BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490115
Length=2515
Score E
Sequences producing significant alignments: (Bits) Value
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 3936 0.0
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superf... 1081 0.0
> AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2434907-2439403 REVERSE LENGTH=2625
Length=2625
Score = 3936 bits (2131), Expect = 0.0
Identities = 2390/2517 (95%), Gaps = 10/2517 (0%)
Strand=Plus/Plus
Query 1 TCTTCTTCTTCTCGATATCACTTGAGATTCGAACATGGTTGTCTCAAAGGCTAACAAAAG 60
||||| ||||||| || |||||||| || ||||||||||||||||||||| |||||||||
Sbjct 26 TCTTCATCTTCTCAATCTCACTTGAAATCCGAACATGGTTGTCTCAAAGGTTAACAAAAG 85
Query 61 CTTATTAAGCGCAGTCTTCAAATCCCGTATTAGAAACACCGGCGAATCTTCAATTGCTTC 120
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 86 CTTATTAAGTTCAGTCTTCAAATCCCGTATTAGACCCACCGGCGAATCTTCAATTGCTTC 145
Query 121 CGGCAACAAAGACATCGCCGGAACTTCTCAAGCTGTTAAAGATCTTCTCTGTTCCAAATA 180
|||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |
Sbjct 146 CGGCAACAAAGACATCGCCGGAACTTCTCAAGCTGTCAAAGATCTTCTCTCTTCCAAAAA 205
Query 181 TTCTTCGTCAGATCTTGAGGAAGCACCGTTACAGGATCGAGTATCGAATTTGTTACATGT 240
||||| |||||||||||||||||| | ||||| |||||||||||||| |||||||||||
Sbjct 206 CTCTTCCTCAGATCTTGAGGAAGCATCATTACAAGATCGAGTATCGAAATTGTTACATGT 265
Query 241 AACAACATCGGAGAAAAGCTCTTTGGAGAAGAACTTGGTTTTGAAGATACCAAGTTTTAC 300
||||||||| || ||||||||||||||||||||||| |||| |||||||||||||| ||
Sbjct 266 AACAACATCAGATAAAAGCTCTTTGGAGAAGAACTTATTTTTAAAGATACCAAGTTTCAC 325
Query 301 CCCTAAGATCCCTTATGATATTTCGTTAAGATCGAAAGAGTTGTCTCCCGAAAGGAAGGA 360
| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||
Sbjct 326 CACTAAGATCCCTTATGATATTTCGTTAAGAACGAAAGAGTTGTCTCGTGAAAGGAAAGA 385
Query 361 GAGACGTGTTTACAAGAAGAACGGGT-TGTCACGGCGTTTCGCAAAGATATTTAGAGACT 419
|||||||||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||
Sbjct 386 GAGACGTGTTTACAAGCAGAAC-GGTCTGTCACGGCGTTTCGCTAAGATATTTAGAGACT 444
Query 420 CTGCTCAGAAATTAGGCACTGAGGCTATGTTTGGTGCTTTTGATAGGGTAGCGAAAGAGA 479
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 445 CTGCTCAGAAATTAGGCACTGAGGCTATGTTTGGTGCTTTTGATAGAGTAGCTAAAGAGA 504
Query 480 TGAGTGTAACGGAATATAATGCGATGATTGGAGTTTACTTGGAGCATGCGGAGAAAAGCA 539
||||||| || || || ||||| |||||||| |||||||| |||||||| ||||||||||
Sbjct 505 TGAGTGTGACAGAGTACAATGCAATGATTGGTGTTTACTTAGAGCATGCTGAGAAAAGCA 564
