BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489969
Length=3190
Score E
Sequences producing significant alignments: (Bits) Value
AT4G11380.2 | Symbols: | Adaptin family protein | chr4:6920489... 4279 0.0
AT4G23460.1 | Symbols: | Adaptin family protein | chr4:1224367... 3049 0.0
> AT4G11380.2 | Symbols: | Adaptin family protein | chr4:6920489-6925576
FORWARD LENGTH=3002
Length=3002
Score = 4279 bits (2317), Expect = 0.0
Identities = 2557/2673 (96%), Gaps = 15/2673 (1%)
Strand=Plus/Plus
Query 126 GGATAAGAGAAAAGATGCAGTTAAGAAGGTTATTGCGGCGATGACTGTGGGGAAGGATGT 185
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 272 GGATAAGAGAAAAGATGCAGTTAAGAAGGTTATTGCGGCGATGACTGTTGGAAAGGATGT 331
Query 186 TTCATCACTTTTCACTGATGTAGTCAATTGTATGCAAACGGAAAATTTGGAGTTGAAGAA 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 332 TTCATCACTTTTCACTGATGTAGTCAATTGTATGCAAACGGAAAATTTGGAGTTGAAGAA 391
Query 246 GCTTGTTTACTTGTATCTCATAAATTATGCGAAAAGTCAGCCAGATCTTGCTATTCTTGC 305
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 392 GCTTGTTTACTTGTATCTCATAAATTATGCGAAAAGCCAGCCAGATCTTGCTATTCTTGC 451
Query 306 AGTAAATACTTTTGTAAAGGATTCACAGGATCCAAATCCACTGATTCGAGCTTTGGCTGT 365
||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 452 AGTAAATACCTTTGTAAAGGATTCACAGGATCCAAATCCGCTGATTCGTGCTTTGGCTGT 511
Query 366 GCGGACAATGGGCTGCATTCGTGTTGATAAAATCACAGAATATCTATGTGATCCTCTTCA 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 512 GCGGACAATGGGCTGCATTCGTGTTGATAAAATCACAGAATATCTATGTGATCCTCTTCA 571
Query 426 AAAGTGCCTAAAGGATGATGATCCATATGTCCGGAAGACAGCAGCTATTTGCGTTGCTAA 485
||||||||||||||||||||| ||||||||| ||||||| || ||||||||||| |||||
Sbjct 572 AAAGTGCCTAAAGGATGATGACCCATATGTCAGGAAGACTGCGGCTATTTGCGTCGCTAA 631
Query 486 GCTTTTTGACATAAATGCTGAATTGGTGGAGGATAGGGGTTTCCTTGAAGCCTTGAAAGA 545
|||||| ||||||||||||||||| || ||||| || |||||||||||||||||||| ||
Sbjct 632 GCTTTTCGACATAAATGCTGAATTAGTTGAGGACAGAGGTTTCCTTGAAGCCTTGAAGGA 691
Query 546 TTTGATATCAGACAACAATCCGATGGTTGTTGCCAATGCTGTAGCAGCCCTTGCAGAGAT 605
|||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 692 TTTGATATCAGATAACAATCCAATGGTTGTTGCCAATGCTGTAGCAGCCCTTGCGGAGAT 751
Query 606 TCAAGAGAATAGTACTAGCCCCATATTTGAGATCAATAGTACAACCCTTACAAAGCTCCT 665
||||||||| |||| ||||||||| ||||||||||||||||| || ||||||||||||||
Sbjct 752 TCAAGAGAACAGTAGTAGCCCCATCTTTGAGATCAATAGTACCACTCTTACAAAGCTCCT 811
Query 666 TACCGCTCTAAATGAATGCACTGAGTGGGGTCAAGTTTTTATATTAGATGCTTTATCGAG 725
||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 812 TACTGCTCTAAATGAATGCACTGAGTGGGGTCAAGTTTTTATACTAGATGCTTTATCGAA 871
