BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489733
Length=2999
Score E
Sequences producing significant alignments: (Bits) Value
AT4G08180.1 | Symbols: ORP1C | OSBP(oxysterol binding protein)-... 4573 0.0
AT2G31020.1 | Symbols: ORP1A | OSBP(oxysterol binding protein)-... 1107 0.0
AT2G31030.1 | Symbols: ORP1B | OSBP(oxysterol binding protein)-... 974 0.0
> AT4G08180.1 | Symbols: ORP1C | OSBP(oxysterol binding protein)-related
protein 1C | chr4:5169484-5173662 FORWARD LENGTH=2990
Length=2990
Score = 4573 bits (2476), Expect = 0.0
Identities = 2845/3016 (94%), Gaps = 54/3016 (2%)
Strand=Plus/Plus
Query 1 aaaaataaaaaaGCTTTGGCCTCTCCGGTGACTCTT-CTTCTTCTGCTACCGAActtttc 59
||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 12 AAAAAAAAAAAAACTTTGGCCTCTCCGGTGACTCTTCCTTCTTCTGCTACCGAACTTTTC 71
Query 60 gctttcttctctgaccaa---ttttcaacaacctctcttcttcttc--tttctcaattct 114
|||| ||||||||||||| |||||||||||||||||||||| | ||||| ||||
Sbjct 72 GCTTCCTTCTCTGACCAATTTTTTTCAACAACCTCTCTTCTTCAACAAATTCTC--TTCT 129
Query 115 ctcaatcct-caaatcctctctGCCATGAACGCTACTTTCTTCCTCCTCTCCACCACCGT 173
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130 C-AAATCCTCCAAATCCTCTCTGCCATGAACGCTACTTTCTTCCTCCTCTCCACCACCGT 188
Query 174 GAACCACCG-CACAATCATCGGATCCAACGGAATCGATTTCTCATCTTAGTCGTCTCTCA 232
|||||| |||||||| ||||| |||||| |||||||||||||||| | |
Sbjct 189 -CTCCACCGTCACAATCACCGGATTCAACGGTCTCGATTTCTCATCTTA---G-----AA 239
Query 233 CCACATGCATCCCTTCTGTTGCGTTACCACTGTCTCCGATCACTCTCCTTCGATGCCTCC 292
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 240 CCACATGCATCCCTTCTGTTGCGTTACAACTGTCTCCGATCACTCTCCTTCGATGCCTCC 299
Query 293 TTTACCGGAACCACAACCGCCTCTACCGATACACGCCGCTGCTTCCTCCGCAACGCCTTT 352
||||| ||||||||||||||||||||| | | || | |||| || |||
Sbjct 300 GTTACCTGAACCACAACCGCCTCTACCG--A-A---------TTACGCCGC--CG-ATTT 344
Query 353 TGGTTCCGCGAGATCCGAGCCGATTATTTCTCGATCTGCTTCTCAGAGTTATAATCATCA 412
|||||| ||||||||||| |||||||| |||||||||||||||| |||||| | ||||
Sbjct 345 TGGTTCGGCGAGATCCGAACCGATTATAACTCGATCTGCTTCTCAAAGTTAT-A--ATCA 401
Query 413 TTCAGGTCAATTGAATAACAATCAGAATCTTATTCATAGTCTTTCGTTT-A--ATCACCA 469
|||||||||||| ||| || | ||||||||||||||||| |||||| | |||||||
Sbjct 402 TTCAGGTCAATTCAAT---AA-C--AATCTTATTCATAGTCTCTCGTTTAATCATCACCA 455
Query 470 GAGTGATGTCGCCAATCGATTGGGGCAACGCGTTTTAGCTTTGCCGGCGGCGGTTAGAGA 529
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 456 GAGTGATGTAACGGATCGATTGGGGCAACGCGTTTTAGCTTTGCCGGCGGCGGTTAGAGA 515
Query 530 ACCTCCGGTTGATGTTAAGATTAACGATATCGTTGGGAATGGAATTGCTGGGATTTTGTA 589
