BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490168
Length=3018
Score E
Sequences producing significant alignments: (Bits) Value
AT4G05190.1 | Symbols: ATK5 | kinesin 5 | chr4:2675101-2680214 ... 3871 0.0
AT4G21270.1 | Symbols: ATK1, KATA, KATAP | kinesin 1 | chr4:113... 2071 0.0
AT4G05200.1 | Symbols: CRK25 | cysteine-rich RLK (RECEPTOR-like... 368 2e-100
> AT4G05190.1 | Symbols: ATK5 | kinesin 5 | chr4:2675101-2680214
FORWARD LENGTH=3132
Length=3132
Score = 3871 bits (2096), Expect = 0.0
Identities = 2429/2589 (94%), Gaps = 25/2589 (1%)
Strand=Plus/Plus
Query 127 TTGACGAGCATAAGGTGAAGAAATCCATCGAAGATGCCGCTTCGCAACCAGAATCGCGCT 186
||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 205 TTGACGAGCCTAAGGTGAAGCAATCCATCGAAGATGCCACTTCGCAACCAGAATCGCGCT 264
Query 187 CCTTTGCCTAGTCCAAACGTCAAAAAGGAAGCTCTTTCAAG-A------AGGA-AAGC-- 236
||||| |||||||||||||||||||||||||| || ||||| | || ||||
Sbjct 265 CCTTTACCTAGTCCAAACGTCAAAAAGGAAGCGCTCTCAAGTATTCCTTTTGACAAGCGA 324
Query 237 -GG-A--A-ACGCAAGTTACCGGAAGAAGACAAGTGTTTTCGACAGTGAACAGACAAGAT 291
|| | | ||||||| ||| ||||||||||||||| |||||||||||||||||| | |
Sbjct 325 AGGAAGGAGACGCAAGGTACTGGAAGAAGACAAGTGCTTTCGACAGTGAACAGAC-A-A- 381
Query 292 GTTACTGCGAACAGCGATGTGGGCAGTACAGAGGAGTGTGGTAAAGTTGAATTTACAAAA 351
| | |||||||||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct 382 G--A-TGCGAACAGCGATGTGGGAAGCACAGAGGAGTGTGGTAAAGTTGAGTTTACAAAA 438
Query 352 GATGAAGTCTTGGCTTTGCTTAACGAGAGAGCTAAAGCTGGAAAATTTGATACCAAGGGT 411
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 GATGAAGTGTTGGCTTTGCTTAACGAGAGAGCTAAAGCTGGAAAATTTGATACCAAGGGT 498
Query 412 AAGATTGAGCAAATGACGGATATTATCAAGAAGCTTAAGGTTTGTGTTAGATGGTTCCAA 471
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 499 AAGATTGAGCAAATGACGGATATTATCAAGAAGCTTAAGGTCTGTGTTAGATGGTACCAA 558
Query 472 CAAGTGGACGAAACTCATGTTCAGGAGAAGGAAAATCTTTGTTCTTCTCTTCAATCTGCA 531
|||||||| |||||||||||||| || ||||||||||||| |||||||||||||||||||
Sbjct 559 CAAGTGGATGAAACTCATGTTCAAGACAAGGAAAATCTTTCTTCTTCTCTTCAATCTGCA 618
Query 532 GAGAAAAGATACTGTGATAAAGAGTTGGATGCGAAGACCAACGAGGAAGTGCTACAAGCA 591
|||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||| ||||
Sbjct 619 GAGAAAAGATACAGTGATAAAGAGTTGGATGCAAAGACCAAAGAGGAAGAGCTACGAGCA 678
Query 592 ACTATAGCAGAGATGAAGGAGAAAATAGCATCACTTCAGGAAAAGTTGTCCAAGGAGGAG 651
|||||| |||||||||||||||| |||| |||||||||||||||| ||||||||||| ||
Sbjct 679 ACTATAACAGAGATGAAGGAGAACATAGAATCACTTCAGGAAAAGCTGTCCAAGGAGAAG 738
Query 652 TTGAGTAAATTGGAAGCAATTGAAAATTACAGAAGAGAAAAAGAATGTAGAGATGCAGCT 711
||||||||| |||| |||||||||||| |||||||||||||||| ||||||| || ||||
Sbjct 739 TTGAGTAAACTGGATGCAATTGAAAATCACAGAAGAGAAAAAGATTGTAGAGTTGTAGCT 798
Query 712 GAGAAGCTTCAAGTTTCTCTAC-GAGATGAGCTTGACAAAGTTACAGAAGAGAAAATGGC 770
||||||||||| |||||||| | |||| |||||||||||||||| ||| || ||||||||
Sbjct 799 GAGAAGCTTCAGGTTTCTCT-CAGAGAAGAGCTTGACAAAGTTAAAGAGGAAAAAATGGC 857
Query 771 TGCGAAACAGAAGGTGATGTCCCTTGAAGATATGTACAAAAGGCTGCAAGAGTACAACAC 830
|||||| |||||||||| ||| || |||||||||||||| ||||||||||||||||||||
Sbjct 858 TGCGAAGCAGAAGGTGACGTCTCTAGAAGATATGTACAAGAGGCTGCAAGAGTACAACAC 917
Query 831 AAGTCTGCAACAATATAACACAAAACTCCAGACTGATCTTGAAGCAGTTCGAGAGGCGCA 890
