BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489772
Length=1230
Score E
Sequences producing significant alignments: (Bits) Value
AT4G08770.1 | Symbols: Prx37 | Peroxidase superfamily protein |... 1910 0.0
AT4G08780.1 | Symbols: | Peroxidase superfamily protein | chr4... 1570 0.0
AT5G19890.1 | Symbols: | Peroxidase superfamily protein | chr5... 91.6 2e-17
> AT4G08770.1 | Symbols: Prx37 | Peroxidase superfamily protein
| chr4:5598115-5600312 REVERSE LENGTH=1235
Length=1235
Score = 1910 bits (1034), Expect = 0.0
Identities = 1170/1236 (95%), Gaps = 7/1236 (1%)
Strand=Plus/Plus
Query 1 TCACTCAAATTAAACCATAACCAAAT-ATCTATCTT-AGAGAGCAAAGAAAATGCATTCC 58
|||||||||||||||||||||||||| || | |||| | ||||| |||||||||||||||
Sbjct 1 TCACTCAAATTAAACCATAACCAAATAAT-TCTCTTAAAAGAGCTAAGAAAATGCATTCC 59
Query 59 TCTTTGATAAAATTGGGATTTCTTCTTCTTC---TTCAGGTCTCATTGTCTCATGCTCAA 115
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct 60 TCTTTGATAAAATTGGGATTTCTTCTTCTTCTTATTCAGGTATCATTGTCTCATGCTCAA 119
Query 116 CTAAGCCCTTCCTTTTATGATAAAACATGTCCGCAAGTCTTTGACATTGTAACCAATACC 175
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 120 CTAAGCCCTTCCTTTTACGATAAAACATGTCCGCAAGTCTTTGACATTGCAACCACTACC 179
Query 176 ATTGTCAATGCTCTGAGATCAGACCCTCGCATCGCTGCAAGCATCATTCGTCTTCATTTC 235
|||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 180 ATTGTCAATGCTCTAAGATCGGACCCTCGCATCGCTGCAAGCATCCTTCGTCTTCATTTC 239
Query 236 CACGACTGCTTTGTTAATGGATGTGATGCATCGATATTGTTAGACAACACCACATCGTTT 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 CACGACTGCTTTGTTAATGGATGTGATGCATCGATATTGTTAGACAACACCACATCGTTT 299
Query 296 AGGACGGAGAAAGACGCCTTTGGGAACGCTAATTCCGCTCGAGGTTTCGATGTGATCGAC 355
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 AGGACGGAGAAAGATGCGTTTGGGAACGCTAATTCCGCTCGAGGTTTCGATGTGATCGAC 359
Query 356 AAAATGAAGGCTGCCGTAGAGAAAGCATGTCCTAGAACTGTTTCATGTGCTGATTTGCTC 415
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 360 AAAATGAAGGCTGCCGTGGAGAAAGCATGTCCTAAAACTGTTTCATGTGCTGATTTGCTC 419
Query 416 GCCATCGCAGCTCAAGAATCTGTTGTTTTGGCAGGAGGTCCTTCATGGAGGGTTCCAAAT 475
|||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 420 GCCATCGCGGCTCAAGAATCTGTCGTTTTGGCGGGAGGTCCTTCATGGAGGGTTCCAAAT 479
Query 476 GGAAGAAGAGACAGCTTAAGAGGGTTTATGGATCTTGCTAATGATAACCTTCCAGCTCCA 535
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 480 GGAAGAAGAGACAGCTTAAGAGGGTTCATGGATCTTGCTAATGATAACCTTCCAGCTCCA 539
Query 536 TCCTTTACCCTTAAACAACTTAAGGATAGATTCAAAAATGTCGGACTCGACCGTGCTTCT 595
| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 540 TTCTTTACCCTTAACCAACTTAAGGATAGATTCAAAAACGTCGGACTCGACCGTGCTTCT 599
Query 596 GATCTCGTTGCTCTTTCCGGTGGTCACACTTTTGGCAAAAACCAATGTCGGTTCATAATG 655
||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||
Sbjct 600 GATCTCGTTGCTCTTTCTGGTGGTCACACCTTTGGCAAAAACCAATGTCAATTCATAATG 659
Query 656 GATCGGCTTTACAACTTCAGTGACACCGGTTTACCCGACCCAACCCTTGATAAATCTTAT 715
||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 660 GATCGGCTTTATAACTTCAGTAACACTGGTTTACCCGACCCAACCCTTGATAAATCTTAC 719
Query 716 CTCACCACACTCAGAAAACAATGTCCGCGTAACGGAAACCAGAGTGTCTTGGTAGATTTT 775
