BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489803
Length=2039
Score E
Sequences producing significant alignments: (Bits) Value
AT4G09510.1 | Symbols: CINV2 | cytosolic invertase 2 | chr4:602... 3038 0.0
AT1G72000.1 | Symbols: | Plant neutral invertase family protei... 765 0.0
> AT4G09510.1 | Symbols: CINV2 | cytosolic invertase 2 | chr4:6021164-6023873
REVERSE LENGTH=2032
Length=2032
Score = 3038 bits (1645), Expect = 0.0
Identities = 1919/2049 (94%), Gaps = 27/2049 (1%)
Strand=Plus/Plus
Query 1 GTTTTGTATTCTTCTTCCTTACTTGTTCA-TCTATCTATAAAACAACAACTTCACTCATC 59
|||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||
Sbjct 1 GTTTTGTATTCTTCTTCCTTACTTCTT-ATTCTATCTATAAAACAACAACTTCACTCATC 59
Query 60 ATGACTCTTTTTTCCCGTTTTCTTACTCTTTTGCCCCTTCTTCTCTCACTCTCCGGCGAA 119
|||||||||||| ||| |||||||||||| |||||| ||||||||||||||||||||| |
Sbjct 60 ATGACTCTTTTTCCCCATTTTCTTACTCTCTTGCCCTTTCTTCTCTCACTCTCCGGCG-A 118
Query 120 ATCGCCGGCGAGTTTTTGACACTTCCGTCGTCTTCTCAGTTGTTGTTGTTGTTTATGACT 179
| | ||||||||| ||||||||||||||||||||||||||||||||| || | | |
Sbjct 119 CT-G-TTACGAGTTTTTAACACTTCCGTCGTCTTCTCAGTTGTTGTTGTTG-TT-T-A-T 172
Query 180 GAACCTATAGATCTTGTTCTATCCATTAAAACCAAATAAAT---GGAAGGTCATAAAGAA 236
| | | | |||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct 173 G-A-C-A-AGATCTTGTTCTATCCATTAAAACCAAAGAAATGGAGGAAGGTCATAAAGAA 228
Query 237 CCATT-GTGGCTAAGAGTTGAAGGATCACATTGTTCATTATCAGAGATGGATGATTTTGA 295
||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 229 CCATTGGT-GCTAAGAGTTGAAGGATCACATTGTTCTTTATCAGAGATGGATGATTTTGA 287
Query 296 TCTAACTCGGGCTTTGGAGAAGCCGAGGCAGCTAAAGATTGAACGGAAGAGATCATTTGA 355
||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 288 TCTAACTCGGGCTTTAGAGAAGCCGAGGCAGCTAAAGATCGAACGGAAGAGATCGTTTGA 347
Query 356 TGAAAGATCAATGAGCGAGTTATCGACTGGCTATGCAAGACAAGACAGCATTTTAGAAAT 415
||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 348 CGAAAGGTCGATGAGCGAGTTATCGACTGGCTATGTAAGACAAGATAGCATTTTAGAAAT 407
Query 416 GGCTCATTCTCCTGGAAGTAGGTCAATGGTGGACACTCCTCTCTCTGTTAGGAACTCGTT 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 408 GGCTCATTCTCCTGGAAGTAGGTCAATGGTGGACACTCCTCTCTCTGTTAGGAACTCTTT 467
Query 476 CGAGCCTCATCCGATGGTTGCTGAGGCTTGGGAAGCTTTGAGAAGGTCAATGGTGTTCTT 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 468 CGAGCCTCATCCGATGGTTGCTGAGGCTTGGGAAGCTTTGAGAAGGTCAATGGTGTTCTT 527
Query 536 TCGTGGTCAACCCGTTGGTACCATTGCAGCTTATGACCATGCCTCCGAGGAGGTCTTGAA 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 528 TCGTGGTCAACCCGTTGGTACCATTGCAGCTTATGACCATGCCTCCGAGGAGGTCTTGAA 587
