BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489922
Length=2483
Score E
Sequences producing significant alignments: (Bits) Value
AT4G10770.1 | Symbols: ATOPT7, OPT7 | oligopeptide transporter ... 3986 0.0
> AT4G10770.1 | Symbols: ATOPT7, OPT7 | oligopeptide transporter
7 | chr4:6628404-6632599 REVERSE LENGTH=2625
Length=2625
Score = 3986 bits (2158), Expect = 0.0
Identities = 2364/2465 (96%), Gaps = 8/2465 (0%)
Strand=Plus/Plus
Query 1 GAAGAAGACTAGAAGATAGC-TTGACAGATTCACATCT-CaaaaaaaaaaaaCAGAGCaa 58
|||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||||||
Sbjct 1 GAAGAAGACTAGAAGATAGCTTTGTCAGATTCACATCTCCCCAAAAAAAAAACAGAGCAA 60
Query 59 gaagaagaagaagaagaCAACCATGGAAGAATCAGAACTAGTTCTTCCTCTATTAACAAA 118
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 61 GAAGAAGAAGAAGAAGACAACCATGGAAGAATCAGAACAAGTTCTTCCTCTATTAACAAA 120
Query 119 CCCCAAAGATCTGACAAACCAATCCTCTGCCTCATCATCTTCA---TCATCGGAACCAAG 175
||| |||||||||||||||| ||| | ||| |||||||||||| ||||| ||||||||
Sbjct 121 CCCAAAAGATCTGACAAACCCATCATATGCGTCATCATCTTCATCTTCATCTGAACCAAG 180
Query 176 AGATGAAACAGAGGATCTTCTTTTACCAATCTCCG--GCgaa-gaagaagaagaagaaga 232
||||||||||||||||||||||||||||||||||| | ||| || || |||||||||||
Sbjct 181 AGATGAAACAGAGGATCTTCTTTTACCAATCTCCGACGAGAATGAGGAGGAAGAAGAAGA 240
Query 233 gaaCTCACCAATCCGACAAGTAGCACTCACTGTTCCAACAACAGACGATCCTTCATTACC 292
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 241 GAACTCACCAATCCGACAAGTAGCACTCACTGTTCCGACAACAGATGATCCTTCATTACC 300
Query 293 TGTCTTAACATTTCGCATGTGGGTCTTAGGAACTCTTTCTTGCATCCTCTTGTCGTTTCT 352
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 301 TGTCTTAACATTTCGCATGTGGGTCTTAGGAACTCTCTCTTGCATCCTCTTGTCGTTTCT 360
Query 353 CAATCAGTTCTTCTGGTACAGAACAGAACCTCTCACTATCTCCGCCATCTCCGCTCAAAT 412
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 361 CAATCAGTTCTTCTGGTATAGAACAGAACCTCTCACTATCTCTGCCATCTCCGCTCAAAT 420
Query 413 CGCCGTCGTACCCCTCGGTCGTCTCATGGCTGCTAAAATCTCTGATAGAGTCTTCTTCCA 472
|||||||||||| || |||||||||||||||||||||||| | |||||||||||||||||
Sbjct 421 CGCCGTCGTACCACTTGGTCGTCTCATGGCTGCTAAAATCACCGATAGAGTCTTCTTCCA 480
Query 473 AGGATCAAAGTGGCAATTCACGTTGAATCCAGGACCGTTTAATGTGAAGGAGCATGTGTT 532
||||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||
Sbjct 481 AGGATCAAAGTGGCAGTTTACGTTGAATCCAGGTCCGTTTAATGTGAAAGAGCATGTGTT 540
Query 533 GATCACTATTTTCGCTAACGCCGGAGCTGGATCTGTTTACGCAATACACGTTGTTACCGT 592
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 541 GATCACTATTTTCGCTAACGCGGGAGCTGGATCTGTTTACGCAATACACGTTGTTACCGT 600
Query 593 CGTGAAAGCGTTTTACATGAAGAACATAACGTTCTTTGTGTCTTTCATCGTTATTGTTAC 652
|| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 601 GGTCAAAGCGTTTTACATGAAGAACATAACGTTCTTTGTGTCTTTCATCGTTATCGTTAC 660
Query 653 CACTCAAGTGTTAGGTTTTGGTTGGGCCGGAATATTCAGGAAATACCTCGTTGAACCGGC 712
||| ||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||
Sbjct 661 CACCCAAGTGTTAGGTTTTGGATGGGCTGGAATATTTAGGAAATACCTTGTTGAACCGGC 720
