BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489756
Length=2766
Score E
Sequences producing significant alignments: (Bits) Value
AT4G08510.1 | Symbols: | unknown protein; LOCATED IN: chloropl... 3681 0.0
AT1G36990.1 | Symbols: | unknown protein; LOCATED IN: chloropl... 662 0.0
> AT4G08510.1 | Symbols: | unknown protein; LOCATED IN: chloroplast;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G36990.1); Has 888 Blast hits to 321 proteins
in 121 species: Archae - 0; Bacteria - 120; Metazoa - 86;
Fungi - 24; Plants - 79; Viruses - 0; Other Eukaryotes - 579
(source: NCBI BLink). | chr4:5410296-5413453 FORWARD LENGTH=2820
Length=2820
Score = 3681 bits (1993), Expect = 0.0
Identities = 2584/2849 (91%), Gaps = 122/2849 (4%)
Strand=Plus/Plus
Query 1 CCTTGAACAAGTTTTCTCAAAGAAACaaaaaaaaaaaaaaaaaaCATTTCGCCTCcttct 60
|||||||||||||||||| ||||||| ||||||||||||||||||||||||| | |
Sbjct 1 CCTTGAACAAGTTTTCTC---CAAACAAACCAAAAAAAAAAAAACATTTCGCCTCC-T-T 55
Query 61 cttcttcttcttctctaccagtctcttctctctcGCACCATCGCAAAAACCCTAA--TTT 118
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 56 C-TCTTCTTCTTCGCTACCAGTCTCTTCTCTCTCGCACCATCGCAAAAACCCTAATTTTT 114
Query 119 CTCTTCGATTTTCTCTTCTCACAAACCCTAATTG----TT--T-CCACCACTCGCTTTTT 171
|||||||||||||||||||||||||||||||||| || | |||||||||||||| |
Sbjct 115 CTCTTCGATTTTCTCTTCTCACAAACCCTAATTGTTTCTTCCTCCCACCACTCGCTTTCT 174
Query 172 CCTTCCATCGTTTGGGTTTGTT--TAAG-TT-TCTC----TT-TTGTTTGGGGAAGAAGC 222
||||||||||||||| ||| || |||| || |||| || |||||||||||||||||
Sbjct 175 CCTTCCATCGTTTGGTTTTTTTAATAAGTTTCTCTCTTTTTTCTTGTTTGGGGAAGAAGC 234
Query 223 CATTGTTTTCTTTGAGCGATTGAATCTATAAAA------C---TTCTTC-----T-T-TG 266
||||| ||||||| | ||||||||||||||||| | |||||| | | ||
Sbjct 235 CATTGGTTTCTTTAAACGATTGAATCTATAAAACTTCTTCTTTTTCTTCTGGGTTCTGTG 294
Query 267 TTCTTCGTCTCTTTCGTTGAACCCGTTGTTTCGATTTTCTTTGTTCTG-GGGA-A-ATTT 323
|||||||||||||||||||||||||||||||||||||||||| ||||| |||| | |||
Sbjct 295 TTCTTCGTCTCTTTCGTTGAACCCGTTGTTTCGATTTTCTTTCTTCTGAGGGAGATTTTT 354
Query 324 TTTCTGGTGATGCGTTGAAACGAATTCTGCCGTTGTTGTGTTGAATTCTAGGGCTAGTGA 383
|||||| ||||||||||| ||||||| |||||||||| |||||||||||||| ||||||
Sbjct 355 TTTCTGTTGATGCGTTGATACGAATTTTGCCGTTGTTTTGTTGAATTCTAGGAATAGTGA 414
Query 384 TTAGGTGATTAGGGTTTC-GGGTTAGTGACATCACTGTGAATTCAGGCTGGTTCCTTTAT 442
||||||| |||||||||| || |||||| | | | | ||||||| ||||| ||||
