BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490065
Length=2458
Score E
Sequences producing significant alignments: (Bits) Value
AT4G12620.1 | Symbols: ORC1B, ATORC1B, UNE13 | origin of replic... 3688 0.0
AT4G14700.1 | Symbols: ATORC1A, ORC1A | origin recognition comp... 3107 0.0
> AT4G12620.1 | Symbols: ORC1B, ATORC1B, UNE13 | origin of replication
complex 1B | chr4:7459646-7462253 REVERSE LENGTH=2608
Length=2608
Score = 3688 bits (1997), Expect = 0.0
Identities = 2317/2469 (94%), Gaps = 31/2469 (1%)
Strand=Plus/Plus
Query 1 ATGGCTTCGACTCCAAGAGCAAAAACCTTCAAATCCCCAACCAAAACACCGACTAACATC 60
|||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 1 ATGGCTTCAACTCCAAGAGCAAAAACCTTCAAATCCCCAACCAAAACTCCGTCTAACATC 60
Query 61 TATCGCAAATCGTATCTATCACCATCTTCAACCTCACTCACTCCTCAAACCCCAGAAACT 120
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 61 TATCGCAAATCGTATCTATCTCCATCTTCAACCTCACACACTCCTCAAACCCCAGAAACT 120
Query 121 CTA-ACTCCTCTTCGTAGATCCGCTCGTCATGTTTCTCGAAAAATCGATCTGGGAAATGA 179
| | |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 121 C-ACACTCCTCTCCGTAGATCTGCTCGTCATGTTTCTCGTAAAATCGATCTGGGAAATGA 179
Query 180 CCCAATCGATGTTCCAGGAAGA-GAATCAATCGAAGAAATGAATCTAATTCGAAAACGAG 238
|||||| |||| |||||||| | || ||||||||| |||||||||||||||||||||||
Sbjct 180 CCCAATTGATGCTCCAGGAA-ATGACCCAATCGAAGGAATGAATCTAATTCGAAAACGAG 238
Query 239 AACGAGCGCCGAGAAAACCAACCACTGATGTTGTTCCAGAGAAGTCGACGAAATCAGAAA 298
|||| || || |||||||||||||||||||| |||||| |||||||| |||| ||||||
Sbjct 239 AACGTGCCCCCAGAAAACCAACCACTGATGTCGTTCCATCGAAGTCGAAGAAAACAGAAA 298
Query 299 CTCCgaagaagaagaagaagaTCGATTCGGAAGTTTCCTTCTCTCCTGTTTCTCCAATTC 358
|||||||||||||||||||||| | | | ||||||| |||||||||| ||||||
Sbjct 299 CTCCGAAGAAGAAGAAGAAGAT--A----G-A--TTCCTTCACTCCTGTTTCACCAATTA 349
Query 359 GATCTGAGACGATTAAGAAGAC---GATTAAGAAGAGAGTTTATTACAATAAAGTCGAAT 415
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 350 GATCTGAGACGATTAAGAAGACGAAGAAGAAGAAGAGAGTTTATTACAATAAAGTCGAAT 409
Query 416 TCGATGAAACCGAATTCGAAATCGGTGATGATGTTTATC-TTaagagaagagaagacgcg 474
|||| |||||||||||||||||||||||||||||||| | |||||||||||||||| ||
Sbjct 410 TCGACGAAACCGAATTCGAAATCGGTGATGATGTTTA-CGTTAAGAGAAGAGAAGATTCG 468
Query 475 aattcagatgaagaagaagatccagaaattgaagattgtcagattTGTTTCAAATCGGAT 534
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 469 AATTCAGATGAAGAAGAAGATCCAGAAATTGAAGATTGTCAGATTTGTTTCAAATCAGAT 528
Query 535 ACTAACATAATGATTGAGTGTGATGATTGTTTAGGTGGATTTCATTTGAAATGCTTGAAA 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 529 ACTAACATAATGATTGAGTGTGATGATTGTTTAGGTGGATTTCATTTGAAATGCTTGAAA 588
