BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg490115 Length=2515 Score E Sequences producing significant alignments: (Bits) Value AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 3936 0.0 AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superf... 1081 0.0 > AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:2434907-2439403 REVERSE LENGTH=2625 Length=2625 Score = 3936 bits (2131), Expect = 0.0 Identities = 2390/2517 (95%), Gaps = 10/2517 (0%) Strand=Plus/Plus Query 1 TCTTCTTCTTCTCGATATCACTTGAGATTCGAACATGGTTGTCTCAAAGGCTAACAAAAG 60 ||||| ||||||| || |||||||| || ||||||||||||||||||||| ||||||||| Sbjct 26 TCTTCATCTTCTCAATCTCACTTGAAATCCGAACATGGTTGTCTCAAAGGTTAACAAAAG 85 Query 61 CTTATTAAGCGCAGTCTTCAAATCCCGTATTAGAAACACCGGCGAATCTTCAATTGCTTC 120 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 86 CTTATTAAGTTCAGTCTTCAAATCCCGTATTAGACCCACCGGCGAATCTTCAATTGCTTC 145 Query 121 CGGCAACAAAGACATCGCCGGAACTTCTCAAGCTGTTAAAGATCTTCTCTGTTCCAAATA 180 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | Sbjct 146 CGGCAACAAAGACATCGCCGGAACTTCTCAAGCTGTCAAAGATCTTCTCTCTTCCAAAAA 205 Query 181 TTCTTCGTCAGATCTTGAGGAAGCACCGTTACAGGATCGAGTATCGAATTTGTTACATGT 240 ||||| |||||||||||||||||| | ||||| |||||||||||||| ||||||||||| Sbjct 206 CTCTTCCTCAGATCTTGAGGAAGCATCATTACAAGATCGAGTATCGAAATTGTTACATGT 265 Query 241 AACAACATCGGAGAAAAGCTCTTTGGAGAAGAACTTGGTTTTGAAGATACCAAGTTTTAC 300 ||||||||| || ||||||||||||||||||||||| |||| |||||||||||||| || Sbjct 266 AACAACATCAGATAAAAGCTCTTTGGAGAAGAACTTATTTTTAAAGATACCAAGTTTCAC 325 Query 301 CCCTAAGATCCCTTATGATATTTCGTTAAGATCGAAAGAGTTGTCTCCCGAAAGGAAGGA 360 | ||||||||||||||||||||||||||||| ||||||||||||||| |||||||| || Sbjct 326 CACTAAGATCCCTTATGATATTTCGTTAAGAACGAAAGAGTTGTCTCGTGAAAGGAAAGA 385 Query 361 GAGACGTGTTTACAAGAAGAACGGGT-TGTCACGGCGTTTCGCAAAGATATTTAGAGACT 419 |||||||||||||||| ||||| ||| |||||||||||||||| |||||||||||||||| Sbjct 386 GAGACGTGTTTACAAGCAGAAC-GGTCTGTCACGGCGTTTCGCTAAGATATTTAGAGACT 444 Query 420 CTGCTCAGAAATTAGGCACTGAGGCTATGTTTGGTGCTTTTGATAGGGTAGCGAAAGAGA 479 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 445 CTGCTCAGAAATTAGGCACTGAGGCTATGTTTGGTGCTTTTGATAGAGTAGCTAAAGAGA 504 Query 480 TGAGTGTAACGGAATATAATGCGATGATTGGAGTTTACTTGGAGCATGCGGAGAAAAGCA 539 ||||||| || || || ||||| |||||||| |||||||| |||||||| |||||||||| Sbjct 505 TGAGTGTGACAGAGTACAATGCAATGATTGGTGTTTACTTAGAGCATGCTGAGAAAAGCA 