BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489859
Length=3443
Score E
Sequences producing significant alignments: (Bits) Value
AT4G10120.1 | Symbols: ATSPS4F | Sucrose-phosphate synthase fam... 5419 0.0
AT1G04920.1 | Symbols: ATSPS3F, SPS3F | sucrose phosphate synth... 176 1e-42
> AT4G10120.1 | Symbols: ATSPS4F | Sucrose-phosphate synthase family
protein | chr4:6314789-6319936 FORWARD LENGTH=3457
Length=3457
Score = 5419 bits (2934), Expect = 0.0
Identities = 3267/3428 (95%), Gaps = 22/3428 (1%)
Strand=Plus/Plus
Query 23 TAAAAAGAAAAAGGAGGGACCTTTTGTATGAGATTATAAAATGGCAAAGCTAAGTTGATA 82
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 34 TAAAGAGAAAAAGGAGGGACCTTTTGTATGAGATTATAAAAT-GCAAAGCTAAGTTGATA 92
Query 83 TACAAAACTAGGCCTCTCTCTTCTACCCTGA-AGGAGATTCGGAGTTTTCAGTGCAACAA 141
|||||||||||| | |||||||| ||||| | || || |||| ||| |||||||||
Sbjct 93 TACAAAACTAGG-C-CTCTCTTCCACCCT-ATAGCTGA--AGGAG-ATTC-GTGCAACAA 145
Query 142 TCAGAGAGATGGCGAGAAATGATTGGATCAACAGTTACCTGGAAGCTATTCTTGATGTTG 201
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 146 TCAGAGAGATGGCAAGAAATGATTGGATAAACAGTTACCTGGAAGCTATTCTTGATGTTG 205
Query 202 GAACTAGCAACAAAAAGAGGTTTGAGAGCAACTCCAAGATCGTCCAGAAGCTTGGAGATA 261
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 206 GAACTAGCAAGAAAAAGAGGTTTGAGAGCAACTCCAAGATCGTCCAGAAGCTTGGAGATA 265
Query 262 TGAATAGGAATAATCATCAAGACAAGGTGTTTGGAGATATGAATAGCAAGGATCATCATC 321
| || || || ||||||| || ||||||||||||||||||||| | |||| ||||||
Sbjct 266 TCAACAGTAAGGATCATCAGGAGAAGGTGTTTGGAGATATGAATGGGAAGG---ATCATC 322
Query 322 AAGAAAAGGTGTTTAGTCCCATCAAATACTTTGTTGAAGAGGTTGTCAACAGTTTCGATG 381
|||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 323 AAGAGAAGGTGTTTAGTCCCATCAAATACTTTGTGGAAGAGGTCGTCAACAGTTTCGATG 382
Query 382 AGTCTGACCTGTATAAAACATGGATTAAGGTGATAGCAACAAGGAATACTCGTGAACGCA 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 383 AGTCTGACCTGTATAAAACATGGATTAAGGTGATAGCAACAAGGAATACTCGTGAACGCA 442
Query 442 GTAACAGGCTTGAGAATATATGCTGGCGTATTTGGCATCTCGCACGCAAGAAAAAGCAGA 501
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 443 GTAACAGGCTTGAGAATATATGCTGGCGCATTTGGCATCTCGCACGCAAGAAAAAGCAGA 502
Query 502 TTGTGTGGGATGACGGGATTAGACTTTCCAAACGGAGAATCGAACGTGAACAAGGCCGCA 561
||||||||||||||||| |||||||||||||||| ||||| |||||||||||||| ||||
Sbjct 503 TTGTGTGGGATGACGGGGTTAGACTTTCCAAACGAAGAATTGAACGTGAACAAGGTCGCA 562
Query 562 ATGATGCGGAAGAGGATCTTCTTTCTGAGCTTTCTgaaggagaaaaggagaagaatgacg 621
||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| |