Query 595 CCGCCGTTGAAGGAAGTTCCAGAAGGTGATTGGATCTGTCAATTTTGTGAGGTTAAAAAG 654
||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 589 CCGCCATTGAAGGAAGTTCCTGAAGGTGATTGGATCTGTCAATTCTGTGAGGTTAAAAAG 648
Query 655 TCAGGTCAAA--C-AACACTTGTGGTTCCTAAGCCACCGGAAGGGAAGAAATTAGCGAGA 711
|| ||||||| | |||||||| ||||||||||||||||||||||||| |||||||||
Sbjct 649 TCTGGTCAAAGTCAAACACTTGACCTTCCTAAGCCACCGGAAGGGAAGAAGTTAGCGAGA 708
Query 712 ACGATGAGGGAGAAGCTTCTTTCCGGTGATTTATGGGCGGCTCGAATCGAGAAGTTGTGG 771
|| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||||| |||
Sbjct 709 ACTATGAGGGAGAAGCTACTTTCCGGTGATCTATGGGCTGCTCGAATCGACAAGTTATGG 768
Query 772 AAAGAAGTTGATGATGGTGGTTGTGTGTATTGGATTAGAGCTCGTTGGTATATGATACCT 831
|||||||||||||| | | |||||||||||||| | |||||||||||||||||||||
Sbjct 769 AAAGAAGTTGATGA---T-G--GTGTGTATTGGATTCGTGCTCGTTGGTATATGATACCT 822
Query 832 GAAGAGACGGTTTCAGGGCGTCAACCGCATAATTTGAAGCGCGAGCTTTATTTGACGAAT 891
|||||||| ||||| |||||||||||||||||| |||| || ||||||||||||||||||
Sbjct 823 GAAGAGACCGTTTCGGGGCGTCAACCGCATAATCTGAAACGAGAGCTTTATTTGACGAAT 882
Query 892 GATTTTGCTGATGTAGAGATGGAATGTATTCTTAGGCATTGTTTTGTCAAGTGTCCTAAG 951
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 883 GATTTTGCTGATATAGAGATGGAATGTATTCTTAGGCATTGTTCTGTCAAGTGTCCTAAG 942
Query 952 GAGTTTTCGAAAGCGAGTAATGATGGTGATGATGTGTTTTTGTGTGAGTATGAGTATGAT 1011
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 943 GAGTTTTCGAAAGCTAGTAATGATGGTGATGATGTGTTCTTGTGTGAGTATGAGTATGAT 1002
Query 1012 GTGCATTGGCGTAGTTTTAAGCGTTTGGCCGAATTGGCTGATGGAGATTCTGATAGTGAT 1071
|| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1003 GTTCATTGGCGTAGCTTTAAGCGTTTGGCTGAATTGGCTGATGGAGATTCTGATAGTGAT 1062
Query 1072 CAAGAGTGGAATGGTAGGAAAGAGGAGGAGATTGATGATAGTGATGAAGAGATGGAGTTT 1131
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||
Sbjct 1063 CAAGAGTGGAATGGTAGGAAGGAGGAGGAGGTTGATGATAGTGATGAAGAGATGGAGCTT 1122
Query 1132 GATGACGAAGTTTCGAAGAGTAAGCGAGGATGTTTAACGAGTGCAAGAGGAGGTGCGAAT 1191
||||| ||||||| |||||||||||||||| |||| || ||||||||||||||||||||
Sbjct 1123 GATGATGAAGTTTTGAAGAGTAAGCGAGGAGGTTTGACTAGTGCAAGAGGAGGTGCGAAC 1182
Query 1192 TCTCGTAAAGGGCGTTTCTTTGGTCTTGAGAAGGT-GGGAGCAAAGCAGATTCCTGAACA 1250
|||||||||||| | |||||||| |||||||||| |||| |||| ||||||||||||
Sbjct 1183 TCTCGTAAAGGGAGATTCTTTGGGGTTGAGAAGGTGGGGA-TGAAGCTGATTCCTGAACA 1241
Query 1251 TGTGAGATGTCATAAGCAAACTGAGTTAGAAAAGGCGAAAGCTACTTTGTTGTTGGCTAC 1310
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 1242 TGTGAGATGTCATAAGCAGAGTGAGTTAGAAAAGGCGAAAGCTACTTTGTTGTTGGCTAC 1301
Query 1311 ACGTCCTAAGTCTCTTCCTTGTAGAAGCAAAGAAATGGAAGAGATCACTGCATTTATAAA 1370