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 516 ACCACCGGTTGATGTTAAGATTAACGATATCGTTGGGAATGGAATTGCTGGGATTTTGTA 575
Query 590 TAAGTGGGTGAATTATGGTAGAGGATGGAGACCTAGGTGGTTTGTTTTGCAAGATGGTGT 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 576 TAAGTGGGTGAATTATGGTAGAGGATGGAGACCTAGGTGGTTTGTTTTGCAAGATGGTGT 635
Query 650 GCTTTCGTATTATAAGATTCATGGACCTGATAAGATCTTTGTTAGTCCTGAAACTGAAAA 709
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 636 TCTTTCTTATTATAAGATTCATGGACCTGATAAGATCTTTGTTAGTCCTGAAACTGAGAA 695
Query 710 AGGATCTAAAGTGATTGGAGATGAGTCTGCTCGTATGATCTCTAGGCATCATCGCCGTGG 769
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 696 AGGATCTAAAGTCATTGGAGATGAGTCTGCTCGTATGATCTCTAGGCATAATCGCCGTGG 755
Query 770 CGGAAGCAGTAGTAGTTGCCAGCTTCGTCGCAAGCCATTTGGAGAAGTCCATCTTAAGGT 829
||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 756 CGGTAGCAGTAGTAGTTGCCAGCTTCGTCGCAAGCCATTCGGAGAAGTCCATCTCAAGGT 815
Query 830 TTCTTCAGTTAGGGAGAGTAGATCAGATGATAAGAGGTTTTCCATTTTTACTGGCACCAA 889
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 816 TTCTTCAGTTAGAGAGAGTAGATCAGATGATAAGAGGTTTTCCATTTTTACTGGTACCAA 875
Query 890 GAGGCTTCACTTGCGTGCAGAGACGCGAGAGGACCGAACGACTTGGGTTGAGGCTTTACA 949
||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 876 GAGGCTTCATTTGCGTGCGGAGACGCGAGAGGACCGAACAACTTGGGTTGAGGCTTTACA 935
Query 950 AGCTGTTAAAGATATGTTTCCAAGGATGTCTAATAGTGAATTGATGGCTCCGACTAACAA 1009
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 936 AGCTGTTAAAGATATGTTTCCAAGGATGTCTAATAGTGAGTTGATGGCTCCGACTAACAA 995
Query 1010 TTTGGCCATGTCGACGGAGAAGCTTAGGCTAAGGTTGATTGAGGAAGGAGTTAGTGAGTT 1069
|||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||||||||
Sbjct 996 TTTGGCTATGTCGACGGAGAAGATTAGGTTAAGGTTGATTGAGGAAGGAGTAAGTGAGTT 1055
Query 1070 AGCTATTCAGGACTGTGAGCAAATTATGAAGTCTGAGTTCTCAGCACTTCAGAGCCAGCT 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1056 AGCTATTCAGGACTGTGAGCAAATTATGAAGTCTGAGTTCTCAGCACTTCAGAGCCAGCT 1115
Query 1130 GGTGCTTCTCAAGCAGAAGCAGTGGCTTCTCATTGATACTCTTAGGCAGTTGGAGACAGA 1189
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1116 GGTGCTTCTTAAACAGAAGCAGTGGCTTCTCATTGATACTCTTAGGCAGTTGGAGACAGA 1175
Query 1190 AAAGGTAGATCTGGAGAACACAGTTGTAGATGAGAGTCAAAGACAGGCTGATAATGGATG 1249
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1176 AAAGGTAGATCTTGAGAACACAGTTGTAGATGAAAGTCAAAGACAGGCTGATAATGGATG 1235
Query 1250 TTCCAGTGAATTAAGACATGAGAAGTTCAGTGAAGGGACTGCCACTGAATCTGATGATGA 1309
|||| ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1236 TTCCGGTGAATTAAGACACGAGAAGTTCAGTGAAGGCACTGCCACTGAGTCTGATGATGA 1295