Query 713 GGCGATGTGGTGGCCGGCGAATCTTGTTCAAGTCTCACTATTTAGAGCTTTGCACGAAAA 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 721 GGCGATGTGGTGGCCGGCGAATCTTGTTCAAGTCTCACTATTTAGAGCTTTGCACGAGAA 780
Query 773 AGAAGAACGGACCAAAGGAGGGCTGACACGTACACAATTCTTCGTGATAGCATTCGTTTG 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 AGAAGAACGGACCAAAGGAGGGCTGACACGTACACAATTCTTCGTGATAGCATTCGTTTG 840
Query 833 CAGTTTCGCTTATTATGTCTTTCCAGGCTACTTATTTCAGATCATGACGTCGTTGTCGTG 892
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 841 CAGTTTCGCTTATTATGTCTTTCCGGGCTACTTATTTCAGATCATGACGTCGTTGTCGTG 900
Query 893 GGTTTGTTGGTTCTTTCCATCATCAGTTATGGCCCAACAGATCGGGTCCGGTCTTCACGG 952
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 901 GGTTTGTTGGTTCTTTCCATCATCAGTTATGGCCCAACAGATCGGGTCTGGTCTTCACGG 960
Query 953 GTTAGGTGTTGGAGCCATAGGACTCGACTGGTCAACCATTTCTTCTTACTTGGGTAGTCC 1012
|||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 961 GTTAGGTGTTGGGGCCATAGGACTTGACTGGTCAACCATTTCCTCTTACTTGGGTAGTCC 1020
Query 1013 ACTCGCTAGTCCATGGTTTGCAACGGCTAATGTGGGTGTGGGATTTGTGCTGGTGATATA 1072
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1021 ACTCGCTAGTCCATGGTTTGCTACGGCTAATGTGGGTGTGGGATTTGTGCTGGTGATATA 1080
Query 1073 TGTCTTGGTACCAATATGCTATTGGCTCGATGTGTATAAGGCTAAAACCTTCCCTATATT 1132
|||||||||||||||||||||||||||||||||||| ||||| || |||||||| |||||
Sbjct 1081 TGTCTTGGTACCAATATGCTATTGGCTCGATGTGTACAAGGCCAAGACCTTCCCCATATT 1140
Query 1133 TTCGAGCTCGCTTTTTACGAGCCAGGGTTCAAAGTACAACATCACATCCATTATAGACTC 1192
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 TTCGAGCTCACTTTTTTCGAGCCAGGGTTCAAAGTACAACATCACATCCATTATAGACTC 1200
Query 1193 TAATTTCCACCTTGACCTCCCATCTTACGAGCGTGAAGGCCCTTTGTATCTTTGCACTTT 1252
|||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||
Sbjct 1201 TAATTTCCACCTTGACCTCCCAGCCTACGAGCGTCAAGGCCCTTTGTATCTTTGCACTTT 1260
Query 1253 CTTCGCAATTAGTTACGGTGTTGGTTTTGCCGCTTTAAGCGCTACCATCATGCATGTTGC 1312
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 CTTCGCCATTAGTTACGGTGTTGGTTTTGCCGCTTTAAGCGCTACCATCATGCATGTTGC 1320
Query 1313 TCTCTTCCATGGAAGGGAGATATGGGAGCAAAGTAAGGAGAGTTTTAAGGAAAAGAAATT 1372
||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1321 TCTCTTCCACGGAAGGGAGATATGGGAGCAGAGTAAGGAGAGTTTTAAAGAAAAGAAATT 1380
Query 1373 GGATGTACACGCGAGGCTAATGCAAAGGTACAAACAAGTTCCAGAGTGGTGGTTTTGGTG 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1381 GGATGTACACGCGAGGCTAATGCAAAGGTACAAACAAGTTCCAGAGTGGTGGTTTTGGTG 1440
Query 1433 CATACTCGTTACCAATGTTGGAGCCACAATCTTTGCTTGTGAGTATTACAATGACCAACT 1492
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 CATACTCGTTACCAACGTTGGAGCCACAATCTTTGCTTGTGAGTATTACAATGACCAACT 1500
Query 1493 TCAATTACCATGGTGGGGTGTTCTATTGGCATGTACCGTCGCCATTATCTTTACACTTCC 1552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1501 TCAATTACCATGGTGGGGTGTTCTATTGGCATGTACCGTCGCCATTATCTTTACACTTCC 1560
Query 1553 TATCGGTATCATCACCGCCATCACCAACCAGGCACCAGGATTGAACATAATTACAGAATA 1612
||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||
Sbjct 1561 TATCGGTATCATCACCGCCATCACCAATCAGGCGCCAGGATTGAACATTATTACAGAATA 1620
Query 1613 TATCATAGGATATATCTATCCAGGGTATCCAGTGGCAAATATGTGCTTTAAAGTATATGG 1672