Sbjct 415 TTAGGTGGTTAGGGTTTCTGGTTTAGTG-C--C-C-----A-TCAGGCTAGTTCCCTTAT 464
Query 443 TGGTGGGTTTGGATGATGATGATTATGATGATCTTCTAGGTTGGTCTTAGAGTGTGTGTC 502
|||||| ||| | ||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 465 TGGTGGATTT--A-GATGATG---ATGATGATCTTCTAGGTTGGTTTTAGA--GTGTGTC 516
Query 503 TAAGCCATCTGTGGGAGAGATGGATGTGTAGAGGGTTTTTATCATCATTGAGACGATTCG 562
| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 517 TTAGCCATCTGTGTGAGAGATGGATGTGTAGAGGGTTTA-ATCATCATTGAGACGATTCG 575
Query 563 ATTCATTTGGTTTTGA---GA--TTGGATTTT-CTTCCCTGCCCTTTGTGGTGGTAGGTT 616
|||||||||||||||| || ||||||||| ||||||||||||||||||| ||||||
Sbjct 576 ATTCATTTGGTTTTGATTTGAGATTGGATTTTTCTTCCCTGCCCTTTGTGGTAGTAGGT- 634
Query 617 GATT-AGATGTTTAGGAAGAA----GAA---TTATTGAGAGTGAT-----T--TT-A-T- 658
|||| |||||||||||||||| ||| || ||||||||||| | || | |
Sbjct 635 GATTTAGATGTTTAGGAAGAATTAAGAAGAGTTCTTGAGAGTGATAGAGGTCATTGAATT 694
Query 659 ---CT--------GATGAAGTATAGCTTTCATAATGGAAAAACGCGGTGAACCCTCTTTA 707
|| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 695 GTTCTTTTTATCTGATGAAGTATAGCTTTCATAATGGAAAAACGCG---AACCCTCTTTA 751
Query 708 GTACCTGAATGGTTGAGAAGTTCAGGACATGGTTCTGGTGTTGGGAGTTCAAAT-CAGCT 766
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 752 GTTCCTGAATGGTTGAGAAGTTCAGGACATGGTTCTGGTGTTGGGAGTTCAAATTCT-CT 810
Query 767 TTTATCAT-CTTTACGTAATAGCAAGAATAGGAATTCTAGGAGCAGAAGTGATGTTGATT 825
|| | || |||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct 811 TTCAG-ATTCTTTACGTAATAGCAAGAATAGGAATGCTAGGAGCAGAAGTGATGCTGATT 869
Query 826 CAGTTCGGTCTCCTTTTCTCGATCGGTCTTCTTCTACCAATACAAGGAGGGGATCTAGTA 885
||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct 870 CAGTTGGGTCTCCTTTTCTCGACCGGTCTTCTTCCACCAATACGAGGAGGGGATCTAGTA 929
Query 886 ATGGTTCTACCAAACATGCATATAGTAGTTTCAACTTCAATAGGAGCAACAGAGATAAAG 945
|||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 930 ATGGGTCTACAAAACATGCATATAGTAGTTTCAACTTTAATAGGAGCAACAGAGATAAAG 989
Query 946 ATCGGAGCAGGGAGAAAGATAGGTTGAGCTACATGGATCCATGGGACCATGACACTTCTC 1005
|||||||||||||||| |||||| ||||||||||||||||||||||| |||| | ||||
Sbjct 990 ATCGGAGCAGGGAGAAGGATAGGATGAGCTACATGGATCCATGGGACAATGATAGTTCTA 1049
Query 1006 TGCCTTTTGGAACCATCGTGATTGGTACGGGACAGGAGCAACTGAGACGATCACATTCCA 1065
|||||||||||||| || ||||||||| |||| |||||| |||||||||||||||||| |
Sbjct 1050 TGCCTTTTGGAACCTTCTTGATTGGTAGGGGAGAGGAGCCACTGAGACGATCACATTCAA 1109