Query 1310 TAATGAACGCGGTGATGCCGCCGAGGAGGAATTTGATGAGGAAGAAAATACCTTTTTTGA 1369
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1296 TAATGAACGAGGTGATGCCGCCGAGGAGGAATTTGATGAGGAAGAAAATACCTTTTTTGA 1355
Query 1370 TACACGTGATTTTCTTTCTTCAAGTTCTTTCAAGAGTAGTGGTTCTGGTTTTCGTACTTC 1429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1356 TACACGTGATTTTCTTTCTTCAAGTTCTTTCAAGAGTAGTGGTTCTGGTTTTCGTACATC 1415
Query 1430 ATCATTTTCTTCCGATGAAGATGGCTTCGAGTCAGAAGATGATATTGATCCTTCCATCAA 1489
||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 1416 ATCATTTTCGTCCGATGAAGATGGCTTTGAGTCTGAAGATGATATTGATCCTTCCATCAA 1475
Query 1490 GTCTATTGGATGCAACTATCCTCGCGTCAAAAGGAGGAAGAATTTACCTGATCCGGTTGA 1549
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1476 GTCTATTGGATGCAATTATCCTCGCGTCAAAAGGAGGAAGAATTTACCTGATCCGGTTGA 1535
Query 1550 AAAAGAGAAAAGTGTTAGCCTTTGGTCAATGATCAAAGACAATATAGGCAAGGATCTAAC 1609
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1536 AAAAGAGAAAAGTGTTAGCCTTTGGTCAATGATCAAAGACAATATAGGGAAGGATCTCAC 1595
Query 1610 AAAAGTCTGTCTTCCTGTTTACTTCAACGAGCCACTATCTTCTTTACAGAAATGTTTTGA 1669
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1596 AAAAGTCTGTCTTCCTGTTTACTTCAACGAGCCACTTTCTTCTTTACAGAAATGTTTTGA 1655
Query 1670 GGATTTGGAATATTCATACCTTCTTGACCGTGCATTTGAATATGGCAAAAGGGGAAATAG 1729
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1656 GGATTTGGAATATTCGTACCTTCTTGACCGAGCATTTGAATATGGCAAAAGGGGAAATAG 1715
Query 1730 CCTCATGAGGATTCTCAATGTAGCTGCTTTTGCTGTATCTGGGTATGCATCAACCGAAGG 1789
|||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1716 CCTCATGAGGATACTTAATGTAGCTGCTTTTGCTGTATCTGGGTATGCATCAACTGAAGG 1775
Query 1790 AAGAATCTGCAAACCTTTTAATCCATTGTTAGGTGAAACATACGAGGCAGACTATCCAGA 1849
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1776 AAGAATTTGCAAACCTTTTAATCCATTGTTAGGTGAAACATACGAGGCAGACTATCCAGA 1835
Query 1850 CAAAGGCCTTCGAtttttttCAGAAAAGGTCAGTCATCATCCTATGGTTGTCGCATGCCA 1909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1836 CAAAGGCCTTCGATTTTTTTCAGAAAAGGTCAGTCATCATCCTATGGTTGTCGCATGCCA 1895
Query 1910 TTGTGATGGCACGGGATGGAAATTCTGGGGAGACAGCAATCTTAGGAGCAAATTCTGGGG 1969
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1896 TTGTGATGGCACCGGATGGAAATTCTGGGGAGACAGCAATCTTAGGAGCAAATTCTGGGG 1955
Query 1970 TCGATCTATTCAGCTTGATCCTGTTGGTGTATTGACTTTGCAATTTGATGATGGAGAAAT 2029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1956 TCGATCTATTCAGCTTGATCCTGTTGGTGTATTGACTTTGCAATTTGATGATGGAGAAAT 2015
Query 2030 CCTTCAGTGGAGTAAGGTGACTACATCAATATACAATCTCATACTTGGTAAACTGTACTG 2089
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2016 CCTTCAGTGGAGTAAGGTGACTACATCAATATACAATCTCATACTTGGTAAACTATACTG 2075