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 1302 ACGTCCTAAGTCTCTTCCTTGTAGAAGCAAAGAAATGGAAGAGATCACTTCGTTTATAAA 1361
Query 1371 AGGTTCAATCTCGGATGATCAGTGTTTAGGAAGATGTATGTATATTCATGGTGTTCCCGG 1430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1362 AGGTTCAATCTCGGATGATCAGTGTTTAGGAAGATGTATGTATATTCATGGTGTTCCCGG 1421
Query 1431 GACTGGGAAGACGATTAGTGTATTATCGGTTATGAAGAATCTAAAGGCTGAGGTTGAAGA 1490
|||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1422 GACTGGGAAGACTATTAGTGTGTTATCGGTTATGAAGAATCTGAAGGCTGAGGTTGAAGA 1481
Query 1491 GGGAAGCGTTAGCCCATATTGCTTTGTGGAGATCAATGGTCTCAAATTGGCTTCACCTGA 1550
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1482 GGGAAGCGTAAGCCCTTATTGCTTTGTGGAGATCAATGGTCTCAAATTGGCTTCACCTGA 1541
Query 1551 GAACATTTACAGCGTTATCTATGAAGCGTTGAGTGGTCATCGAGTCAGTTGGAAGAAAGC 1610
|||||||||||| || ||||||||||| |||||||||||||||||| |||||||||||||
Sbjct 1542 GAACATTTACAGTGTAATCTATGAAGCATTGAGTGGTCATCGAGTCGGTTGGAAGAAAGC 1601
Query 1611 TCTACAGTCTTTAAATGAGAGGTTTGCAGAAGGAAAAAGGATTGGTAAAGAAGATGAGAA 1670
|||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1602 TCTACAGTGTCTAAATGAGAGGTTTGCAGAAGGAAAAAGGATTGGTAAAGAGGATGAGAA 1661
Query 1671 GCCTTGCATACTTCTCATCGACGAACTTGATCTTCTAGTAACTAGAAACCAGTCGGTTTT 1730
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1662 GCCTTGCATACTTCTCATCGACGAACTTGATCTTCTAGTAACTAGAAACCAGTCTGTTTT 1721
Query 1731 ATACAATATTCTGGATTGGCCTACCAAGCCTAACTCCAAATTGGTTGTGTTGGGAATAGC 1790
|||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1722 ATACAACATTCTTGATTGGCCTACCAAGCCTAACTCCAAATTAGTTGTGTTGGGAATAGC 1781
Query 1791 AAACACGATGGATCTTCCAGAGAAGCTGCTTCCTCGAATTTCAAGCCGAATGGGTATACA 1850
|||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1782 AAACACTATGGATCTTCCAGAGAAGCTGCTTCCTCGGATTTCTAGCCGAATGGGTATACA 1841
Query 1851 GAGACTATGTTTCGGTCCTTATAACCACACTCAGCTACAAGAAATCATTTCTACAAGGTT 1910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1842 GAGACTATGTTTCGGTCCTTATAACCACACTCAGCTACAAGAAATCATTTCTACAAGGTT 1901
Query 1911 GAAAGGAATCA-ATGCTTTTGAGAAGACAGCTATTGAATTTGCTTCGAGAAAAGTAGCTG 1969
||| ||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1902 GAATGGAAT-AGATGCTTTCGAGAAGACAGCTATTGAATTTGCTTCGAGAAAAGTAGCTG 1960
Query 1970 CTATTTCAGGAGATGCAAGACGTGCGCTTGAGATATGCAGGCGAGCTGCAGAAGTAGCGG 2029
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1961 CGATTTCAGGAGATGCAAGACGTGCGCTTGAGATATGCAGGCGTGCTGCAGAAGTAGCGG 2020
Query 2030 ATCACCGTCTAAAGAGTAACAAAACTGCAAAGAATCAGCTGGTAATTATGGCAGATGTTG 2089
||||||||||||| | ||||||| | ||||||||||||||||| ||||||||||||||||
Sbjct 2021 ATCACCGTCTAAATACTAACAAATCCGCAAAGAATCAGCTGGTGATTATGGCAGATGTTG 2080
