGGGTTTCTATGT 351
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 374 AGAGCATTAAAACTTGGAAATTCATTTCCATGTCAAATATGTGTAGTTGGGTTTCTATGT 433
Query 352 GGAATCTGTCTCACTTCACTTTTCTTAGCTGCTCTCACTTCTCTTGGCACCTTCGAGTTC 411
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 434 GGAATCTGTCTCACTTCACTCTTCTTAGCTGCTCTCACTTCTCTTGGCACCTTCGAATTC 493
Query 412 ACCGCCTTCTCCTTCACCTCCACTTCCTCTGTTTTTCCTCCTTGCAATTCCTCCACCTCT 471
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 494 GCCGCCTTCTCCTTCACCTCCTCTTCCTCTGTTTTTCCTCCTTGCAATTCCTCCACCTCT 553
Query 472 CACATCATCAATATGGTTGCAAGCATAGACCGGAAACTGAAATGGAAGAACAAAGTTGAG 531
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 554 CACATCATCAATATGGTTGCAAGTATAGACCGGAAACTGAAATGGAAGAACAAAGTTGAG 613
Query 532 ACAGAAGAAGAAGATGAAGTGAAACTTTTGGTCTCTGCTTGGGATAATTTATTACTAAAT 591
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 614 ATAGAAGAAGAAGATGAAGTGAAACTTTTGGTCTCTGCTTGGGATAATTTATTACTAAAT 673
Query 592 GAAGAAGACTTCTTGAAGATGGTAGGGATGAACAAATCCGATGTACCAAATGGTCCACAT 651
||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||
Sbjct 674 GAAGAAGACTTCTTGAAGAAGGTAGGTATTAACAAATCCGATGTACCAAATGGTCCACAT 733
Query 652 TTGGATAATTGTAAGGAGAAGGCACGAGTTAGGGAGCGTTTGGATACACGGATAGCGAAT 711
||||| |||||| |||||||||| |||||||||||||||||||||||||| | |||||
Sbjct 734 TTGGAGAATTGTGAGGAGAAGGCTCGAGTTAGGGAGCGTTTGGATACACGTTTGGCGAA- 792
Query 712 C-GGACA-TTCCCTTCTTGGATCAGTGGAGGAGATGAAGAGAATTATCCGTTAACGAGGA 769
| ||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 793 CTGGACACTT-CCTCCTTGGATCAGTGGAGGAGATGAAGAGAATTATCCGTTAACGAGGA 851
Query 770 GAGTGCAACGTGAGATATGGATTCATCAGCATCCTTTGGACTGTC-AAAACAAGAGTCTC 828
|||||||| | || |||||||||||||||||||||||||| || | |||||||||||||
Sbjct 852 GAGTGCAAAGAGATATATGGATTCATCAGCATCCTTTGGATTG-CGGAAACAAGAGTCTC 910
Query 829 AAGTTCCTTGTAGCTGATTGGGAAACGCTTCCTGGTTTTGGAATAGGAGCTCAGATCGCT 888
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 911 AAGTTCCTTGTAGCTGATTGGGAAACACTTCCTGGTTTTGGAATAGGAGCTCAGATAGCT 970
Query 889 GGAATGACTGGTCTTCTCGCGATAGCTATAAAAGAAAACCGAGTGCTCGTTACAAATCAC 948
|||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||| ||
Sbjct 971 GGAATGACTGGTCTACTCGCGATAGCTATAAATGAAAACCGAGTGCTTGTTGCAAATTAC 1030
Query 949 TACAACCGAGCAGATCATGATGGTTGCAAAGGTTCTTCTCGTGGAAGCTGGTCATGCTAT 1008
||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||