|||| |||||||||||||||| |||||||||||||||||||||| || | ||||||| ||
Sbjct 918 AAGTTTGCAACAATATAACACCAAACTCCAGACTGATCTTGAAGTAGCTAGAGAGGCTCA 977
Query 891 TACTCGTGCTGAAAAGGAAAAGTCAAGTATACTGGAGAATCTTACTACCCTAAGAGGTCA 950
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 978 CACTCGTGCTGAAAAAGAAAAGTCAAGTATACTGGAGAATCTTACTACACTAAGAGGTCA 1037
Query 951 CAGTAAATCACTACAAGATCAATTAGCATTGAGCCGGGTTTCACAAGATGAAGCGGTAAA 1010
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1038 CAGTAAATCACTACAAGATCAATTAGCATCGAGCCGGGTTTCACAAGATGAAGCGGTAAA 1097
Query 1011 ACAAAAGGAGTCATTGTTGATGGAAGTCAACAACCTTCGGAGTGAGCTCCAACAAGTCCG 1070
||||||||| |||||| |||||||||| || ||||||| || ||||| |||||||||||
Sbjct 1098 ACAAAAGGATTCATTGCTGATGGAAGTTAATAACCTTCAAAGCGAGCTGCAACAAGTCCG 1157
Query 1071 TGATGATCGTGATCGCCAGGTTGTACAGTCGCAAAAGCTGGCTGATGAGATACTGATGTA 1130
|||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1158 TGATGATCGTGATCGCCATGTTGTACAGTCACAAAAGCTGGCTGGTGAGATACTGATGTA 1217
Query 1131 TAAGGAGAGTGTTGGAAAGTCATCTCATGAGTTGGACATTCTGATTGCAAAATCAGGATC 1190
|||||||||||||||||||||||||||||||||||||||||| || || |||||||||||
Sbjct 1218 TAAGGAGAGTGTTGGAAAGTCATCTCATGAGTTGGACATTCTTATAGCCAAATCAGGATC 1277
Query 1191 TTTGGAGGAAACATGTTCGTTACAAAAGGAGCGTATAAAAATGTTGGAGCAGGAATTAGC 1250
||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct 1278 TTTAGAGGAAACATGTTCGTTGCAAAAAGAGCGTATTAAAATGTTGGAGCAGGAATTAGC 1337
Query 1251 TTTTGCTAAGGAAAAGCTTAAGATGGTAGATGCATCTATGTCTCATACTATGACAGAGTT 1310
||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| ||
Sbjct 1338 TTTTGCTAAGGAAAAGCTTAAGATGGTGGATTTATCTATGTCTCATACAATGACAGAATT 1397
Query 1311 TGAGGAGCAGAAACAACACGTGCATGAACTGCAAGATCGCCTTGCAGATACGGAGCGTCA 1370
|||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 1398 TGAGGAGCAGAAACAATGTATGCATGAACTGCAAGATCGCCTTGCAGACACGGAGCGTCA 1457
Query 1371 ACTTTATGAAGGAGAGTTGTTACGGAAGAAGCTTCATAACACCATTCTTGAACTCAAAGG 1430
||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||||
Sbjct 1458 ACTTTTTGAAGGAGAGTTATTAAGGAAAAAGCTTCATAACACCATTCTTGAACTCAAAGG 1517
Query 1431 AAACATACGCGTGTTCTGCCGAGTGCGCCCATTGCTACCAGATGATGGAGGACGCCAAGA 1490
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1518 AAACATACGCGTGTTCTGCCGAGTGCGCCCCTTGCTACCAGATGATGGAGGACGCCAAGA 1577
Query 1491 GGCCAGCGTTATTGCCTATCCCACATCAACTGAATCTCTTGGTAGAGGCATTGATGTTGT 1550
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 1578 GGCCAGTGTTATTGCCTATCCTACATCAACTGAATCTCTTGGTAGAGGCATTGATGTGGT 1637
Query 1551 CCAAAGTGGTAACAAGCATCCTTTCACCTTCGACAAGGTCTTCGACCATGGAGCTTCTCA 1610
||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1638 CCAAAGTGGTAACAAACATCCTTTCACTTTCGACAAGGTCTTCGACCACGGAGCTTCTCA 1697
Query 1611 GGAGGAAGTATTCTTTGAAATATCTCAACTTGTGCAGAGCGCATTAGATGGCTACAAGGT 1670
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1698 GGAGGAAGTATTCTTTGAAATATCTCAACTTGTGCAGAGCGCATTGGATGGCTACAAGGT 1757
Query 1671 TTGTATTTTTGCCTACGGTCAGACAGGTTCTGGCAAAACCTACACAATGATGGGCAGGCC 1730
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1758 TTGTATTTTTGCCTACGGTCAGACAGGTTCTGGCAAAACCTATACCATGATGGGCAGGCC 1817
Query 1731 TGAAACACCAGAACAGAAAGGACTGATCCCTCGATCACTTGAACAAATATTCAAAACCAG 1790