Query 2090 AAACAGCTATTCAAGAGATGTTTCAGGCACCTCATATTCAAGTTATGAAGAGCGTATCGA 2149
|| ||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |
Sbjct 2081 AAGCAGCTATCCAAGAGATGTTTCAGGCACCTCATATTCAAGTGATGAAGAGCGTGTCAA 2140
Query 2150 AACTGAGTAAGATCTTCTTGACGGCTATGGTTCACGAGCTTTACAAAACAGGAATGGCAG 2209
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2141 AACTGAGTAAAATCTTCTTGACGGCTATGGTTCATGAGCTTTACAAAACAGGAATGGCAG 2200
Query 2210 AGACAACCTTTGACCGAGTGGCAACAACAGTATCATCTATTTGCTTAACCAATGGAGAAG 2269
||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct 2201 AGACAACATTTGACCGAGTGGCAACGACAGTATCGTCTATCTGCTTAACCAATGGAGAAG 2260
Query 2270 CTTTTCCAGGTTGGGACATTCTTCTCAAAATCGGTTGCGATCTTGGTGAATGTAGAATCA 2329
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 2261 CTTTTCCAGGTTGGGACATTCTTCTTAAAATCGGTTGCGATCTTGGTGAATGTAGGATCA 2320
Query 2330 TTCTCTGTGAACCTGGAGAGAAGCATAGATTGCAGAAGCTGCAGCTGAATTTTCCAAGTG 2389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2321 TTCTCTGTGAACCTGGAGAGAAGCATAGATTGCAGAAGCTGCAGCTGAATTTTCCAAGTG 2380
Query 2390 ATGATGTTGCTTTTGCATTGAAAGATAACAAGGATCTTCCATGGCTGGCCAATTACTTGT 2449
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 2381 ATGATGTTGCTTTTGCATTGAAAGACAATAAGGATCTTCCATGGCTGGCCAATTACTTGT 2440
Query 2450 GAGTTTTTT 2458
|||||||||
Sbjct 2441 GAGTTTTTT 2449
> AT4G14700.1 | Symbols: ATORC1A, ORC1A | origin recognition complex
1 | chr4:8422231-8424760 FORWARD LENGTH=2530
Length=2530
Score = 3107 bits (1682), Expect = 0.0
Identities = 2225/2475 (90%), Gaps = 85/2475 (3%)
Strand=Plus/Plus
Query 12 TCCAAGAGCAAAAACCTTCAAATCCCCAACCAAAACACCGACTAACATCTATCGCAAATC 71
|||||| ||||||||||||||||||||||||||||| || ||||| || |||||||||||
Sbjct 24 TCCAAG-GCAAAAACCTTCAAATCCCCAACCAAAACTCCAACTAAAATGTATCGCAAATC 82
Query 72 GTATCTATCACCATCTTCAACCTCACTCA---CTCCTCAAACCCCAGAAACTCTAACTCC 128
||||||||| ||||||||||| ||||||| |||||||||||||||||||||| |||||
Sbjct 83 GTATCTATCTCCATCTTCAACTTCACTCACTCCTCCTCAAACCCCAGAAACTCTCACTCC 142
Query 129 TCTTCGTAGATCCGCTCGTCATGTTTCTCGAAAAATCGATCTGGGAAATGACCCAATCGA 188
|||||||||||| ||||||| ||||| || |||||| ||||||||||||||||||||||
Sbjct 143 TCTTCGTAGATCTTCTCGTCACGTTTCCCGTAAAATCAATCTGGGAAATGACCCAATCGA 202
Query 189 TGTTCCAGGAAGAGAATCAATCGAAGAAATGAATCTAATTCGAAAACGAGAACGAGCGCC 248
| ||||||||| ||||||| |||||||||| ||||||||| ||| || | ||
Sbjct 203 TCTTCCAGGAAAAGAATCAGTCGAAGAAATCAATCTAATT------CGA-AA--A---CC 250
Query 249 GAGAAAACCAACCACTGATGTTGTTCCAGAGAAGTCGACGAAATCAGAAACTCCgaagaa 308
||||||| ||||| |||| ||||| || | | | || || | | |||
Sbjct 251 TAGAAAACGAACCAATGATATTGTT--------GTTG-C---A-GAG-AAGT-C---GAA 292
