BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489983
Length=3377
Score E
Sequences producing significant alignments: (Bits) Value
AT4G11610.1 | Symbols: | C2 calcium/lipid-binding plant phosph... 5011 0.0
> AT4G11610.1 | Symbols: | C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein | chr4:7013729-7018049
REVERSE LENGTH=3466
Length=3466
Score = 5011 bits (2713), Expect = 0.0
Identities = 3084/3262 (95%), Gaps = 29/3262 (1%)
Strand=Plus/Plus
Query 1 ACTTGAAATCTAAGTTGGTCTTTCCAAAATTATTTAA-GTTTCTCCACAACCtataaaat 59
|||||||||||||||||||||| ||| ||||||| || ||||||||||| || | | ||
Sbjct 1 ACTTGAAATCTAAGTTGGTCTTACCATAATTATTCAATTTTTCTCCACAA-CT-T-ACAT 57
Query 60 ataccaatgaatgcatatgcatgtgcaaataaatattataatatgtagtatataatTTCA 119
|||| ||||||||| ||||||||||| || ||| || || ||||||||||||| || ||
Sbjct 58 ATACTTATGAATGCACATGCATGTGCATAT-AAT-TT-TATTATGTAGTATATAGTTCCA 114
Query 120 AGACCCTTTTATCAAAATTGAAGTTGTGAGCTTGAATCTACTCTAAGCCTCTC-TTCACT 178
|||||| |||||||||||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 115 AGACCC-TTTATCAAAATTGAAGTTGTGAGCTTGATTCTACTCTAAGTCTCTCTTTCACT 173
Query 179 TTTAAGTGTTCGATTTGATCGAACAAAACAAGATCGACGGTCATGATGATGAGCAATCTA 238
||||||||||| ||| | || |||||||||||||||||||||||||||||||
Sbjct 174 TTTAAGTGTTC-----GAT----C--AA-AAGATCGACGGTCATGATGATGAGCAATCTA 221
Query 239 AAACTCGGCGTGGACGTGATCGGAGCCCACAATCTCTTCCCAAAAGATGGGCAAGGAACA 298
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 222 AAACTCGGCGTGGACGTGATCGGAGCACACAATCTCTTCCCAAAAGATGGGCAAGGAACA 281
Query 299 TCGAATGCTTACGTTGAGCTTTACTTCGATGGTCAAAAGCACCGAACAACGATCAAAGAT 358
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 282 TCGAACGCTTACGTTGAGCTTTACTTCGATGGTCAAAAGCACCGAACAACGATCAAAGAT 341
Query 359 CGAGACTTAAACCCGGTTTGGCATGAGAGTTTCTTCTTCAACATCTCAGATCCATCTCGT 418
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 342 CGAGACTTAAACCCGGTTTGGAACGAGAGTTTCTTCTTCAACATCTCAGATCCATCTCGT 401
Query 419 CTTCACTATCTCAATCTTGAAGCTCAAGCGTATAGTCACAACAGATCTACTAATGGTCGT 478
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 402 CTTCACTATCTCAATCTTGAAGCTCAAGCTTATAGTCACAACAGATCTACTAATGGACGT 461
Query 479 TCCTTCCTTGGCAAGGTATCGCTTTCAGGGACATCTTTTGTTCCTCATTCTGATGCTGTT 538
|||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||
Sbjct 462 TCCTTCCTTGGCAAGGTATCTCTCTCAGGGACCTCTTTTGTTCCTCATTCTGATGCTGTT 521
Query 539 GTTCTTCACTTTCCCTTGGAGAGACGTGGGATCTTCTCTCGTGTGAGAGGTGAGCTCGGC 598
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 522 GTTCTTCACTTTCCCATGGAGAGACGTGGGATCTTTTCTCGTGTGAGAGGTGAGCTCGGC 581