Sbjct 563 ATGATGCAGAAGAGGATCTTCTTTCTGAGCTTTCTGAAGGAGAGAAGGATAAGAATGATG 622
Query 622 gagagaaagagaagaatgaagTTGTTACAACTCTCGAACCACCCCGAGATCACATGCCCC 681
||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 623 GAGAGAAGGAGAAGAGTGAAGTTGTTACAACTCTCGAACCACCTCGAGATCACATGCCCC 682
Query 682 GTATCCGCTCTGAAATGCAAATTTGGTCAGAAGATGATAAATCAAGTCAAAACCTTTATA 741
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 683 GTATCCGCTCTGAAATGCAAATTTGGTCAGAAGATGATAAATCAAGTCGAAACCTTTACA 742
Query 742 TTGTCCTAATCAGTATGCATGGACTCGTGCGTGGAGAAAACATGGAGCTTGGAAGAGACT 801
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 743 TTGTCTTAATCAGCATGCATGGACTCGTGCGTGGAGAAAACATGGAGCTTGGAAGAGACT 802
Query 802 CTGATACTGGTGGACAGGTGAAATATGTTGTTGAGCTTGCTCGTGCCTTGGCCAACACTG 861
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 803 CTGATACTGGTGGGCAGGTGAAATATGTTGTTGAGCTTGCTCGTGCGTTGGCCAACACTG 862
Query 862 AAGGAGTCCACAGGGTCGATCTCTTAACACGGCAGATCAGTTCACCAGAGGTTGACTACA 921
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 863 AAGGTGTCCACAGGGTCGATCTCTTAACACGGCAGATCAGTTCACCAGAGGTTGACTACA 922
Query 922 GCTACGGCGAGCCAGTTGAGATGTTATCATGCCCTCCAGAAGGTAGCGACAGCTGTGGCT 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 923 GCTACGGCGAGCCAGTTGAGATGTTATCATGCCCTCCAGAAGGTAGCGACAGCTGTGGCT 982
Query 982 CCTACATTATTCGCATCCCCTGCGGTTCTCGGGACAAGTACATACCAAAGGAGTCACTCT 1041
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 983 CCTACATTATCCGCATCCCCTGTGGTTCTCGGGACAAGTACATACCAAAGGAGTCACTCT 1042
Query 1042 GGCCCCATATTCCCGAGTTTGTTGATGGGGCGCTAAATCACATAGTGAGCATAGCAAGAT 1101
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1043 GGCCCCATATTCCCGAGTTTGTTGACGGGGCGCTAAATCACATAGTGAGCATAGCAAGGT 1102
Query 1102 CTCTGGGAGAGCAAGTGAATGGAGGGAAACCAATCTGGCCTTATGTAATTCATGGCCACT 1161
| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1103 CGCTAGGAGAGCAAGTGAATGGAGGGAAACCAATATGGCCTTATGTAATTCATGGCCACT 1162
Query 1162 ATGCTGATGCAGGAGAAGTAGCTGCACATTTGGCAGGAGCGTTAAATGTGCCAATGGTGC 1221
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1163 ATGCTGATGCAGGAGAAGTAGCTGCACATTTGGCAGGAGCGTTAAATGTGCCAATGGTTC 1222
Query 1222 TAACTGGTCATTCTTTGGGAAGGAATAAGTTTGAGCAGTTGCTTCAACAAGGGAGAATTA 1281
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1223 TAACTGGTCACTCTTTGGGAAGGAATAAGTTTGAGCAGTTGCTTCAACAAGGGAGAATTA 1282
Query 1282 CCAGAGAGGATATTGACAGAACATATAAGATCATGAGGAGGATAGAAGCTGAAGAACAGA 1341
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1283 CCAGAGAGGATATTGACAGAACATATAAGATCATGAGGAGAATAGAAGCTGAAGAACAGA 1342
Query 1342 GCCTTGATGCAGCCGAGATGGTGGTGACAAGCACACGACAAGAGATTGAGGCGCAGTGGG 1401