Query 540 ATGATTTAGATTATGCTCTTGGCCACATTGAGAAGGCTTTTGAGCTTTTGAAATCTATGA 599
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 565 ATGATCTAGATTATGCTCTTGGCCATATTGAGAAGGCTTTTGAGCTTTTGAAATCTATGA 624
Query 600 GAGATCGCGGATTCTTGATTGAAGAAAGAGTTTATGGTCCTATTCTTGGTTATTTAATTG 659
||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 625 GAGATCGTGGATTTTTGATTGAAGAAAGAGTTTATGGTCCTCTTCTTGGTTATTTGATTG 684
Query 660 ATATGGATATGGTAGAGGAGTTCCAAAGTTTTAAGGATGTGATTAGGGAGGCCAGTCTTG 719
||||||||||||||| ||||| || ||||| |||||||||||||||||||| |||| |
Sbjct 685 GTATGGATATGGTAGATGAGTTTCATAGTTTCAAGGATGTGATTAGGGAGGCTAGTCCCG 744
Query 720 GTTCGGTTGAGAGACTTGGTTACTATGAAATGCTTCTTTGGATCCAACTTGGTGATGGAG 779
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 745 GTTCCGTTGAGAGACTTGGTTACTATGAAATGCTTCTTTGGATCCATCTTGGTGATGGAG 804
Query 780 AGAAGATTGAGGAGCTTTGTGA-TACAATTGATGGTGATAATAGG-GAAAGCTTATCAAT 837
||||||||||||| ||||| | |||||||||||||||||| || |||||||||||| |
Sbjct 805 AGAAGATTGAGGAACTTTG-CAGTACAATTGATGGTGATAA-CGGTGAAAGCTTATCAGT 862
Query 838 CTTACAAGAAAATTATCTGCTTGCACTATGTAAAAAGGACCAAACGTACCATCTTGAGAG 897
||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct 863 CTTGCAAGAAAATTATCTGCTTGCACTATGTAAAAAAGACCAAAAGTACCATCTTGAGAG 922
Query 898 GCTCTTAGGGATTGTAGACATAACAAAAGTTCAATCGTCGGACCTA-TGGACAAACATAT 956
|||||||| ||||||||||||||||||||||| |||||||||||| ||| |||||||||
Sbjct 923 GCTCTTAGAGATTGTAGACATAACAAAAGTTCGTTCGTCGGACCTATTGG-CAAACATAT 981
Query 957 TTGAGTACCTTGGGAGGTTTTCATTGGATTCTGTTGCGGGGAAG-TTCCTTTGGGAGCTA 1015
|||| || ||||||||||||||||||||||||||||| | | || |||||||||||||||
Sbjct 982 TTGAATATCTTGGGAGGTTTTCATTGGATTCTGTTGC-GAGTAGATTCCTTTGGGAGCTA 1040
Query 1016 AGAGAAAGTGATGGAGGAGTGACGAACGTTTCTGAACTCATCTCTATCTATTCTACTTGC 1075
||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct 1041 AGAGAAAGTGATGAAGGAGTGAAGAACGTTTCTGATCTCATCTCTATCTATTCTACTTGC 1100
Query 1076 ACCCCAAATCCGACGGTTGAGGATACCATCTTGAAATTTAACAAGATGCATGAAGAACTT 1135
||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1101 ACCCCAAATCCAACGGTTGAGGATACAATCTTAAAATTTAACAAGATGCATGAAGAACTT 1160
Query 1136 GATGTTATGCCTTCATCTACATCGTACGAAAAGCTTGTTAAGTATAGCTGTGACTCGAAT 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1161 GATGTTATGCCTTCATCTACATCGTACGAAAAGCTTGTTAAGTATAGCTGTGACTCGAAT 1220
Query 1196 GAGGTAGTCACTGCTCTTGATATAGTTGAAAAAATGGGTGAAGCAGGTCTGATAATATCC 1255