Query 2090 TGATCACTACGGTACAATGCGTATTGAGGGCAGTGCTGAATACTCATGTAAACTTAAATT 2149
||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 2076 TGATCACTATGGTACTATGCGTATTGAGGGTAGTGCAGAATACTCATGTAAACTTAAATT 2135
Query 2150 CAAGGAGCAGTCCATCATAGACCGAAATCCTCATCAGGTTCATGGTATAGTTCAAGACAA 2209
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2136 CAAGGAGCAGTCCATCATAGACCGAAATCCTCATCAGGTTCATGGTATAGTTCAAAACAA 2195
Query 2210 GAGTGGGAAGACAGTGGCAACGATGTTTGGGAAATGGGATGAGAGCATGCACTTTGTGAC 2269
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 2196 GAGTGGGAAGACAGTGGCAACTATGTTTGGGAAATGGGATGAGAGCATACACTTTGTGAC 2255
Query 2270 GGGTGATTGTTCTGGGAAGGGGAAACAGAGTGAAGCTATGTCAGGAGCTCAACTTCTTTG 2329
||||||||||||||| || |||||| |||||||| ||||||||||||||||||||| ||
Sbjct 2256 GGGTGATTGTTCTGGAAAAGGGAAATTGAGTGAAGATATGTCAGGAGCTCAACTTCTCTG 2315
Query 2330 GAAACGGAGCAAACCTCCTGGAAACGCAACAAAGTATAATCTAACACGTTTTGCAATCAC 2389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2316 GAAACGGAGCAAACCTCCTGGAAACGCAACAAAGTATAATCTAACACGTTTTGCAATCAC 2375
Query 2390 GTTGAATGAGCTTACGCCTGGGCTTAAGGAGAGCCTTCCACCAACGGATTCAAGGCTGCG 2449
|||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||
Sbjct 2376 ATTGAATGAGCTTACACCTGGGCTTAAGGAGAGGCTGCCACCAACGGATTCAAGGCTGCG 2435
Query 2450 ACCGGACCAGAGGTATCTCGAGAACGGAGAGTTTGAAATGGCCAACACAGAGAAGTTGCG 2509
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2436 ACCGGACCAGAGGTATCTCGAGAACGGAGAGTTTGAAATGGCCAACACAGAAAAGTTGCG 2495
Query 2510 GCTGGAACAGCGACAACGTCAGGCTAGGAAGATGCAGGAGAGAGGATGGAAGCCGAGGTG 2569
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2496 GCTGGAACAGCGACAACGTCAGGCGAGGAAGATGCAGGAGAGAGGATGGAAGCCGAGGTG 2555
Query 2570 GTTCATGAAGGAGAAAGGTAGCGAGTCATACCGATACAAAGGAGGTTACTGGGAAGCCCG 2629
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 2556 GTTCATGAAGGAGAAAGGAAGCGAGTCTTACCGATACAAAGGAGGTTACTGGGAAGCCCG 2615
Query 2630 AGAGGATGGATTATGGGTAGACTGTCCAGATATCTTCGGCCATATCGATTCCGATCAACA 2689
||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 2616 AGAGGATGGATCATGGGTAGACTGTCCAGACATCTTCGGCCACATCGATTCCGATCAACA 2675
Query 2690 AATGATAGAGTAAAGA-GAAATTATAAGCCACATCGATTCTTAAATCACGAAGTATTAAA 2748
|||||||||||||| | ||||||| | ||||||||||||| |||||||||||||||||
Sbjct 2676 AATGATAGAGTAAA-ACGAAATTACCATTCACATCGATTCTTGAATCACGAAGTATTAAA 2734
Query 2749 TTCCTCATATCATCCTTTCTAATTACGTTTTGGTTTCTTCTATTATTTTCCttttttttt 2808
|||||| |||| ||||||||||||||||||| ||||||||||||||||| ||| |||||
Sbjct 2735 TTCCTCCTATCTTCCTTTCTAATTACGTTTTCGTTTCTTCTATTATTTTTCTTCCTTTTT 2794