|||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1343 GCCTAGATGCAGCGGAGATGGTGGTGACAAGCACACGACAAGAGATTGACGCGCAGTGGG 1402
Query 1402 GGCTGTATGATGGTTTTGATATCAAGCTGGAGAGGAAGCTCAGGGTTAGACGACGGCGTG 1461
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1403 GGCTGTATGATGGTTTTGATATCAAGCTGGAGAGGAAGCTCAGGGTTAGAAGACGGCGTG 1462
Query 1462 GAGTCAGCTGCCTTGGCCGATACATGCCACGAATGGTGGTTATACCGCCAGGCATGGATT 1521
|||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 1463 GAGTCAGCTGCCTTGGTAGATACATGCCACGAATGGTGGTTATACCCCCAGGCATGGATT 1522
Query 1522 TCAGCTACGTCTTGACACAGGATTCACAGGTACCTGATGGTGATCTTAAGTCACTAATTG 1581
||||||| ||||||||||| |||||||||| ||| ||||||||||||||||| |||||||
Sbjct 1523 TCAGCTATGTCTTGACACAAGATTCACAGGAACCCGATGGTGATCTTAAGTCGCTAATTG 1582
Query 1582 GCCCTGACCGAAACCAGATAAAAAAGCCTGTGCCTCCAATATGGTCTGAGATAATGCGAT 1641
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct 1583 GCCCTGACCGAAACCAGATAAAAAAGCCTGTGCCTCCAATATGGTCCGAGATAATGAGAT 1642
Query 1642 TTTTCTCAAATCCTCATAAACCAACAATACTTGCGCTGTCTCGTCCTGACCACAAGAAAA 1701
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1643 TTTTCTCAAATCCTCATAAACCAACCATACTTGCGCTGTCTCGTCCTGACCACAAGAAAA 1702
Query 1702 ATGTCACCACATTGGTCAAAGCTTTTGGTGAATGTCAGCCTCTTCGAGAACTAGCCAACC 1761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ATGTCACCACATTGGTCAAAGCTTTTGGTGAATGTCAGCCTCTTCGAGAACTAGCCAACC 1762
Query 1762 TGGTACTTATATTAGGTAACAGAGATGACATCGAAGAGATGCCTAATAGCAGCTCAGTTG 1821
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1763 TGGTACTTATACTAGGTAACCGAGATGACATCGAAGAGATGCCTAATAGCAGCTCAGTTG 1822
Query 1822 TTCTCATGAACGTACTAAAGCTGATAGACCAGTATGACTTGTACGGCCAAGTAGCTTATC 1881
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1823 TTCTCATGAATGTACTAAAGCTGATAGACCAGTACGACTTGTACGGCCAAGTAGCTTATC 1882
Query 1882 CCAAGCATCACAAACAATCTGAAGTTCCAGATATTTATCGTTTAGCAGCCAAAACAAAGG 1941
| |||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct 1883 CAAAGCATCATAAACAATCTGAAGTTCCAGATATTTACCGCTTAGCAGCCAAAACTAAGG 1942
Query 1942 GGGTCTTCATTAATCCAGCTCTTGTGGAGCCGTTTGGTCTCACGCTCATTGAGGCAGCTG 2001
|||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1943 GGGTTTTCATCAATCCAGCTCTGGTGGAGCCGTTTGGTCTCACGCTCATTGAGGCAGCTG 2002
Query 2002 CTTATGGTCTGCCCATTGTTGCCACCAGAAATGGAGGGCCTGTTGATATCGTGAAGGCAC 2061
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2003 CTTATGGTCTGCCCATTGTTGCCACCAGAAATGGAGGGCCTGTTGATATTGTGAAGGCAC 2062
Query 2062 TAAATAATGGTCTCCTAGTCGACCCCTATGATCAACAAGCTATTTCTGCTGCCCTTCTAA 2121
