BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489806 Length=1598 Score E Sequences producing significant alignments: (Bits) Value AT4G09520.1 | Symbols: | Cofactor-independent phosphoglycerate... 2303 0.0 AT3G30841.1 | Symbols: | Cofactor-independent phosphoglycerate... 1808 0.0 > AT4G09520.1 | Symbols: | Cofactor-independent phosphoglycerate mutase | chr4:6024896-6027055 REVERSE LENGTH=1652 Length=1652 Score = 2303 bits (1247), Expect = 0.0 Identities = 1473/1579 (93%), Gaps = 27/1579 (2%) Strand=Plus/Plus Query 1 AACGACACACGACGTCACGACAATTCTCAACTTT-GAGCTGCAGACACAATTCCGGCGAC 59 |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct 2 AACGACACACGACGTCACCACAATTCTCAACTTTGGAGCTGCAGACACAATTCCGGCGAC 61 Query 60 GATAACGATTCCAACGCCGCCGAAATCACTTGTGGCAAATGGAAGAAG-TCAAAAAGAGA 118 | | ||||||| || |||||||| ||||||| |||||||||||||| ||||||| ||| Sbjct 62 GTTTACGATTCTGACACCGCCGAACCCACTTGTAGCAAATGGAAGAAGTTCAAAAA-AGA 120 Query 119 GTTGCTTTTGTACTGATTGATGGTTTGGGAGATGTATCAATACCAAGATTAGGTTATAAA 178 ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 121 GTTGCCTTTATACTAATTGATGGTTTGGGAGATGTATCAATACCAAGATTAGGTTACAAA 180 Query 179 ACTCCATTACAAGCAGCA-AACATACCTAATCTTGATGCAATTGCTTCATCTGGAATCAA 237 || ||||| ||||||||| || |||||||| |||||||||||||||||| |||||||||| Sbjct 181 ACACCATTGCAAGCAGCAGAA-ATACCTAACCTTGATGCAATTGCTTCAGCTGGAATCAA 239 Query 238 TGGTTTAATGGATCCAGTTGAAGTTGGATTAGGTTGTGGTAGTGACACTGCTCATCTTTC 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 TGGTTTAATGGATCCAGTTGAAGTTGGATTAGGTTGTGGTAGTGACACTGCTCATCTTTC 299 Query 298 TCTAATGGGTTATGATCCAAGAGTGTATTACCGAGGTCGCGGTGCGTTTGAATCTATGGG 357 ||||||||||||||||||||||||||||||||| || || || ||||||||||||||||| Sbjct 300 TCTAATGGGTTATGATCCAAGAGTGTATTACCGTGGACGTGGCGCGTTTGAATCTATGGG 359 Query 358 TGCTGGATTAGCTATGTCACCAGGTGACATAGCTTTCAAGTCTAATTTTGCAACTTTGGA 417 ||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 360 TGCAGGATTAGCTATGTCACCTGGTGACATAGCTTTCAAGTCAAATTTTGCAACTTTGGA 419 Query 418 TGAGGATTCTGGAGTTGTTGTTAGTAGGAGAGCTGATCGACATTTCGAAGAAGAAGGACC 477 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 420 TGAGGATTCTGGAGTTGTTGTTAGTAGAAGAGCTGATCGACATTTCGAAGAAGAAGGACC 479 Query 478 GATACTTTGTGCTGCTCTTGATGGAATGAAGCTTCCTTCTTTCCCTGAGTATGAAGTTAG 537 ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 480 