Query 309 gaagaagaagaTCGATTCGGAAGTTTCCTTCTCTCCTGTTTCTCCAATTCGATCTGAGAC 368
|||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct 293 GAAGAAGAAGATAGATCCGGAAGTTTCCTTCTCTCCTGTTTCACCAATTCGATCTGAGAC 352
Query 369 GATTAAGAAGACGATTAAGAAGAGAGTTTATTACAATAAAGTCGAATTCGATGAAACCGA 428
|| |||| || || |||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 353 GAAGAAGACGAAGAAGAAGAAGAGAGTTTATTACAACAAAGTCGAATTCGACGAAACCGA 412
Query 429 ATTCGAAATCGGTGATGATGTTTATC-TTaagagaagagaagacgcgaattcagat---- 483
|||||||||||||||||||||||| | |||| |||| ||||||||||||| |||||
Sbjct 413 ATTCGAAATCGGTGATGATGTTTA-CGTTAAAAGAACAGAAGACGCGAATCCAGATGAAG 471
Query 484 --gaagaagaagatccagaaattgaagattgtcagattTGTTTCAAATCGGATACT-A-A 539
|||||||||||||||||||| |||||||||||||| || |||||||| ||||| | |
Sbjct 472 AAGAAGAAGAAGATCCAGAAATCGAAGATTGTCAGATCTGCTTCAAATCACATACTAACA 531
Query 540 C-ATAATGATTGAGTGTGATGATTGTTTAGGTGGATTTCATTTGAAATGCTTGAAACCGC 598
| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 532 CAATAATGATTGAATGTGATGATTGTTTAGGTGGATTTCATTTGAATTGCTTGAAACCGC 591
Query 599 CGTTGAAGGAAGTTCCAGAAGGTGATTGGATCTGTCAATTTTGTGAGGTTAAAAAGTCAG 658
| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 592 CATTGAAGGAAGTTCCTGAAGGTGATTGGATCTGTCAATTCTGTGAGGTTAAAAAGTCAG 651
Query 659 GTCAAACAACACTTGT-G--GTTCCTAAGCCACCGGAAGGGAAGAAATTAGCGAGAACGA 715
||| | ||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 652 GTC--A-AACACTTGTGGTTGTTCCTAAGCCACCGGAAGGGAAGAAATTAGCGAGAACGA 708
Query 716 TGAGGGAGAAGCTTCTTTCCGGTGATTTATGGGCGGCTCGAATCGAGAAGTTGTGGAAAG 775
||| |||||||||||| || ||||||||||||| |||||||| ||||||||||||||||
Sbjct 709 TGAAGGAGAAGCTTCTCTCTAGTGATTTATGGGCTGCTCGAATTGAGAAGTTGTGGAAAG 768
Query 776 AAGTTGATGATGGTGGTTGTGTGTATTGGATTAGAGCTCGTTGGTATATGATACCTGAAG 835
|||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 769 AAGTTGATGA---T-G--GTGTGTATTGGATTAGAGCTCGTTGGTATATGATACCTGAAG 822
Query 836 AGACGGTTTCAGGGCGTCAACCG-CATAATTTGAAGCGCGAGCTTTATTTGACGAATGAT 894
||||||||| |||| | ||| || |||||| |||| || |||||||||||||||||||||
Sbjct 823 AGACGGTTTTAGGGAGACAA-CGTCATAATCTGAAACGAGAGCTTTATTTGACGAATGAT 881
Query 895 TTTGCTGATGTAGAGATGGAATGTATTCTTAGGCATTGTTTTGTCAAGTGTCCTAAGGAG 954
||||||||| |||||||||||||| ||||||||||||||||||| || ||||||||||||
Sbjct 882 TTTGCTGATATAGAGATGGAATGTGTTCTTAGGCATTGTTTTGTGAAATGTCCTAAGGAG 941
Query 955 TTTTCGAAAGCGAGTAATGATGGTGATGATGTGTTTTTGTGTGAGTATGAGTATGATGTG 1014
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 942 TTTTCGAAAGCTAGTAATGATGGTGATGATGTGTTTTTGTGTGAGTATGAGTATGATGTT 1001
Query 1015 CATTGGCGTAGTTTTAAGCGTTTGGCCGAATTGGCTGATGGAGATTCTGATAGTGATCAA 1074
|||||| |||| ||||||||| |||| |||||||||||||||||| ||||||||||||