564 Query 540 ATGATTTAGATTATGCTCTTGGCCACATTGAGAAGGCTTTTGAGCTTTTGAAATCTATGA 599 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 565 ATGATCTAGATTATGCTCTTGGCCATATTGAGAAGGCTTTTGAGCTTTTGAAATCTATGA 624 Query 600 GAGATCGCGGATTCTTGATTGAAGAAAGAGTTTATGGTCCTATTCTTGGTTATTTAATTG 659 ||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct 625 GAGATCGTGGATTTTTGATTGAAGAAAGAGTTTATGGTCCTCTTCTTGGTTATTTGATTG 684 Query 660 ATATGGATATGGTAGAGGAGTTCCAAAGTTTTAAGGATGTGATTAGGGAGGCCAGTCTTG 719 ||||||||||||||| ||||| || ||||| |||||||||||||||||||| |||| | Sbjct 685 GTATGGATATGGTAGATGAGTTTCATAGTTTCAAGGATGTGATTAGGGAGGCTAGTCCCG 744 Query 720 GTTCGGTTGAGAGACTTGGTTACTATGAAATGCTTCTTTGGATCCAACTTGGTGATGGAG 779 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 745 GTTCCGTTGAGAGACTTGGTTACTATGAAATGCTTCTTTGGATCCATCTTGGTGATGGAG 804 Query 780 AGAAGATTGAGGAGCTTTGTGA-TACAATTGATGGTGATAATAGG-GAAAGCTTATCAAT 837 ||||||||||||| ||||| | |||||||||||||||||| || |||||||||||| | Sbjct 805 AGAAGATTGAGGAACTTTG-CAGTACAATTGATGGTGATAA-CGGTGAAAGCTTATCAGT 862 Query 838 CTTACAAGAAAATTATCTGCTTGCACTATGTAAAAAGGACCAAACGTACCATCTTGAGAG 897 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct 863 CTTGCAAGAAAATTATCTGCTTGCACTATGTAAAAAAGACCAAAAGTACCATCTTGAGAG 922 Query 898 GCTCTTAGGGATTGTAGACATAACAAAAGTTCAATCGTCGGACCTA-TGGACAAACATAT 956 |||||||| ||||||||||||||||||||||| |||||||||||| ||| ||||||||| Sbjct 923 GCTCTTAGAGATTGTAGACATAACAAAAGTTCGTTCGTCGGACCTATTGG-CAAACATAT 981 Query 957 TTGAGTACCTTGGGAGGTTTTCATTGGATTCTGTTGCGGGGAAG-TTCCTTTGGGAGCTA 1015 |||| || ||||||||||||||||||||||||||||| | | || ||||||||||||||| Sbjct 982 TTGAATATCTTGGGAGGTTTTCATTGGATTCTGTTGC-GAGTAGATTCCTTTGGGAGCTA 1040 Query 1016 AGAGAAAGTGATGGAGGAGTGACGAACGTTTCTGAACTCATCTCTATCTATTCTACTTGC 1075 ||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||| Sbjct 1041 AGAGAAAGTGATGAAGGAGTGAAGAACGTTTCTGATCTCATCTCTATCTATTCTACTTGC 1100 Query 1076 ACCCCAAATCCGACGGTTGAGGATACCATCTTGAAATTTAACAAGATGCATGAAGAACTT 1135 ||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 1101 ACCCCAAATCCAACGGTTGAGGATACAATCTTAAAATTTAACAAGATGCATGAAGAACTT 1160 Query 1136 GATGTTATGCCTTCATCTACATCGTACGAAAAGCTTGTTAAGTATAGCTGTGACTCGAAT 1195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1161 GATGTTATGCCTTCATCTACATCGTACGAAAAGCTTGTTAAGTATAGCTGTGACTCGAAT 1220 Query 1196 GAGGTAGTCACTGCTCTTGATATAGTTGAAAAAATGGGTGAAGCAGGTCTGATAATATCC 