Query 1066 TGACAACAAGGAAACAGGGCAACCATCTGGCTCAAGGATTTACAGTAGGATATAAAAATG 1125
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 TGACAACAAGGAAACAGGGAAACCATCTGGCTCAAGGATTTACAGTAGGATATAAAAATG 1169
Query 1126 GTGGAAACATTAATACTTACAACGGACATGGTATACTTCCTGGAACTAGCCCTGCAAAGA 1185
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 1170 GTGGAAACATTAATACTTTCAACGGACATGGTATACTTCCTGGAACTAGCCCTGTAAAGA 1229
Query 1186 GCTCCAAAAGAACAGGTTTCGATAAGGATTTTCCTTTGCTTAGAGCTGAAGAGAGAAATG 1245
|||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 1230 GCTCCAAAAGAATGGGTTTCAATAAGGATTTTCCTTTGCTTAGAGGTGAAGAGAGAAATG 1289
Query 1246 GAGGCCCAGACGTCGTAAGAATAGCATCTCCTGTTCTAAGTCCAACTGCTCAGAGCTTGT 1305
||||||||||||| |||||||| ||||||||| || |||||| ||||||||||||||||
Sbjct 1290 GAGGCCCAGACGTTGTAAGAATCTCATCTCCTGGTCGAAGTCCTACTGCTCAGAGCTTGT 1349
Query 1306 CAGTTGGTAATCCAGCCTTGATTGTTGGGGAAGGTTGGACATCGGCTCTGGCAGAGGTTC 1365
|||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 1350 CAGTTGCTAATCCAGCCTTGATTATCGGGGAAGGTTGGACATCGGCTCTGGCAGAGGTTC 1409
Query 1366 CAAATGTTATTGAGAAGAGTGGTACTGGT---TCCCATTCTAATGTTGGTAGTTCGGCTA 1422
| ||||||||||||||||||||| || | |||||| ||||||| |||| ||||||||
Sbjct 1410 CCAATGTTATTGAGAAGAGTGGTGGTGCTGAATCCCATGCTAATGTGGGTAATTCGGCTA 1469
Query 1423 CCTTAAC-GGTACCAACTTGTCGTAACATGGCTGAAGCATTGGTGCAGGCTCCAGGAAGA 1481
||||| | || |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1470 CCTTATCTGG-ACCAGCTTGTCGTAACATGGCTGAAGCATTGGTGCAGGCTCCAGGAAGA 1528
Query 1482 ACTGTTACACCACCCCAGGCACAAACACTTGAGGACCGAGCTATTAGGCAGTCTAGGCAG 1541
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1529 ACTGGTACACCACCCCAGGCACAAACACTTGAGGACCGAGCTATTAGGCAATCTAGGCAG 1588
Query 1542 TTGATACCTGTTGTGCCTTCAGCACCAAAGGGCTCAGTTCATAACTCTTCTGATAAATCC 1601
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1589 TTGATACCGGTTGTGCCTTCAGCACCAAAGGGCTCAGTTCATAACTCTTCTGATAAATCC 1648
Query 1602 AAGACCAAACCAATGTTTCGAAGTGGTGAAATCGGTCTTGCTTCTTCAAGAAATACCCAA 1661
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1649 AAGACCAAACCAATGTTTCGAAGTGGTGAAACCGGTCTTGCTTCTTCAAGAAATACCCAA 1708
Query 1662 CAGCATTCCTCTGTGATGCTCGGTAATCTGCAGTCTAATCCTGGTAGTCAGATCAAGCCT 1721
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1709 CAGCAGTCCTCTGTGATGCTCGGTAATATGCAGTCTAATCCTGGTAGTCAGATCAAGCCT 1768