||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||
Sbjct 1221 GAGGTAGTCACTGCTCTTGATGTAGTTGAAAAAATGGGTGAAGCAGGTTTGATGATATCC 1280
Query 1256 GCAGATATCCTACATTCATTGTTACATGCCATTGATGAAGTTCTTGAGTTTGATTTGGTG 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1281 GCAGATATCCTACATTCATTGTTACATGCCATTGATGAAGTTCTTGAGTTTGATTTGGTG 1340
Query 1316 CGAAGAATCCATTCAATTATGTGCACAAAAAGTGTGAAACCAAATACTGAGAACTTCCGG 1375
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 1341 CGAAGAATCCATTCAATTATGTGCACAAAGAGTGTGAAACCTAATACTGAGAACTTCCGG 1400
Query 1376 AGCATTATACGTTTGTGCACAAGAATCAAAGATTTTGAAGGTGCATATACTATGCTTGGT 1435
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1401 AGCATTATACGTTTGTGCACAAGAATCAAAGATTTTGAAGGTGCATATAATATGCTTGGT 1460
Query 1436 AATTTAAAAAACTTCAATTTGGAACCGAACTCTAGCATGTTCAATTGTATATTGGCTGGA 1495
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1461 AATTTAAAGAACTTCAATTTGGAACCAAACTCTAGCATGTTCAATTGTATATTGGCTGGA 1520
Query 1496 TATTTTAGGGAGAAAAATGTGAGTAGGGCGTTAATGGTCGTCAAGCAAATGAAGGAAGCT 1555
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1521 TATTTTAGGGAGAAAAATGTGAGTAGTGCGTTAATGGTCGTCAAGCAAATGAAGGAAGCT 1580
Query 1556 GGCGTTAAACCTGATTCCATAACTTTTGGTTATCTAATAAACAACTGTAAACGGGAGGAC 1615
||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1581 GGCGTTAAACCTGATTCCATAACTTTTGGTTATCTAATAAACAACTGTACCCAGGAGGAC 1640
Query 1616 GCTATTACTAAGTACTACGACGAGATGAAGCAAGCAGGAGTTCAAGCTACTAAGCGAATT 1675
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 1641 GCTATTACTAAGTACTATGAGGAGATGAAGCAAGCAGGAGTTCAAGCTACTAAGCGAATT 1700
Query 1676 TACATGTCCCTGATAGATGCATATGCAGCATCTGGGAAGTTTGAGAAGGCGAAACAGGTG 1735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1701 TACATGTCCCTGATAGATGCATATGCAGCATCTGGGAAGTTTGAGAAGGCGAAACAGGTG 1760
Query 1736 CTCGTAGATCCAGATGTTCCGGCTATAAACCAAAATGAACTGAAAAGTGTGCTTATTTCG 1795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1761 CTCGTAGATCCAGATGTTCCGGCTATAAACCAAAATGAACTGAAAAGTGTGCTTATTTCG 1820
Query 1796 GCTCTTGCATCACGTGGAAAATGGGCAGATGCCTTACATATATATGAAGAAATGAGGAAA 1855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1821 GCTCTTGCATCACGTGGAAAATGGGCAGATGCCTTACATATATATGAAGAAATGAGGAAA 1880
Query 1856 GCTGAATGCCACGTAGACCCGAAATCGATTATATCTCTTATAGAATACTCTGATTCAAAT 1915
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1881 GCCGAATGCCACGTAGACCCGAAATCGATTATATCTCTTATAGAATACTCTGATTCAAAG 1940