Query 596 CTATGATCAGGTGTTCGTACGAGACTTTGTACCGAGTGCATTGGCATTTCTGATGAATGG 655
||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||
Sbjct 588 CTATGATCAGGTGTTTGTACGTGACTTTGTACCAAGTGCATTGGCGTTTCTGATGAATGG 647
Query 656 AGAGCCAGATATAGTGAAAAACTTCTTGCTCAAGACACTTCAGCTTCAAGGTTGGGAGAA 715
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 648 AGAGCCCGATATAGTGAAAAACTTCTTGCTCAAGACACTTCAGCTTCAAGGTTGGGAGAA 707
Query 716 ACGGGTTGACCGGTTCAAGCTCGGGGAAGGTGTTATGCCAGCGAGTTTCAAGGTGCTTCA 775
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 708 ACGGGTTGACCGGTTCAAGCTTGGGGAAGGCGTTATGCCAGCGAGTTTCAAGGTGCTTCA 767
Query 776 TGATCCAGTCCGTAAAACCGACACAATCGTTGCGGATTTCGGGGAAAGCGCTATAGGAAG 835
||||||||| ||||||||||||||||| |||||||||| || |||||||||||||||||
Sbjct 768 TGATCCAGTTCGTAAAACCGACACAATTATTGCGGATTTTGGAGAAAGCGCTATAGGAAG 827
Query 836 AGTAGCACCGGTGGATTCAGGATTCTGGTGGATCATACTTCTCCGCGCTTACACAAAATC 895
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 828 AGTAGCACCGGTGGATTCAGGATTCTGGTGGATCATACTTCTCCGTGCTTACACGAAATC 887
Query 896 TACCGGAGATTTGACTCTGTCTGAGACACCAGAGTGTCAGAGGGGAATGCGGCTTATACT 955
||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||
Sbjct 888 TACGGGAGATTTGACTTTATCTGAGACACCAGAGTGTCAGAGGGGAATGAGGCTTATACT 947
Query 956 CTCACTCTGCTTATCCGAAGGGTTTGACACTTTCCCTACACTGCTTTGTGCTGACGGTTG 1015
||| || |||||||||||||| ||||| ||||||||||| || |||||||||||||||||
Sbjct 948 CTCTCTTTGCTTATCCGAAGGTTTTGATACTTTCCCTACGCTTCTTTGTGCTGACGGTTG 1007
Query 1016 TTCTATGGTTGATAGAAGAATGGGTGTTTATGGATATCCGATAGAGATTCAAGCTCTGTT 1075
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1008 TTCTATGGTTGATAGGAGAATGGGTGTTTATGGATATCCAATAGAGATTCAAGCTCTGTT 1067
Query 1076 TTTCATGGCGCTGAGATGCGCCTTATCGATGCTTAAACCTGACGAGGAAGGTAGAGAGTT 1135
||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||| ||
Sbjct 1068 TTTCATGGCATTGAGATGCGCCTTGTCGATGCTTAAACCAGACGAGGAAGGTCGAGATTT 1127
Query 1136 CATAGAAAGAATTGTGAAGCGACTTCACGCGCTGAGTTTCCATATGCGCAGTTACTTTTG 1195
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1128 CATAGAAAGGATTGTGAAGAGACTTCACGCGCTGAGTTTCCATATGCGCAGTTACTTTTG 1187
Query 1196 GCTCGACTTTCAGCAACTCAATGATATCTACAGGTACAAGACGGAGGAGTACTCACACAC 1255
||| |||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||
Sbjct 1188 GCTTGACTTTCAACAACTCAACGATATCTATAGGTACAAGACAGAGGAGTACTCACACAC 1247
Query 1256 GGCGGTGAACAAATTCAACGTGATGCCGGACTCGATACCAGATTGGGTTTTTGACTTCAT 1315
||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct 1248 CGCGGTGAACAAGTTCAACGTGATGCCGGACTCGATACCAGACTGGGTTTTCGACTTTAT 1307
Query 1316 GCCTCTTCGTGGAGGATATTTTGTCGGCAATGTAAGCCCGGCCCGTATGGATTTTAGGTG 1375