Query 726 GTATAAAGCAGCTGATCCCCGTGAAGCTGAAAATATTGTTGAGAGAGTCACACCAAGGTT 785
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 872 GTATAAAGCAGCTGATCCCCGTGAGGCTGAAAATATTGTTGAGAGAGTAACACCAAGGTT 931
Query 786 ACAACATGCCAACTGCGCTGTTGTGCTTTCAGCTGTTAAGATGATCCTTCAACAAATGGA 845
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 932 GCAACATGCCAACTGCGCTGTTGTTCTTTCAGCTGTTAAGATGATCCTTCAACAAATGGA 991
Query 846 ACTTATCACTAGTACAGACGTGATTCGAAATCTTTGCAAGAAGATGGCTCCACCCCTTGT 905
|||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 992 ACTTATTACTAGTACAGACGTGATTAGAAATCTTTGTAAGAAGATGGCTCCACCCCTTGT 1051
Query 906 TACATTGCTTTCTGCCGAACCTGAGATACAATATGTTGCACTTCGTAACATTAATCTTAT 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1052 TACATTGCTTTCTGCCGAACCTGAGATACAATATGTTGCACTTCGTAACATTAATCTTAT 1111
Query 966 TGTGCAAAAACGACCCACTATCCTTGCCCATGAAATTAAGGTTTTCTTCTGCAAGTATAA 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1112 TGTGCAAAAACGACCCACTATCCTTGCCCATGAAATTAAGGTTTTCTTCTGCAAGTATAA 1171
Query 1026 CGACCCGATTTATGTTAAGATGGAGAAGTTGGAGATTATGATTAAACTTGCCTCTGACAG 1085
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1172 CGACCCAATTTATGTTAAGATGGAGAAGTTGGAGATTATGATTAAACTTGCCTCTGACAG 1231
Query 1086 AAACATAGACCAGGTTCTTCTTGAATTCAAAGAGTATGCCACGGAAGTAGACGTTGATTT 1145
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1232 AAACATAGACCAGGTTCTTCTGGAATTCAAAGAGTATGCCACAGAAGTAGACGTTGATTT 1291
Query 1146 TGTTAGAAAGGCTGTTCGTGCCATAGGCCGATGTGCTATCAAACTAGAGAGAGCAGCTGA 1205
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1292 TGTTAGAAAGGCTGTTCGTGCGATAGGCCGATGTGCTATCAAACTAGAGAGAGCAGCTGA 1351
Query 1206 ACGGTGCATCAGTGTTTTGCTCGAGTTGATCAAGATCAAAGTAAATTATGTTGTCCAGGA 1265
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1352 ACGGTGCATCAGTGTTTTGCTCGAGTTGATCAAGATTAAAGTGAATTATGTTGTCCAGGA 1411
Query 1266 GGCCATTATTGTCATAAAAGATATCTTCAGAAGATATCCAAACACGTATGAGTCCATAAT 1325
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1412 GGCCATTATTGTCATCAAAGATATCTTCAGAAGATATCCAAACACGTATGAGTCCATAAT 1471
Query 1326 TGCAACACTCTGTGAGAGTTTAGACACTTTGGATGAACCAGAAGCCAAGGCATCTATGAT 1385
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1472 TGCAACACTCTGTGAGAGTTTAGACACTTTGGATGAACCAGAAGCTAAGGCATCTATGAT 1531
Query 1386 ATGGATCATTGGTGAATATGCTGAAAGAATTGACAATGCGGATGAGCTTCTTGAAAGCTT 1445
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1532 ATGGATCATTGGTGAATATGCTGAAAGAATTGACAATGCCGATGAGCTTCTTGAAAGCTT 1591
Query 1446 CCTGGAGAGTTTTCCTGAGGAACCAGCACAGGTCCAGTTGCAGCTTCTAACTGCTACTGT 1505
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1592 TCTGGAGAATTTTCCTGAGGAACCAGCACAGGTCCAGTTGCAGCTCCTAACTGCTACTGT 1651