TATACTTTGTGCTGCTCTTGATGGAATGAAGCTTCCATCATTCCCTGAGTATGAAGTTAG 539 Query 538 AGTCAGATATGCAACGGAACATAGATGTGGAGTGGTTGTAAAAGGGCCAAGACTTAGTGG 597 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 540 AGTCAGATATGCAACGGAACATAGATGTGGAGTGGTTGTAAAAGGGCCAAAACTTAGTGG 599 Query 598 GAATATATCTGGAACAGACCCGTTGAAGGATAATCGTTTGCTTCTTGAAGCTAAACCTTT 657 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 600 GAATATATCTGGAACAGATCCATTGAAGGATAATCGTTTGCTTCTTGAAGCTAAACCTTT 659 Query 658 GGATGAATCAGAAGAAGCTAATCACACAGCTAAAGTCGTTAACGAATTATCCAGGGAGAT 717 |||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||| Sbjct 660 GGATGAATCAGAAGAAGCTAATCACACAGCCAAAGTCGTGAACGAATTATCCCGGGAGAT 719 Query 718 ATCGCGCATTCTTGTTTCTCATCCGGTTAATGTAAAGAGAGCTGCACAAGGAAAGAATAT 777 |||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||| Sbjct 720 ATCGCGCATTCTTGTTTCCCACCCGGTTAATGTAAAGAGAGCTGCACAAGGCAAGAATAT 779 Query 778 TGCCAATCTTGTCCTTTTAAGAGGCTGTGGTATTCGAATCGAGGTTCCTCCTTTTCATGA 837 ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 780 TGCTAATCTTGTTCTTTTAAGAGGCTGTGGTATTCGAATCGAGGTTCCTCCTTTTCACGA 839 Query 838 GAAGCACGGTTTGTGGCCGTGTATGGTAGCACCAACGAAGATTATAGCCGGACTTGGTAT 897 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 840 GAAGCATGGTTTGTGGCCGTGTATGGTAGCACCAACGAAGATTATAGCCGGACTTGGTAT 899 Query 898 GTCCCTTGGTATTGACATTCTAGAAGCTCCGGGAGCCACTGGAGATTACCGGACACTTCT 957 ||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||| Sbjct 900 GTCCCTTGGTATTGATATTCTTGAAGCTCTGGGAGCCACTGGAGATTACCGGACGCTTCT 959 Query 958 CACATCAAAAGCAATTGCTATAGCCAATGCGCTTTCAGCTCCTTTGAATCCCTGCCCAAA 1017 |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 960 CACATCGAAAGCGATTGCTATAGCGAATGCGCTTTCAGCTCCTTTGAATCCCTGCCCAAA 1019 Query 1018 TGTCTTTGATCCAGCAGAAGACGGGCATAAACCGGGAAGGTCAGATGGTTACGATTTTGG 1077 ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 1020 TGTCTTTGAACCAGCAGAGGACGGGCATAAACCGGGAAGGTCAGATGGTTACGATTTCGG 1079 Query 1078 ATTCCTTCACATAAAGGCTATAGATGATGCAGGTCATGACAAGGCAACATTGTTCAAAGT 1137 ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1080 CTTCCTTCACATTAAGGCTATAGATGATGCAGGTCATGACAAGGCTACATTGTTCAAAGT 1139 Query 1138 CCGAGGCTTGGAAGCTGTGGATAAGGCGATACGTCAGCTCGCTAAGCTTCTATGGCATGC 1197 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 1140 TCGAGGCTTGGAAGCTGTGGATAAAGCGATACGTCAGCTCGCTAAGCTTCTATGGCAAGC 1199 Query 1198 