Query 599 TTGAAAGTTTACATAACCGACGAGGCTTCTTTAAAATCCTCTGCTGCTTCTAATGATCAT 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 582 TTGAAAGTTTACATAACCGACGAGGCTTCTTTAAAATCCTCTGCTGCTTCTAATGATCAT 641
Query 659 CTAGATAATCTAGATCC-G-G----CAAGAGCAATGAAGGTAGAACATAGATCCGACAAA 712
| ||||||||||||||| | | ||||||||||||| |||||||||||||||||||||
Sbjct 642 CCAGATAATCTAGATCCGGCGCTCCCAAGAGCAATGAATGTAGAACATAGATCCGACAAA 701
Query 713 CGACATGTGTTTTACAATCTCCCAAACAGTGCTCAAGAACATCAACAACAACATCCACAA 772
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 702 CGACATGTGTTTTACAATCTCCCAAACAGTGCTCAAGAACATCAACACCAACATCCACAA 761
Query 773 GGGCATAACCAGTCCTCTTCCTTAGCCGCTGAACAAGATCATCATAACGAACATCATCAC 832
|||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 762 GGGCCTAACCAATCCTCTTCCTTAGCCGCTGAACAAGATAATCATAACGAACATCATCAC 821
Query 833 CATTACGTGCCAAAGCACCAAGTAAACGAGATGAGACCCGAACCAGCACCTCCTTCGAAG 892
|||||||| |||||||| |||||| ||||||||||| |||||||||| | || ||||||
Sbjct 822 CATTACGTACCAAAGCATCAAGTAGACGAGATGAGATCCGAACCAGCGCGGCCCTCGAAG 881
Query 893 CTAGTCCATGCGCATTCCATTGCTTCGGCTCAGCCTGCAGATTTCGCGCTTAAGGAAACA 952
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 882 CTAGTCCATGCGCATTCCATTGCTTCGGCTCAGCCTGCTGATTTCGCGCTTAAGGAGACA 941
Query 953 AGCCCGCATCTCGGTGGTGGAAGAGTCGTTGGTGGGCGTGTTATCCACAAGGACCAAACC 1012
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||
Sbjct 942 AGCCCGCATCTCGGTGGTGGAAGAGTCGTTGGTGGGCGTGTTATACACAAAGACAAAACC 1001
Query 1013 GCTACAAGTACTTATGATCTTGTAGAGAGAATGTATTTCCTTTATGTTCGTGTCGTCAAA 1072
||||| ||||||||||||||||| ||||||||||||||||||||||| || || ||||||
Sbjct 1002 GCTACGAGTACTTATGATCTTGTCGAGAGAATGTATTTCCTTTATGTCCGCGTTGTCAAA 1061
Query 1073 GCTCGTGAGCTTCCTATAATGGATATAACAGGAAGTGTTGATCCATTCGTGGAGGTTAAA 1132
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |
Sbjct 1062 GCTCGTGAGCTTCCTATAATGGATATAACAGGAAGTGTTGATCCATTCGTCGAGGTGAGA 1121
Query 1133 GTGGGGAACTATAAAGGAATCACAAGACATTTTGAGAAGAGACAACATCCGGAGTGGAAC 1192
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1122 GTGGGGAACTACAAAGGAATCACAAGACATTTTGAGAAGAGACAACATCCGGAATGGAAC 1181
Query 1193 CAAGTGTTTGCATTTGCGAAAGAGCGAATGCAAGCCTCGGTGTTGGAAGTAGTGGTTAAG 1252
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182 CAAGTGTTTGCATTCGCGAAAGAGCGAATGCAAGCCTCGGTGTTGGAAGTAGTGGTTAAG 1241
Query 1253 GACAAAGATCTTTTGAAAGACGATTATGTCGGGTTTGTTAGGTTTGACATTAATGATGTC 1312
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1242 GACAAAGATCTTTTAAAAGACGATTATGTCGGGTTTGTTAGGTTTGACATTAATGATGTC 1301