Query 1506 TAAGCTATTCCTGAAGAAGCCAACTGAAGGCCCTCAACAAATGATTCAGGTTGTCTTGAA 1565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1652 TAAGCTATTCCTGAAGAAGCCAACTGAAGGCCCTCAACAAATGATTCAGGTTGTCTTGAA 1711
Query 1566 TAACGCTACTGTGGAGACGGATAATCCTGATCTCAGAGATCGTGCATACATATACTGGCG 1625
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1712 TAATGCTACTGTGGAGACGGATAATCCTGATCTCAGAGATCGTGCATACATATACTGGCG 1771
Query 1626 TCTTCTATCCACTGATCCGGAGGCCGCTAAAGATGTTGTTTTAGCTGAAAAGCCCGTGAT 1685
|||||||||||||||||| ||||| || || |||||||| ||||||||||||||||||||
Sbjct 1772 TCTTCTATCCACTGATCCTGAGGCTGCCAAGGATGTTGTCTTAGCTGAAAAGCCCGTGAT 1831
Query 1686 TACTGACGACTCAAACCAGCTAGACCCATCACTTCTTGATGAGCTGCTTACAAATATTTC 1745
| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1832 TTCTGACGACTCAAACCAGCTAGACCCATCACTTCTTGATGAGCTTCTTACAAATATTTC 1891
Query 1746 AACCTTGTCCTCTGTGTACCACAAACCCCCAGAAGCTTTTGTTACCCGCTTGAAAACCAC 1805
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1892 GACCTTGTCCTCTGTGTACCACAAACCCCCAGAGGCTTTTGTTACCCGCTTGAAAACGAC 1951
Query 1806 AGTTCAGAAAACAGAAGACGAGGACTTTGCGGAAGGAAGCGAAGCAGGATACTCATCTAG 1865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1952 AGTTCAGAAAACAGAAGACGAGGACTTTGCGGAAGGAAGCGAAGCAGGATACTCATCTAG 2011
Query 1866 TAATCCGGTTGATAGTGCAGCTTCCCCTCCATCCACCACAGGTAATATCCCACAGCCTGC 1925
|||||||||||||||||||||||| ||| |||| |||||||||||||||||| |
Sbjct 2012 TAATCCGGTTGATAGTGCAGCTTC---TCC-TCCA-----GGTAATATCCCACAGCCTTC 2062
Query 1926 CGGAAGACAACCAGCAGCAACGGTCCCAGCTCCTGTACCTGATCTGCTAGGTGACCTGAT 1985
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 2063 CGGAAGACAACCAGCACCAGCGGTCCCAGCTCCTGTACCTGATCTGCTAGGTGACCTGAT 2122
Query 1986 GGGATTGGATAATGCCGCTATTGTCCCGGTTGATGAACCCATAACTCCATCTGGTCCTCC 2045
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 2123 GGGATTGGATAATGCCGCTATTGTCCCGGTTGATGATCCCATAACTCAATCTGGTCCTCC 2182
Query 2046 TTTGCCGGTTGTCGTGCCAGCTTCAAGTGGTCAAGGTCTGCAGATAAGCGCTCAATTATC 2105
| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2183 TCTGCCCGTTGTCGTCCCAGCTTCAAGTGGTCAAGGTCTGCAGATAAGCGCTCAATTATC 2242
Query 2106 CCGAAAAGATGGACAAGTATTCTACAGTATGCTCTTCGAGAATAACTCGCAGACGGTACT 2165
||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||| ||
Sbjct 2243 CCGAAAAGATGGACAAGTATTTTACAGTATGCTCTTCGAGAACAACTCGCAGTCGGTTCT 2302
Query 2166 TGATGGTTTCATGATTCAGTTCAACAAGAACACATTCGGCCTTGCAGCTGCTGGACCTCT 2225
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct 2303 TGATGGTTTCATGATTCAGTTCAACAAAAACACATTCGGCCTTGCAGCTGCTGGATCTCT 2362
Query 2226 TCAGATTCCGCCTTTGCAACCTGGAACGTCTGCCAGGACAATGCTACCTATGGTCTTGTT 2285