1255 ||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||| Sbjct 1221 GAGGTAGTCACTGCTCTTGATGTAGTTGAAAAAATGGGTGAAGCAGGTTTGATGATATCC 1280 Query 1256 GCAGATATCCTACATTCATTGTTACATGCCATTGATGAAGTTCTTGAGTTTGATTTGGTG 1315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1281 GCAGATATCCTACATTCATTGTTACATGCCATTGATGAAGTTCTTGAGTTTGATTTGGTG 1340 Query 1316 CGAAGAATCCATTCAATTATGTGCACAAAAAGTGTGAAACCAAATACTGAGAACTTCCGG 1375 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 1341 CGAAGAATCCATTCAATTATGTGCACAAAGAGTGTGAAACCTAATACTGAGAACTTCCGG 1400 Query 1376 AGCATTATACGTTTGTGCACAAGAATCAAAGATTTTGAAGGTGCATATACTATGCTTGGT 1435 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1401 AGCATTATACGTTTGTGCACAAGAATCAAAGATTTTGAAGGTGCATATAATATGCTTGGT 1460 Query 1436 AATTTAAAAAACTTCAATTTGGAACCGAACTCTAGCATGTTCAATTGTATATTGGCTGGA 1495 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1461 AATTTAAAGAACTTCAATTTGGAACCAAACTCTAGCATGTTCAATTGTATATTGGCTGGA 1520 Query 1496 TATTTTAGGGAGAAAAATGTGAGTAGGGCGTTAATGGTCGTCAAGCAAATGAAGGAAGCT 1555 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1521 TATTTTAGGGAGAAAAATGTGAGTAGTGCGTTAATGGTCGTCAAGCAAATGAAGGAAGCT 1580 Query 1556 GGCGTTAAACCTGATTCCATAACTTTTGGTTATCTAATAAACAACTGTAAACGGGAGGAC 1615 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 1581 GGCGTTAAACCTGATTCCATAACTTTTGGTTATCTAATAAACAACTGTACCCAGGAGGAC 1640 Query 1616 GCTATTACTAAGTACTACGACGAGATGAAGCAAGCAGGAGTTCAAGCTACTAAGCGAATT 1675 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 1641 GCTATTACTAAGTACTATGAGGAGATGAAGCAAGCAGGAGTTCAAGCTACTAAGCGAATT 1700 Query 1676 TACATGTCCCTGATAGATGCATATGCAGCATCTGGGAAGTTTGAGAAGGCGAAACAGGTG 1735 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1701 TACATGTCCCTGATAGATGCATATGCAGCATCTGGGAAGTTTGAGAAGGCGAAACAGGTG 1760 Query 1736 CTCGTAGATCCAGATGTTCCGGCTATAAACCAAAATGAACTGAAAAGTGTGCTTATTTCG 1795 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1761 CTCGTAGATCCAGATGTTCCGGCTATAAACCAAAATGAACTGAAAAGTGTGCTTATTTCG 1820 Query 1796 GCTCTTGCATCACGTGGAAAATGGGCAGATGCCTTACATATATATGAAGAAATGAGGAAA 1855 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1821 GCTCTTGCATCACGTGGAAAATGGGCAGATGCCTTACATATATATGAAGAAATGAGGAAA 1880 Query 1856 GCTGAATGCCACGTAGACCCGAAATCGATTATATCTCTTATAGAATACTCTGATTCAAAT 1915 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1881 