CGAATCTTCTTCAAATTACCAGTATTTCTTGTGTGTGACTGGTGATCATTCTACTCCAGT 1257 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1200 TGAATCTTCTTCAAATTACCAGTATTTCTTGTGTGTGACTGGTGATCATTCTACTCCAGT 1259 Query 1258 TGAGTATGGAGACCACAGCTTCGAGCCTGTCCCATTTACAATGTGCCGGCTAAAGGACTT 1317 |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 1260 TGAGTATGGAGACCACAGCTTCGAGCCTGTCCCATTCACAATGTGCCGGTTAAAGGACTT 1319 Query 1318 TGTGAGCGCGGTTGGAGGAGAATCAGC-CTTATTAGAGACGTCGTTGGACCCTTTTCCAC 1376 |||||| |||||||||||||||||||| || ||||||||| || || ||||||||||||| Sbjct 1320 TGTGAGAGCGGTTGGAGGAGAATCAGCTCT-ATTAGAGACATCTTTAGACCCTTTTCCAC 1378 Query 1377 TTCCAACG-A-AT-G--TC-ACTGAAA----CA--G-AA--GAAGAAGACG---GTGGGA 1418 |||||||| | || | || | ||||| || | || |||||||| | |||||| Sbjct 1379 TTCCAACGGATATAGCATCCAGTGAAAATGTCATCGGAAAAGAAGAAGAAGACTGTGGGA 1438 Query 1419 AGAAGGAAGCTCCT-TCGGCGATTAGTGGAGACTCAGTCTCAGAATTGAATGAGATTGCA 1477 || ||||||| || | ||||||||||||||| ||||||||||| ||||| ||||||||| Sbjct 1439 GGAGGGAAGCTTCTCT-GGCGATTAGTGGAGATTCAGTCTCAGAGTTGAACGAGATTGCA 1497 Query 1478 TCTGCAAGAGGATGTCTTGGCCGTTTCCATGGTGGTGAAATGATGGGAGTCATCACCAAG 1537 |||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 1498 GCTGCAAGAAGATGTCTTGGCCGTTTCCATGGCGGTGAAATGATGGGAGTTATCACCAAG 1557 Query 1538 TTTCTTAAGCTAGATGTAT 1556 ||||| ||| | ||||||| Sbjct 1558 TTTCTGAAGTTGGATGTAT 1576 > AT3G30841.1 | Symbols: | Cofactor-independent phosphoglycerate mutase | chr3:12591392-12593527 FORWARD LENGTH=1722 Length=1722 Score = 1808 bits (979), Expect = 0.0 Identities = 1317/1480 (89%), Gaps = 24/1480 (2%) Strand=Plus/Plus Query 98 ATGGAAGAAGTCAAAAAGAGAGTTGCTTTTGTACTGATTGATGGTTTGGGAGATGTATCA 157 ||| || |||||||||||||||| |||||||| || || |||||||| ||||||||| || Sbjct 122 ATGTAA-AAGTCAAAAAGAGAGTAGCTTTTGTTCTAATCGATGGTTTAGGAGATGTAACA 180 Query 158 ATACCAAGATTAGGTTATAAAACTCCATTACAAGCAGCAAACATACCTAATCTTGATGCA 217 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct 181 ATACCAAAACTAGGTTACAAAACTCCATTACAAGCAGCAAACATACCTAATCTCGACGCA 240 Query 218 ATTGCTTCATCTGGAATCAATGGTTTAATGGATCCAGTTGAAGTTGGATTAGGTTGTGGT 277 ||||| ||| |||| ||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct 241 ATTGCATCAGCTGGTATCAACGGTTTAATGGATCCAGTAGAAGTTGGTTTAGGTTGTGGT 300 Query 278 AGTGACACTGCTCATCTTTCTCTAATGGGTTATGATCCAAGAGTGTATTACCGAGGTCGC 337 ||||||||||||||||||||||| |||||||||||||||||||| |||||||| || || Sbjct 