Sbjct 1031 TACAACCGAGCAGATCATGATGGTTGCAAAGGTTCTTTTCGTGGAAACTGGTCTTGCTAT 1090
Query 1009 TTTCTACCGGAAACGTCGGAAGAGTGTCGGAAACGCGCGTTTGCGATTGTGAAGAAGAGA 1068
||||||| ||||||||| ||||||||||| ||||| || |||||||||||||||||||||
Sbjct 1091 TTTCTACAGGAAACGTCAGAAGAGTGTCGAAAACGAGCCTTTGCGATTGTGAAGAAGAGA 1150
Query 1069 GAAGCGTGGGAGAGTGGGATTGTTACAGGGAAACAAAACTACACCACAAAGGAGATTTGG 1128
|||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||
Sbjct 1151 GAAGCGTGGGAGAGTGGGATTGTTACAGGGAAACAAAATTATAGCACAAAGGAGATTTGG 1210
Query 1129 GCTGGGCCTATACCAAAGCTATGGGGTAAGCCTTGGAGTTATATGAAGCCGACTACGGAA 1188
|||||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||
Sbjct 1211 GCTGGGGCTATACCAAAGCAATGGGGTAAGCCTTGGAGTTATATGAAGCCAACTACAGAA 1270
Query 1189 ATCAATGGAAGTTTAATCTCCAGTCACCGGAAAATGGATCGGAGATGGTGGAGAGCACAA 1248
||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 1271 ATCAACGGAAGTTTAATCTCCAATCATCGGAAAATGGATCGGAGATGGTGGAGAGCACAA 1330
Query 1249 GCAGTGAGATACTTGATGAGATTTCAAACGGAATACACTTGCGGTTTGATGAACGCTGCT 1308
|||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||
Sbjct 1331 GCAGTGAGATACTTGATGAGATATCAAACAGAATACACTTGCGGTTTGATGAACATTGCT 1390
Query 1309 CGAAATTCCGCGTTTGGAAAAGAGGCTGCCAAGATTGTTCTCTCTGCAGGAGATTGGAGA 1368
||||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||
Sbjct 1391 CGAAATTCCGCGTTTGGAAAAGAAGCTGCCAAGATTGTTCTTTCAGCTGGAGATTGGAGA 1450
Query 1369 AAGAAGAATAAGAAGATTAAGACACAGATTGAGGAACAGGTGTGGTCAGATCACAAGCCA 1428
||||||||||||||||| | |||| |||||||||||||||||||||| |||||||||||
Sbjct 1451 AAGAAGAATAAGAAGATGAGGACAGAGATTGAGGAACAGGTGTGGTCGGATCACAAGCCG 1510
Query 1429 TGGATACCAAGGCCAATGCTGAGTGTTCACGTGCGGATGGGAGACAAAGCATGCGAGATG 1488
||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1511 TGGCTTCCAAGGCCAATGCTGAGTGTTCACGTACGGATGGGAGACAAAGCATGCGAGATG 1570
Query 1489 AGAGTCGCAGCTTTAGAAGAATACATGCGTTTAGCTGATCGGATCAGAGATCGGTTTCCA 1548
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 1571 AGAGTCGCAGCTTTAGAAGAGTACATGCATTTAGCTGATCGGATCAGAGATCGGTTTCCA 1630
Query 1549 GAGCTCAACAGGATCTGGCTGTCTACAGAGATGAAGGAAGTTGTGGACAGAAGTGAAGAC 1608
|||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||
Sbjct 1631 GAGCTCAACAGGATCTGGCTCTCTACAGAGATGAAGGAAGTGGTGGACAGAAGTAAAGAT 1690
Query 1609 TATGCTCACTGGAGATTTTATTACACGAAAGTGGCAAGACAAGTCGGTAATAAGTCCATG 1668
||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||