GCCGAATGCCACGTAGACCCGAAATCGATTATATCTCTTATAGAATACTCTGATTCAAAG 1940 Query 1916 GGAGAGTTAAGTACGCTAGTTCAACTGGCTGATGACCTACAAGATGATACTAGTTGGATA 1975 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1941 GGAGAGTTAAGTACGCTAGTTCAACTGGCTGATGACCTACAAGATGATACTAGTTGGATC 2000 Query 1976 GATGGTTTCTTCAGAATGATCTTGTTCGCTGTCCGCAATAGAAAGTCTAGCAATATTGTT 2035 || ||||||||||||||||| ||||||||||||||||||| |||||| ||| |||||||| Sbjct 2001 GACGGTTTCTTCAGAATGATTTTGTTCGCTGTCCGCAATAAAAAGTCAAGCGATATTGTT 2060 Query 2036 GATTTGCTGAAACAGAACAAGGTCCGGTTGTTAAAGAAAGACTTGCCTGTGGAAACTCAT 2095 ||| ||||||||| |||||||||||||||||||||||||| | | ||||||||| ||||| Sbjct 2061 GATCTGCTGAAACGGAACAAGGTCCGGTTGTTAAAGAAAGGCATACCTGTGGAAGCTCAT 2120 Query 2096 TTTGACGAGGTGTTTTGGGCAATCGCAGAGACAGAGCCAACCAAAGTGCAGCTAGGAATG 2155 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct 2121 TTTGACGAGGTGTTTTGGGCAATCGCAGAGACAGAGCCATCCAAAGTGCATCTAGGAATG 2180 Query 2156 GATTTGCTAAGATTTATGAAAGATGAGCTTGGGTTTGTTCCTTCAAGAAAATGTCTAGAT 2215 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2181 GATTTGCTAAGATTTATGAAAGATGAGCTCGGGTTTGTTCCTTCAAGAAAATGTCTAGAT 2240 Query 2216 TTTCTCTTACATGCATGTGTTAATGCCAAGGACCTGGAGCACGGCCTATTGGTGTGGAAA 2275 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2241 TTTCTCTTACATGCATGTGTTAATGCCAAGGACCTGGAGCACGGTCTATTGGTGTGGAAA 2300 Query 2276 GAGTACCAATCTGCAGCACTCCCTTGCAACGTCCTAAGCTTTCTGAGGATGTATCAGGTT 2335 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct 2301 GAGTACCAATCTGCAGCATTCCCTTGCAACGTCCTGAGCTTTCTGAGGATGTATCAGGTT 2360 Query 2336 CTACTAGCTGCAGGGGATTCGGAAGGTGCCAAGGCATTGGTATCAAAAATTCCAAAAGAT 2395 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 2361 CTACTAGCTGCAGGGGATTCAGAAGGTGCCAAGGCATTGGTGTCAAAAATTCCAAAAGAT 2420 Query 2396 GATAAAGATGTACAACATATCATCGAAGAAAGTCAGTCTGCATTTTCTCAAGCACCCAAC 2455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2421 GATAAAGATGTACAACATATCATCGAAGAAAGTCAGTCTGCATTTTCTCAAGCACCCAAC 2480 Query 2456 AAGAAGAAACCAAAAAAGAAAACGATTGTTTCATCAAGAAAGTAGTGATTTTGTACA 2512 |||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||| Sbjct 2481 AAGAAGAAACCAAAAAAGAAAATGATTGTTTTATCAACAAAGTAGTGATTTTGTACA 2537 > AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:11604986-11610651 FORWARD LENGTH=2702 Length=2702 Score = 1081 bits (585), Expect = 0.0 Identities = 1503/1933 (78%), Gaps = 115/1933 (6%) Strand=Plus/Plus