Query 1916 GGAGAGTTAAGTACGCTAGTTCAACTGGCTGATGACCTACAAGATGATACTAGTTGGATA 1975
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1941 GGAGAGTTAAGTACGCTAGTTCAACTGGCTGATGACCTACAAGATGATACTAGTTGGATC 2000
Query 1976 GATGGTTTCTTCAGAATGATCTTGTTCGCTGTCCGCAATAGAAAGTCTAGCAATATTGTT 2035
|| ||||||||||||||||| ||||||||||||||||||| |||||| ||| ||||||||
Sbjct 2001 GACGGTTTCTTCAGAATGATTTTGTTCGCTGTCCGCAATAAAAAGTCAAGCGATATTGTT 2060
Query 2036 GATTTGCTGAAACAGAACAAGGTCCGGTTGTTAAAGAAAGACTTGCCTGTGGAAACTCAT 2095
||| ||||||||| |||||||||||||||||||||||||| | | ||||||||| |||||
Sbjct 2061 GATCTGCTGAAACGGAACAAGGTCCGGTTGTTAAAGAAAGGCATACCTGTGGAAGCTCAT 2120
Query 2096 TTTGACGAGGTGTTTTGGGCAATCGCAGAGACAGAGCCAACCAAAGTGCAGCTAGGAATG 2155
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 2121 TTTGACGAGGTGTTTTGGGCAATCGCAGAGACAGAGCCATCCAAAGTGCATCTAGGAATG 2180
Query 2156 GATTTGCTAAGATTTATGAAAGATGAGCTTGGGTTTGTTCCTTCAAGAAAATGTCTAGAT 2215
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2181 GATTTGCTAAGATTTATGAAAGATGAGCTCGGGTTTGTTCCTTCAAGAAAATGTCTAGAT 2240
Query 2216 TTTCTCTTACATGCATGTGTTAATGCCAAGGACCTGGAGCACGGCCTATTGGTGTGGAAA 2275
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2241 TTTCTCTTACATGCATGTGTTAATGCCAAGGACCTGGAGCACGGTCTATTGGTGTGGAAA 2300
Query 2276 GAGTACCAATCTGCAGCACTCCCTTGCAACGTCCTAAGCTTTCTGAGGATGTATCAGGTT 2335
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 2301 GAGTACCAATCTGCAGCATTCCCTTGCAACGTCCTGAGCTTTCTGAGGATGTATCAGGTT 2360
Query 2336 CTACTAGCTGCAGGGGATTCGGAAGGTGCCAAGGCATTGGTATCAAAAATTCCAAAAGAT 2395
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 2361 CTACTAGCTGCAGGGGATTCAGAAGGTGCCAAGGCATTGGTGTCAAAAATTCCAAAAGAT 2420
Query 2396 GATAAAGATGTACAACATATCATCGAAGAAAGTCAGTCTGCATTTTCTCAAGCACCCAAC 2455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2421 GATAAAGATGTACAACATATCATCGAAGAAAGTCAGTCTGCATTTTCTCAAGCACCCAAC 2480
Query 2456 AAGAAGAAACCAAAAAAGAAAACGATTGTTTCATCAAGAAAGTAGTGATTTTGTACA 2512
|||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct 2481 AAGAAGAAACCAAAAAAGAAAATGATTGTTTTATCAACAAAGTAGTGATTTTGTACA 2537
> AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:11604986-11610651 FORWARD LENGTH=2702
Length=2702
Score = 1081 bits (585), Expect = 0.0
Identities = 1503/1933 (78%), Gaps = 115/1933 (6%)
Strand=Plus/Plus
