BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489910 Length=978 Score E Sequences producing significant alignments: (Bits) Value AT4G10630.1 | Symbols: | Glutaredoxin family protein | chr4:65... 1094 0.0 > AT4G10630.1 | Symbols: | Glutaredoxin family protein | chr4:6566625-6567629 REVERSE LENGTH=1005 Length=1005 Score = 1094 bits (592), Expect = 0.0 Identities = 882/1015 (87%), Gaps = 47/1015 (5%) Strand=Plus/Plus Query 1 ATGGGTTGCGTCTCATCTAACCTCTTGAATCC-CGACGAAGACTTCCCTCAAATCGGCGG 59 |||||||||||||||||||||||| | || || ||||||||||||| ||||||||||||| Sbjct 1 ATGGGTTGCGTCTCATCTAACCTCCT-AAACCACGACGAAGACTTCTCTCAAATCGGCGG 59 Query 60 TGGCAGCTCCGCCTTCGGCCACCACATCGTCAAACTAACCTCCACCACTTACGGTCTTCT 119 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct 60 TGGAAGCTCCGCCTTCGGTCACCACATCGTCAAACTAACCTCCACCACTTATGGTCTTCT 119 Query 120 CACACTCGA--C-CCTCCTCCTCCTTCCTCCGCCGCAT-TCTCCTCC-GATAATATGCCT 174 ||||||||| | ||||||||||||| |||| || || | || || || || || | Sbjct 120 CACACTCGATCCTCCTCCTCCTCCTT-CTCCTCC-TATGACGCCGCCGGAGAA-AT-TC- 174 Query 175 ATGACGCCGCCGGATAAATCTAAGTCATTGTGGTCTGAGCCAAGATTAATCAAGTCTGAG 234 | | | || | |||||||||||| | |||||||||||||| | || ||||| || Sbjct 175 A-CA-GTCGATACA-AAATCTAAGTCAATATGGTCTGAGCCAAGGGTGATAAAGTCGGAA 231 Query 235 CCGGAGATTATTAACTCTTGGGAGCTAATGTCAGGCCTCGACGGAGAGAGTTTCCGATTC 294 |||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| Sbjct 232 CCGGAGATTATTAACTCTTGGGAGTTAATGTCTGGTCTCGACGGAGAGAGTTTCCGATTC 291 Query 295 ACGCCACTACCGAAGACTCCGGTAAAGTATAAAGTCTTTGGCGGTGA-AAGCAAAGAGAA 353 |||||||| || ||||||||||| ||||||||||| ||||| || || || ||||||||| Sbjct 292 ACGCCACTTCCTAAGACTCCGGTGAAGTATAAAGTGTTTGGTGGAGAGAA-CAAAGAGAA 350 Query 354 TTCGGATCCTAATCGGAGAAACCCTAGAAAAATCTTGAACGACGAAGTTTTAAAACCGCT 413 ||| ||||||| |||||||||||||||||||| |||||||||||| ||||| |||||||| Sbjct 351 TTCAGATCCTAGTCGGAGAAACCCTAGAAAAAACTTGAACGACGAGGTTTTGAAACCGCT 410 Query 414 AGATC----C---GA--ATTCGGATCCTAATTTGAGAAACCCTAG-AAA--G--T----C 455 ||||| | || |||||||| |||||| ||||| |||||| ||| | | | Sbjct 411 AGATCTGAACAGAGAGGATTCGGATTCTAATTCGAGAAGCCCTAGAAAATCGTTTAAACC 470 Query 456 GTTAGATCTGAAATTGGATGAGAAATTTGAGAGGATTTGTCCTCCGGGAGGAGAGAATCG 515 ||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 471 GTTAGATTTGAAATTGGATGAGAAATTTGAGAGGATTTGTCCACCAGGAGGAGAGAATCG 530 Query 516 TGTGGTGATGTACACGACGTCCTTGCGCGGTGTTCGTTGGACGTTTGAGGCGTGTAATGC 575 ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| || Sbjct 531 TGTGGTGATGTACACGACGTCGTTGCGAGGTGTTCGTCAAACGTTTGAGGCGTGTAACGC 590 Query 576 TGTGAGAGCGGCGGTGGAGAGTTTTGGTGTTGTGGTTTGTGAGAGAGATGTGTCGATGGA 635 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 591 TGTGAGAGCGGCGGTGGAGAGTTTTGGTGTTGTGGTTTGCGAGAGAGATGTGTCGATGGA 650 Query 636 TAGAGGGTTTAGGGAAGAGCTTGTGAGTCTAATGGCGAAGGGAGTTAAGGAAGATGGAGT 695 |||| ||||||| ||||||||||||||||||||||||||| ||||| ||| || ||||| Sbjct 651 TAGAAGGTTTAGAGAAGAGCTTGTGAGTCTAATGGCGAAGAGAGTTGGGGATGAGGGAGT 710 Query 696 GGCTGCATTGCCGCCTCGGGTTTTTGTGAAGGGAATGTATATTGGTGGAGTAGAGGAAGT 755 ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||| Sbjct 711 GGCTGCATTGCCGCCTCGGGTTTTTGTGAAGGGAAGGTACATTGGTGGAGGAGAGGAAGT 770 Query 756 GTTGAGACTAGTTGAGGAAGGTTCTTTCGGAGAACTGATCCGTGGGATACCGAGAAAGAA 815 ||||||||||||||||||||||||||||||||| |||||| | ||||| ||||||||||| Sbjct 771 GTTGAGACTAGTTGAGGAAGGTTCTTTCGGAGAGCTGATCAGCGGGATTCCGAGAAAGAA 830 Query 816 AGCGG-A---TG-GTG--CT-----TGTGATGGATGCGGTGGTATGTTTTTCTTGCCGTG 863 ||||| | || | | | |||||||| ||||| ||| |||||||||||||||| Sbjct 831 AGCGGGAGGATGCGAGAGCGGCGCGTGTGATGGTTGCGGCGGTTTGTTTTTCTTGCCGTG 890 Query 864 TTTTCGGTGTGATGGAAGCTGTAAAATGGTGAAAGGATGGGGTAGTGCCGCCGTCGTTGT 923 |||||||||| ||||||||||||| ||||||||||||||||||||||| | || ||||| Sbjct 891 TTTTCGGTGTAATGGAAGCTGTAAGATGGTGAAAGGATGGGGTAGTGCTTCGGTGGTTGT 950 Query 924 GAGATGTTCGGAGTGTAACGAGAACGGTCTTGTTCCATGTCCGATTTGCAGCTGA 978 ||||||| |||||||| ||||| ||||||||||||||||| |||||||| ||| Sbjct 951 GAGATGTAATGAGTGTAATGAGAATGGTCTTGTTCCATGTCCTATTTGCAGTTGA 1005 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47873142091 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5