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1308 GCCTCTCCGTGGAGGATATTTTGTCGGCAATGTAAGCCCGGCCCGTATGGATTTCAGGTG 1367
Query 1376 GTTTTCCTTAGGAAACTGTGTCTCTATCCTTTCTTCTCTAG-CAACTCCGGATCAGTCAA 1434
||||||||||||||| |||||||| ||||||||||| || | ||||||||||||||||||
Sbjct 1368 GTTTTCCTTAGGAAATTGTGTCTCCATCCTTTCTTC-CTTGGCAACTCCGGATCAGTCAA 1426
Query 1435 TGGCTATTATGGACCTCCTCGAGCACCGTTGGGAGGAGCTAGTAGGCGAGATGCCGCTTA 1494
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1427 TGGCTATTATGGACCTCCTCGAGCACCGTTGGGAGGAGCTAGTAGGCGAGATGCCGCTCA 1486
Query 1495 AGATATGCTACCCTTGCATTGAGAGCCACGAGTGGCGGATTGTCACTGGTTGTGATCCTA 1554
||||||| ||||||||||| || |||||||||||||||||||| || |||||||||||||
Sbjct 1487 AGATATGTTACCCTTGCATCGAAAGCCACGAGTGGCGGATTGTTACCGGTTGTGATCCTA 1546
Query 1555 AGAACACTAGGTGGAGCTACCACAACGGCGGATCTTGGCCAGTATTATTGTGGACGCTGA 1614
| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 1547 AAAACACGAGGTGGAGTTACCACAACGGTGGATCTTGGCCAGTATTGCTGTGGACGCTGA 1606
Query 1615 CAGCGGCATGCATCAAGACAGGCCGGCCTCAAATCGCGAGACGTGCGATTGATCTAATTG 1674
| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct 1607 CGGCGGCATGCATCAAGACTGGACGGCCTCAAATAGCGAGACGTGCGATTGATCTAATTG 1666
Query 1675 AATCACGGCTACACCGAGATTGCTGGCCGGAATACTATGATGGTAAGCAAGGAAGGTACG 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1667 AATCACGGCTACACCGAGATTGCTGGCCGGAATACTATGATGGTAAGCAAGGAAGGTACG 1726
Query 1735 TTGGAAAACAGGCTAGGAAATACCAGACTTGGTCAATCGCGGGTTACTTGGTTGCGAAGA 1794
|||||||||| || ||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 1727 TTGGAAAACAAGCAAGGAAGTACCAGACTTGGTCAATCGCGGGTTACTTGGTTGCGAAAA 1786
Query 1795 TGATGCTTGAAGATCCTTCACATATCGGAATGATCTCTCTTGAAGAAGATAAACAGATGA 1854
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 1787 TGATGCTTGAAGATCCTTCACATATTGGAATGATCTCTCTTGAAGAAGACAAACAGATGA 1846
Query 1855 AACCTGTTATCAAGAGATCTGCTTCTTGGACTTGCTGATTTTTGTTTCTTGTTTTGTATT 1914
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 1847 AACCTGTTATCAAGAGATCTGCTTCATGGACTTGCTGAATTTTGTTTCTTGTTTTGTATT 1906
Query 1915 ATAAATTTCATT--ATTAAG-AGTTGCAAAAGACCTTTAATCAGCCAGAGAATAGTTCTG 1971
|||| | ||||| |||||| | || ||||||||||||||||||| ||||| ||||||||
Sbjct 1907 ATAA-TGTCATTTGATTAAGCA-TT-CAAAAGACCTTTAATCAGCGAGAGAGTAGTTCTG 1963
Query 1972 TT-GCACTTCTCTTTGATCCAACTATGATTTATTTTAACTTGAGGCTTAATATAATCTCT 2030
|| | | |||||||||||||||||||| |||||||| ||||||||| |||||||||||||
Sbjct 1964 TTTGTATTTCTCTTTGATCCAACTATGGTTTATTTTCACTTGAGGCATAATATAATCTCT 2023
Query 2031 TTCTAGATC 2039
| |||||||
Sbjct 2024 TCCTAGATC 2032
> AT1G72000.1 | Symbols: | Plant neutral invertase family protein
| chr1:27103277-27105663 FORWARD LENGTH=1500