Query 1722 GATACGACTAAGAAGCTGGTGATTCTCAAATCTGCTAGGGAAAATGGGGTAGTTGCTGGA 1781
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1769 GATACGACTAAGAAGCTGGTGATTCTCAAACCTGCTAGGGAAAATGGGGTAGTTGCTGGA 1828
Query 1782 GGTTCACCACCCAGCAGCCGAGCTGCTGCTAGCCAGCTGACCACTGCTCCATCTACACAA 1841
||||||||||||| |||||||| ||| |||||||||| ||||||||| ||||| ||||||
Sbjct 1829 GGTTCACCACCCAACAGCCGAGTTGCCGCTAGCCAGCCGACCACTGCCCCATCCACACAA 1888
Query 1842 TTTACTGCTTCTGTGAGAAGTACAAATGGTCCAAGGGAGCCCAGGGGAGCTTCTGTAAAC 1901
|||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||
Sbjct 1889 TTTACTGCTTCTGTGAGAAGCACAAATGGTCCAAGGGATCTCAGGGGAGCTTCTGTAAAC 1948
Query 1902 ATGATAGCTGGAAAAACCGCTGAAAAGAAACTTTCCTTGGCTCAAACTCAGAGTAGGCAT 1961
||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1949 ATGTTAGCTGGAAAAGCCGCTGAAAAGAAACTTTCCTTGGCTCAAACTCAGAGCAGGCAT 2008
Query 1962 GCATTTTTCAGTGCTTTGAAGCAGAAAACATCTACAAACATCTCAACTGATCCATCAAAA 2021
||||||| ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||
Sbjct 2009 GCATTTTACAGTGCTTTGAAGCAAAAAACATGTACGAACATCTCAACTGATCCATCAAAA 2068
Query 2022 ACCAGCTCTTGCATCTTGTCTTCAGTGGAGGAAAAGGCAAACAGTTCTAAGGAGCTTGTA 2081
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2069 ACCAGCTCTTGCATCTTGTCTTCAGTGGAGGAACAGGCAAACAGTTCTAAGGAGCTTGTA 2128
Query 2082 GCTAGTGACCCTTCAAGTCCACAGGCTGCAGAAAGAGATGAAATCATGGAAAGTGTCGAG 2141
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2129 GCTAGTGACCCTTCAAGTCCACAAGCTGCAGAAAGAGATGAAATCATGGAAAGTGTCGAG 2188
Query 2142 AAAGTTTCTGATGTTGCAGAAAGGATTAGTAGATTTGAATCGGCAGTCCGTCCAGATCCA 2201
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2189 AAAGTTTCTAACGTTGCAGAAAGGATTAGTAGATTTGAATCGGCAGTCCGTCCAGATCCA 2248
Query 2202 AAAGAGGCTGCGTTCCTTAAATCCCTTGGGTGGGATGAAAATGACAGCGAAGAATACACC 2261
||||||||||| ||||||||||||||||| |||||||| ||||| ||||| |||||||||
Sbjct 2249 AAAGAGGCTGCATTCCTTAAATCCCTTGGTTGGGATGAGAATGATAGCGACGAATACACC 2308
Query 2262 CTCCCAATGGAGGAGATGATCGAATGGTGCAAGAAGTTCAAGCCATCACTGCTGCAGAAG 2321
| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2309 CACACAATGGAGGAGATGAGAGAATGGTGCAAGAAGTTCAAGCCATCACTGCTGCAGAAG 2368
Query 2322 CTGCCTATCATATAAGAAGCAACCGAGGACATAGCTCCCGACTCG--ATCAGATTTTGTT 2379
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 2369 CTGCCTATCATATAAGAAGCAACTGAGGACATAGCTCCCGACTCGTGATCAGATTTTGTT 2428
Query 2380 CGGGGTTC-CAGATGGAAGATAGtttt-cgttctcttttcttttctttattttctttggc 2437