Query 2809 CATCTCATTATTCTTTACTCGCCATTTCACCTTACAGGACATTTACCTTTAGTCt-tttt 2867
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||
Sbjct 2795 CATCTCATTATTCTTTACTCGCCATTTCACGTTACAGGACCTTTACCTTTAGTCTCTTTT 2854
Query 2868 tttCTTTTCTT-T--GTATATCATGAAATAGTT-CGCCTCATACGCAAATTTGTCCAATC 2923
||||||||||| | |||||||||||||||||| ||| |||||| |||||||||||||||
Sbjct 2855 TTTCTTTTCTTCTTTGTATATCATGAAATAGTTTCGCGTCATACCCAAATTTGTCCAATC 2914
Query 2924 CTTGTAAGTGGAAGAATGTGCTCTTAATCATACATGGCTATATTGAATAAGCAAAAGGAA 2983
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2915 CTTGTAAGTGGAAGAATGTGCTCCAAATCATACATGGCTATATTGAATAAGCAAAAGGAA 2974
Query 2984 GAAAGTTACATATGTG 2999
||||||||| ||||||
Sbjct 2975 GAAAGTTACTTATGTG 2990
> AT2G31020.1 | Symbols: ORP1A | OSBP(oxysterol binding protein)-related
protein 1A | chr2:13201668-13204821 FORWARD LENGTH=2422
Length=2422
Score = 1107 bits (599), Expect = 0.0
Identities = 1069/1290 (83%), Gaps = 56/1290 (4%)
Strand=Plus/Plus
Query 1368 GATACACGTGATTTTCTTTCTTCAAGTTCTTTCAAGAGTAGTGGTTCTGGTTTTCGTACT 1427
|||||| |||| | ||||||||||||||| ||||| |||| ||| || | |||||| ||
Sbjct 964 GATACATGTGACTCTCTTTCTTCAAGTTCATTCAAAAGTATTGGATCCGTTTTTCGCACA 1023
Query 1428 TCATCATTTTCTTCCGATGAAGATGG-CTT-C----------GAGTC--AGAA-GATGAT 1472
|||||||| ||||| ||||| ||||| ||| | ||||| |||| ||||||
Sbjct 1024 TCATCATTCTCTTCAGATGATGATGGACTTACTAATGGTTTTGAGTCAGAGAATGATGAT 1083
Query 1473 ATTGATCCTTCCATCAAGTCTATTGGATGCAACTATCCTCGCGTCAAAAGGA-GGAAGAA 1531
|||||||||| |||||| ||||||||| |||||||| | ||||||| || | |||||
Sbjct 1084 GTTGATCCTTCTATCAAGACTATTGGATTTAACTATCCACATGTCAAAA-GACGAAAGAA 1142
Query 1532 TTTACCTGATCCGGTTGAAAAAGAGAAAAGTGTTAGCCTTTGGTCAATGATCAAAGACAA 1591
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1143 GTTACCTGATCCGGTTGAAAAAGAGAAAAGTGTTAGCCTTTGGTCAATGATCAAAGACAA 1202
Query 1592 TATAGGCAAGGATCTAACAAAAGTCTGTCTTCCTGTTTACTTCAACGAGCCACTATCTTC 1651
|| ||||||||||| |||||||| ||||||||||| |||||||| ||||| |||||||
Sbjct 1203 CATTGGCAAGGATCTCACAAAAGTTTGTCTTCCTGTCTACTTCAATGAGCCTTTATCTTC 1262
Query 1652 TTTACAGAAATGTTTTGAGGATTTGGAATATTCATACCTTCTTGACCGTGCATT-TGAAT 1710
| |||| ||||| ||||| |||||||| |||||||| |||||||| | || || |||||
Sbjct 1263 TCTACAAAAATGCTTTGAAGATTTGGAGTATTCATATCTTCTTGATCAAGC-TTCTGAAT 1321
Query 1711 ATGGCAAA-AGGGGAAATAGCCTCATGAGGATTCTCAATGTAGCTGCTTTTGCTGTATCT 1769
|| ||| ||||| |||| ||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 1322 GGGG-AAAGAGGGGCAATAACCTCATGAGGATTCTGAATGTAGCTGCATTTGCCGTATCT 1380
Query 1770 GGGTATGCATCAACCGAAGGAAGAATCTGCAAACCTTTTAATCCATTGTTAGGTGAAACA 1829
|| ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct 1381 GGTTATGCATCAACTGAAGGAAGAATTTGCAAACCTTTTAATCCAATGTTAGGTGAAACA 1440
Query 1830 TACGAGGCAGACTATCCAGACAAAGGCCTTCGAtttttttCAGAAAAGGTCAGTCATCAT 1889
|| ||||| |||||||| || ||||||||||||||||| || |||||||| |||||||||
Sbjct 1441 TATGAGGCTGACTATCCCGATAAAGGCCTTCGATTTTTCTCGGAAAAGGTGAGTCATCAT 1500
Query 1890 CCTATGGTTGTCGCATGCCATTGTGATGGCACGGGATGGAAATTCTGGGGAGACAGCAAT 1949
|||||| |||| ||||| |||||||||||||| ||||||||||| |||||||| |||||
Sbjct 1501 CCTATGATTGTGGCATGTCATTGTGATGGCACCGGATGGAAATTTTGGGGAGATAGCAA- 1559
Query 1950 CTTAGGA-GCAAATTCTGGGGTCGATCTATTCAGCTTGATCCTGTTGGTGTATTGACTTT 2008
|||| | ||||||| ||||||||||| ||||| ||||||||| ||||| | ||||||||
Sbjct 1560 CTTAAAAAGCAAATTTTGGGGTCGATCAATTCAACTTGATCCTATTGGTTTGTTGACTTT 1619
Query 2009 GCAATTTGATGATGGAGAAATCCTTCAGTGGAGTAAGGTGACTACATCAATATACAATCT 2068
||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||
Sbjct 1620 GCAATTTGATGATGGTGAAATTGTGCAATGGAGTAAGGTGACTACATCAATATACAATCT 1679
Query 2069 CATACTTGGTAAACTGTACTGTGATCACTACGGTACAATGC-GTATTGAGGGCAGTGCTG 2127
||||||||||||| |||| |||||||||||||| |||||| | ||||| |||| | ||
Sbjct 1680 CATACTTGGTAAATTGTATTGTGATCACTACGGGACAATGAAG-ATTGAAGGCAACGGTG 1738
Query 2128 AATACTCATGTAAACTTAAATTCAAGGAGCAGTCCATCATAGACCGAAATCCTCATCAGG 2187
|||| ||||||||||||||||||||||| ||||| || || || ||||||| ||||| |
Sbjct 1739 AATATTCATGTAAACTTAAATTCAAGGAACAGTCGATGATCGATAGAAATCCGCATCAAG 1798
Query 2188 TTCATGGTATAGTTCAAGACAAGAGTGGGAAGACAGTGGCAACGATGTTTGGGAAATGGG 2247
|||| |||||||| ||||||||| ||| || |||||||| | | ||||||| |||||||
Sbjct 1799 TTCAAGGTATAGTAGAAGACAAGAATGGAAAAACAGTGGCTAGGTTGTTTGGAAAATGGG 1858
Query 2248 ATGAGAGCATGCACTTTGTGACGGGTGATTGTTCTGGGAAGGGGAAACAGAGTGAAGCTA 2307
||||||| || |||| ||||| || |||| | |||| ||| | ||||| |
Sbjct 1859 ATGAGAGTATACACTATGTGATGGTTGAT----C----AAGG--AAA--G-GTGAA--T- 1902
Query 2308 TGTCAGGAGCTCAACTTCTTTGGAAACGGAGCAAACCTCCTGGAAACGCAACAAAGTATA 2367
| | | | || ||||| |||||||| | ||||| || | |||| | ||||||||||
Sbjct 1903 -G--A--ATCCCATCTTCTGTGGAAACGAAACAAACAGCCCGAAAACCCGACAAAGTATA 1957
Query 2368 ATCTAACACGTTTTGCAATCACGTTGAATGAGCTTACGCCTGGGCTTAA-GGAGA-GCCT 2425
|||||||||| |||| ||||| || || ||||| |||||||| |||| ||||| | |
Sbjct 1958 ATCTAACACGGTTTGGGATCACATTAAACGAGCTCACGCCTGGT-TTAAAGGAGAAG--T 2014
Query 2426 T-CCACCAACGGATTCAAGGCTGCGACCGGACCAGAGGTATCTCGAGAACGGAGAGTTTG 2484
| |||||||| |||||||| || ||||||||||||||||| | ||||| ||||||| ||
Sbjct 2015 TGCCACCAACAGATTCAAGACTTAGACCGGACCAGAGGTATTTAGAGAAGGGAGAGTATG 2074
Query 2485 AAATGGCCAACACAGAGAAGTTGCGGCTGGAACAGCGACAACGTCAGGCTAG-GAAGATG 2543