|||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||
Sbjct 2063 TAAATAATGGTCTCCTAGTCGACCCCCATGACCAACAAGCCATTTCTGATGCCCTTCTAA 2122
Query 2122 AGCTAGTTGCTAACAAACATCTCTGGGCTGAGTGTAGAAAAAACGGACTCAAGAACATCC 2181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2123 AGCTAGTTGCTAACAAACATCTCTGGGCTGAGTGTAGAAAAAACGGACTCAAGAACATCC 2182
Query 2182 ACCGTTTTTCATGGCCAGAGCACTGCCGTAACTATCTATCCCATGTCGAACACTGCAGAA 2241
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 2183 ACCGTTTTTCATGGCCAGAGCACTGCCGTAACTACCTATCCCATGTCGAACATTGCAGAA 2242
Query 2242 ACCGTCACCCCACCAGTAGTCTCGACATCATGAAAGTTCCAGAAGAGCTCACAAGTGATT 2301
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2243 ACCGTCACCCTACCAGTAGTCTCGACATCATGAAAGTTCCAGAAGAGCTCACAAGTGATT 2302
Query 2302 CTCTAATG-GATGTCGACGACATATCTTTGAGATTCTCCACAGAAGGAGATTTCACGCTC 2360
||||| | |||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 2303 CTCTAC-GAGATGTCGATGACATATCTTTGAGATTCTCCACAGAAGGAGATTTCACTCTC 2361
Query 2361 AACGGGGAACTAGATGCAGGTACTAGACAGAGGAAACTAGTTGATGCTATAAGTCAAATG 2420
||||| ||||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||
Sbjct 2362 AACGGAGAACTAGATGCAGGTACCAGACAGAAGAAACTAGTCGATGCCATAAGTCAAATG 2421
Query 2421 AATTCTATGAAAGGTCGCCCATCTGTTATCTACAGCCCTGGTAGAAGGCAGATGCTCTTT 2480
||||| ||||||||| || || ||| ||||||||||||||||||||||||||||||||||
Sbjct 2422 AATTCAATGAAAGGTTGCTCAGCTGCTATCTACAGCCCTGGTAGAAGGCAGATGCTCTTT 2481
Query 2481 GTGGTTGCTGTTGATTCATATGATGACAACGGAAACATCAAAGCAAATTTGGACGATATC 2540
||||||||||||||||| |||||||||||||||||||||||||| |||||| |||| |||
Sbjct 2482 GTGGTTGCTGTTGATTCCTATGATGACAACGGAAACATCAAAGCGAATTTGAACGAAATC 2541
Query 2541 ATCAAGGATGTGATGAAAGTTGCAGATTTGACATCGGGCAAAGGGAAAATAGGTTTTGTG 2600
|||||| || |||| |||| |||||||||||||||||| ||||| |||||||||||||||
Sbjct 2542 ATCAAGAATATGATAAAAGCTGCAGATTTGACATCGGGTAAAGGAAAAATAGGTTTTGTG 2601
Query 2601 CTGGCATCAGGTTCAAGCTTACAAGAAGTTGTGGAGATCACGCAGAAAAACCTGATTAAT 2660
|| || ||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 2602 CTAGCCTCAGGTTCAAGCTTACAAGAAGTTGTGGATATTACGCAGAAAAACCTGATTAAT 2661
Query 2661 TTGGAAGATTTTGATGCAATAGTTTGCAACAGCGGAAGTGAAATCTACTATCCATGGAGA 2720
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2662 CTGGAAGATTTTGATGCAATAGTTTGCAACAGCGGAAGTGAGATCTACTATCCATGGAGA 2721
Query 2721 GATATGATGGTTGATGCAGACTATGAAACTCATGTGGAATACAAATGGCCTGGTGAAAGT 2780
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2722 GATATGATGGTTGATGCAGACTACGAAACTCATGTGGAATACAAATGGCCTGGTGAAAGT 2781
Query 2781 ATAAGGTCGGTTATTCTGCGACTTGCATGTACGGAACCTGCAACTGAGGATGACATCACA 2840
