BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489724 Length=399 Score E Sequences producing significant alignments: (Bits) Value AT4G08895.1 | Symbols: | inorganic phosphate transporter famil... 593 3e-169 AT5G43340.1 | Symbols: PHT6, PHT1;6 | phosphate transporter 1;6... 305 2e-82 > AT4G08895.1 | Symbols: | inorganic phosphate transporter family protein | chr4:5697896-5698615 FORWARD LENGTH=468 Length=468 Score = 593 bits (321), Expect = 3e-169 Identities = 373/399 (93%), Gaps = 0/399 (0%) Strand=Plus/Plus Query 1 ATGACCAAGCTAGGGTTTCCACAGACGAGTTTGGCTTGTTCTCCAAGAAATTTCTTTGCC 60 ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||| | Sbjct 1 ATGACCAAGCTAGGGTTTCCAAAGACGAGATTGGCTTGTTCTCCAAGAAATTCCTTTGTC 60 Query 61 GTCACGGATATCTTCACCACCATAGGATGGTTACCTTCGGCTAAAACCATGAACGCAATC 120 |||||||||| |||||||||| | ||||||||||||||||||||||||||||||||| || Sbjct 61 GTCACGGATAGCTTCACCACCTTTGGATGGTTACCTTCGGCTAAAACCATGAACGCACTC 120 Query 121 CAAGAGCTCTACATGATCGCCAAGGCTCAAACCATAATCGCTTGTTGCAGTACCGTTCGT 180 || ||||||| |||||||| || |||||||||||||||||||||||||||||| |||| | Sbjct 121 CAGGAGCTCTTCATGATCGTCAGGGCTCAAACCATAATCGCTTGTTGCAGTACAGTTCCT 180 Query 181 GCCATACCGTACCACCATTGGACTTTACCGGCTAACCGGATTGGTTTTGTGGTTTTCTAC 240 ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct 181 GCCGTACCGTACCACCATTGGACTTTACCAGCTAACCGGATTGGTTTTGTGATTTTCTAC 240 Query 241 TCTCTCACCTTTTTCTTCTCCAATTTTGGACCTAACGCAACTACGTTCATTGTCCCGGCT 300 ||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 241 TCTTTCACCTTTTTCTTTTCCAATTTTGGACCTAATGCAACTACGTTCATTGTCCCGGCT 300 Query 301 GAGATTTTTCCGGCGAGGATTAGGTCTACTTGTCACGGTATCTCGGCTGCGTCGGGTAAA 360 |||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||| Sbjct 301 GAGATTTTTCCGGCGAGGATTAGGTCGACTTGTCACGGTATCTCCGCGGCGTCAGGTAAA 360 Query 361 GCCGGTGCGATGGTCGGTTCTTTCGGGTTTGCTGCGTTG 399 |||||||| |||||||||||||||||||||||||| ||| Sbjct 361 GCCGGTGCAATGGTCGGTTCTTTCGGGTTTGCTGCTTTG 399 > AT5G43340.1 | Symbols: PHT6, PHT1;6 | phosphate transporter 1;6 | chr5:17393598-17395148 REVERSE LENGTH=1551 Length=1551 Score = 305 bits (165), Expect = 2e-82 Identities = 196/211 (93%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 181 GCCATACCGTACCACCATTGGACTTTACCGGCTAACCGGATTGGTTTTGTGGTT-TTCTA 239 |||||||||||||| |||||||| ||||||||||||||||||||||| || ||| || || Sbjct 1171 GCCATACCGTACCATCATTGGACCTTACCGGCTAACCGGATTGGTTTCGTCGTTCTT-TA 1229 Query 240 CTCTCTCACCTTTTTCTTCTCCAATTTTGGACCTAACGCAACTACGTTCATTGTCCCGGC 299 |||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1230 CTCTTTCACATTTTTCTTCTCCAATTTTGGACCTAACGCAACTACTTTCATTGTCCCGGC 1289 Query 300 TGAGATTTTTCCGGCGAGGATTAGGTCTACTTGTCACGGTATCTCGGCTGCGTCGGGTAA 359 ||||||||| ||||||||||| ||||| |||||||||||||| ||||| ||||| ||||| Sbjct 1290 TGAGATTTTCCCGGCGAGGATAAGGTCGACTTGTCACGGTATATCGGCGGCGTCTGGTAA 1349 Query 360 AGCCGGTGCGATGGTCGGTTCTTTCGGGTTT 390 ||||||||||||||||||||||||||||||| Sbjct 1350 AGCCGGTGCGATGGTCGGTTCTTTCGGGTTT 1380 Score = 187 bits (101), Expect = 6e-47 Identities = 109/113 (96%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 66 GGATATCTTCACCACCATAGGATGGTTACCTTCGGCTAAAACCATGAACGCAATCCAAGA 125 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 960 GGATATCTTCACCACCATTGGGTGGTTACCTTCGGCTAAAACCATGAACGCAATCCAAGA 1019 Query 126 GCTCTACATGATCGCCAAGGCTCAAACCATAATCGCTTGTTGCAGTACCGTTC 178 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 1020 GCTCTACATGATCGCTAAGGCTCAAACCATAATCGCTTGTTGCAGCACCGTTC 1072 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 18850405875 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5