Sbjct 1002 CATTGGGGTAGCTTTAAGCGTGTGGCTGAATTGGCTGATGGAGATGAGGATAGTGATCAA 1061
Query 1075 GAGTGGAATGGTAGGAAAGAGGAGGAGATTGATGATAGTGATGAAGAGATGGAGTTTGAT 1134
|| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct 1062 GAATGGAATGGTAGGAAAGAGGAGGAGATTGATTATAGTGATGAAGAGATTGAGTTTGAT 1121
Query 1135 GACGAAGTTTCGAAGAGTAAGCGAGGATGTTTAACG-AGTGCAA--GAGGAGGTGCGAAT 1191
|| ||| | ||||| || || |||| || || | || |||| ||||| |||
Sbjct 1122 GATGAA-----G-AGAGTGTTCGTGG-GGTTT--CGAAGAGTAAGCGAGGTGGTGCAAAT 1172
Query 1192 TCTCGTAAAGGGCGTTTCTTTGGTCTTGAGAAGGT-GGGAGCAAAGCA-GATTCCTGAAC 1249
||||||||||||||||||||||| ||||||||||| |||| ||| | |||||||||||
Sbjct 1173 TCTCGTAAAGGGCGTTTCTTTGGGCTTGAGAAGGTGGGGA-TGAAG-AGGATTCCTGAAC 1230
Query 1250 ATGTGAGATGTCATAAGCAAACTGAGTTAGAAAAGGCGAAAGCTACTTTGTTGTTGGCTA 1309
||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||
Sbjct 1231 ATGTGAGATGTCATAAGCAGAGTGAGTTAGAAAAGGCGAAGGCTACTTTGTTGTTGGCTA 1290
Query 1310 CACGTCCTAAGTCTCTTCCTTGTAGAAGCAAAGAAATGGAAGAGATCACTGCATTTATAA 1369
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1291 CACGTCCTAAGTCACTTCCTTGTAGAAGCAAAGAAATGGAAGAGATCACTGCGTTTATAA 1350
Query 1370 AAGGTTCAATCTCGGATGATCAGTGTTTAGGAAGATGTATGTATATTCATGGTGTTCCCG 1429
|||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1351 AAGGCTCAATCTCTGATGATCAGTGTTTAGGTAGATGTATGTATATTCATGGTGTTCCCG 1410
Query 1430 GGACTGGGAAGACGATTAGTGTATTATCGGTTATGAAGAATCT-AAAGGCTGAGGTTGAA 1488
| ||||||||||| |||||||| ||||| |||||||||||||| ||| ||||||||||||
Sbjct 1411 GTACTGGGAAGACTATTAGTGTGTTATCTGTTATGAAGAATCTGAAA-GCTGAGGTTGAA 1469
Query 1489 GAGGGAAGCGTTAGCCCATATTGCTTTGTGGAGATCAATGGTCTCAAATTGGCTTCACCT 1548
| ||||||||| || |||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 1470 GCGGGAAGCGTAAGTCCATATTGCTTTGTGGAGATAAATGGTCTCAAATTGGCTTCTCCT 1529
Query 1549 GAGAACATTTACAGCGTTATCTATGAAGCGTTGAGTGGTCATCGAGTCA-GTTGGAAGAA 1607
|||||||||||||| ||||||||||| | ||||||||||||||| || | ||||||||||
Sbjct 1530 GAGAACATTTACAGTGTTATCTATGAGGGGTTGAGTGGTCATCGTGT-AGGTTGGAAGAA 1588
Query 1608 AGCTCTACAGTCTTTAAATGAGAGGTTTGCAGAAGGAAAAAGGATTGGTAAAGAAG-ATG 1666
||||||||||||| | ||||||||||||||||| ||||||| ||| ||||||| || |||
Sbjct 1589 AGCTCTACAGTCTCTGAATGAGAGGTTTGCAGAGGGAAAAAAGATAGGTAAAG-AGAATG 1647
Query 1667 AGAAGCCTTGCATACTTCTCATCGACGAACTTGATCTTCTAGTAACTAGAAACCAGTCGG 1726
| |||||||||||||||||||||||||| |||||| ||||||| |||||||| ||||| |
Sbjct 1648 AAAAGCCTTGCATACTTCTCATCGACGAGCTTGATGTTCTAGTCACTAGAAATCAGTCTG 1707
Query 1727 TTTTATACAATATTCTGGATTGGCCTACCAAGCCTAACTCCAAATTGGTTGTGTTGGGAA 1786