|||||| ||| ||||||||||| || ||||||| ||||| | ||||| || || ||||
Sbjct 2075 AAATGGGAAACGCAGAGAAGTTGAGGTTGGAACAAAGACAAAGACAGGCGAGAGA-GATG 2133
Query 2544 CAGGAGAGAGGATGGAAGCCGAGGTGGTTCATGAAG-GAGAAAGGTAGCGAGTCATACCG 2602
|| |||||||| ||||| || | |||||| | ||| |||||||| || ||| | || |
Sbjct 2134 CAAGAGAGAGGTTGGAAACCAAAGTGGTTTA-GAAAAGAGAAAGGAAGTGAGACTTATAG 2192
Query 2603 ATACAAAGGAGGTTACTGGGAAGCCCGAGA 2632
||||| |||||||| |||||||| |||||
Sbjct 2193 ATACATTGGAGGTTATTGGGAAGCTCGAGA 2222
> AT2G31030.1 | Symbols: ORP1B | OSBP(oxysterol binding protein)-related
protein 1B | chr2:13206004-13207815 FORWARD LENGTH=1470
Length=1470
Score = 974 bits (527), Expect = 0.0
Identities = 980/1195 (82%), Gaps = 45/1195 (4%)
Strand=Plus/Plus
Query 1450 ATGGCTTCGAGTCAGAAGATGATATTGATCCTTCCATCAAGTCTATTGGATGCAACTATC 1509
||||||| |||||||| ||||| |||||||||| |||||| ||||||||| |||||||
Sbjct 260 ATGGCTTTGAGTCAGATGATGACGTTGATCCTTCTATCAAGACTATTGGATTTAACTATC 319
Query 1510 CTCGCGTCAAAAGGA-GGAAGAATTTACCTGATCCGGTTGAAAAAGAGAAAAGTGTTAGC 1568
||| ||||| | || | || || ||||||||||||||||||||||||||||||||||||
Sbjct 320 CTCATGTCAATA-GACGAAATAAATTACCTGATCCGGTTGAAAAAGAGAAAAGTGTTAGC 378
Query 1569 CTTTGGTCAATGATCAAAGACAATATAGGCAAGGATCTAACAAAAGTCTGTCTTCCTGTT 1628
||||||||||||||||||||||| || ||||||||||| || ||||| ||||||||||||
Sbjct 379 CTTTGGTCAATGATCAAAGACAACATTGGCAAGGATCTTACTAAAGTTTGTCTTCCTGTT 438
Query 1629 TACTTCAACGAGCCACTATCTTCTTTACAGAAATGTTTTGAGGATTTGGAATATTCATAC 1688
|||||||| ||||||||||| ||| |||| ||||| ||||| |||||||| ||||||||
Sbjct 439 TACTTCAATGAGCCACTATCCTCTCTACAAAAATGCTTTGAAGATTTGGAGTATTCATAT 498
Query 1689 CTTCTTGACCGTGCATT-TGAATATGGCAAAAGGGGAAATAGCCTCATGAGGATTCTCAA 1747
|||||||| | || || ||||| || |||||||| |||| ||| ||||||||| | ||
Sbjct 499 CTTCTTGATCAAGC-TTCTGAATGGGGAAAAAGGGGCAATAACCTTATGAGGATTTTGAA 557
Query 1748 TGTAGCTGCTTTTGCTGTATCTGGGTATGCATCAACCGAAGGAAGAATCTGCAAACCTTT 1807
||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||| ||
Sbjct 558 TGTAGCTGCATTTGCTGTATCTGGTTATGCATCAACTAAAGGAAGAATTTGCAAACCCTT 617
Query 1808 TAATCCATTGTTAGGTGAAACATACGAGGCAGACTATCCAGACAAAGGCCTTCGAttttt 1867
||||||| ||||||| |||||||||||||| || ||||| || |||||||||||||||||
Sbjct 618 TAATCCAATGTTAGGGGAAACATACGAGGCTGATTATCCCGATAAAGGCCTTCGATTTTT 677
Query 1868 ttCAGAAAAGGTCAGTCATCATCCTATGGTTGTCGCATGCCATTGTGATGGCACGGGATG 1927
|| |||||||| ||||||||||||||| |||| ||||| |||||||||||||| |||||
Sbjct 678 CTCGGAAAAGGTAAGTCATCATCCTATGATTGTGGCATGTCATTGTGATGGCACCGGATG 737
Query 1928 GAAATTCTGGGGAGACAGCAATCTTAGGA-GCAAATTCTGGGGTCGATCTATTCAGCTTG 1986
|||||| |||||||| |||||| ||| | ||||||| ||||||||||| |||||||| |