||||||||||| |||||| ||||| |||||||||||||||| |||||||||| ||||||
Sbjct 2782 ATAAGGTCGGTGATTCTGAGACTTATATGTACGGAACCTGCAGCTGAGGATGATATCACA 2841
Query 2841 GAGTATGCTAGTGCATGCAGTACAAGATGCTATGCAATTTCTGTGAAACAAAGAGTCAAG 2900
|||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2842 GAGTATGCGAGTTCATGCAGTACAAGATGCTATGCAATTTCTGTGAAACAAGGAGTCAAG 2901
Query 2901 ACTCGAAGAGTAGATGACCTTAGGCAGAGGCTTCGGATGCGAGGTTTAAGGTGCAACATT 2960
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2902 ACTCGAAGAGTCGATGACCTTAGGCAGAGGCTTCGGATGAGAGGTTTAAGGTGCAACATT 2961
Query 2961 GTCTATACGCATGCAGCAACAAGGCTAAATGTTATACCACTATGTGCATCAAGAATACAA 3020
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2962 GTCTATACTCATGCAGCAACAAGGCTAAATGTTATACCACTATGTGCATCAAGAATACAA 3021
Query 3021 GCACTCAGGTATCTTTCTATAAGGTGGGGGATTGACATGTCGAAGACTGTTTTCTTTTTG 3080
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3022 GCACTCAGGTATCTTTCTATAAGGTGGGGAATTGACATGTCGAAGACTGTTTTCTTTTTG 3081
Query 3081 GGAGA-AAAGGGAGACACAGACTATGAGGACTTACTGGGTGGCCTCCACAAAACCATCAT 3139
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3082 GGAGAGAAAGG-AGACACAGACTATGAGGACTTACTGGGTGGCCTCCACAAAACCATCAT 3140
Query 3140 TCTAAAAGGTGTAGTGGGATCTGACAGTGAGAAGCTTCTTCGCAGTGAAGAAAATTTCAA 3199
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 3141 TCTAAAAGGTGTAGTGGGATCAGACAGTGAGAAGCTTCTTCGCAGTGAAGAAAACTTCAA 3200
Query 3200 AAGAGAAGACGCAGTTCCACAAGAGAGCCCTAACATTTCCTATGTCAAAGAGAATGGCGG 3259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3201 AAGAGAAGACGCAGTTCCACAAGAGAGCCCTAACATTTCCTATGTCAAAGAGAATGGCGG 3260
Query 3260 ACCTCAGGAAATTCTGTCCACTTTAGAGGCCTATGGGATCAAGTAATAAGTTTCTATTTC 3319
| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3261 ATCTCAGGAAATTATGTCCACTTTAGAGGCCTATGGGATCAAGTAATAATTTTCTATTTC 3320
Query 3320 AGCTTATTATCTCA-GATCATATACTTCAATGG-TTCGTAAACAGTGAAAA--TAACAAA 3375
|||||||||||||| |||||||||||||||||| || |||||||||||||| ||||||
Sbjct 3321 AGCTTATTATCTCAAGATCATATACTTCAATGGGTTGGTAAACAGTGAAAAAATAACAAG 3380
Query 3376 ACTACACACTTTCATATATTGTATACCGCAATAAAAAAGAGTTGAATATTAACTTTTCTT 3435
|||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| |||
Sbjct 3381 ACTACATACTTTCATATATTGTATACCGAAATAAAAAAG--TTGAATATTAACTTTGCTT 3438
Query 3436 AGTACAGA 3443
|||| |||
Sbjct 3439 AGTATAGA 3446
> AT1G04920.1 | Symbols: ATSPS3F, SPS3F | sucrose phosphate synthase
3F | chr1:1391502-1395864 REVERSE LENGTH=3469
Length=3469
Score = 176 bits (95), Expect = 1e-42
Identities = 984/1394 (71%), Gaps = 138/1394 (10%)
Strand=Plus/Plus