||||||| |||||||||||||||||| | ||||||||||||||||||||| |||||||
Sbjct 2429 CGGGGTTTTCAGATGGAAGATAGTTTTTCATTCTCTTTTCTTTTCTTTATTCTCTTTGGT 2488
Query 2438 tttttttttttaattttGGTTACTTCAGCTCTGGCAAGAAGGTGGGAAGGCTTTAGTTGC 2497
||||||||||| ||||||||||||| || ||||| ||||||||| ||||||||||||||
Sbjct 2489 TTTTTTTTTTTTCTTTTGGTTACTTCGGCGCTGGCTAGAAGGTGGAAAGGCTTTAGTTGC 2548
Query 2498 AGTAAGAGTGTTGTTCTGCTTCTTCTTCAGAGTTGCTACAAAATGaaaaaaaaaGCTGAC 2557
||||||||| |||||||||||||||||||||| ||| ||||||||||||| ||||||
Sbjct 2549 AGTAAGAGTATTGTTCTGCTTCTTCTTCAGAGGTGCAACAAAATGAAAAATG--GCTGAC 2606
Query 2558 TATTTTGTACATCTTTGGTCTGAAGATAAGAGGGCTTTGTCTTTGGCATCTTCTTTTAGG 2617
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 2607 TATTTTGTACATCTTTGGTCTGAAGATAAGTGGGCTTTGTCTATGGCATCTTCTTTTAGG 2666
Query 2618 TTTTCTAATGTTTGATGATCATTTCATTCATGGTCAGGGAAAGAGAAAAATGCCGATGGG 2677
||||||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||
Sbjct 2667 TTTTCTAATGTTTGATGATCATT-CAT----GGTGAGGGAAAGAGAAAATTGCCGATGGG 2721
Query 2678 GGTTTAGCAGAAAATTTAAAGAATTCGttttcttacctttttatgaaatttatcctttag 2737
|||| || |||||| ||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 2722 GGTTAAGTAGAAAAGTTAAAGAATTCGTTTTCTTACCTTTTTATGAAATTCATCTTTTAG 2781
Query 2738 gcttttatattttatataatttatttatt 2766
|||| |||||||||||| ||||||| |||
Sbjct 2782 GCTTATATATTTTATATTATTTATTCATT 2810
> AT1G36990.1 | Symbols: | unknown protein; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING:
14 growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to
1779 proteins in 339 species: Archae - 2; Bacteria - 1372;
Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other
Eukaryotes - 1593 (source: NCBI BLink). | chr1:14027292-14030500
REVERSE LENGTH=2837
Length=2837
Score = 662 bits (358), Expect = 0.0
Identities = 1081/1411 (77%), Gaps = 125/1411 (9%)
Strand=Plus/Plus
Query 782 TAATAGCAAGAATAGGAATTCTAGGAGCAGAAGTGATGTTGATTCAGTTCGGTCTCCTTT 841
|||||||| ||||||||| |||||||||| |||||| ||||||||| ||| ||||||||
Sbjct 918 TAATAGCAGGAATAGGAACTCTAGGAGCAAAAGTGACGTTGATTCAATTCATTCTCCTTT 977
Query 842 TCTCGATCGGTCTTCTTCTACCAATACAAGGAGGGGATCTAGTAATGGTTCTACCAAACA 901
||| ||||| ||||||||||| ||| |||||||||| ||||||||||||||| | |||||
Sbjct 978 TCTGGATCGATCTTCTTCTACTAATTCAAGGAGGGGCTCTAGTAATGGTTCTGCAAAACA 1037
Query 902 TGCATATAGTAGTTTCAACTTCAATAGGAG-CAACAGAGATAAAGATCGGAGCAGGGAGA 960