Query 1313 CCTCTTCGTGTGCCTCCGGACAGCCCTCTTGCTCCGCAATGGTATAGATTAGAAGACAAG 1372
|||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1302 CCTCTTCGTGTGCCACCAGACAGCCCTCTTGCTCCGCAATGGTATAGATTAGAGGACAAG 1361
Query 1373 AAAGGGGAGAAGATCAAAGGTGAGCTAATGCTCGCTGTTTGGATAGGTACACAAGCCGAT 1432
||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||||| |||
Sbjct 1362 AAAGGAGAGAAGATCAAAGGTGAGCTTATGCTTGCTGTTTGGATCGGTACACAAGCTGAT 1421
Query 1433 GAAGCTTTCTCTGATGCTTGGCATTCTGATGCTGCAATGCCTGTTGATTGTTCTCCAGCT 1492
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1422 GAAGCTTTCTCTGATGCTTGGCATTCTGATGCTGCAATGCCCGTTGATTGTTCTCCAGCT 1481
Query 1493 ATCTCCGCCGTTCTTCGCTCAAAGGTCTATCATGCGCCTCGTCTATGGTACGTGCGTGTG 1552
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1482 ATCTCCGCCGTTCTCCGCTCAAAGGTCTATCATGCGCCTCGTCTATGGTACGTCCGTGTG 1541
Query 1553 AATGTGATCGAAGCACAAGACTCAATTCCAACAGACAAAACTAGGTTCCCTGATGTTTAC 1612
|| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1542 AACGTGATCGAAGCACAAGACTTGATTCCGACAGACAAAACTAGGTTCCCTGATGTTTAC 1601
Query 1613 GTCAAAGCGCAGCTAGGAAACCAAGTCATGAAGACCAGACCGTGCCAAGCTCGAACCCTT 1672
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1602 GTCAAGGCGCAGCTAGGAAACCAAGTCATGAAGACCAGACCATGCCAAGCTCGAACCCTT 1661
Query 1673 GGCGCAGTATGGAACGAAGACTTTTTATTTGTTGTTGCAGAGCCATTTGAAGACCATTTG 1732
|| || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1662 GGTGCCGTATGGAACGAAGACTTTTTGTTTGTTGTTGCGGAGCCATTTGAAGACCATTTA 1721
Query 1733 GTTCTCACCGTCGAGGACCGGGTTGCTCCAGGAAAGGACGAGATAGTTGGCCGTACTTAC 1792
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1722 GTTCTCACCGTCGAGGACCGGGTTGCTCCAGGAAAGGACGAGATAGTTGGTCGTACTTAC 1781
Query 1793 ATTCCTTTGAACACGGTAGAGAAGCGAGCTGATGACCATATGATACATGCGCGATGGTAT 1852
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1782 ATTCCTTTGAACACGGTAGAGAAGCGAGCTGATGATCATATGATACATGCGCGATGGTAT 1841
Query 1853 AATCTGGAGAGACCGGTTATTGTAGATGTGGATCAGCTCAAGAGAGAAAAATTCTCTATG 1912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1842 AATCTGGAGAGACCGGTTATTGTAGATGTGGATCAGCTCAAGAGAGAAAAATTCTCTATG 1901
Query 1913 AGGATTCATCTCCGAGTTTGTCTTGAAGGAGGCTACCATGTTTTGGATGAGTCGACACAC 1972
||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||
Sbjct 1902 AGGATTCATCTGCGAGTTTGTCTTGAAGGAGGATACCATGTTTTGGATGAGTCAACTCAT 1961
Query 1973 TATAGCAGCGATCTCCGCCCATCCGCGAGACCGCTCTGGAGACAACCGATTGGAGTTCTT 2032
|| ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct 1962 TACAGCAGCGATCTCCGCCCATCCGCTAGACCACTCTGGAGACAACCGATCGGAGTTCTT 2021