Query 735 CTTTATATTGTCCTAATCAGTATGCATGGACTCGTGCGTGGAGAAAACATGGAGCTTGGA 794
||||| ||||||| |||||| ||||||| | || |||||||||||||||||||||||
Sbjct 616 CTTTACGTTGTCCTCATCAGTTTGCATGGGTTGGTTCGTGGAGAAAACATGGAGCTTGGT 675
Query 795 AGAGACTCTGATACTGGTGGACAGGTGAAATATGTTGTTGAGCTTGCTCGTGCCTTGGCC 854
|| || || ||||||||||||||||||||||||||||| ||||| ||||| || || ||
Sbjct 676 AGCGATTCCGATACTGGTGGACAGGTGAAATATGTTGTGGAGCTAGCTCGAGCTTTAGCG 735
Query 855 A-ACACTGAA-GGAGTCCACAGGGTCGATCTCTTAACACGGCAGATCA-GTTCACCAGAG 911
| | | || || || || | || ||||| || || || ||||| | | ||| ||||
Sbjct 736 AGA-A-TGCCTGGTGTGTACCGAGTTGATCTGTTTACTCGCCAGAT-ATGCTCATCAGAA 792
Query 912 GTTGACTACAGCTACGGC-GAGCCAGTTGAGATGTTATC-A-TGCCCTCCAGAAGGT-A- 966
||||| | ||||| | | |||||| |||||| || | | ||| | ||| || |
Sbjct 793 GTTGATTGGAGCTATG-CAGAGCCAACGGAGATGCTAACCACTGC--TGAAGATTGTGAT 849
Query 967 G-CGAC-AG-CTGTGGCT--C--CT-A-CAT-TAT--TC-GCATCCCCTGCGGTTCTCGG 1013
| ||| | | | || | | | ||| ||| | | || || | ||| | |||
Sbjct 850 GGCGATGAAACCGGGGAAAGCAGCGGAGCATATATCATTAGGATACCGTTTGGTCCACGG 909
Query 1014 GACAAGTACATAC-CAAAG-GAGTCACTCTGGCCCCATATTCCC-GAGTTTGTTGATGGG 1070
|| |||||| || ||||| || || ||||||| | | || ||||||||||||||
Sbjct 910 GATAAGTACTTAAACAAAGAGATTC--TCTGGCCGTTTGT-CCAAGAGTTTGTTGATGGA 966
Query 1071 GCGCTAAATCACATAGTGAGCATAG-CAAGA-TCTCTGGGAGAGCAAGTGAATGG-A-GG 1126
|| || |||||| | | ||| | ||| | | | |||||||||| | | ||| | ||
Sbjct 967 GCTTTAGCTCACATTCTAAACAT-GTCAAAAGTTT-TGGGAGAGCA-G--ATTGGGAAGG 1021
Query 1127 GAAA-CCAATCTGGCCTTATGTAATTCATGGCCACTATGCTGATGCAGGAGA-AGTAGCT 1184
| || || | ||||| ||||| |||||||| || || || |||||||| || ||| ||
Sbjct 1022 GGAAGCCTGTGTGGCCATATGTGATTCATGGACATTACGCGGATGCAGGGGATAGT-GCC 1080
Query 1185 GCACA--TTTGGCAGGAGCGTTAAATGTGCCAATGGTGCTAACTGGTCATTCTTTGGGAA 1242
|| | ||| | || ||||| || || || ||||| || || ||||||||| | ||||
Sbjct 1081 GCTCTGCTTT--CTGGTGCGTTGAACGTTCCTATGGTCCTGACGGGTCATTCTCTAGGAA 1138
Query 1243 GGAATAAGTTTGAGCAG-TTGCTTCAA-CAAGGGAG--AATTACCAGAGAGGATATTGAC 1298
| || ||| |||||||| || || || |||||||| ||| | || |||||||| |
Sbjct 1139 GAAACAAGCTTGAGCAGCTT--TTGAAACAAGGGAGGCAATCAA-AG-GAGGATATAAAT 1194
Query 1299 AGAACATATAAGATCATGAGGAGGATAGAAGCTGAAGAACAGAGC-CTTGATGCAGCCGA 1357
||||||||||||| ||||||||| || || || || | | | || ||||| || ||
Sbjct 1195 TCCACATATAAGATCAAGAGGAGGATCGAGGCCGAGGAGCT-ATCTCTGGATGCTGCAGA 1253
Query 1358 GATGGTGGTGACAAGCAC-ACGACAAGAGATTGAGGCGCAGTGGGGGCTGTATGATGGTT 1416
| | || | |||||||| | | || |||||||| | |||||||| || |||||||| |
Sbjct 1254 GCTTGTTATAACAAGCACGAGG-CAGGAGATTGATGAACAGTGGGGACTTTATGATGGGT 1312