Sbjct 1691 TATGCTCACTGGAGATTCTATTACACGGAAGTGGCAAGACAAGTCGGTAATAAGTCGATG 1750
Query 1669 GCTGAGTATGAAGCAAGCCTCGGGAGAGAGATGAGTACAAACTATCCTCTGGTTAACTTC 1728
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1751 GCTGAGTATGAAGCGAGCCTCGGGAGAGAGATGAGCACAAACTATCCTCTGGTTAACTTC 1810
Query 1729 TTAATGGCATCAGACGCTGATTTCTTCGTCGGAGCATTGGGTTCCACTTGGTGTTTCCTC 1788
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1811 TTAATGGCGTCAGAAGCTGATTTCTTCGTCGGAGCATTGGGTTCCACTTGGTGTTTCCTC 1870
Query 1789 ATCGATGGTATGAGGAATACGGGTGGGAAAGTCATGTCTGGTTATCTCAGTGTCAATAAA 1848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1871 ATCGATGGTATGAGGAATACGGGTGGGAAAGTCATGTCTGGTTATCTCAGTGTCAATAAA 1930
Query 1849 GATCGGTTCTGGTAACTTTGCCAGTTC 1875
||||||||||||||||||||| |||||
Sbjct 1931 GATCGGTTCTGGTAACTTTGCGAGTTC 1957
> AT5G28960.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G28910.2); Has
30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink). | chr5:10996591-10998783 FORWARD LENGTH=1611
Length=1611
Score = 1941 bits (1051), Expect = 0.0
Identities = 1438/1624 (89%), Gaps = 29/1624 (2%)
Strand=Plus/Plus
Query 256 ATGAGCATGAAGTCATTAG-AGAGAGTGGTTTCAGAGAAAGCATTAAAACTTGGAAATTC 314
||||||||||||||||| | | ||| ||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGCATGAAGTCATT-GAACAGAATGGTTTCAGAGAAAGCATTAAAACTTGGAAATTC 59
Query 315 ATTTCCATGTCAAATCTGTGTAGTTGGGTTTCTATGTGGAATCTGTCTCACTTCACTTTT 374
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||
Sbjct 60 ATTTCCATGTCAAATCTGTGTAGTTGGGATTCTATGTGGAATCTGTTTCACTTCACTCTT 119
Query 375 CTTAGCTGCTCTCACTTCTCTTGGCACCTTCGAGTTCACCGCCTTCTCCTTCACCT-CCA 433
|||||| ||||| ||||| ||||||||||||||| || | |||||||| || | || ||
Sbjct 120 CTTAGCAGCTCTTACTTCCCTTGGCACCTTCGAGCTCGCAGCCTTCTCTTT-ATCTGCCT 178
Query 434 CTTCCTCTGTTTTTCCTCCTTGCAATTCCTCCACCTCTCACATCATCAATATGGTTGCAA 493
| ||||||| ||||| ||||| ||||||| || |||||||| ||| |||||||| |||
Sbjct 179 CCTCCTCTGCTTTTCTTCCTTACAATTCC---ACTTCTCACATTATCCATATGGTTTCAA 235
Query 494 GCATAGACCGGAAACTGAAATGGAAGAACAAAGTTGAGACAGAAGA-A--GAAGATGAAG 550
|||| ||||||||| ||||||||| |||||||| ||||| || ||| | || ||| |||
Sbjct 236 GCATGGACCGGAAATTGAAATGGACGAACAAAGCTGAGAAAGGAGATAATGATGATCAAG 295
Query 551 TGAAACTTTTGGTCTCTGCTTGGGATAATTTATTACTAAATGAA-GAAGACTTCTTGAAG 609
| ||||||||||||||||||||||| |||||| ||||||| || |||||||||||||||
Sbjct 296 TAAAACTTTTGGTCTCTGCTTGGGACAATTTAGTACTAAAC-AATGAAGACTTCTTGAAG 354