Query 535 AAGCAATGATTTAGATTATGCTCTTGGCCACATTGAGAAGGCTTTTGAGCTTTTGAAATC 594 |||||||||| ||| |||||||||| || |||| ||||||| |||| | | | ||| Sbjct 731 AAGCAATGATGCAGAATATGCTCTTGATCAAATTGGGAAGGCTATTGAACATCTCAAAGA 790 Query 595 TATGAGAGATCGCGGATTCT-TGATTGAAGAAAGAGTTTATGGTCCTATTCTT-GGTTAT 652 |||||| | | ||||||| | |||| |||| ||| |||||| ||| || || | || Sbjct 791 AATGAGACAGCTTGGATTCTCT-ATTGGAGAAGGAGCTTATGGCCCTTTTTTTAAG-TAC 848 Query 653 TTAATTGATATGGATATGGTAGAGGAGTTCCAAAGTT-TTAAGGATGTGATTAGGGAGGC 711 ||| |||||||||| ||||||| ||||||||||| || | |||||| | |||| ||||| Sbjct 849 TTAGTTGATATGGAAATGGTAGCGGAGTTCCAAA-TTCTCAAGGATTTTATTAAGGAGG- 906 Query 712 CA-GTCTTG-GTTCGGT-TGAGAGACTTGGT-TACTATGAAATGCTTCTTTGGATCCAAC 767 || ||| || | || | || ||||||| || ||||||||||||||||||||||||||| Sbjct 907 CATGTCCTGAG-TC-TTGTGGGAGACTT-GTCTACTATGAAATGCTTCTTTGGATCCAAG 963 Query 768 TTGGTGATGGAGAGAAGATTGAGGAGCTTTGTGATACAATTGATGGTGATAATAGGG-AA 826 | || | ||||||||| | | ||||| ||| || | || ||||| | ||| | Sbjct 964 TCAACGACGAAGAGAAGATCCACAAACTTTGCAATA-AA--GTTGATGATAGT-GGGCTA 1019 Query 827 AGCTTATCAATCTTACAAGAAAATTATCTGCTTGCACTATG-TAAAAAGGACCA--AACG 883 || ||||||||| |||||||| ||||| || ||||||| || | ||| || || || | Sbjct 1020 AGTTTATCAATCCTACAAGAATATTATTTGGTTGCACTGTGCGAGAAA-GA-CAGTAA-G 1076 Query 884 TACCATCTTGAGAGGCTCTTAGGGATTGTAGACATAACAAAAGT-TCAATCGTCGGAC-C 941 | || || ||| ||| |||| ||||| |||||||||| ||| || || | ||| | Sbjct 1077 GAAAATTTTCAGAAGCTGTTAGAAATTGTCGACATAACAACAGTATC-TTCACCAGACGC 1135 Query 942 TATGGACA-AACATATTT-GAGTACCTTGGGAGGTTTTC-ATTGGATTCTGTTGCGGGGA 998 || || | | ||||||| || |||||| ||| | | ||||| |||||||| || Sbjct 1136 -ATTGA-AGAGCATATTTGGA-TACCTT-GGAAAATCGCTGTTGGAGTCTGTTGCAATGA 1191 Query 999 AGTTCCTTTGGGAGCTAAGAGAAAGT-G-ATGGA-GGAGT-GACGAAC-GTTTCTGAA-C 1052 || | |||||||| |||||||| || | | || ||||| || | || ||||| || | Sbjct 1192 AGCTACTTTGGGAACTAAGAGACTGTCGTAAAGATGGAGTGGA-G-ACAGTTTC-AAATC 1248 Query 1053 TCAT-CTCTATCTATTCTACTTGCACCCCAAATCCGACGGTTGAGGATACCATCTTGAAA 1111 |||| || | |||| | || |||| ||||||| | ||||| |||||| |||| || || Sbjct 1249 TCATATTC-AGCTATGCAACCTGCATCCCAAATTCAACGGTAGAGGATGCCATTTTCAAG 1307 Query 1112 TTTAACAAGATGCATGAAGAACTTGATGTTATGCCTTCATCTACATCGTACGAAAAGCTT 1171 ||||||||| ||||||||||||| ||| | |||||||||||||||| || || || ||| Sbjct 1308 TTTAACAAGTTGCATGAAGAACTAGATATCGTGCCTTCATCTACATCTTATGAGAATCTT 1367 Query 1172 