||| |||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||
Sbjct 720 CTCTCCACACTCAGAAAACAATGTCCACGTAATGGAAACCAGAGTGTATTGGTAGATTTT 779
Query 776 GATTTACGTACACCAACACTCTTTGACAACAAATACTATGTGAATCTCAAAGAGAACAAA 835
||||||||||| |||||||||||||||||||| || |||||||| ||||| |||||||||
Sbjct 780 GATTTACGTACGCCAACACTCTTTGACAACAAGTATTATGTGAACCTCAAGGAGAACAAA 839
Query 836 GGACTTATCCAGAGCGACCAAGAGTTATTCTCTAGCCCTGATGCTTCGGACACTCTCCCT 895
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 840 GGACTTATCCAGAGCGACCAAGAGTTATTCTCTAGCCCTGATGCTTCAGACACTCTTCCT 899
Query 896 TTAGTCCGAGAATTCGCTGATGGTCAAGGAAAATTTTTCGATGCGTTCGTGAAGGCAATG 955
||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 900 TTAGTCCGAGAATACGCTGATGGTCAAGGGAAATTTTTCGATGCGTTCGCGAAGGCAATG 959
Query 956 ATAAGGATGAGTAGTCTTTCACCTTTAACAGGGAAGCAAGGAGAAATAAGATTGAATTGT 1015
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 960 ATAAGGATGAGTAGTCTTTCACCTTTAACAGGGAAACAAGGAGAAATAAGATTGAACTGT 1019
Query 1016 AGAGTGGTGAATTCGAAACCGAGAATCATGGATGTGGTAGAAGATGCTATTAAATTTGCT 1075
|||||||||||||||||| | | ||||||||||||||||||||||||| || |||||||
Sbjct 1020 AGAGTGGTGAATTCGAAATCTAAAATCATGGATGTGGTAGAAGATGCTCTTGAATTTGCA 1079
Query 1076 AGCTCAATGTGAGGAAATGTTTTTCTTTAATAATAAATAAATTATCAATGTTGTCAAGAT 1135
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1080 AGCTCAATGTGAGGAAATGTTTTTCTTTAACAATAAATAAATTATCAATGTTGTCAAGAT 1139
Query 1136 GTTATCTTTTCTTCTTACTTCCTTGTTTCTTTTACGTTACTTATTTAAAATCTATATAAC 1195
|||||||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||
Sbjct 1140 GTTATCTTTTTTTCTTACTTCCTTGTTTGTTTTGTGTTACTTATTTAAATTCTATATAAC 1199
Query 1196 TATTAA-CCTTGGATCCATAATTTATTTTTACCTAT 1230
|||||| ||||| |||||||| ||||||||||||||
Sbjct 1200 TATTAAACCTTGAATCCATAAATTATTTTTACCTAT 1235
> AT4G08780.1 | Symbols: | Peroxidase superfamily protein | chr4:5604153-5608202
FORWARD LENGTH=1041
Length=1041
Score = 1570 bits (850), Expect = 0.0
Identities = 980/1043 (94%), Gaps = 7/1043 (1%)
Strand=Plus/Plus
Query 50 ATGCATTCCTCTTTGATAAAATTGGGATTTCTTC-T-T-CTTCTTCAGGTCTCATTGTCT 106
|||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||
Sbjct 1 ATGCATTCCTCTTTGATAAAATTGGGATTTCTTCTTCTCCTTCTTCAGGTCTCATTGTCT 60
Query 107 CATGCTCAACTAAGCCCTTCCTTTTATGATAAAACATGTCCGCAAGTCTTTGACATTGTA 166
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 61 CATGCTCAACTAAGCCCTTCCTTTTACGATAAAACATGTCCGCAAGTCTTTGATATTGTA 120
Query 167 ACCAATACCATTGTCAATGCTCTGAGATCAGACCCTCGCATCGCTGCAAGCATCATTCGT 226
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 121 ACCAATACCATTGTCAATGCGCTGAGATCAGACCCTCGCATCGCTGCAAGCATCCTTCGT 180
Query 227 CTTCATTTCCACGACTGCTTTGTTAATGGATGTGATGCATCGATATTGTTAGACAACACC 286
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CTTCATTTCCACGACTGCTTTGTTAATGGATGTGATGCATCGATATTGTTAGACAACACA 240
Query 287 ACATCGTTTAGGACGGAGAAAGACGCCTTTGGGAACGCTAATTCCGCTCGAGGTTTCGAT 346
||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct 241 ACATCGTTTAGGACGGAGAAAGATGCGTTTGGGAACGCTAATTCAGCTCGAGGTTTCGAT 300
Query 347 GTGATCGACAAAATGAAGGCTGCCGTAGAGAAAGCATGTCCTAGAACTGTTTCATGTGCT 406
|| ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct 301 GTAATCGACAAAATGAAGGCTGCCATCGAGAAAGCATGTCCTAGAACCGTTTCATGTGCT 360
Query 407 GATTTGCTCGCCATCGCAGCTCAAGAATCTGTTGTTTTGGCAGGAGGTCCTTCATGGAGG 466
||| ||||||||||||||||| |||||||| | |||||||| |||||||||||||||| |
Sbjct 361 GATATGCTCGCCATCGCAGCTAAAGAATCTATCGTTTTGGCGGGAGGTCCTTCATGGATG 420
Query 467 GTTCCAAATGGAAGAAGAGACAGCTTAAGAGGGTTTATGGATCTTGCTAATGATAACCTT 526
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 421 GTTCCAAATGGAAGAAGAGACAGCTTAAGAGGTTTTATGGATCTTGCTAATGATAACCTT 480
Query 527 CCAGCTCCATCCTT-TACCCTTAAACAACTTAAGGATAGATTCAAAAATGTCGGACTCGA 585
|||| ||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 481 CCAGGTCCAT-CTTCTACACTTAAACAACTTAAGGATAGATTCAAAAATGTCGGACTCGA 539
Query 586 CCGTGCTTCTGATCTCGTTGCTCTTTCCGGTGGTCACACTTTTGGCAAAAACCAATGTCG 645
|||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 540 CCGTTCTTCTGATCTAGTTGCTCTTTCCGGTGGTCACACTTTTGGCAAAAGCCAATGTCA 599
Query 646 GTTCATAATGGATCGGCTTTACAACTTCAGTGACACCGGTTTACCCGACCCAACCCTTGA 705
||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||
Sbjct 600 GTTCATAATGGATCGTCTTTACAACTTCGGTGAAACCGGTTTACCCGACCCAACCCTTGA 659
Query 706 TAAATCTTATCTCA-CCACACTCAGAAAACAATGTCCGCGTAACGGAAACCAGAGTGTCT 764
||||||||| || | ||||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct 660 TAAATCTTACCT-AGCCACACTAAGAAAACAATGTCCACGTAATGGAAACCAGAGTGTCT 718
Query 765 TGGTAGATTTTGATTTACGTACACCAACACTCTTTGACAACAAATACTATGTGAATCTCA 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 TGGTAGATTTTGATTTACGTACACCAACACTCTTTGACAACAAATACTATGTGAATCTCA 778
Query 825 AAGAGAACAAAGGACTTATCCAGAGCGACCAAGAGTTATTCTCTAGCCCTGATGCTTCGG 884
| |||||||||||||||||||| || ||||||||||| |||||||||||||||||| | |
Sbjct 779 AGGAGAACAAAGGACTTATCCAAAGTGACCAAGAGTTGTTCTCTAGCCCTGATGCTGCAG 838
Query 885 ACACTCTCCCTTTAGTCCGAGAATTCGCTGATGGTCAAGGAAAATTTTTCGATGCGTTCG 944
|||||||||||||||| |||| || ||||||||||||||| | |||||||||||||||||
Sbjct 839 ACACTCTCCCTTTAGTTCGAGCATACGCTGATGGTCAAGGGACATTTTTCGATGCGTTCG 898
Query 945 TGAAGGCAATGATAAGGATGAGTAGTCTTTCACCTTTAACAGGGAAGCAAGGAGAAATAA 1004
|||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 899 TGAAAGCAATAATAAGGATGAGTAGTCTTTCACCTTTAACAGGGAAACAAGGAGAAATAA 958
Query 1005 GATTGAATTGTAGAGTGGTGAATTCGAAACCGAGAATCATGGATGTGGTAGAAGATGCTA 1064
||||||| ||||||||||||||||||||| | | |||||||||||||||||| ||||||
Sbjct 959 GATTGAACTGTAGAGTGGTGAATTCGAAATCTAAAATCATGGATGTGGTAGATGATGCTC 1018
Query 1065 TTAAATTTGCTAGCTCAATGTGA 1087
|| ||||||| |||| ||||||
Sbjct 1019 TTGAATTTGCCAGCTTTATGTGA 1041
> AT5G19890.1 | Symbols: | Peroxidase superfamily protein | chr5:6724115-6725923
REVERSE LENGTH=1290
Length=1290
Score = 91.6 bits (49), Expect = 2e-17
Identities = 55/58 (95%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 219 TCATTCGTCTTCATTTCCACGACTGCTTTGTTAATGGATGTGATGCATCGATATTGTT 276
||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct 237 TCATTCGTCTTCATTTCCACGACTGCTTTGTTAATGGGTGTGATGCGTCGTTATTGTT 294
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 60441456180
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5