Sbjct 738 GAAATTTTGGGGAGATAGCAAT-TTAAAAAGCAAATTTTGGGGTCGATCAATTCAGCTCG 796
Query 1987 ATCCTGTTGGTGTATTGACTTTGCAATTTGATGATGGAGAAATCCTTCAGTGGAGTAAGG 2046
||||| | ||| | |||||||| |||||||||||||| ||||| | || ||||||||||
Sbjct 797 ATCCTATCGGTTTGTTGACTTTACAATTTGATGATGGTGAAATTGTGCAATGGAGTAAGG 856
Query 2047 TGACTACATCAATATACAATCTCATACTTGGTAAACTGTACTGTGATCACTACGGTACAA 2106
||||||||||||||||||||||||||||||||||| |||| |||||||| || || || |
Sbjct 857 TGACTACATCAATATACAATCTCATACTTGGTAAATTGTATTGTGATCATTATGGGACTA 916
Query 2107 TGC-GTATTGAGGGCAGTGCTGAATACTCATGTAAACTTAAATTCAAGGAGCAGTCCATC 2165
||| | ||||| || | | |||||||||||||||||||||||||||| | ||||| ||
Sbjct 917 TGCTG-ATTGAAGGTAACGGTGAATACTCATGTAAACTTAAATTCAAGAAACAGTCGATG 975
Query 2166 ATAGACCGAAATCCTCATCAGGTTCATGGTATAGTTCAAGACAAGAGTGGGAAGACAGTG 2225
|| || ||||||| ||||| ||||| |||||||| ||||||||| ||| || ||||||
Sbjct 976 ATGGATAGAAATCCGCATCAAGTTCAAGGTATAGTAGAAGACAAGAATGGAAAAACAGTG 1035
Query 2226 GC-AACGATGTTTGGGAAATGGGATGAGAGCATGCACTTTGTGACGGGTGATTGTTCTGG 2284
|| || | ||||||| |||||||||||||| ||| ||| ||||| || | | | |
Sbjct 1036 GCTAA-GTTGTTTGGAAAATGGGATGAGAGTATGTACTATGTGATGG-TCAAT---C--- 1087
Query 2285 GAAGGGGAAACAGAGTGAAGCTATGTCAGGAGCTCAACTTCTT-TGGAAACGGAGCAAAC 2343
|||| ||| ||| | | | | | | |||| ||| || |||||||| | |||||
Sbjct 1088 -AAGG--AAAG-GAG--A-G-T--G--A--ATCTCATCTT-TTGTGGAAACGAAACAAAC 1132
Query 2344 CTCCTGGAAA-CGCAACAAAGTATAATCTAACACGTTTTGCAATCACGTTGAATGAGCTT 2402
||| | |||| | | |||||||| ||||| ||||| |||| ||||| || || |||||
Sbjct 1133 CTC-TCGAAAACCCTACAAAGTACAATCTTACACGGTTTGGGATCACATTAAACGAGCTC 1191
Query 2403 ACGCCTGGGCTTAA-GGAGA-GCCTT-CCACCAACGGATTCAAGGCTGCGACCGGACCAG 2459
||||||| |||| ||| | | || |||||||| ||||| || || ||||||||||
Sbjct 1192 ACGCCTGAT-TTAAAGGAAATG--TTGCCACCAACAGATTCCAGACTTAGACCGGACCAA 1248
Query 2460 AGGTATCTCGAGAACGGAGAGTTTGAAATGGCCAACACAGAGAAGTTGCGGCTGGAACAG 2519
|||||| | || || |||||||||||||||| |||| |||||||||| || | |||||
Sbjct 1249 AGGTATTTGGAAAAAGGAGAGTTTGAAATGGGAAACAGAGAGAAGTTGAGGTTAGAACAA 1308
Query 2520 CGACAACGTCAGGCTAG-GAAGATGCAGGAGAGAGGATGGAAGCCGAGGTGGTTCA-TGA 2577
| ||| | ||||| || || || || |||||||| ||||| || | |||||| | | |
Sbjct 1309 AGGCAAAGACAGGCGAGAGA-GAAACAAGAGAGAGGCTGGAAACCAACGTGGTTTAGTAA 1367
Query 2578 AGGAGAAAGGTAGCGAGTCATACCGATACAAAGGAGGTTACTGGGAAGCCCGAGA 2632
|| ||||||| || ||| | || |||||| |||||||| ||||| || |||||
Sbjct 1368 AG-AGAAAGGAAGTGAGACTTATAGATACATTGGAGGTTATTGGGAGGCTCGAGA 1421
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 149096154596
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5