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1708 TTTTATACAACATTTTGGATTGGCCTACCAAGCCTAACTCCAAATTGGTTGTGTTGGGAA 1767
Query 1787 TAGCAAACACGATGGATCTTCCAGAGAAGCTGCTTCCTCGAATTTCAAGCCGAATGGGTA 1846
|||||||||| |||||||||||||||||| |||||||||| || ||||||||||||||||
Sbjct 1768 TAGCAAACACTATGGATCTTCCAGAGAAGTTGCTTCCTCGGATATCAAGCCGAATGGGTA 1827
Query 1847 TACAGAGACTATGTTTCGGTCCTTATAACCACACTCAGCTACAAGAAATCATTTCTACAA 1906
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1828 TACAGAGACTGTGTTTCGGTCCTTATAACCACAGGCAGCTACAAGAAATCATTTCTACAA 1887
Query 1907 GGTTGAAAGGAATCAATGCTTTTGAGAAGACAGCTATTGAATTTGCTTCGAGAAAAGTAG 1966
||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1888 GGTTGGAAGGAATCAATGCTTTTGAGAAGACAGCTATCGAATTTGCTTCAAGAAAAGTAG 1947
Query 1967 CTGCTATTTCAGGAGATGCAAGACGTGCGCTTGAGATATGCAGGCGAGCTGCAGAAGTAG 2026
|||| || ||||||||||||||||| |||||||||||||||||||| || || |||||||
Sbjct 1948 CTGCGATATCAGGAGATGCAAGACGCGCGCTTGAGATATGCAGGCGTGCAGCGGAAGTAG 2007
Query 2027 CGGATCACCGTCTAAAGA-G--TAACAAAACTGCAAAGAATCAGCTGGTAATTATGGCAG 2083
||||| |||||||||||| | ||||| | ||||||||| ||||||||| ||||||||||
Sbjct 2008 CGGATTACCGTCTAAAGAAGAGTAACATATCTGCAAAGAGTCAGCTGGTGATTATGGCAG 2067
Query 2084 ATGTTGAAACAGCTATTCAAGAGATGTTTCAGGCACCTCATATTCAAGTTATGAAGAGCG 2143
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2068 ATGTTGAAGTAGCCATTCAAGAGATGTTTCAGGCACCTCATATTCAAGTTATGAAGAGTG 2127
Query 2144 TATCGAAACTGAGTAAGATCTTCTTGACGGCTATGGTTCACGAGCTTTACAAAACAGGAA 2203
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2128 TATCGAAACTGAGTAGGATCTTCTTGACGGCTATGGTTCATGAGCTTTACAAAACAGGAA 2187
Query 2204 TGGCAGAGACAACCTTTGACCGAGTGGCAACAACAGTATCATCTATTTGCTTAACCAATG 2263
|||||||||||| ||||||| |||| |||||||||||||| |||||||||||||||||||
Sbjct 2188 TGGCAGAGACAAGCTTTGACAGAGTAGCAACAACAGTATCGTCTATTTGCTTAACCAATG 2247
Query 2264 GAGAAGCTTTTCCAGGTTGGGACATTCTTCTCAAAATCGGTTGCGATCTTGGTGAATGTA 2323
| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 2248 GTGAAGCTTTTCCCGGTTGGGACATTCTTCTCAAAATCGGTTGTGATCTTGGTGAATGCA 2307
Query 2324 GAATCATTCTCTGTGAACCTGGAGAGAAGCATAGATTGCAGAAGCTGCAGCTGAATTTTC 2383
||||| |||| |||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 2308 GAATCGTTCTTTGTGAACCTGGAGAGAAGCACAGATTGCAGAAGCTGCAGCTTAATTTTC 2367
Query 2384 CAAGTGATGATGTTGCTTTTGCATTGAAAGATAACAAGGATCTTCCATGGCTGGCCAATT 2443
||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||
Sbjct 2368 CAAGTGATGATGTTGCTTTTGCATTGAAAGACAATAAGGATCTTCCATGGTTGGCCAATT 2427
Query 2444 ACTTGTGAGTTTTTT 2458
|||||||| ||||||
Sbjct 2428 ACTTGTGA-TTTTTT 2441
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121955838433
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5