||||||||||||||||||||| |||||||| ||| || ||||| || || ||||| || |
Sbjct 1038 TGCATATAGTAGTTTCAACTTTAATAGGAGTCAA-AGGGATAAGGACCGCAGCAGAGACA 1096
Query 961 AAGATAGGTTGAGCTACATGGATCCATGGGACCATGACACTTCTCTGCCTTTTGGAACCA 1020
| |||||| | ||||| ||||||||||||||| |||||||||| | ||| || |||| |
Sbjct 1097 AGGATAGGGTAAGCTATGTGGATCCATGGGACCTTGACACTTCTATCCCTCTTAGAACTA 1156
Query 1021 TCGTGATTGGTACGGGA-CAGGAGCAACTGAGACGATCACATTCCATGACAACAAGGAAA 1079
|| ||| ||||| |||| | ||| | | |||||||||||||||| ||| |||||||||
Sbjct 1157 TCTTGACTGGTA-GGGATCCGGATCCATTGAGACGATCACATTCAATGGTTACAAGGAAA 1215
Query 1080 CAGGGCA-ACCATCTGGCTCAAGGATTTACAGTAGGATAT-AAAAATGGTGGAAACATTA 1137
||||| | | || ||| ||| |||||| ||||| || | | || |||||||| | | ||
Sbjct 1216 CAGGG-AGAACACCTGTCTCGAGGATTAACAGTGGGCT-TGAATAATGGTGGCAGTAGTA 1273
Query 1138 ATACTTACAACGGACATGGTA-TACTTCCTGGAACTAGCCCTGCAAAGAGC-TCCAAAAG 1195
||| |||||||||| |||| | ||||| ||||| ||||| || || ||| | | | ||
Sbjct 1274 ATAGTTACAACGGAAATGG-ACTACTTTCTGGACCTAGCATTGGGAATAGCTTTC-AGAG 1331
Query 1196 AAC-AGGTTTCGATAAGGATTTTCCTT-TGCTTAGAGCTGAAGAG-AG--AAATGGAGGC 1250
||| ||||| |||||||||||||||| | ||| ||||||||||| || |||| | ||
Sbjct 1332 AACTGGGTTT-GATAAGGATTTTCCTTCT-CTTGGAGCTGAAGAGAAGCAAAAT-G-GG- 1386
Query 1251 CCAGACGTCGTAAGAATAGCATCTCCTGTTCTAAGTCCAACTGCTCAGAGCTTGTCAGTT 1310
| ||| || ||| || | ||||||||| | ||||| || || ||||| |||| |||||
Sbjct 1387 CAAGATGTTGTACGAGTCTCATCTCCTGGTATAAGTTCAGTTGTTCAGAACTTGCCAGTT 1446
Query 1311 GGTAATC-CAGCCTTGATTGTTGGGGAAGGTTGGACATCGGCTCTGGCAGAGGTTCCAAA 1369
||||| | |||| ||||||| ||||||||||||||| || ||||||||||||||||| ||
Sbjct 1447 GGTAA-CTCAGCTTTGATTGGTGGGGAAGGTTGGACGTCTGCTCTGGCAGAGGTTCCCAA 1505
Query 1370 TGTTATTGAGAAGAG-TGGTACT-GG----T----TC-CC--ATTCTAATGTTGGTAGTT 1416
||| || |||||| | | ||||| || | || || | |||||| || |||
Sbjct 1506 TGTCATCGAGAAG-GCTTGTACTGGGTCATTAACGTCTCCAAAAGCTAATGCTGTTAGCG 1564
Query 1417 CGGCTACCTTAAC-GGTACCAACTTGTCGTAACATGGCTGAAGCATTGGTGCAGGCTCCA 1475
||| || ||||| || |||| | ||| |||||||||||||||||||||||||||||||
Sbjct 1565 CGGGAACTTTAACTGG-CCCAAGTGGTCTTAACATGGCTGAAGCATTGGTGCAGGCTCCA 1623
Query 1476 GGAAGAACTGTTACACCACCCCA-GG--C----A---CA-AACA-CTTGAGGACC-GAGC 1522
| ||||||| || || ||||| || | | || ||| || ||||| | ||
Sbjct 1624 GCAAGAACTCACACCCCTCCCCAAGGATCTGTGAAGACACAACGGCTCGAGGATTTG-GC 1682
Query 1523 TATTAGGCAGTCTAGGCAGTTGATACCTGTTGTGCCTTCAGCACCAAAGGGCTC-AGTTC 1581