|||||||||||||||||| || | ||| || |||||||||||||||||||||||||||||
Sbjct 2363 TCAGATTCCGCCTTTGCATCCCGCAACATCCGCCAGGACAATGCTACCTATGGTCTTGTT 2422
Query 2286 CCAGAACATGTCTGCTGGGCCTCCAAGCTCGCTATTACAAGTCGCTGTCAAAAACAATCA 2345
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 2423 CCAAAACATGTCTGCTGGGCCTCCAAGCTCGCTCTTACAAGTCGCTGTCAAAAACAACCA 2482
Query 2346 GCAGCCTGTTTGGTACTTCACAGATAAGATTATACTTCATGCTCTTTTCGGTGAAGATGG 2405
|||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 2483 GCAGCCCGTGTGGTACTTCACCGATAAGATTATACTTCATGCTCTTTTCGGTGAAGACGG 2542
Query 2406 TAGAATGGAACGTGGAACCTTCCTTGAGACATGGAGGTCGTTACCGGACTCGAATGAAGT 2465
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2543 TAGAATGGAACGTGGAACCTTCCTTGAGACATGGAGGTCGTTACCGGACTCAAATGAAGT 2602
Query 2466 CCAGAAAGAATTCCCCGGGATCACCATCACAAGCGTTGAATCGACTATTGATTTGCTCAC 2525
|| ||||||||||||||||||||||||||| ||||| ||||| ||||| || ||||||||
Sbjct 2603 CCTGAAAGAATTCCCCGGGATCACCATCACGAGCGTCGAATCAACTATCGAATTGCTCAC 2662
Query 2526 AGCATTCAACATGTTCTTCATAGCAAAACGCAAGAACGGGAACCAAGACGTGATCTACTT 2585
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 2663 AGCATTCAACATGTTCTTTATAGCAAAGCGCAAGAACGGGAACCAAGACGTGATCTACTT 2722
Query 2586 ATCAGCAAAAGATCCACGAGATGTTCCGTTTTTGATCGAGCTCACTGCAATGGTGGGCCA 2645
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2723 ATCAGCCAAAGATCCACGAGATGTACCGTTTTTGATCGAGCTCACTGCAATGGTGGGCCA 2782
Query 2646 ACCAGGTCTCAAATGCGCAGTGAAAACTCCCACTCCCGAGATTGCACCTGTCTTCTTCGA 2705
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 2783 ACCAGGTCTCAAATGCGCAGTGAAAACTCCCACTCCCGAGATTGCGCCTCTCTTCTTCGA 2842
Query 2706 AGCTTTGGAGCTTCTCTTCAAGGCTTGATGATTAACATTGTTGTCAAAAGGCTAA-AA-- 2762
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||
Sbjct 2843 AGCTTTGGAGCTTCTCTTCAAGGCTTGATGATTAACGTTGTTATCAAAAGGCTAATAAGA 2902
Query 2763 CCA-GACCTGCAAGGTTTCAGAT-TT-TTTCTT 2792
||| |||||| ||||||||||| || ||||||
Sbjct 2903 CCAAGACCTGAAAGGTTTCAGAGATTCTTTCTT 2935
Score = 159 bits (86), Expect = 1e-37
Identities = 122/137 (89%), Gaps = 11/137 (8%)
Strand=Plus/Plus
Query 1 AAAATCTCAGAGAAGAAAAATCGT--TGTCAGGTC--------G-GAGAAATGAGTGGTC 49
|||||||||||||||||| ||||| |||||||| | |||||||||||||||
Sbjct 70 AAAATCTCAGAGAAGAAACATCGTCGGGTCAGGTCGAAGAAAGGAGAGAAATGAGTGGTC 129
Query 50 ACGATTCGAAATACTTCTCGACAACGAAGAAGGGAGAGATCCCTGAGCTCAAGGAAGAGC 109
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 130 ACGATTCGAAATACTTCTCCACGACGAAGAAGGGAGAGATCCCTGAGCTCAAGGAAGAGC 189
Query 110 TTAATTCCCAGTATAAG 126
|||||||||||||||||
Sbjct 190 TTAATTCCCAGTATAAG 206
Score = 86.1 bits (46), Expect = 2e-15