Query 610 ATGGTAGGGATGAACAAATCCGATGTACCAAATGGTCCACATTTGGATAATTGTAAGGAG 669
| |||||||||||||||||||||||||||| | |||||||||||| |||||| ||| |
Sbjct 355 AAACTAGGGATGAACAAATCCGATGTACCAAACGCTCCACATTTGGAGAATTGTGAGGTG 414
Query 670 A-AGGCACGAGTTAGGGAGCGTTTGGATACACGGATAGCGAATCGGACATTCCCTTCTTG 728
| | ||||||||||||||||||| ||||||||||||||||| | | | || ||| ||||
Sbjct 415 ATAT-CACGAGTTAGGGAGCGTTTAGATACACGGATAGCGAACCAGTCGTTTCCTACTTG 473
Query 729 GATCAGTGGAGGAGATGAAGAGAATTATCCGTTAACGAGGAGAGTGCAACGTGAGATATG 788
||||| ||||||||| ||| |||| ||||||||||| |||| ||| ||| ||||||||||
Sbjct 474 GATCACTGGAGGAGACGAACAGAACTATCCGTTAACTAGGATAGTACAAAGTGAGATATG 533
Query 789 GATTCATCAGCATCCTTTGGACTGTC-AAAAC-AAGAGTCTCAAGTTCCTTGTAGCTGAT 846
||||||||| |||||||||||||| | ||||| || | | ||||||||||||||| ||||
Sbjct 534 GATTCATCAACATCCTTTGGACTG-CGAAAACGAA-ACTGTCAAGTTCCTTGTAGTTGAT 591
Query 847 TGGGAAACGCTTCCTGGTTT-TGGAATA-GGAGCTCAGATCGCTGGAATGACTGGTCTTC 904
|||||||| |||||| ||| |||| | |||||||||||| ||| ||||||||||||||
Sbjct 592 TGGGAAACACTTCCTA-TTTATGGA-TCCGGAGCTCAGATCACTGAAATGACTGGTCTTC 649
Query 905 TCGCGATAGCTATAAAAGAAAACCGAGTGCTCGTTACAAATCACTACAACCGAGCAGATC 964
|||| || |||||||| |||||||||||||| ||| ||||||| || |||||||||||||
Sbjct 650 TCGCAATCGCTATAAACGAAAACCGAGTGCTTGTTGCAAATCATTATAACCGAGCAGATC 709
Query 965 ATGATGGTTGCAAAGGTTCTTCTCGTGGAAGCTGGTCATGCTATTTTCTACCGGAAACGT 1024
|||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 710 ATGATGGTTGCAGAGGTTCTTCTCGTGGAAGATGGTCATGCTATTTTCTACCTGAAACGT 769
Query 1025 CGGAAGAGTGTCGGAAACGCGCGTTTGCGATTGTGAAGA-AGAGAGAAGCGTGGGAGAGT 1083
||||||||||||||||||||||||||||| |||| ||| ||| |||||| |||||||||
Sbjct 770 CGGAAGAGTGTCGGAAACGCGCGTTTGCGGTTGT-AAGGGAGAAAGAAGCATGGGAGAGT 828
Query 1084 GGGATTGTTACAGGGAAACAAAACTACACCACAAAGGAGATTTGGGCTGGGCCTATACCA 1143
|| | ||||||||||||||||||||||| | |||||| ||| |||||||| |||||||||
Sbjct 829 GGTACTGTTACAGGGAAACAAAACTACAGCTCAAAGGTGATATGGGCTGGACCTATACCA 888
Query 1144 AAGCTATGGGGTAAGCCTTGGAGTTATATGAAGCCGACTACGGAAATCAATGGAAGTTTA 1203
|| |||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||
Sbjct 889 AAACTATGGGGTAAGCCTTGGAGTTATATGAAGCCTACTACAGAAATCAACGGAAGTTTA 948
Query 1204 ATCTCCAGTCACCGGAAAATGGATCGGAGATGGTGGAGAGCACAAGCAGTGAGATACTTG 1263
||||| | ||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 949 ATCTCTAAACACCGAAAAATGGATCGAAGATGGTGGAGAGCACAAGCAGTGAGATACTTG 1008