Query 2033 GAACTCGGGATCTTAAACGCTGTTGGACTACACCCAATGAAAACTAGAGAAGGCAGAGGA 2092
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2022 GAGCTCGGGATCTTAAACGCTGTTGGACTTCACCCAATGAAAACTAGAGAAGGCAGAGGA 2081
Query 2093 ACCTCTGACACTTTTTGTGTTGGAAAATATGGCCAAAAGTGGGTTAGAACGAGGACAATG 2152
||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||
Sbjct 2082 ACCTCTGACACTTTTTGCGTTGGGAAATATGGACAAAAGTGGGTTAGAACAAGGACAATG 2141
Query 2153 GTGGATAACTTGTGTCCCAAGTATAACGAGCAGTATACGTGGGAAGTATTCGATCCAGCG 2212
|||||||||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct 2142 GTGGATAACTTGTGTCCCAAGTATAACGAGCAGTATACATGGGAAGTCTTTGACCCAGCG 2201
Query 2213 ACAGTTTTAACCGTTGGTGTGTTTGATAATGGACAGCTTGGAGAAAAAGGAAATAGAGAT 2272
|| |||||||||||||||||||||||||| |||||||| || ||||||||||||||||||
Sbjct 2202 ACGGTTTTAACCGTTGGTGTGTTTGATAACGGACAGCTAGGTGAAAAAGGAAATAGAGAT 2261
Query 2273 GTGAAGATTGGGAAGATTCGCATAAGGTTGTCTACTTTAGAGACTGGACGGATCTACACA 2332
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 2262 GTGAAGATTGGGAAGATTCGTATAAGGTTATCTACTTTAGAGACTGGACGGATCTACACA 2321
Query 2333 CATTCTTATCCGCTCCTCGTTCTTCACCCTACCGGGGTGAAGAAAATGGGCGAGCTGCAT 2392
|||||||| ||||| || |||||||||||||| ||||||||||||||||||||||| |||
Sbjct 2322 CATTCTTACCCGCTACTTGTTCTTCACCCTACTGGGGTGAAGAAAATGGGCGAGCTACAT 2381
Query 2393 ATGGCCGTGAGGTTCACATGCATCTCGTTCGCAAACATGCTTTACCAATACTCAAAACCA 2452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2382 ATGGCCGTGAGGTTCACATGCATCTCGTTCGCAAACATGCTTTACCAATACTCAAAACCA 2441
Query 2453 CTTTTGCCTAAAATGCATTACGTAAGACCGTTTTCAGTTATGCAGCAGGACATGCTTCGG 2512
|||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||
Sbjct 2442 CTTTTGCCTAAAATGCATTATGTTAGACCGTTTTCAGTAATGCAGCAGGACATGCTTCGA 2501
Query 2513 CACCAAGCTGTGAATATAGTGGCTGCACGGCTAGGTAGAGCAGAGCCTCCCCT-ACGGAA 2571
|| ||||| ||||||||||||||||| ||| |||||||||||||||||||||| | ||||
Sbjct 2502 CATCAAGCGGTGAATATAGTGGCTGCGCGGTTAGGTAGAGCAGAGCCTCCCCTGA-GGAA 2560
Query 2572 AGAGATCATTGAGTTTATGTCGGACACGGATTCGCATTTGTGGAGTATGCGTAAGAGCAA 2631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2561 AGAGATCATTGAGTTTATGTCGGACACGGATTCGCATTTGTGGAGTATGCGTAAGAGCAA 2620
Query 2632 AGCTAATTTCTTCCGGATGATGACGGTTTTCTCTGGAGTTATCGCGGTTGGGAAATGGTT 2691
|||||||||||||||||||||||| |||||||| || |||||||||||||| ||||||||
Sbjct 2621 AGCTAATTTCTTCCGGATGATGACAGTTTTCTCCGGTGTTATCGCGGTTGGAAAATGGTT 2680
Query 2692 CTCGGACATTTGCTCGTGGAGAAACCCGATCACGACCGTTCTTGTTCATGTTCTGTTTCT 2751