Identities = 48/49 (98%), Gaps = 0/49 (0%)
Strand=Plus/Plus
Query 2784 TTTTTTCTTCGTCTGAGTTTAGTGTATGTAATAAATCCCATGTTTGTGT 2832
|||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2954 TTTTTTCTTCTTCTGAGTTTAGTGTATGTAATAAATCCCATGTTTGTGT 3002
> AT4G23460.1 | Symbols: | Adaptin family protein | chr4:12243671-12248950
REVERSE LENGTH=2962
Length=2962
Score = 3049 bits (1651), Expect = 0.0
Identities = 2375/2723 (87%), Gaps = 55/2723 (2%)
Strand=Plus/Plus
Query 34 GGAG-AAATGAGTGGTCACGATTCGAAATACTTCTCGACAACGAAGAAGGGAGAGATCCC 92
|||| ||||||| ||||| ||||| ||||| || ||||| ||||||||||||||||||||
Sbjct 46 GGAGAAAATGAGCGGTCATGATTCTAAATATTTTTCGACTACGAAGAAGGGAGAGATCCC 105
Query 93 TGAGCTCAAGGAAGAGCTTAATTCCCAGTATAAGGATAAGAGAAAAGATGCAGTTAAGAA 152
|||||||||||||||||| ||||| ||||| ||||||||||| |||||||| ||||||||
Sbjct 106 TGAGCTCAAGGAAGAGCTGAATTCACAGTACAAGGATAAGAGGAAAGATGCTGTTAAGAA 165
Query 153 GGTTATTGCGGCGATGACTGTGGGGAAGGATGTTTCATCACTTTTCACTGATGTAGTCAA 212
|||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 166 GGTTATTGCGGCAATGACTGTTGGAAAGGATGTTTCATCACTTTTCACTGATGTAGTCAA 225
Query 213 TTGTATGCAAACGGAAAATTTGGAGTTGAAGAAGCTTGTTTACTTGTATCTCATAAATTA 272
||| |||||||| || ||| ||||||||||||||||||||||||||||||| ||||| ||
Sbjct 226 TTGCATGCAAACTGAGAATCTGGAGTTGAAGAAGCTTGTTTACTTGTATCTGATAAACTA 285
Query 273 TGCGAAAAGTCAGCCAGATCTTGCTATTCTTGCAGTAAATACTTTTGTAAAGGATTCACA 332
||| ||||| ||||||||||||||||| || || |||||||||||||| |||||||||||
Sbjct 286 TGCAAAAAGCCAGCCAGATCTTGCTATCCTCGCTGTAAATACTTTTGTTAAGGATTCACA 345
Query 333 GGATCCAAATCCACTGATTCGAGCTTTGGCTGTGCGGACAATGGGCTGCATTCGTGTTGA 392
|| ||||||||| |||| || |||||||||||||| || |||||||| |||||||||||
Sbjct 346 AGACCCAAATCCATTGATCCGGGCTTTGGCTGTGCGAACGATGGGCTGTATTCGTGTTGA 405
Query 393 TAAAATCACAGAATATCTATGTGATCCTCTTCA-AAAGTGCCTAAAGGATGATGATCCAT 451
||| || ||||||||| | |||||||||||||| ||| ||||||||||||||||||||||
Sbjct 406 TAAGATTACAGAATATTTGTGTGATCCTCTTCAGAAA-TGCCTAAAGGATGATGATCCAT 464
Query 452 ATGTCCGGAAGACAGCAGCTATTTGCGTTGCTAAGCTTTTTGACATAAATGCTGAATTGG 511
||||||| ||||||||||||||||| |||||||| || |||||||||||||||||||| |
Sbjct 465 ATGTCCGCAAGACAGCAGCTATTTGTGTTGCTAAACTGTTTGACATAAATGCTGAATTAG 524
Query 512 TGGAGGATAGGGGTTTCCTTGAAGCCTTGAAAG-ATTTGATATCAGACAACAATCCGATG 570
| ||||||||||| ||||| |||||||| |||| |||| ||||||||||| ||||| |||
Sbjct 525 TTGAGGATAGGGGGTTCCTGGAAGCCTT-AAAGGATTTAATATCAGACAATAATCCAATG 583
Query 571 GTTGTTGCCAATGCTGTAGCAGCCCTTGCAGAGATTCAAGAGAATAGTACTAGCCCCATA 630
||||| || ||||||||||| |||||||||||||| ||||||||||||||||| ||||||
Sbjct 584 GTTGTGGCAAATGCTGTAGCTGCCCTTGCAGAGATCCAAGAGAATAGTACTAGTCCCATA 643