Length=1500
Score = 765 bits (414), Expect = 0.0
Identities = 1061/1371 (77%), Gaps = 54/1371 (4%)
Strand=Plus/Plus
Query 544 AACCCGTTGGTACCATTGCAGCTTATGACCATGCCTCCGAGGAGGTCTTGAACTATGATC 603
|||| || || ||||| || || || |||||||| || || |||||||||||||||||||
Sbjct 155 AACCGGTAGGAACCATCGCCGCCTACGACCATGCTTCAGAAGAGGTCTTGAACTATGATC 214
Query 604 AGGTGTTCGTACGAGACTTTGTACCGAGTGCAT-TGGCATTTCTGATGAATGGAGAGCCA 662
||||||||||||| || |||||||||||||| | | |||||||||||||||||||||||
Sbjct 215 AGGTGTTCGTACGTGATTTTGTACCGAGTGC-TCTAGCATTTCTGATGAATGGAGAGCCT 273
Query 663 GATATAGTGAAAAACTT-CTTGCTCAAGACACTTCAGCTTCAAGGTTGGGAGAAACGGGT 721
|| || ||||| ||||| || || ||||||||||| |||| || || ||| | |
Sbjct 274 GAAATTGTGAAGAACTTTCTC-CTGAAGACACTTCATATTCAGGGACAAGACAAAATGAT 332
Query 722 TGACCGGTTCAAGCTCGGGGAAGGTGTTATGCCAGCGAG-TTTCAAGGTGCTTCATGATC 780
||| ||||||||| || || || | |||||||| || ||| ||| | || ||| |||
Sbjct 333 CGACAAGTTCAAGCTTGGTGACGGCGCAATGCCAGCAAGCTTTAAAGTT-CTACATAATC 391
Query 781 C-AGTCC-GTAAAACCGACACAATCGTTGCGGA-TTTCGGGGAAAGCGCTATAGGAAGAG 837
| | || | || || || || || | || || ||| || |||||||| || || ||||
Sbjct 392 CTA-TCAAG-AAGACGGATACGATTATCGCTGACTTT-GGAGAAAGCGCCATCGGGAGAG 448
Query 838 TAGCACCGGTGGATTCAGGATTCTGGTGGATCATACTTCTCCGCGCTTACACAAAATCTA 897
| || || || || || || |||||||||||||| || ||||| |||||||| || ||||
Sbjct 449 TGGCTCCAGTCGACTCTGGCTTCTGGTGGATCATTCTCCTCCGAGCTTACACTAAGTCTA 508
Query 898 CCGGAGAT--TTGACTCT-GTCTGAGACACCAGAGTGTCAGAGGGGAATGCGGCTTATAC 954
| |||||| || |||| | | |||| ||||||||| || | ||||||| | || ||||
Sbjct 509 CAGGAGATCATT--CTCTAG-CAGAGAGACCAGAGTGCCAAAAGGGAATGAGACTCATAC 565
Query 955 TCTCACTCTG-CTTATCCGAAGGGTTT-GACACTTTCCCTACACTGCTTTGTGCTGACGG 1012
| || | || || || || |||||| || ||||| || || ||||||| || || ||
Sbjct 566 TTTCTTTGTGTCTC-TCTGA-GGGTTTTGATACTTTTCCGACTTTGCTTTGCGCAGATGG 623
Query 1013 TTGTTCTATGGTTGATAGAAGAATGGGTGTTTATGGATATCCGATAGAGATTCAAGCTCT 1072
||| || ||||| ||| | |||||||| |||| || |||||||| ||||| ||||| ||
Sbjct 624 TTGCTCGATGGTCGATCGTAGAATGGGCATTTACGGCTATCCGATTGAGATCCAAGCCCT 683
Query 1073 GTTTTTCATGGCGCTGAGATGCGC-CTTATCGATGCTTAAACCTGACGAGGAAGGTAGAG 1131
||||||||||| || ||| ||| || || ||||| |||| ||| || |||| ||
Sbjct 684 CTTTTTCATGGCTCTTCGATCCGCACTC-TCAATGCTGAAACATGATTCTGAGGGTAAAG 742
Query 1132 AGTTCATAGAAA-GAATTGTGAAGCGACTTCACGCGCTGAGTTTCCATATGCGCAGTTAC 1190
||||||| |||| || | |||||||| || ||||| || || ||||||||| | || |||
Sbjct 743 AGTTCATGGAAAAGA-TAGTGAAGCGGCTGCACGCACTAAGCTTCCATATGAGAAGCTAC 801
Query 1191 TTTTGGCTCGACTTTC-AGCAACTCAATGATATCTACAGGTACAAGACGGAGGAGTACTC 1249