GTTAAG-TATAGCTGTGACTCGAATGAGGTAGTCACTGCTCTTGATATAGTTGAAAAAAT 1230 | | || ||| |||| ||| |||||||| |||||||||||||||||||||||||| || Sbjct 1368 G-TCAGTTATCTTTGTGGCTCAAATGAGGTGGTCACTGCTCTTGATATAGTTGAAAATAT 1426 Query 1231 GGGTGAAGCAGGTCTGATAATATCCGCAGATATCCTACATTCATTGTTACATGCCATTGA 1290 | |||||||||||||| ||||||| ||| | ||||| || ||||||||||| |||||||| Sbjct 1427 GTGTGAAGCAGGTCTGGTAATATCAGCAAACATCCTGCACTCATTGTTACAGGCCATTGA 1486 Query 1291 TGAAG-TTCTTGAGTTTGATTTGGTGCGAAGAATCCATTCAATTATGTGC-ACAAAAAGT 1348 | || ||||||||||| ||||||||| ||||||| ||||||| ||| || || || ||| Sbjct 1487 -GCAGATTCTTGAGTTTAATTTGGTGCAAAGAATCTATTCAATAATGAGCAAC-AAGAGT 1544 Query 1349 GTGAAACCAAATACTGAGAAC-TTCCGGAGCAT-TATACGTTTGTGCACAAGAATCAAAG 1406 ||||| ||||||| |||| || ||| ||| || |||| |||||||| ||||||||||| Sbjct 1545 GTGAAGCCAAATAGTGAG-ACTTTCAGGA-AATCTATAAATTTGTGCATAAGAATCAAAG 1602 Query 1407 ATTTTGAAGGTGCATATA-CTATGCTTGGTAATTTAAAAAACTTCAATTTGGAACCGAAC 1465 |||||||||||||||||| | ||||||||||||||||| || |||||||||| ||||||| Sbjct 1603 ATTTTGAAGGTGCATATAAC-ATGCTTGGTAATTTAAAGAATTTCAATTTGGCACCGAAC 1661 Query 1466 TCTAGCATGTTCAATTGTATATTGGCTGGATATTTTAGGGAGAAAAATGTGAGTAGGGCG 1525 |||||||||| ||||| |||| |||| |||||||| |||||||||| |||| || || Sbjct 1662 TCTAGCATGTACAATTCTATAATGGCAGGATATTTCCGGGAGAAAAAAGTGAACAGTGCC 1721 Query 1526 TTAATGGTCGTCAAGCAAATGAAGGAAGCTGGCGTTAAACCTGATTCCATAACTTTTGGT 1585 |||| |||| ||||| ||||||| ||||||| |||||||||||||| | |||||| | Sbjct 1722 TTAAAGGTCCTCAAGGAAATGAAAGAAGCTGATGTTAAACCTGATTCGGTGACTTTTAGC 1781 Query 1586 TATCTAATAAACAACTGTAAACG-GGAGGACG-CTATTACTAAGTACTACGACGAGATGA 1643 |||||||||||| | ||| || ||||| || ||||| | ||||| || | ||||||| Sbjct 1782 TATCTAATAAACTATTGTGG-CGAGGAGG-CGACTATTGCGAAGTATTATAAGGAGATGA 1839 Query 1644 AGCAAGCAGGAGTTCAAGCTACTAAGCGAA-TTTACATGTCCCT-GATAGATGCATATGC 1701 |||||||||||||| ||| || ||||| | ||||||||||||| | || | |||||||| Sbjct 1840 AGCAAGCAGGAGTTGAAGTTAATAAGC-ACGTTTACATGTCCCTTGTTAAA-GCATATGC 1897 Query 1702 AGCAT-CTGGGA-AGTTTGAGAAGGCGAAACAGGTGCTCGTAGATCCAG-ATGTTCCGGC 1758 | ||| | || | ||||||| ||||| |||||||||||| | || || | | |||||||| Sbjct 1898 ATCATGC-GG-ACAGTTTGAAAAGGCAAAACAGGTGCTCATGGA-CCTGGAAGTTCCGGC 1954 Query 1759 TATAA-ACCAAAATGAACTGAAAAGTGTGCTTATTTCGGCTCTTGCATCACGTGGAAA-A 1816 || | | || ||||| ||||||||||| ||||| || ||||| |||||| |||||| | Sbjct 1955 TA-AGGATCACAATGAGCTGAAAAGTGTACTTATATCTGCTCTGGCATCAAATGGAAATA 