Query 535 AAGCAATGATTTAGATTATGCTCTTGGCCACATTGAGAAGGCTTTTGAGCTTTTGAAATC 594
|||||||||| ||| |||||||||| || |||| ||||||| |||| | | | |||
Sbjct 731 AAGCAATGATGCAGAATATGCTCTTGATCAAATTGGGAAGGCTATTGAACATCTCAAAGA 790
Query 595 TATGAGAGATCGCGGATTCT-TGATTGAAGAAAGAGTTTATGGTCCTATTCTT-GGTTAT 652
|||||| | | ||||||| | |||| |||| ||| |||||| ||| || || | ||
Sbjct 791 AATGAGACAGCTTGGATTCTCT-ATTGGAGAAGGAGCTTATGGCCCTTTTTTTAAG-TAC 848
Query 653 TTAATTGATATGGATATGGTAGAGGAGTTCCAAAGTT-TTAAGGATGTGATTAGGGAGGC 711
||| |||||||||| ||||||| ||||||||||| || | |||||| | |||| |||||
Sbjct 849 TTAGTTGATATGGAAATGGTAGCGGAGTTCCAAA-TTCTCAAGGATTTTATTAAGGAGG- 906
Query 712 CA-GTCTTG-GTTCGGT-TGAGAGACTTGGT-TACTATGAAATGCTTCTTTGGATCCAAC 767
|| ||| || | || | || ||||||| || |||||||||||||||||||||||||||
Sbjct 907 CATGTCCTGAG-TC-TTGTGGGAGACTT-GTCTACTATGAAATGCTTCTTTGGATCCAAG 963
Query 768 TTGGTGATGGAGAGAAGATTGAGGAGCTTTGTGATACAATTGATGGTGATAATAGGG-AA 826
| || | ||||||||| | | ||||| ||| || | || ||||| | ||| |
Sbjct 964 TCAACGACGAAGAGAAGATCCACAAACTTTGCAATA-AA--GTTGATGATAGT-GGGCTA 1019
Query 827 AGCTTATCAATCTTACAAGAAAATTATCTGCTTGCACTATG-TAAAAAGGACCA--AACG 883
|| ||||||||| |||||||| ||||| || ||||||| || | ||| || || || |
Sbjct 1020 AGTTTATCAATCCTACAAGAATATTATTTGGTTGCACTGTGCGAGAAA-GA-CAGTAA-G 1076
Query 884 TACCATCTTGAGAGGCTCTTAGGGATTGTAGACATAACAAAAGT-TCAATCGTCGGAC-C 941
| || || ||| ||| |||| ||||| |||||||||| ||| || || | ||| |
Sbjct 1077 GAAAATTTTCAGAAGCTGTTAGAAATTGTCGACATAACAACAGTATC-TTCACCAGACGC 1135
Query 942 TATGGACA-AACATATTT-GAGTACCTTGGGAGGTTTTC-ATTGGATTCTGTTGCGGGGA 998
|| || | | ||||||| || |||||| ||| | | ||||| |||||||| ||
Sbjct 1136 -ATTGA-AGAGCATATTTGGA-TACCTT-GGAAAATCGCTGTTGGAGTCTGTTGCAATGA 1191
Query 999 AGTTCCTTTGGGAGCTAAGAGAAAGT-G-ATGGA-GGAGT-GACGAAC-GTTTCTGAA-C 1052
|| | |||||||| |||||||| || | | || ||||| || | || ||||| || |
Sbjct 1192 AGCTACTTTGGGAACTAAGAGACTGTCGTAAAGATGGAGTGGA-G-ACAGTTTC-AAATC 1248
Query 1053 TCAT-CTCTATCTATTCTACTTGCACCCCAAATCCGACGGTTGAGGATACCATCTTGAAA 1111
|||| || | |||| | || |||| ||||||| | ||||| |||||| |||| || ||
Sbjct 1249 TCATATTC-AGCTATGCAACCTGCATCCCAAATTCAACGGTAGAGGATGCCATTTTCAAG 1307
Query 1112 TTTAACAAGATGCATGAAGAACTTGATGTTATGCCTTCATCTACATCGTACGAAAAGCTT 1171
||||||||| ||||||||||||| ||| | |||||||||||||||| || || || |||
Sbjct 1308 TTTAACAAGTTGCATGAAGAACTAGATATCGTGCCTTCATCTACATCTTATGAGAATCTT 1367
