BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489729 Length=2322 Score E Sequences producing significant alignments: (Bits) Value AT4G08160.1 | Symbols: | glycosyl hydrolase family 10 protein ... 3332 0.0 > AT4G08160.1 | Symbols: | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | chr4:5159034-5162774 REVERSE LENGTH=2516 Length=2516 Score = 3332 bits (1804), Expect = 0.0 Identities = 2137/2300 (93%), Gaps = 13/2300 (1%) Strand=Plus/Plus Query 1 CTTAATCTTCTTCGCTTAGAACTTGCTATGGAGAAAAATACAAACATGAACCATACAAGT 60 ||||||||||||||||| ||||||||||||||||| |||||||| | ||||||||||||| Sbjct 54 CTTAATCTTCTTCGCTTGGAACTTGCTATGGAGAAGAATACAAATACGAACCATACAAGT 113 Query 61 GATGATGACAATGATAAGCATCACACTAACGAAGAACAGGAGAAGATAATCCTAAACCCT 120 |||||| | ||||||||| |||||||||||||||| ||||||||||| ||| |||||||| Sbjct 114 GATGATAATAATGATAAGAATCACACTAACGAAGAGCAGGAGAAGATCATCTTAAACCCT 173 Query 121 AATTTTGAGGATGGCCTGAACAACTGGACTGGAAGAGCGTGCAAGATTGTCTTACACGAG 180 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 174 AATTTTGAGGATGGCCTAAACAACTGGACTGGAAGAGCGTGCAAGATTGTCTTACACGAA 233 Query 181 TCCATGGACGGAGGGAAAATCGTACCACTCTCGGGAAAAGTTTTCGCAGCGGCAACACAG 240 ||||||||| | ||||| |||||||| ||||||||||||||||||||||| ||||| ||| Sbjct 234 TCCATGGACAGTGGGAAGATCGTACCGCTCTCGGGAAAAGTTTTCGCAGCAGCAACGCAG 293 Query 241 CGTAAAGACACATGGAATGGGATTCAACAGGAGATTTCAGGAAGATTTCA-GAGGAAGCG 299 ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| Sbjct 294 CGTAAAGACACATGGAATGGGATTCAACAAGAGATTTCAGGAAGA-TTCAGGAGGAAGCG 352 Query 300 TGTGTATGAAGTAACAGCAATGGTTCGAATATTTGGCAACAATGTTACGAA-TGCAACAG 358 |||||||||||||||||| | ||||||||||||||||||||||| || || |||||||| Sbjct 353 TGTGTATGAAGTAACAGCGGTAGTTCGAATATTTGGCAACAATGTCAC-AAGTGCAACAG 411 Query 359 TACAGGCGACTCTATGGGTCTTAAACGCAAATC-AACGTGAACAATACATAGTCATTGCC 417 |||| |||||||| ||||||||||||||||| | |||||||||||||||||||||||||| Sbjct 412 TACAAGCGACTCTCTGGGTCTTAAACGCAAA-CAAACGTGAACAATACATAGTCATTGCC 470 Query 418 AATGTGCAGGCGACTGATAAGAACTGGGTGGAGTTGAAGGGTAAATTTGTAATCCAGGGT 477 ||||| || || || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 471 AATGTTCAAGCAACAGATAAGAACTGGGTGGAGTTGAAGGGTAAATTTGTAATCCATGGT 530 Query 478 TCGCCATCGAGGGTGATACTATACCTTGAAGGTCCACCTTCAGGTTCTGACATTCTTCTC 537 ||||||||||| || |||||||||||||||||||||||| || | |||||||||||||| Sbjct 531 TCGCCATCGAGAGTAATACTATACCTTGAAGGTCCACCTCCACGAGCTGACATTCTTCTC 590 Query 538 AACAGTTTAGTTGTTAAACATGCTAAAAGGAATCGTCCATCGCCTCCTCCTTTCTATGAG 597 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct 591 AACAGTTTAGTTGTTCAACATGCTAAAAGGAATCGTCCATCGCCTCCTCCTTTCTACGAG 650 Query 598 AATCCCGGTTTCGGAGTCAATATAGTCGAAAACAGTGAAGTGGTAAACGGGGCAACCCAA 657 ||||| ||||||||||||||||||||||||||||||||||| || | |||| ||| || Sbjct 651 AATCCTGGTTTCGGAGTCAATATAGTCGAAAACAGTGAAGTTTTAGATGGGGGAACTAAA 710 Query 658 CCATGGTTCACCCTAGGAAACTGCAAGTTGAGTGTTGGACAAGGCGCTCCTCGCACTCTG 717 ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 