301 AGTGACACTGCTCATCTTTCTCTCATGGGTTATGATCCAAGAGTATATTACCGTGGACGT 360 Query 338 GGTGCGTTTGAATCTATGGGTGCTGGATTAGCTATGTCACCAGGTGACATAGCTTTCAAG 397 ||||| ||||| ||||||||||| || |||||||||||||| ||||| |||||||||||| Sbjct 361 GGTGCTTTTGAGTCTATGGGTGCAGGTTTAGCTATGTCACCTGGTGATATAGCTTTCAAG 420 Query 398 TCTAATTTTGCAACTTTGGATGAGGATTCTGGAGTTGTTGTTAGTAGGAGAGCTGATCGA 457 |||||||||||||||||||||||| | |||||||||||||||||| | |||||||||||| Sbjct 421 TCTAATTTTGCAACTTTGGATGAGAAATCTGGAGTTGTTGTTAGTCGAAGAGCTGATCGA 480 Query 458 CATTTCGAAGAAGAAGGACCGATACTTTGTGCTGCTCTTGATGGAATGAAGCTTCCTTCT 517 ||||||||||||||||| || ||||||||||| ||||||||||| | ||||||| ||| Sbjct 481 CATTTCGAAGAAGAAGGTCCTATACTTTGTGCAGCTCTTGATGGGTTAAAGCTTCAATCT 540 Query 518 TTCCCTGAGTATGAAGTTAGAGTCAGATATGCAACGGAACATAGATGTGGAGTGGTTGTA 577 ||||||||||||||||| |||||||||||||| ||||||||| | ||||| || ||||| Sbjct 541 TTCCCTGAGTATGAAGTGAGAGTCAGATATGCGACGGAACATCGGTGTGGTGTTGTTGTT 600 Query 578 AAAGGGCCAAGACTTAGTGGGAATATATCTGGAACAGACCCGTTGAAGGATAATCGTTTG 637 |||||||||||||||||||||||||||||||| || || |||||||| |||||||||||| Sbjct 601 AAAGGGCCAAGACTTAGTGGGAATATATCTGGCACTGATCCGTTGAAAGATAATCGTTTG 660 Query 638 CTTCTTGAAGCTAAACCTTTGGATGAATCAGAAGAAGCTAATCACACAGCTAAAGTCGTT 697 |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||| ||| Sbjct 661 CTTCTTGAAGCTAAACCTTTAGATGAATCAGAAGAAGCTACTCACACTGCTAAAGTTGTT 720 Query 698 AACGAATTATCCAGGGAGATATCGCGCATTCTTGTTTCTCATCCGGTTAATGTAAAGAGA 757 ||||||||||| || ||||||||||| |||||||||||||| |||||||| | | ||||| Sbjct 721 AACGAATTATCAAGAGAGATATCGCGTATTCTTGTTTCTCACCCGGTTAACGCAGAGAGA 780 Query 758 GCTGCACAAGGAAAGAATATTGCCAATCTTGTCCTTTTAAGAGGCTGTGGTATTCGAATC 817 ||||||||||| ||||||||||| ||||| || |||||| | || ||||||||||||||| Sbjct 781 GCTGCACAAGGCAAGAATATTGCAAATCTCGTTCTTTTACGTGGTTGTGGTATTCGAATC 840 Query 818 GAGGTTCCTCCTTTTCATGAGAAGCACGGTTTGTGGCCGTGTATGGTAGCACCAACGAAG 877 ||||| |||||||||||||||||||| || |||||||| ||||||||||||||||| ||| Sbjct 841 GAGGTACCTCCTTTTCATGAGAAGCATGGCTTGTGGCCATGTATGGTAGCACCAACAAAG 900 Query 878 ATTATAGCCGGACTTGGTATGTCCCTTGGTATTGACATTCTAGAAGCTCCGGGAGCCACT 937 |||||||| |||||||||||||| || |||||||||||| |||||||||||||||| ||| Sbjct 901 ATTATAGCTGGACTTGGTATGTCGCTCGGTATTGACATTTTAGAAGCTCCGGGAGCTACT 960 Query 938 GGAGATTACCGGACACTTCTCACATCAAAAGCAATTGCTATAGCCAATGCGCTTTCAGCT 997 |||||||||||||| ||||| ||||| ||||||| ||||||||| ||||| || |||||| Sbjct 961 GGAGATTACCGGACGCTTCTGACATCGAAAGCAACTGCTATAGCTAATGCTCTCTCAGCT 1020 Query 998 CCTTTGAATCCCTGCCCAAATGTCTTTGAT-CCAGCAGAAGACGGGCATAAACCGGGAAG 1056 ||||||||||||||||| |||||||||| | || | ||| |||||||||||||| ||||| Sbjct 1021 CCTTTGAATCCCTGCCCTAATGTCTTTG-TACCGGGAGAGGACGGGCATAAACCAGGAAG 1079 Query 1057 GTCAGATGGTTACGATTTTGGATTCCTTCACATAAAGGCTATAGATGATGCAGGTCATGA 1116 |||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1080 GTCAGATGGTTATGATTTCGGGTTCCTTCACATAAAGGCTATAGATGATGCAGGTCATGA 1139 Query 1117 CAAGGCAACATTGTTCAAAGTCCGAGGCTTGGAAGCTGTGGATAAGGCGATACGTCAGCT 1176 ||||| ||| |||||||||| ||||| || |||||||| |||||||||||||||||||| Sbjct 1140 TAAGGCGACAATGTTCAAAGTTCGAGGTTTAGAAGCTGTTGATAAGGCGATACGTCAGCT 1199 Query 1177 CGCTAAGCTTCTATGGCATGCCGAATCTTCTTCAAATTACCAGTATTTCTTGTGTGTGAC 1236 ||||||||| ||||||| || || |||||| || ||||||||||||||||||||||||| Sbjct 1200 TGCTAAGCTTTTATGGCAAGCTGAGTCTTCTACACATTACCAGTATTTCTTGTGTGTGAC 1259 Query 1237 TGGTGATCATTCTACTCCAGTTGAGTATGGAGACCACAGCTTCGAGCCTGTCCCATTTAC 1296 ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| || Sbjct 1260 CGGTGATCATTCAACTCCTGTTGAGTATGGAGACCACAGCTTTGAGCCTGTCCCATTCAC 1319 Query 1297 AATGTGCCGGCTAAAGGACTTTGTGAGCGCGGTTGGAGGAGAATCAGCCTTATTAGAGAC 1356 |||||||||| ||| |||||||||||||||||| ||||||||||||||| || ||||||| Sbjct 1320 AATGTGCCGGTTAAGGGACTTTGTGAGCGCGGTGGGAGGAGAATCAGCCGTACTAGAGAC 1379 Query 1357 GTCGTTGGACCCTTTTCCACTTCCAACGAATGTC-A--C---TGAA-A-----C-AGA-A 1402 ||| |||||||||||||||||||||||| ||| | | |||| | | | | | Sbjct 1380 GTCTTTGGACCCTTTTCCACTTCCAACGGTTGTGGAATCAGGTGAAGATGTTACCAAACA 1439 Query 1403 -GAAGAAGACG-GTGGGAAGAAGGAAGCTCCT-TCGGCGATTAGTGGAGACTCAGTCT-C 1458 || ||||| | |||||| || |||||||||| | ||| ||| ||||||| | ||| | | Sbjct 1440 AGAGGAAGA-GAGTGGGAGGAGGGAAGCTCCTCT-GGCAATTGGTGGAGATTTAGT-TGC 1496 Query 1459 AGAATTGAATGAGATTGCATCTGCAAGAGGATGTCTTGGCCGTTTCCATGGTGGTGAAAT 1518 ||| ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct 1497 AGAGTTGAATGAGGTTGCAGCTGCAAGAGGATGTCTTGGCCGTTTCCATGGCGGTGAAAT 1556 Query 1519 GATGGGAGTCATCACCAAGTTTCTTAAGCTAGATGTATGA 1558 ||||||||||||||| || |||||||| ||||| |||||| Sbjct 1557 GATGGGAGTCATCACTAACTTTCTTAATCTAGAGGTATGA 1596 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78915256740 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5