Query 631 TTTGAGATCAATAGTACAACCCTTACAAAGCTCCTTACCGCTCTAAATGAATGCACTGAG 690
||||| ||||||||||| | ||| |||||||||||||| ||| | |||||||| |||||
Sbjct 644 TTTGAAATCAATAGTACCATCCTCACAAAGCTCCTTACAGCTTTGAATGAATGTACTGAA 703
Query 691 TGGGGTCAAGTTTTTATATTAGATGCTTTATCGAGGTATAAAGCAGCTGATCCCCGTGAA 750
||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||
Sbjct 704 TGGGGTCAAGTTTTTATATTAGATGCTTTGTCGAGGTATAAGGCATCTGATCCTCGTGAA 763
Query 751 GCTGAAAATATTGTTGAGAGAGTCACACCAAGGTTACAACATGCCAACTGCGCTGTTGTG 810
|||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct 764 GCTGAAAATATTGTTGAGAGAGTCACTCCAAGGTTGCAACATGCCAACTGTGCTGTTGTG 823
Query 811 CTTTCAGCTGTTAAGATGATCCTTCAACAAATGGAACTTATCACTAGTACAGACGTGATT 870
|||||||||||||||||||||||||| || ||||| ||||| ||||| ||||| ||||||
Sbjct 824 CTTTCAGCTGTTAAGATGATCCTTCAGCAGATGGAGCTTATTACTAGCACAGATGTGATT 883
Query 871 CGAAATCTTTGCAAGAAGATGGCTCCACCCCTTGTTACATTGCTTTCTGCCGAACCTGAG 930
|||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct 884 CGAAATCTTTGCAAGAAGATGGCTCCTCCCCTAGTTACATTGCTTTCTGCAGAACCTGAG 943
Query 931 ATACAATATGTTGCACTTCGTAACATTAATCTTATTGTGCAAAA-ACGACCCACTATCCT 989
||||| ||||||||||||||||||||||| |||||||| ||||| | |||||||||| ||
Sbjct 944 ATACAGTATGTTGCACTTCGTAACATTAACCTTATTGTCCAAAAGA-GACCCACTATTCT 1002
Query 990 TGCCCATGAAATTAAGGTTTTCTTCTGCAAGTATAACGACCCGATTTATGTTAAGATGGA 1049
|||||||||||| ||||| ||||||||||||||||| || ||||| ||||||||||||||
Sbjct 1003 TGCCCATGAAATCAAGGTGTTCTTCTGCAAGTATAATGATCCGATATATGTTAAGATGGA 1062
Query 1050 GAAGTTGGAGATTATGATTAAACTTGCCTCTGACAGAAACATAGACCAGGTTCTTCTTGA 1109
|||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1063 GAAGTTAGAGATTATGATAAAACTTGCTTCTGACAGAAACATAGACCAGGTTCTTCTGGA 1122
Query 1110 ATTCAAAGAGTATGCCACGGAAGTAGACGTTGATTTTGTTAGAAAGGCTGTTCGTGCCAT 1169
|||||||| ||||||||||||||||| |||||||||||| | |||||||||||||| ||
Sbjct 1123 GTTCAAAGAATATGCCACGGAAGTAGATGTTGATTTTGTTCGGAAGGCTGTTCGTGCTAT 1182
Query 1170 AGGCCGATGTGCTATCAAACTAGAGAGAGCAGCTGAACGGTGCATCAGTGTTTTGCTCGA 1229
|||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct 1183 AGGCCGATGTGCCATCAAACTAGAAAGAGCAGCTGAACGGTGCATCAGTGTTTTACTTGA 1242
Query 1230 GTTGATCAAGATCAAAGTAAATTATGTTGTCCAGGAGGCCATTATTGTCATAAAAGATAT 1289
| ||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||||||
Sbjct 1243 GCTGATCAAGATCAAAGTAAACTACGTTGTGCAGGAGGCCATTATAGTCATCAAAGATAT 1302
Query 1290 CTTCAGAAGATATCCAAACACGTATGAGTCCATAATTGCAACACTCTGTGAGAGTTTAGA 1349
||| |||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||
Sbjct 1303 CTTTAGAAGATATCCAAATACGTATGAGTCCATAATCGCAACACTCTGTGAGAGTCTAGA 1362