711 CCATGGTTCACTCTAGGGAACTGCAAGTTGAGTGTTGGACAAGGCGCTCCGCGCACTCTG 770 Query 718 CCCCCAATGGCGAGAGACACGCTCGGTCCTCGCAAACCTCTTGGCGGAAGCTACATCCTC 777 || |||||||||||||||||||| ||||||| ||||||||| || |||| ||||||| | Sbjct 771 CCTCCAATGGCGAGAGACACGCTAGGTCCTCACAAACCTCTAGGTGGAAACTACATCGTT 830 Query 778 GTGACTAACAGAACGCAGACTTGGATGGGTCCGGCTCAGATGATAACCGATAAAATCAAA 837 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 831 GTGACTAACAGAACGCAGACTTGGATGGGTCCTGCTCAGATGATAACCGATAAAATCAAA 890 Query 838 CTCTTCTTGACATATCAAGTTTCAGCGTGGGTCAAAATTGGTGTGGGAGTGAGTGGTAGT 897 |||||||||||||||||| | ||||| |||||||| ||||||||||||| ||||||||| Sbjct 891 CTCTTCTTGACATATCAAATCTCAGCTTGGGTCAAGCTTGGTGTGGGAGTAAGTGGTAGT 950 Query 898 AGTATGAGTCCTCAAAATGTGAACATTGCACTTAGCGTCGATAACCAATGGGTCAATGGA 957 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 951 AGTATGAGTCCTCAGAATGTGAACATTGCACTTAGCGTCGATAACCAATGGGTCAACGGA 1010 Query 958 GGACAAGTCGAGGCCACCCTTGGTGATACATGGCATGAAATCGGCGGAACCTTTAGGCTT 1017 ||||||||||||| ||| |||||||||||||||||||||| | |||| | |||||||| Sbjct 1011 GGACAAGTCGAGGTCACAGTTGGTGATACATGGCATGAAATAGCCGGATCTTTTAGGCTA 1070 Query 1018 GAGAAGCAGCCACAAAACGTTATGGTTTACGTTCAAGGTCCTGCAGCTGGTATCGATTTG 1077 ||||| ||||||||||||||||||||||||||||||||||||| |||||| || |||||| Sbjct 1071 GAGAAACAGCCACAAAACGTTATGGTTTACGTTCAAGGTCCTGGAGCTGGCATTGATTTG 1130 Query 1078 ATGATCGCGGGACTGCAGATTTTTCCCGTGGATCGTCGAGACCGTGTCAGATGTCTCAAA 1137 |||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 1131 ATGATCGCGGCTCTGCAGATTTTCCCCGTGGATCGTCGAGAACGTGTCAGATGTCTCAAA 1190 Query 1138 AGACAAGTTGATCAGGTACGTAAGCGCGACATTGTCTTGAAATTCTCCGGACT--A-GAC 1194 |||||||||||| ||||||||||||||||||| || ||||||||||| ||||| | ||| Sbjct 1191 AGACAAGTTGATGAGGTACGTAAGCGCGACATCGTGTTGAAATTCTCAGGACTAAACGAC 1250 Query 1195 GAGGACTCCTCCGATTTGTTTCCTTACATAGTGAAGGTTAAACAAACATACAACAGTTTC 1254 || || |||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 1251 GACGAATCCTTTGATTTGTTTCCTTACATAGTGAAAGTGAAACAAACATACAACAGTTTC 1310 Query 1255 CCTGTAGGAACATGCATTAACAGAACAGACATAGACAATGAAGACTTTGTAGATTTCTTC 1314 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1311 CCAGTAGGAACATGCATCAACAGAACAGACATAGACAATGAAGACTTTGTAGATTTCTTC 1370 Query 1315 ACAAAGAACTTCAATTGGGCAGTGTTCGGAAACGAGCTTAAATGGTACTCAACAGAAGCC 1374 ||||||||||| || ||||||||||||||||||||||| ||||||||| | |||||||| Sbjct 1371 ACAAAGAACTTTAACTGGGCAGTGTTCGGAAACGAGCTCAAATGGTACGCGACAGAAGCG 1430 Query 1375 GAACGAGGAAAGGTAAATTACCAAGACGCAGACGACATGTTAGATCTCTGCATTGGTAAC 1434 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1431 GAACGTGGAAAGGTAAATTACCAAGACGCAGACGACATGTTAGATCTCTGCATTGGCAAC 1490 Query 1435 AACATAAACGTTAGAGGACATTGCATCTTCTGGGAAGTTGAATCCACTGTTCAGCCATGG 1494 ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct 1491 AACATAAACGTTAGAGGACATTGTATCTTCTGGGAAGTTGAATCCACAGTTCAGCCATGG 1550 Query 1495 GTTCGGCAGCTTAACAAAACCGATCTTATGAACGCGGTCCAAAGGCGTCTCACGGATCTT 