BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489792 Length=552 Score E Sequences producing significant alignments: (Bits) Value AT4G09320.1 | Symbols: NDPK1 | Nucleoside diphosphate kinase fa... 774 0.0 > AT4G09320.1 | Symbols: NDPK1 | Nucleoside diphosphate kinase family protein | chr4:5923400-5924532 FORWARD LENGTH=700 Length=700 Score = 774 bits (419), Expect = 0.0 Identities = 493/528 (93%), Gaps = 7/528 (1%) Strand=Plus/Plus Query 25 TTTTTGCCTCCTACGAGTCACAAGTAAGCa-aaaa-aaTGGAGCAAACTTTCATCATGAT 82 |||||||||||||||| |||||||||| | |||| ||||||||||||||| || ||||| Sbjct 48 TTTTTGCCTCCTACGAATCACAAGTAATAAGAAAACAATGGAGCAAACTTTTATTATGAT 107 Query 83 CAAGCCTGACGGCGTCCAGAGAGGACTCATCGGTGAAGTCATCTCCAGGTTTGAGAAGAA 142 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 108 CAAGCCTGACGGCGTCCAGAGAGGACTCATCGGTGAAGTCATCTGCAGGTTTGAGAAGAA 167 Query 143 GGGTTTCACTTTGAAAGGTCTGAAGTTGATCAGTGTAGAGCGATCTTTTGCTGAGAAGCA 202 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 168 GGGTTTCACTTTGAAAGGTCTGAAGTTGATCAGTGTAGAGAGATCTTTTGCTGAGAAGCA 227 Query 203 CTACGAAGACTTGTCTTCAAAGCCTTTCTTCAGTGGACTTGTTGATTACATTGTGTCTGG 262 |||||||||||| ||||||||| |||||||||||||||| ||||| |||||||| || || Sbjct 228 CTACGAAGACTTATCTTCAAAGTCTTTCTTCAGTGGACTCGTTGACTACATTGTATCCGG 287 Query 263 CCCTGTTGTTGCCATGATCTGGGAAGGAAAGAATGTTGTGTTGACGGGAAGAAAGATTAT 322 |||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| || Sbjct 288 CCCTGTTGTTGCTATGATCTGGGAAGGAAAGAATGTTGTCTTGACCGGAAGAAAGATCAT 347 Query 323 CGGAGCTACCAACCCAGCAAACT-CTGAGCCTGGAACTATCCGTGGGGACTTTGCTATTG 381 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 348 TGGAGCTACCAACCCAGCAG-CTTCTGAGCCTGGAACTATCCGTGGGGACTTTGCTATTG 406 Query 382 ACATTGGCAGGAATGTTATCCACGGGAGTGACGCTGTCGAGAGTGCGAGAAAGGAGATTG 441 ||||||||||||| || ||||| || |||||| ||||||||||||| ||||||||||||| Sbjct 407 ACATTGGCAGGAACGTGATCCATGGTAGTGACTCTGTCGAGAGTGCAAGAAAGGAGATTG 466 Query 442 CTTTGTGGTTCCCTGATGGACCTGTCAACTGGCAGAGCAGTGTTCACCCTTGGATCTATG 501 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 467 CTTTGTGGTTCCCTGATGGACCTGTCAACTGGCAGAGCAGCGTTCACCCTTGGGTCTATG 526 Query 502 AATGATCTTGATGATCTGTTGCTTTTTCAATAGTGTGTTTTCGACATT 549 || | ||||||||||||||||||||||| |||||||||||||||||| Sbjct 527 AA--A-CTTGATGATCTGTTGCTTTTTCAGTAGTGTGTTTTCGACATT 571 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26473395469 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5