Query 1350 CACTTTGGATGAACCAGAAGCCAAGGCATCTATGATATGGATCATTGGTGAATATGCTGA 1409
||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1363 CACATTGGATGAACCAGAAGCTAAGGCATCTATGATTTGGATCATTGGTGAATATGCTGA 1422
Query 1410 AAGAATTGACAATGCGGATGAGCTTCTTGAAAGCTTCCTGGAGAGTTTTCCTGAGGAACC 1469
|||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct 1423 AAGAATCGACAATGCGGATGAACTTCTTGAAAGCTTCCTGGAGAATTTCCCTGAGGAACC 1482
Query 1470 AGCACAGGTCCAGTTGCAGCTTCTAACTGCTACTGTTAAGCTATTCCTGAAGAAGCCAAC 1529
|||||| ||||| |||||||||| || ||||| || || ||||| ||||||||||||||
Sbjct 1483 AGCACAAGTCCAACTGCAGCTTCTTACAGCTACAGTCAAACTATTTCTGAAGAAGCCAAC 1542
Query 1530 TGAAGGCCCTCAACAAATGATTCAGGTTGTCTTGAATAACGCTACTGTGGAGACGGATAA 1589
||||||||| ||||||||||||||||||||||||||||| |||||||| || || |||||
Sbjct 1543 TGAAGGCCCACAACAAATGATTCAGGTTGTCTTGAATAATGCTACTGTTGAAACAGATAA 1602
Query 1590 TCCTGATCTCAGAGATCGTGCATACATATACTGGCGTCTTCTATCCACTGATCCGGAGGC 1649
|||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct 1603 TCCTGATCTCAGGGATCGTGCATACATCTACTGGCGTCTTCTATCGACTGATCCTGAGGC 1662
Query 1650 CGCTAAAGATGTTGTTTTAGCTGAAAAGCCCGTGATTACTGACGACTCAAACCAGCTAGA 1709
|| || ||||||||||||||||||||||| ||||||||||| ||||||||||| || ||
Sbjct 1663 GGCCAAGGATGTTGTTTTAGCTGAAAAGCCTGTGATTACTGATGACTCAAACCAACTTGA 1722
Query 1710 CCCATCACTTCTTGATGAGCTGCTTACAAATATTTCAACCTTGTCCTCTGTGTACCACAA 1769
|| || || || |||||||| ||| ||||||| || ||||||||||||||||| |||||
Sbjct 1723 TCCGTCGCTCCTGGATGAGCTACTTGCAAATATATCCACCTTGTCCTCTGTGTATCACAA 1782
Query 1770 ACCCCCAGAAGCTTTTGTTACCCGCTTGAAAACCACAGTTCAGAAAACAGAAGACGAGGA 1829
|| ||||| |||||||| ||||||||||||||||||||||||||||| || || |||||
Sbjct 1783 GCCGCCAGAGGCTTTTGTAACCCGCTTGAAAACCACAGTTCAGAAAACGGAGGATGAGGA 1842
Query 1830 CTT-TGCGGAAGGAAGCGAAGCAGGATA-CTC-A----TCTAGTAATCCGGTTGATAGTG 1882
|| || ||||| |||||| ||||||| | | | ||| |||||||||||||| |||
Sbjct 1843 -TTATGTAGAAGGGAGCGAAACAGGATATCCCGAGGCATCTGGTAATCCGGTTGATGGTG 1901
Query 1883 CAGCTTCCCC-TCCATCCACCACAGG-TAATATCCCACAGCCTGCCGGAAGACAACCAGC 1940
|||||||||| || | | |||||||| || | || || ||| | | | | ||
Sbjct 1902 CAGCTTCCCCGTC-AGCTACCACAGGCTA-TGTCACAAAGC-T-----A-G-CT----GC 1947
Query 1941 AGCAACGGTCCCAGCTCCTGTACCTGATCTGCTAGGTGACCTGATGGGATTGGATAATGC 2000
|| | || |||||||||||| ||||||||||||||||| ||||| | ||||||||
Sbjct 1948 TGC--C---CC-AGCTCCTGTACCCGATCTGCTAGGTGACCTAATGGGGTCAGATAATGC 2001
Query 2001 CGCTATTGTCCCGGTTGATGAACCCATAACTCCATCTGGTCCTCCTTTGCCGGTTGTCGT 2060
|| || ||||| || |||||||||| |||||| || |||| ||| |||| |||||| |
Sbjct 2002 TGCAATCGTCCCTGTAGATGAACCCACAACTCCGTCAGGTCGTCCACTGCCTGTTGTCCT 2061