2013 Query 1817 TGGGCAGATGCCTTACA-TATATATGAAGAAATGAGGAAAGCT--GAATGCCACGTAGAC 1873 | |||| || ||| | ||| ||||||||||||| |||| || | |||| |||||| Sbjct 2014 TAA-CAGAGGCTTTA-AGTATTTATGAAGAAATGAAGAAA-CTCCGC-TGCCCCGTAGAG 2069 Query 1874 CCGAAATCGAT-TATATCTCTTATAGA-ATACTCTGATTCAAATGGAGAGTTAAGTACGC 1931 || ||| | || | ||||||||||||| | ||||||||||||| | |||| | | ||| Sbjct 2070 CCAAAAGCTATCT-TATCTCTTATAGAGA-ACTCTGATTCAAACGCAGAGCTGGGAACGT 2127 Query 1932 TAGTTCAACTGGCTGATGACCTACAAGATGATACTAG-TT--GGATAGATGGTTTCTTCA 1988 | ||| |||| || |||| || | | |||| ||| || |||||||||||||||||| Sbjct 2128 TGGTTGAACTCACTCATGAGCTGC--G-TGATTCTAAATTTTGGATAGATGGTTTCTTCA 2184 Query 1989 GAATGATCTTGTTCGCTGTCCGCAATAGAAAG-TCTAGCAATATTGTTGATTTGCT-GAA 2046 ||| ||| |||| ||||| ||||| | | || || ||| |||| | |||||| | || Sbjct 2185 AAATTATCGTGTTTGCTGTTCGCAACA-ATAGATCAAGCTCTATTCTGGATTTGTTAGAG 2243 Query 2047 ACAGAACAAGGTCCGGTTGTTAAAGAAAGACTT-GCCTGTGGAA-ACTCATTTTGACGAG 2104 |||| ||| || |||| ||| | ||| | | ||||||| | | ||| || ||| Sbjct 2244 -CAGACCAAAAACCACTTGTCCAAGGATGACGTCGG-TGTGGAATATTGGTTT-GAAGAG 2300 Query 2105 GTGTTTTGGGCAATCGCAGAGACAGAGCCAACCAAAGTGCAGCTAGGAATGGATTTGCTA 2164 |||||| | |||| || || |||||| | | | ||| || |||| |||| ||| | Sbjct 2301 GTGTTTAAGTCAATAGCGGAAACAGAGTCTAGTGATGTGAAGGTAGGGCTGGACTTGGTG 2360 Query 2165 AGATTTATGAAAGATGAGCTTGGGTT-TGTTCCTTCAAGAAAATGTCTAGATTTTCT-CT 2222 || ||||||||||| ||||||| ||| ||| ||||||||||||||||| |||||||| || Sbjct 2361 AGTTTTATGAAAGAAGAGCTTGAGTTATGT-CCTTCAAGAAAATGTCTGGATTTTCTTCT 2419 Query 2223 TACATGCATGTGTTAATGCCAAGGACCTGGAGCA-CGGC-CTATTGGTGTGGAAAGAGTA 2280 |||||| ||||| |||||||| || | || | || | ||| |||| ||| ||||||| Sbjct 2420 -ACATGCTTGTGTCAATGCCAAAGATAAGCAG-AGCG-CTCTACTGGTATGGGAAGAGTA 2476 Query 2281 CCAATCTGCAGCACTCCCTTGCAACGTCCT-AAGCT-TTCTGAGGATGTATCAGGTTCTA 2338 ||||| ||||| ||| |||| ||| ||| | || || || | |||||||||||||||||| Sbjct 2477 CCAATGTGCAGAACTTCCTTACAATGTCATCAA-CTATT-TAAGGATGTATCAGGTTCTA 2534 Query 2339 CTAGCTGCAGGGGATTCGGAAGGTGCCA-AGGCATTGGTATCAAAAATTCCAAAAGATGA 2397 |||||||||| |||||| || |||| | ||||| | |||||||| ||||| || ||||| Sbjct 2535 GTAGCTGCAGGAGATTCGAAAAGTGC-AGAGGCAATAGTATCAAAGATTCCTAATGATGA 2593 Query 2398 TAAAGATGTACAA 2410 ||||||||| ||| Sbjct 2594 TAAAGATGT-CAA 2605 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 124815354184 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5