Query 1172 GTTAAG-TATAGCTGTGACTCGAATGAGGTAGTCACTGCTCTTGATATAGTTGAAAAAAT 1230
| | || ||| |||| ||| |||||||| |||||||||||||||||||||||||| ||
Sbjct 1368 G-TCAGTTATCTTTGTGGCTCAAATGAGGTGGTCACTGCTCTTGATATAGTTGAAAATAT 1426
Query 1231 GGGTGAAGCAGGTCTGATAATATCCGCAGATATCCTACATTCATTGTTACATGCCATTGA 1290
| |||||||||||||| ||||||| ||| | ||||| || ||||||||||| ||||||||
Sbjct 1427 GTGTGAAGCAGGTCTGGTAATATCAGCAAACATCCTGCACTCATTGTTACAGGCCATTGA 1486
Query 1291 TGAAG-TTCTTGAGTTTGATTTGGTGCGAAGAATCCATTCAATTATGTGC-ACAAAAAGT 1348
| || ||||||||||| ||||||||| ||||||| ||||||| ||| || || || |||
Sbjct 1487 -GCAGATTCTTGAGTTTAATTTGGTGCAAAGAATCTATTCAATAATGAGCAAC-AAGAGT 1544
Query 1349 GTGAAACCAAATACTGAGAAC-TTCCGGAGCAT-TATACGTTTGTGCACAAGAATCAAAG 1406
||||| ||||||| |||| || ||| ||| || |||| |||||||| |||||||||||
Sbjct 1545 GTGAAGCCAAATAGTGAG-ACTTTCAGGA-AATCTATAAATTTGTGCATAAGAATCAAAG 1602
Query 1407 ATTTTGAAGGTGCATATA-CTATGCTTGGTAATTTAAAAAACTTCAATTTGGAACCGAAC 1465
|||||||||||||||||| | ||||||||||||||||| || |||||||||| |||||||
Sbjct 1603 ATTTTGAAGGTGCATATAAC-ATGCTTGGTAATTTAAAGAATTTCAATTTGGCACCGAAC 1661
Query 1466 TCTAGCATGTTCAATTGTATATTGGCTGGATATTTTAGGGAGAAAAATGTGAGTAGGGCG 1525
|||||||||| ||||| |||| |||| |||||||| |||||||||| |||| || ||
Sbjct 1662 TCTAGCATGTACAATTCTATAATGGCAGGATATTTCCGGGAGAAAAAAGTGAACAGTGCC 1721
Query 1526 TTAATGGTCGTCAAGCAAATGAAGGAAGCTGGCGTTAAACCTGATTCCATAACTTTTGGT 1585
|||| |||| ||||| ||||||| ||||||| |||||||||||||| | |||||| |
Sbjct 1722 TTAAAGGTCCTCAAGGAAATGAAAGAAGCTGATGTTAAACCTGATTCGGTGACTTTTAGC 1781
Query 1586 TATCTAATAAACAACTGTAAACG-GGAGGACG-CTATTACTAAGTACTACGACGAGATGA 1643
|||||||||||| | ||| || ||||| || ||||| | ||||| || | |||||||
Sbjct 1782 TATCTAATAAACTATTGTGG-CGAGGAGG-CGACTATTGCGAAGTATTATAAGGAGATGA 1839
Query 1644 AGCAAGCAGGAGTTCAAGCTACTAAGCGAA-TTTACATGTCCCT-GATAGATGCATATGC 1701
|||||||||||||| ||| || ||||| | ||||||||||||| | || | ||||||||
Sbjct 1840 AGCAAGCAGGAGTTGAAGTTAATAAGC-ACGTTTACATGTCCCTTGTTAAA-GCATATGC 1897
Query 1702 AGCAT-CTGGGA-AGTTTGAGAAGGCGAAACAGGTGCTCGTAGATCCAG-ATGTTCCGGC 1758
| ||| | || | ||||||| ||||| |||||||||||| | || || | | ||||||||
Sbjct 1898 ATCATGC-GG-ACAGTTTGAAAAGGCAAAACAGGTGCTCATGGA-CCTGGAAGTTCCGGC 1954
Query 1759 TATAA-ACCAAAATGAACTGAAAAGTGTGCTTATTTCGGCTCTTGCATCACGTGGAAA-A 1816
|| | | || ||||| ||||||||||| ||||| || ||||| |||||| |||||| |
Sbjct 1955 TA-AGGATCACAATGAGCTGAAAAGTGTACTTATATCTGCTCTGGCATCAAATGGAAATA 2013