|| | |||||| ||||| |||||||| ||||||||||||||||||||||||| ||| |
Sbjct 1683 AATCAAGCAGTCAAGGCAATTGATACCGGTTGTGCCTTCAGCACCAAAGGGCTTGAGT-C 1741
Query 1582 AT-AACTCTTCTGATAAATCCAAGACCAAACCAA-TGTTTCGAAGTGGTGAAA-TCGGTC 1638
| || |||||||||||||||||||| ||| ||| || |||||| |||||||| | | |
Sbjct 1742 -TGAATTCTTCTGATAAATCCAAGAC-AAAGCAAGTGGTTCGAACTGGTGAAACTTGC-C 1798
Query 1639 TTGCTTCTTCAAGAAATACCCAACAGCATTCCTCTGTGATGCTCGGTAATCTGCAGTCTA 1698
||||| | ||||||||| ||| ||| || || |||| | || || | | | |||||||
Sbjct 1799 TTGCTCCCTCAAGAAATGCCCTACAACAGCCCGCTGTCCTACTTGGGAGTTTCCAGTCTA 1858
Query 1699 ATCCTGGTAGTCAGATCAAGCCTGATACGACTAAGAAGCTGGTGATTCTCAAATCTGCTA 1758
||||| || |||| ||||| ||||| || | ||||||| || |||||||| | ||||
Sbjct 1859 ATCCTAGTGGTCAAATCAAACCTGA---GA--A-GAAGCTGTTGGTTCTCAAACCGGCTA 1912
Query 1759 GGGAAAATGGGGT-AGTTGCTGG-AG-GT-TCACCA--CCCA-G--C-AG--C---C--- 1800
|||||||||| || ||| |||| | | || | |||| | | | | |
Sbjct 1913 GGGAAAATGGTGTCAGT-GCTGTTAAAGAATCTGGAAGCCCAAGTGCTAATACAAACACT 1971
Query 1801 -GAGCTGC-TGCTAGCCAGCTGA---CCACTGCTCCATCTACACAATTTACTGCTTCTGT 1855
||||||| | |||||||||||| ||| | ||| ||| || |||| ||||| ||||
Sbjct 1972 CGAGCTGCCT-CTAGCCAGCTGATGTCCAATACTCAATCAACCCAAT---CTGCTCCTGT 2027
Query 1856 GAGAAGTACAAATGGTCCAAGGGAGCCCAGGGGAGCTTCTG--TAAAC-ATGATAGCTGG 1912
|||||||||||| | |||| ||||| || |||||| || | | |||||| ||||
Sbjct 2028 GAGAAGTACAAACAGCCCAAAGGAGCTCAAGGGAGCCAGTGCCTTCTCCATGATATCTGG 2087
Query 1913 AAAAACCG-CTGAAAAGAAACTTTCCT-TGGCTCAAACTCAGAGTAGGCA-TGCATTTTT 1969
|||| | |||||||||| |||| || ||||| ||||||| ||| | ||||||||
Sbjct 2088 CCAAACAATC-GAAAAGAAACCTTCCGCTG-CTCAAGCTCAGAGCAGG-AGTGCATTTTA 2144
Query 1970 CAGTGCTTTGAAGCAGAAA-ACA-T-C-T-A-CAAACATCTCAACTGATCC----A--TC 2017
||||||| ||||||||||| | | | | | | ||| |||| | || ||||| | ||
Sbjct 2145 CAGTGCTCTGAAGCAGAAACAAACTGCATCAACAAGCATCACCACCGATCCTGTTAGCTC 2204
Query 2018 AAAAACCAGCTCTTGCATCTTGTCTTCAGTGGAGG-AAAAGGCAAACAGTTCTAAGGAGC 2076
|||||| | || |||| |||| || |||| |||| ||| ||| || ||||| |
Sbjct 2205 TTCAACCAG-T---GCCTCTT--CTTCTGTTGAGGTAAAACTCAA-CAGCTCAAAGGATC 2257
Query 2077 TTGTAGCTAGTGACCCTTCAAGTCCACAGGC 2107
|| |||||||||||||||||||| |||||||
Sbjct 2258 TTATAGCTAGTGACCCTTCAAGTTCACAGGC 2288
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137407256877
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5