Query 1264 ATGAGATTTCAAACGGAATACACTTGCGGTTTGATGAACGCTGCTCGAAATTCCGCGTTT 1323
|||||||||||||| | ||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1009 ATGAGATTTCAAACTGCATACACTTGCGGTTTAATGAACGCTGCTCGAAACACCGCGTTT 1068
Query 1324 GGAAAAGAGGCTGCCAAGATTGTTCTCTCTGCAGGAGATTGGAGAAAGAAGAATAAGAAG 1383
|||||||| |||||| |||||||||| || || ||||||||||||||||| || |||||
Sbjct 1069 GGAAAAGAAGCTGCCGAGATTGTTCTTTCAGCGGGAGATTGGAGAAAGAACAAGAAGAAA 1128
Query 1384 A---TTAAGACACAGATTGAGGAACAGGTGTGGTCAGATC-ACAAGCCATGGATACCAAG 1439
| |||||||| ||||||||||||| || ||||| || | ||||||| ||| | |||||
Sbjct 1129 AAGGTTAAGACAGAGATTGAGGAACAAGTATGGTC-GAACCACAAGCCGTGGGTTCCAAG 1187
Query 1440 GCCAATGCTGAGTGTTCACGTGCGGATGGGAGACAAAGCATGCGAGATGAGAGTCGCAGC 1499
||||||||| ||||| ||||| ||||||||||||||||| || |||||||||||||| ||
Sbjct 1188 GCCAATGCTAAGTGTGCACGTACGGATGGGAGACAAAGCGTGTGAGATGAGAGTCGCGGC 1247
Query 1500 TTTAGAAGAATACATGCGTTTAGCTGATCGGATCAGAGATCGGTTTCCAGAGCTCAACAG 1559
||||||||| ||||||| ||||||||||||||||| |||||| ||||| ||||| ||||
Sbjct 1248 TTTAGAAGAGTACATGCATTTAGCTGATCGGATCAAAGATCGATTTCCGGAGCTTAACAA 1307
Query 1560 GATCTGGCTGTCTACAGAGATGAAGGAAGTTGTGGACAGAAGTGAAGACTATGCTCACTG 1619
||||||| |||||||||||||||||||||||||||||| |||| |||| |||| ||| ||
Sbjct 1308 GATCTGGTTGTCTACAGAGATGAAGGAAGTTGTGGACAAAAGTAAAGATTATGATCATTG 1367
Query 1620 GAGATTTTATTACACGAAAGTGGCAAGACAAGTCGGTAATAAGTCCATGGCTGAGTATGA 1679
|||||| ||||||||| ||||||| |||||||| ||||||||||| || |||||||||||
Sbjct 1368 GAGATTCTATTACACGGAAGTGGCGAGACAAGTTGGTAATAAGTCGATTGCTGAGTATGA 1427
Query 1680 AGCAAGCCTCGGGAGAGAGATGAGTACAAACTATCCTCTGGTTAACTTCTTAATGGCATC 1739
||| ||||| |||||||||| || || ||||||||||| ||||||||||||||||| ||
Sbjct 1428 AGCTAGCCTTGGGAGAGAGACAAGCACGAACTATCCTCTTGTTAACTTCTTAATGGCGTC 1487
Query 1740 AGACGCTGATTTCTTCGTCGGAGCATTGGGTTCCACTTGGTGTTTCCTCATCGATGGTAT 1799
||| |||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1488 AGAAGCTGATTTTTTCGTTGGAGCTTTGGGTTCCACTTGGTGTTTCCTCATCGATGGTAT 1547
Query 1800 GAGGAATACGGGTGGGAAAGTCATGTCTGGTTATCTCAGTGTCAATAAAGATCGGTTCTG 1859
||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 1548 GAGGAATACTGGTGGGAAAGTCATGTCCGGTTATCTTAGTGTCAATAAAGATCGGTTCTG 1607
Query 1860 GTAA 1863
||||
Sbjct 1608 GTAA 1611
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92820807705
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5