Query 1417 TTGATATCAAGCTGGAGAGGAAG-CTC-AGGGTTAGA-CGACGGCGTGGAGTCAGCTGCC 1473
| ||| | || || |||| ||| || || | | | | | | || || || | ||||
Sbjct 1313 TCGATGTAAAACTCGAGA--AAGTCTTGAGAGCTCGTGCTA-GACGCGGTGTTAATTGCC 1369
Query 1474 TTGGCCGATACATGCCACGAATGGTGGTTATACCGCCAGGCATGGATTTCAGCTA-CGTC 1532
|| | | ||||||| |||||| |||||| || || || |||||||||| | | |||
Sbjct 1370 ACGGAAGGTTCATGCCAAGAATGGCGGTTATTCCTCCGGGGATGGATTTCA-CAAACGT- 1427
Query 1533 TTGACA--CA-G--GATTCACAGGTACC-TGATGGTGATCTTAAG-T-CACTAATT-GGC 1583
| || || | ||| ||| | | |||||| ||| ||| | | | || | | ||
Sbjct 1428 T-GAGGTTCAAGAAGATACACCTG-AGGGTGATGGAGAT-TTA-GCTTC-CTTAGTAGGA 1482
Query 1584 CCTGA-CCGAA--ACCAGATAAAAAAGCCTGTGCCTCCAATATGGTCTGA-GATAATGCG 1639
|| |||| | | | ||||| || || | || |||||||| | || || |
Sbjct 1483 G--GAACCGAGGGATCTTCTCCTAAAGCG-GTTCCAACTATCTGGTCTGAAGTTA-TGAG 1538
Query 1640 ATTTTTCT-CAAATCCTCATAAACCAACAATACTTGCGC-TG-TCTCGTCCTGACCACAA 1696
||||| | |||||||||| ||||| | || |||| || | ||| | || |||| |||
Sbjct 1539 GTTTTT-TACAAATCCTCACAAACCTATGAT-CTTG-GCATTATCTAGACCAGACC-CAA 1594
Query 1697 -GAAAAATGTCACCACA-TTGGTCAAAGCTTTTGGTGAATGTCAGCCTCTTCGAGAACTA 1754
||| || | ||||| || | ||||| ||||| ||||||| |||||| || || |||
Sbjct 1595 AGAAGAACATAACCACTCTTC-TGAAAGCCTTTGGCGAATGTCGGCCTCTACGGGAGCTA 1653
Query 1755 GCCAACCTGGTACTTAT-ATTA-GGTAA--CAGAGATGACATCGAAGAGATG-C--CT-- 1805
|| || || |||| | |||| || || | ||||||| || || ||| || | ||
Sbjct 1654 GCTAATCTC--ACTT-TGATTATGGGAAATC-GAGATGATATAGATGAGTTGTCATCTGG 1709
Query 1806 AATAGCAGCTCAGTTGTTCTCATGAAC-GTACT--AAAGCTGATAGACCAGTATGA-CTT 1861
|| | | ||| || ||||| | ||| || || ||| || || ||| | ||||| |||
Sbjct 1710 AA-A-C-GCT-AGC-GTTCTTAC-AACCGT-CTTGAAA-CTCATCGACAAATATGATCTT 1761
Query 1862 GTACGGC-CAAGTAGCTTATCCCAAGCATCACAAACAATCTGAAGTTCCAGATATTTATC 1920
||||| | || || ||||| |||||||| ||||| ||||| ||||| ||||| || |
Sbjct 1762 -TACGGGTCT-GTCGCATATCCAAAGCATCATAAACAGTCTGATGTTCCTGATATATACC 1819
Query 1921 GT-TTAGCAGCCAAA-ACAAAGGGGGTCTTCATTAATCCAGCTCTTG-TGGAGCCGTTTG 1977
| || || || ||| |||||||| || ||||| ||||||||| ||| | ||||| ||||
Sbjct 1820 GACTT-GCTGC-AAATACAAAGGGTGTTTTCATAAATCCAGCT-TTGGTTGAGCCTTTTG 1876
Query 1978 GTCTCACGCTCATTGAGGCAGCTGCTTATGGTCTGCCCATTGTTGCCACCA-GAAATGGA 2036
| || || ||||||||||| || ||| | || || || || || || || | ||| ||||
Sbjct 1877 GCCTTACACTCATTGAGGCTGCAGCTCACGGACTTCCGATGGTAGCAACAAAGAA-TGGA 1935
Query 2037 GGGCCTGTTGATAT 2050
|| || ||||||||
Sbjct 1936 GGACCAGTTGATAT 1949
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 171370277288
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5