Query 2061 GCCAGCTTCAA-GTGGTCAAGGTCTGCAGATAAGCGCTCAATTATCCCGAAAAGATGGAC 2119
||||| |||| | ||||||||||||||||| |||||||||||| ||||| ||||||| |
Sbjct 2062 ACCAGCATCAAAG-GGTCAAGGTCTGCAGATTAGCGCTCAATTAACCCGACAAGATGGTC 2120
Query 2120 AAGTATTCTACAGTATGCTCTTCGAGAATAACTCGCAGACGGTACTTGATGGTTTCATGA 2179
|||||||||||||||||||| ||||||| ||||||||| | | |||||||| |||||||
Sbjct 2121 AAGTATTCTACAGTATGCTCCTCGAGAACAACTCGCAGTCACTTCTTGATGGCTTCATGA 2180
Query 2180 TTCAGTTCAACAAGAACACATTCGGCCTTGCAGCTG-CTGGACCTCTTCAGATTCCGCCT 2238
||||||||||||| ||| |||||||||||||||||| | ||| | |||||| ||||||||
Sbjct 2181 TTCAGTTCAACAAAAACTCATTCGGCCTTGCAGCTGTC-GGATCACTTCAGGTTCCGCCT 2239
Query 2239 TTGCAACCTGGAACGTCTGCCAGGACAATGCTACCTATGGTCTTGTTCCAGAACATGTCT 2298
||||||| ||| | ||||||||||||||| | || ||||| |||| ||| |||||||||
Sbjct 2240 CTGCAACCCGGAGCATCTGCCAGGACAATGATGCCAATGGTATTGTCCCAAAACATGTCT 2299
Query 2299 GCTGGG-CCTCCAAGCTCGCTATTACAAGTCGCTGTCAAAAACAATCAGCAGCCTGTTTG 2357
|||| || ||| ||||| |||| ||||| || ||||||||||| ||||||||||| ||
Sbjct 2300 ACTGGCTCCACCA-GCTCGGTATTGCAAGTTGCCGTCAAAAACAACCAGCAGCCTGTCTG 2358
Query 2358 GTACTTCACAG-ATAAGATTATACTTCATGCTCTTTTCGGTGAAGATGGTAGAATGGAAC 2416
||||||| || |||||||| ||||| | ||||||||| ||||||||| | ||||| |
Sbjct 2359 GTACTTCG-AGGATAAGATTGTACTTAACGCTCTTTTCTCAGAAGATGGTCGGATGGAGC 2417
Query 2417 GTGGAACCTTCCTTGAGACATGGAGGTCGTTACCGGACTCGAATGAAGTCCAGAAAGAAT 2476
| ||||||||||| |||||||||| ||||||||||| || || || || ||||||||||
Sbjct 2418 GCGGAACCTTCCTCGAGACATGGAAATCGTTACCGGATTCAAACGAGGTGCAGAAAGAAT 2477
Query 2477 TCCCCGGGATCACCATCACAAGCGTTGAATCGACTA-TTGATTTGCTCACAGCATTCAA- 2534
|||||||||| |||||||| ||||| || || || | ||||||| ||| | |||| |||
Sbjct 2478 TCCCCGGGATAACCATCACGAGCGTGGAGTCAAC-ACTTGATTTACTCGCCGCAT-CAAA 2535
Query 2535 CATGTTCTTCATAGCAAAACGCAAGAACGGGAACCAAGACGTGATCTA-CTTATCAGCAA 2593
|||||||||||||||||| || ||||| |||||||||||||| |||| ||| || || |
Sbjct 2536 CATGTTCTTCATAGCAAAGCGTAAGAATGGGAACCAAGACGTCCTCTATCTT-TCGGCCA 2594
Query 2594 AAG-ATCCACGAGATGTTCCGTTTTTGATCGAGCTCACTGCAATGGTGGGCCAACCAGGT 2652
| | | ||| ||| | ||||| ||||||| || || || || ||||| ||||| |||
Sbjct 2595 AGGTA-CCAAGAGGCATACCGTTCCTGATCGAACTAACGGCCATAGTGGGTCAACCTGGT 2653
Query 2653 CTCAAATGCGCAGTGAAAACTCCCACTCCC-GAGATTGCACCTGTCTTCTTCGAAGCTTT 2711
|| ||||| ||||| || ||||| || ||| ||||| || ||| ||||||| ||||| |
Sbjct 2654 CTGAAATGTGCAGTCAAGACTCCAAC-CCCTGAGATCGCTCCTCTCTTCTTTGAAGCAGT 2712
Query 2712 GGAGCTTCTCTTCAAGGCTTGAT 2734
|| ||||||||||||||||||
Sbjct 2713 CGAAATTCTCTTCAAGGCTTGAT 2735
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 158678040709
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5