1554 ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 1551 GTTCGCCAGCTTAACAAAACCGATCTTATGAACGCGGTACAAAAGCGTCTCACGGATCTT 1610 Query 1555 CTGACACGATACAAAGGTAAATTCAAGCACTACGATGTCAACAACGAGATGCTTCATGGT 1614 |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1611 TTGACGCGGTACAAAGGTAAATTCAAGCACTATGATGTCAACAACGAGATGCTTCATGGT 1670 Query 1615 TCTTTCTATCAAGACAAACTTGGAAAAGGTGTAAGAGCACTTATGTTCAACATTGCACAC 1674 |||||||||||||| | |||||||||||||||||||||||| |||||||| |||||||| Sbjct 1671 TCTTTCTATCAAGATAGACTTGGAAAAGGTGTAAGAGCACTCATGTTCAATATTGCACAT 1730 Query 1675 AAGCTTGATCCATCTCCTCTGCTTTTCGTAAACGATTATCATGTTGAAGACGGGGATGAC 1734 |||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||| Sbjct 1731 AAGCTTGATCCATCTCCTTTGCTTTTCGTTAACGATTATCATGTTGAGGACGGGGATGAC 1790 Query 1735 ACACGTTCGTCCCCCGAGAAGTATATAAAACTTGTTCTTGATTTGGAAGCGCAAGGAGCA 1794 | |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 1791 CCGCGTTCGTCTCCCGAGAAGTATATAAAACTTGTACTTGATTTGGAAGCTCAAGGAGCA 1850 Query 1795 A-TAGTAGGAGGGATTGGGATCCAAGGACATATAGATAGCCCTGTTGGAGCTATTGTTTG 1853 | | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1851 ACT-GTAGGAGGGATTGGGATCCAAGGACATATAGATAGTCCTGTTGGAGCTATTGTTTG 1909 Query 1854 CTCTGCTCTTGATAAGCTCTCTGTTCTTGGTCGTCCCATTTGGTTCACAGAGCTTGATGT 1913 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1910 TTCTGCTCTTGATATGCTCTCTGTTCTTGGTCGTCCCATTTGGTTCACAGAGCTTGATGT 1969 Query 1914 CTCTTCGAGTAATGAATATGTTAGAGGAGAAGATCTTGAAGTTATGTTGTGGGAAGCATT 1973 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 1970 CTCTTCGAGTAATGAATATGTTAGGGGAGAGGATCTTGAAGTTATGTTGTGGGAAGCATT 2029 Query 1974 TGCCCACCCTGCAGTTGAAGGAATAATGCTATGGGGTTTCTGGGAACTATCTATGAGTAG 2033 ||| |||||| ||||||||||||||||| ||||||| |||||||| |||||||||||||| Sbjct 2030 TGCTCACCCTTCAGTTGAAGGAATAATGTTATGGGGGTTCTGGGAGCTATCTATGAGTAG 2089 Query 2034 AGAGAACGCGAATTTGGTGGAGGGAGAAGGAGAAGTAAACGAAGCCGGGAAAAGATTTCT 2093 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| | Sbjct 2090 AGAGAACGCGAATCTGGTGGAGGGAGAAGGAGAAGTAAACGAAGCCGGAAAAAGATTT-T 2148 Query 2094 T-GAGGTGAAAGAAGAATGGTTATCTCATGCATATGGGATCATTAATGATGAATCAGAGT 2152 | ||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 2149 TAGAGGTGAAACAAGAATGGTTATCTCATGCATATGGGATCATCAATGATGAGTCAGAGT 2208 Query 2153 TCACATTCAAAGGCTATCATGGGACTTACGCCGTTGAAGTTTGTACTCCGGCTGGGATTG 2212 ||||||||| |||||| ||||||||||| ||||| ||| |||||||||| |||||||||| Sbjct 2209 TCACATTCAGAGGCTACCATGGGACTTATGCCGTCGAAATTTGTACTCCAGCTGGGATTG 2268 Query 2213 TTCTCAAAACGTTCGTTGTCGACAAAGGAGACACTCCACTTATTATATCCATTGATCTCT 2272 |||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct 2269 TTCTCAAAACGTTCGTTGTCGAAAAAGGAGACACTCCACTTGTTATCTCCATTGATCTCT 2328 Query 2273 CTTGTTTGTGATGTTTTTGT 2292 ||| |||||||||||| ||| Sbjct 2329 CTTCTTTGTGATGTTTGTGT 2348 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 115260451320 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5