Query 1817 TGGGCAGATGCCTTACA-TATATATGAAGAAATGAGGAAAGCT--GAATGCCACGTAGAC 1873
| |||| || ||| | ||| ||||||||||||| |||| || | |||| ||||||
Sbjct 2014 TAA-CAGAGGCTTTA-AGTATTTATGAAGAAATGAAGAAA-CTCCGC-TGCCCCGTAGAG 2069
Query 1874 CCGAAATCGAT-TATATCTCTTATAGA-ATACTCTGATTCAAATGGAGAGTTAAGTACGC 1931
|| ||| | || | ||||||||||||| | ||||||||||||| | |||| | | |||
Sbjct 2070 CCAAAAGCTATCT-TATCTCTTATAGAGA-ACTCTGATTCAAACGCAGAGCTGGGAACGT 2127
Query 1932 TAGTTCAACTGGCTGATGACCTACAAGATGATACTAG-TT--GGATAGATGGTTTCTTCA 1988
| ||| |||| || |||| || | | |||| ||| || ||||||||||||||||||
Sbjct 2128 TGGTTGAACTCACTCATGAGCTGC--G-TGATTCTAAATTTTGGATAGATGGTTTCTTCA 2184
Query 1989 GAATGATCTTGTTCGCTGTCCGCAATAGAAAG-TCTAGCAATATTGTTGATTTGCT-GAA 2046
||| ||| |||| ||||| ||||| | | || || ||| |||| | |||||| | ||
Sbjct 2185 AAATTATCGTGTTTGCTGTTCGCAACA-ATAGATCAAGCTCTATTCTGGATTTGTTAGAG 2243
Query 2047 ACAGAACAAGGTCCGGTTGTTAAAGAAAGACTT-GCCTGTGGAA-ACTCATTTTGACGAG 2104
|||| ||| || |||| ||| | ||| | | ||||||| | | ||| || |||
Sbjct 2244 -CAGACCAAAAACCACTTGTCCAAGGATGACGTCGG-TGTGGAATATTGGTTT-GAAGAG 2300
Query 2105 GTGTTTTGGGCAATCGCAGAGACAGAGCCAACCAAAGTGCAGCTAGGAATGGATTTGCTA 2164
|||||| | |||| || || |||||| | | | ||| || |||| |||| ||| |
Sbjct 2301 GTGTTTAAGTCAATAGCGGAAACAGAGTCTAGTGATGTGAAGGTAGGGCTGGACTTGGTG 2360
Query 2165 AGATTTATGAAAGATGAGCTTGGGTT-TGTTCCTTCAAGAAAATGTCTAGATTTTCT-CT 2222
|| ||||||||||| ||||||| ||| ||| ||||||||||||||||| |||||||| ||
Sbjct 2361 AGTTTTATGAAAGAAGAGCTTGAGTTATGT-CCTTCAAGAAAATGTCTGGATTTTCTTCT 2419
Query 2223 TACATGCATGTGTTAATGCCAAGGACCTGGAGCA-CGGC-CTATTGGTGTGGAAAGAGTA 2280
|||||| ||||| |||||||| || | || | || | ||| |||| ||| |||||||
Sbjct 2420 -ACATGCTTGTGTCAATGCCAAAGATAAGCAG-AGCG-CTCTACTGGTATGGGAAGAGTA 2476
Query 2281 CCAATCTGCAGCACTCCCTTGCAACGTCCT-AAGCT-TTCTGAGGATGTATCAGGTTCTA 2338
||||| ||||| ||| |||| ||| ||| | || || || | ||||||||||||||||||
Sbjct 2477 CCAATGTGCAGAACTTCCTTACAATGTCATCAA-CTATT-TAAGGATGTATCAGGTTCTA 2534
Query 2339 CTAGCTGCAGGGGATTCGGAAGGTGCCA-AGGCATTGGTATCAAAAATTCCAAAAGATGA 2397
|||||||||| |||||| || |||| | ||||| | |||||||| ||||| || |||||
Sbjct 2535 GTAGCTGCAGGAGATTCGAAAAGTGC-AGAGGCAATAGTATCAAAGATTCCTAATGATGA 2593
Query 2398 TAAAGATGTACAA 2410
||||||||| |||
Sbjct 2594 TAAAGATGT-CAA 2605
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 124815354184
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5