BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg490041 Length=902 Score E Sequences producing significant alignments: (Bits) Value AT4G12370.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1201 0.0 > AT4G12370.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G00893.1); Has 118 Blast hits to 113 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:7331972-7332874 FORWARD LENGTH=903 Length=903 Score = 1201 bits (650), Expect = 0.0 Identities = 823/907 (91%), Gaps = 10/907 (1%) Strand=Plus/Plus Query 1 ATGTACTTACCTAAACGTGGCAACTTGTTCGAACTCTACGATCCATTGCAGCAGAAGTTG 60 ||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||| || Sbjct 1 ATGTACTTACCAAAACGTGGCAATTTGTTCGAACTCTATGATCCATTGCATCAGAAGATG 60 Query 61 TACACATTGAATCTACCCGAGCTTGCCAAATCTACGGTTTGTTACTCAAGAGACGGATGG 120 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 61 TACACATTGAATCTACCTGAGCTTGCCAAATCTACGGTTTGTTACTCAAGAGATGGATGG 120 Query 121 TTACTAATGCGCAAAACCATTTCAAGCGAAATGTTCTTCTTCAACCCGTTTACTCGTAAG 180 ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| || Sbjct 121 TTACTAATGCGTAAAACCATTTCAAGAGAAATGTTCTTCTTCAACCCGTTTACTCGTGAG 180 Query 181 CTCATTAACTTACCAAAGTGTGCGTTATCTTATGATGCCATCGCTTTCTCTTGTGCACCT 240 ||||| ||| ||||||| ||| | ||||| |||||||| ||||||||||||||||||||| Sbjct 181 CTCATAAACGTACCAAAATGTACTTTATCATATGATGCGATCGCTTTCTCTTGTGCACCT 240 Query 241 ACATCAGGTACTTGCGTGTTGCTAGCGTTTAAGCATGTTGCCTATGGTATCACCGCTACG 300 |||||||||||||||||||||||||| |||||||||||| | ||| |||||||| ||||| Sbjct 241 ACATCAGGTACTTGCGTGTTGCTAGCATTTAAGCATGTTTCGTATCGTATCACCACTACG 300 Query 301 AGCACTTGCCATCCCGAAGCAACCGAGTGGGTTACTGAGGATTTACATTTCCATCTTCAT 360 ||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| || Sbjct 301 AGCACTTGCCATCCCAAAGCAACCGAGTGGGTTACTGAGGATCTACAATTCCATCGTCGC 360 Query 361 TTTGGCAGCGATACACTAAAACACAGCAATGTTGTCTATGCGAAACGTCACTTCTATTGC 420 || |||| || ||||| || |||||||||||||||||||| ||||||| |||||||||| Sbjct 361 TTCCGCAGTGAAACACTTAACCACAGCAATGTTGTCTATGCCAAACGTCGCTTCTATTGC 420 Query 421 CTTGACGGTCAAGGACGCTTATATTACTTTGATCCCTCTTCTCGA-GAATGGCATTTTAT 479 ||||||||||||||| ||||||||||||||||||| ||||||||| || ||| |||||| Sbjct 421 CTTGACGGTCAAGGAAGCTTATATTACTTTGATCCGTCTTCTCGAAGA-TGGGATTTTAG 479 Query 480 TTATGAG-TATA-ATCAGCCATGTCCTTATATCTCGGGTAGACTTAGTTACC-GATATGA 536 ||| | ||| | | |||||||||||||||||||| |||| ||||||||| | ||||| Sbjct 480 TTAC-ACCTATTTA-CTGCCATGTCCTTATATCTCGGATAGATTTAGTTACCAG-TATGA 536 Query 537 GCGGAAGAAGAAGAGAATTTTATTGGCTGTGCGGAAAGGAGTGTTCTTTAAGATATATAC 596 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct 537 GCGGAAGAAGAAGAGAATTTTCTTGGCTGTGCGGAAAGGAGTGTTCTTTAAGATATTTAC 596 Query 597 ATGCGGTGGTGAGAAGCCGATTGTGTATAAATTAGAAGACGA-CAAATGGGAGGAGATCA 655 ||| | ||||||||||||||| ||| |||| |||||||| | ||| ||||||||||||| Sbjct 597 ATGTGATGGTGAGAAGCCGATAGTGCATAAGTTAGAAGAT-ATCAATTGGGAGGAGATCA 655 Query 656 ATAGTACTATGCTTGATGGCTTGACAATCTTTACGGGGCTTCATTCCTCTGAGATGAGAG 715 ||||||||| | ||||||| ||||||||||||||||| ||| ||||||||||| ||||| Sbjct 656 ATAGTACTACGATTGATGGATTGACAATCTTTACGGGTCTTTATTCCTCTGAGGTGAGAC 715 Query 716 TTAATCTCCCATGGATGAGGAATAGTGTTTACTTCCCGAGGCTTCGTTTTAAAGTCAAGC 775 ||||||| |||||||||||||||||||||||||| || || ||||||||||| ||||||| Sbjct 716 TTAATCTACCATGGATGAGGAATAGTGTTTACTTTCCTAGACTTCGTTTTAATGTCAAGC 775 Query 776 GTTGTGTATCATATTCATTTGATGAAGAGAGGTATTATCCGCGTAAGCAGTGGCAAGAAC 835 |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct 776 GTTGTGTATCATATTCGCTTGATGAAGAGAGGTATTATCCGCGGAAGCAGTGGCAAGAAC 835 Query 836 AGGAGGATTTATGTCCTCTTGAGAATCTTTGGATTAGGCCACCGAAGAAAGCTTTAGACT 895 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | Sbjct 836 AGGAGGATTTATGTCCTATTGAGAATCTTTGGATTAGGCCACCGAAGAAAGCTGTAGATT 895 Query 896 ACATGTG 902 |||||| Sbjct 896 TCATGTG 902 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44055346919 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5