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 2681 CTCGGACATTTGCTCGTGGCGAAACCCGATCACGACCGTTCTTGTTCATGTTCTGTTTTT 2740
Query 2752 GATGCTTGTTTGTCTCCCGGAACTGATCTTACCAACCATGTTTCTCTACATGTTTTTGAT 2811
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 2741 GATGCTTGTTTGTCTCCCAGAACTGATCTTACCAACAATGTTTCTCTACATGTTTTTGAT 2800
Query 2812 CGGGCTCTGGAACTACCGATTTAGACCACGTTATCCGCCACACATGAACACAAAAATCTC 2871
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 2801 CGGGCTCTGGAACTACCGGTTTAGACCACGTTATCCACCACACATGAACACAAAAATCTC 2860
Query 2872 TCAAGCAGAGGCGGTCCATCCAGACGAGCTTGACGAAGAGTTTGACACGTTTCCAACCAC 2931
|||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 2861 TCAAGCCGAGGCGGTCCATCCAGACGAGCTTGATGAAGAGTTTGATACGTTTCCAACCAC 2920
Query 2932 AAGAAACCCTGACATGGTGCGGTTAAGGTACGACCGGCTAAGAAGCGTGGCCGGGAGGAT 2991
|||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct 2921 TAGAAACCCTGACATGGTGCGTTTAAGGTATGACCGGCTTAGAAGCGTGGCCGGGAGGAT 2980
Query 2992 TCAGACCGTGATTGGAGATCTTGCAACACAAGGAGAACGTTTTCAAGCACTTTTAAGCTG 3051
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2981 TCAGACCGTGATCGGAGATCTTGCAACACAAGGAGAACGTTTTCAAGCACTTTTAAGCTG 3040
Query 3052 GAGAGATCCACGCGCGACCGCGATATTTGTTATATTCTGCTTTCTTGCAGCCATTGTTTT 3111
||||||||||||||| |||||||||||||||||||| |||||| |||| ||||| |||||
Sbjct 3041 GAGAGATCCACGCGCTACCGCGATATTTGTTATATTGTGCTTTATTGCGGCCATAGTTTT 3100
Query 3112 CTTCATAACACCAATTCAGATTGTTGTAGCGTTGGCTGGTTTCTTCACGATGAGGCATCC 3171
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 3101 CTTCATAACACCGATTCAGATTGTTGTAGCATTGGCTGGATTCTTCACGATGAGGCATCC 3160
Query 3172 GAGGTTCCGACACCGGCTTCCTTCTGTTCCGGTTAACTTCTTCCGCCGGTTACCTGCTCG 3231
|||||||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct 3161 GAGGTTCCGACATCGGCTTCCTTCTGTTCCAGTTAACTTCTTTCGCCGGTTGCCTGCTCG 3220
Query 3232 AACGGATAGTATGCTTTAGCTT 3253
||||||||||||||| ||||||
Sbjct 3221 AACGGATAGTATGCTCTAGCTT 3242
Score = 143 bits (77), Expect = 1e-32
Identities = 97/106 (92%), Gaps = 3/106 (3%)
Strand=Plus/Plus
Query 3273 ATGGTATTCATTAGTGTTTCCTTTTCAAGATATAGCTCTA-GAAAAATCAGAGAAAGGAT 3331
|||||||||||||||||||||||||||| | ||| ||||| ||||| |||||||||||||
Sbjct 3358 ATGGTATTCATTAGTGTTTCCTTTTCAAAA-ATACCTCTAAGAAAA-TCAGAGAAAGGAT 3415
Query 3332 CAGTGAGTCCAAGATTCCTAATTTGGTATAAACTAGACACGAAATT 3377
|||||||||||| ||||| |||||||||||||||||| | ||||||
Sbjct 3416 CAGTGAGTCCAAAATTCCCAATTTGGTATAAACTAGAAATGAAATT 3461
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 168059259050
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5