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1621 TATCATAGGATATATCTATCCAGGATATCCAGTTGCAAATATGTGCTTTAAAGTATATGG 1680
Query 1673 ATACATAAGTATGCAACAAGCCATCACTTTTCTTCAAGACTTCAAACTTGGTCACTACAT 1732
||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||
Sbjct 1681 ATACATAAGCATGCAACAAGCCATCACGTTTCTTCAAGACTTTAAGCTTGGTCACTACAT 1740
Query 1733 GAAGATTCCACCTAGAACCATGTTCATGGCACAGATTGTTGGAACACTCATCTCATGTTT 1792
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1741 GAAGATACCACCTAGAACCATGTTCATGGCACAGATTGTTGGAACACTCATCTCATGTTT 1800
Query 1793 GGTTTACCTCACAACGGCTTGGTGGCTAATGGAGACAATCCCCAACATATGTGATTCGGT 1852
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1801 TGTTTACCTCACAACGGCTTGGTGGCTAATGGAGACCATCCCCAACATATGTGATTCGGT 1860
Query 1853 TTCTAACTCGGTATGGACTTGTCCATCCGATAAAGTCTTCTATGATGCATCCGTGATATG 1912
| |||||||||| ||||| |||||||| ||||||||||| ||||||||||| ||||||||
Sbjct 1861 TACTAACTCGGTTTGGACATGTCCATCGGATAAAGTCTTTTATGATGCATCGGTGATATG 1920
Query 1913 GGGACTTATTGGACCTCGTAGAATCTTTGGAGATCTTGGTTTATACAAATCCGTTAATTG 1972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1921 GGGACTTATTGGACCTCGTAGAATCTTTGGAGATCTTGGTTTATACAAATCCGTTAATTG 1980
Query 1973 GTTCTTCCTTGTCGGCGCTATAGCCCCGGTTCTTGTATGGTTAGCTTCAAGGATGTTTCC 2032
|||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1981 GTTCTTCCTTGTGGGCGCTATAGCCCCTATTCTTGTATGGTTAGCTTCAAGGATGTTTCC 2040
Query 2033 TAGACAAGAGTGGATCAAGCTTATAAACATGCCGGTTCTTATAAGCGCGACAAGCTCGAT 2092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2041 TAGACAAGAGTGGATCAAGCTTATAAACATGCCGGTTCTTATAAGCGCGACAAGCTCGAT 2100
Query 2093 GCCACCCGCAACAGCCGTGAACTACACAACATGGGTTCTTGCCGGATTTTTATCCGGATT 2152
||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 2101 GCCGCCCGCAACAGCCGTGAACTACACAACATGGGTTCTTGCTGGATTCTTATCCGGATT 2160
Query 2153 TGTTGTGTTTAGGTACAGGCCAAATCTATGGCAGAGGTATAATTATGTTTTGTCAGGAGC 2212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2161 TGTTGTGTTTAGGTACAGGCCAAATCTATGGCAGAGGTATAATTATGTTTTGTCAGGAGC 2220
Query 2213 ATTGGATGCTGGATTAGCATTTATGGGTGTGTTGCTTTATATGTGTTTGGGACTTGAGAA 2272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 ATTGGATGCTGGATTAGCATTTATGGGTGTGTTGCTTTATATGTGTTTGGGACTTGAGAA 2280
Query 2273 TGTGAGTTTGGATTGGTGGGGAAATGAGCTTGATGGTTGTCCTTTGGCCTCTTGTCCTAC 2332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2281 TGTGAGTTTGGATTGGTGGGGAAATGAGCTTGATGGTTGTCCTTTGGCCTCTTGTCCAAC 2340
Query 2333 CGCGCCTGGTATTATTGTTGAAGGTTGCCCGCTTTATACGTAAAACGTATTTGCGAGGCG 2392
|||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||
Sbjct 2341 CGCGCCTGGTATTATTGTTGAAGGATGCCCGCTTTATACGTAAAACGCGTTTGCGCGGCG 2400
Query 2393 AAGGCATTTTCAATGCTAGAGTTTGGTCGCTGGATTTGGTGCATCTGTTTGTAAAAATCA 2452
||||||||| |||||||| |||||||| | |||||||||| | | |||||||||| ||||
Sbjct 2401 AAGGCATTTCCAATGCTAAAGTTTGGTGGTTGGATTTGGTACCTATGTTTGTAAAGATCA 2460
Query 2453 TTTTT 2457
|||||
Sbjct 2461 TTTTT 2465
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123210012008
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5