BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489986 Length=730 Score E Sequences producing significant alignments: (Bits) Value AT4G11655.1 | Symbols: | Uncharacterised protein family (UPF04... 965 0.0 > AT4G11655.1 | Symbols: | Uncharacterised protein family (UPF0497) | chr4:7038585-7039923 FORWARD LENGTH=796 Length=796 Score = 965 bits (522), Expect = 0.0 Identities = 625/674 (93%), Gaps = 9/674 (1%) Strand=Plus/Plus Query 1 TTTGATGAAAGAGCTTAAAGATCACGTTGTAGTGATGGCCTATGGA-C--CATCGGAGGG 57 |||||||||||||||||||||||||||||||||||| | |||||| | ||||||||| Sbjct 2 TTTGATGAAAGAGCTTAAAGATCACGTTGTAGTGATCACTTATGGACCATCATCGGAGGC 61 Query 58 TTCAGTAACGGCGTCGCCTGTCTCTCAACAGACGCCGTCTTTGTTTGCATACTCTATAAC 117 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 62 TTCAGTAACGGCGTCACCTGTCTCTCAACAGACGCCGTCTTTGTTTGCATACTCCGTAAC 121 Query 118 GCCTTCAACATCAAGATTCAGCTCACGGCGAGCATCGGTTCATGTCATCGGTTTGGTTCT 177 ||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 122 GCCGTCAGCATCAAGATTCAGCTCACGGCGAGCATCGGTTCATGTTATCGGTTTGGTTCT 181 Query 178 CCGGTTTTTAACTTTGGTTCTATGTTTTGTCTCTGCTCTTTCGTTAGCAGTGAATGTTCA 237 ||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 182 CCGGTTTATAACTATGGTTCTATGTTTCGTCTCTGCTCTTTCGTTGGCAGTGAATGTTCA 241 Query 238 TA-GGCCTTCGAGGAGATATCTGACACAGAACTCCTCGAGTTTTGCTTCATATCCTGAAC 296 | ||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct 242 -ACGGCCTTCGAAGAGACATCTGACACAAAACTCCTCGAGTTTTGCTTCATATCCTGAAC 300 Query 297 TATTGTATTGTTTTGTTGTAGCAGTGATAGGATTCGTGTATACATGTTTGCAAACATTCA 356 | ||||||||||||| || |||||||||||||||||||||||| ||||||||||||||| Sbjct 301 TGTTGTATTGTTTTGGAGTTGCAGTGATAGGATTCGTGTATACAAGTTTGCAAACATTCA 360 Query 357 AAGGAGTTTGTGATATTACTCACAGAGGAATTTTAATCTCTGAGCCTCTTTCGGATTATA 416 ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | Sbjct 361 AAGGAGTTTGTGATATTACTCACAGAGGAGTTTTAATCTCTGAGCCTCTCTCGGATTACA 420 Query 417 TCAGCTTCATATTTGACCAGGCTATATGTTACCTACTAGTATCATCTTCTTCGGTGGCAA 476 ||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| Sbjct 421 TCAGCTTCATATTTGACCAGGTTATATGTTACCTACTAGTGTCATCTTCTTCCGTGGCAA 480 Query 477 TTGCGTGGATCCAACATATAAACGAGGATGCGATAAACACACTAAGAAATAATTCCATAA 536 |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| Sbjct 481 TTGCATGGATCCAACATATAAACGAGGATGCGATAAAAACACTAAGAAACAATTCTATAG 540 Query 537 TTTCAGTTTCAATGTCATTCTCTGC-TTTCTTTGTTTTGACACTCTCTAGCCTCTTGTCA 595 ||||||||||||||||||||||||| ||| || ||||||||||||||| ||||||||||| Sbjct 541 TTTCAGTTTCAATGTCATTCTCTGCATTT-TTGGTTTTGACACTCTCTGGCCTCTTGTCA 599 Query 596 GGTTATAAGCTTTGCAAGAGATTTATGTGGTAATTAAATCTTGTAAAGGGTTTTTATATT 655 || ||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 600 GGGTATAAGCTTTGCAAGAGATTTATGTGGTAATTAAATCTTGTAATT--TTTTTATACT 657 Query 656 CATGTCATGTTTAA 669 || ||||||||||| Sbjct 658 CAAGTCATGTTTAA 671 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35415073635 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5