||||||||||| |||| |||| |||||||| || ||| | ||||||||||||||||||||
Sbjct 802 TTTTGGCTCGA-TTTCCAGCAGCTCAATGACATTTACCGTTACAAGACGGAGGAGTACTC 860
Query 1250 ACACACGGCGGTGAACAAATTCAACGTGATGCCGGACTCGATACCAGATTGGGTTTTTGA 1309
||||| ||||| ||||| |||||||| || || ||||| || || |||||| | |||||
Sbjct 861 TCACACCGCGGTAAACAAGTTCAACGTAATCCCTGACTCCATCCCTGATTGGATCTTTGA 920
Query 1310 CTTCATGCCTCTTCGTGGAGGATATTTTGTCGGCAATGTAAG-CCCGGCCCGTATGGATT 1368
|||||||||||| || || || || || || || ||||| || |||| |||| ||||| |
Sbjct 921 CTTCATGCCTCTCCGAGGTGGCTACTTCGTTGGAAATGTCAGTCCCG-CCCGCATGGACT 979
Query 1369 TTAGGTGGTTTTCCTTAGGAAACTGTGTCTCTATCCTTTCTTC-TCTAGCAACTCCGGAT 1427
| ||||||||| | |||||||| ||| || | || ||||| || | | || || || ||
Sbjct 980 TCAGGTGGTTTGCGTTAGGAAATTGTATCGCAATTCTTTCCTCAT-TGGCCACACCAGAG 1038
Query 1428 CAGTCAATGGCTATTATGGACCTCCTCGAG-CACCGTTGGGAGGAGCTAGTAGGCGAGAT 1486
||||| ||||| || |||||||| | ||| | ||| ||||| || || || || |||||
Sbjct 1039 CAGTCCATGGCGATCATGGACCTGATTGAGGC-CCGGTGGGAAGAACTTGTGGGAGAGAT 1097
Query 1487 GCCGCTT-AAGATATGCTACCCTTGC-ATTGAGAGCCACGAGTGGCGGATTGTCACTGGT 1544
|||| || |||||||| || || || || ||||| ||||||||| |||||||||||||
Sbjct 1098 GCCG-TTGAAGATATGTTATCCG-GCGATGGAGAGTCACGAGTGGGGGATTGTCACTGGC 1155
Query 1545 TGTGATCCTAAGAACACTAGGTGGAGCTACCACAACGGCGGATCTTGGCCAGTA-TTATT 1603
||||| ||||||||||| |||||||||||||||||||| || ||||||||||| || |
Sbjct 1156 TGTGACCCTAAGAACACAAGGTGGAGCTACCACAACGGAGGCTCTTGGCCAGTGCTTCTA 1215
Query 1604 GTGGACGCTGACAGCGGCATGCATCAAGACAGGCCGGCCTCAAATCGCGA-GACGTGCGA 1662
||| || || |||||| |||| ||||| || ||||| ||||| || | |||| || |
Sbjct 1216 -TGGTTACTAACGGCGGCAAGCATAAAGACTGGACGGCCACAAATAGC-ACGACGGGCTA 1273
Query 1663 TTGA-TCTAATTGAATCACGGCTACACCGA-G-ATTGCTGGCCGGAATACTATGATGGTA 1719
| || | | || |||| || || | || | |||||||| ||||| || || |
Sbjct 1274 TAGAGT-TGGCGGAGGCACGACTGTT--GAAGGATGGATGGCCGGAGTACTACGACGGAA 1330
Query 1720 AG-CAAGGAAGGTACGTTGGAAAACAGGCTAGGAAATAC-CAGACTTGGTCAATCGCGGG 1777
|| | ||||| | | | ||||||||||||||||||| | ||||| ||||||||||| ||
Sbjct 1331 AGTCT-GGAAGATTCATCGGAAAACAGGCTAGGAAAT-CTCAGACATGGTCAATCGCTGG 1388
Query 1778 TTACTTGGTTGCGAAGATGATGCTTGAAGATCCTTCACATATCGGAATGATCTCTCTTGA 1837
|| ||||| || ||||||||| | || ||||| | ||| | ||||||||||| | ||
Sbjct 1389 CTATTTGGTCGCCAAGATGATGATGGATGATCCAACGCATGTGGGAATGATCTCAATGGA 1448
Query 1838 AGAAGATAAACAGATGAAACCTGTTATCAAGA-GATCTGCTTCTTGGACTT 1887
|||||| ||||| ||||||||| | | | || ||||| ||||||||||||
Sbjct 1449 AGAAGAGAAACATATGAAACCTCCTCTTA-GAAGATCTTCTTCTTGGACTT 1498
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101053697085
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5