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1818 TGAAACACCAGAACAGAAAGGACTGATCCCTCGATCACTCGAACAAATATTCAAAACCAG 1877
Query 1791 CCAAAGTCTTAGTACACAAGGCTGGAAATACAAGATGCAGGTATCCATGTTGGAGATATA 1850
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1878 CCAAAGTCTTAGTACACAAGGCTGGAAATACAAGATGCAGGTCTCAATGTTGGAGATATA 1937
Query 1851 TAACGAGTCCATCAGGGATTTGTTGTCTACAAACCGAACAATTGCTATAGAATCTGTGCG 1910
||| ||||||||||| || ||||||||||||| |||||| ||||||||||||||||||||
Sbjct 1938 TAATGAGTCCATCAGAGACTTGTTGTCTACAAGCCGAACGATTGCTATAGAATCTGTGCG 1997
Query 1911 AGCAGACAGTAGCACCTCTGGAAGACAATATACAATCACACATGATGTTAATGGAAACAC 1970
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1998 GGCAGACAGTAGCACATCTGGAAGACAATATACAATCACACATGATGTTAATGGAAACAC 2057
Query 1971 TCATGTTAGTGACCTGACAATAGTAGATGTATGCAGCATTGGACAAATTTCCTCA-TTAT 2029
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 2058 TCATGTTAGCGACCTGACAATAGTAGATGTATGCAGCATTGGACAAATTTCCTCACTT-T 2116
Query 2030 TGCAACAGGCTGCTCAGAGCAGGTCTGTTGGTAAGACCCATATGAATGAACAATCATCAA 2089
||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 2117 TGCAACAAGCTGCTCAGAGCAGGTCTGTTGGGAAGACGCATATGAATGAACAATCATCAA 2176
Query 2090 GAAGTCATTTTGTGTTTACTCTTAGGATTTCTGGTGTGAATGAGAGCACTGAACAGCAGG 2149
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2177 GAAGTCATTTCGTGTTTACTCTTAGGATTTCTGGTGTGAATGAGAGCACTGAACAGCAAG 2236
Query 2150 TACAAGGTGTTCTTAACCTAATTGATCTTGCTGGAAGTGAGCGACTTTCAAGAAGCGGGG 2209
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2237 TACAAGGTGTTCTTAACCTAATTGATCTTGCTGGAAGTGAGCGACTTTCAAGGAGCGGGG 2296
Query 2210 CAACCGGAGACCGATTAAAGGAGACACAGGCTATAAACAAAAGTTTGTCTGCTTTGAGTG 2269
||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 2297 CAACCGGAGACCGGTTAAAGGAGACACAGGCTATAAACAAAAGCTTGTCTGCATTGAGTG 2356
Query 2270 ATGTTATATTTGCATTGGCAAAGAAAGAGGATCATGTACCTTTCAGAAACTCAAAGTTAA 2329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2357 ATGTTATATTTGCATTGGCAAAGAAAGAGGATCATGTACCTTTCAGAAACTCAAAGTTAA 2416
Query 2330 CATATCTGCTCCAGCCATGTTTAGGAGGTGACTCAAAGACCTTAATGTTTGTTAACATAT 2389
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 2417 CATATCTGCTCCAGCCATGTTTAGGAGGGGACTCAAAGACCTTAATGTTTGTGAACATAT 2476
Query 2390 CACCTGATCCATCTTCAACTGGAGAGTCTCTTTGCTCACTCCGGTTTGCTGCTAGAGTGA 2449
||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| |
Sbjct 2477 CACCTGATCCATCTTCAACTGGAGAGTCTCTATGCTCTCTTCGGTTTGCTGCTAGAGTTA 2536
Query 2450 ATGCATGTGAGATTGGAATACCTCGCAGACAAACTTCCGCAAAACTCCTCGACTCTCGCC 2509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2537 ATGCATGTGAGATTGGAATACCTCGCAGACAAACTTCCGCAAAACTCCTCGACTCTCGCC 2596
Query 2510 TAAGTTACGGTTAAAACTGGTGGTTCGAGTCCCTCTTTCATCTGTATAACAACAACAACA 2569
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2597 TAAGTTACGGTTAACACTGGTGGTTCGAGTCTCTCTTTCATCTGTATAACAACAACAACA 2656
Query 2570 ATTGTTTTAGAGGTACAAGTTACAACATAACATTAGTGGAACTAATTGGGGAAGTCAACG 2629
||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 2657 TTTGTTTTAGAGTTACAAGTTACAACATAACATTACTGGAACTAATTGTTGAAGTCAACG 2716
Query 2630 AGGATGAACAATAGTGATGGAAGAATCGTCAACAGACAAAGGCAAAGACTTGCTTGTTGC 2689
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2717 AGGATAAACTATAGTGATGGAAGAATCGTCAACAGACAAAGGCAAAGACTTGCTTGTTGC 2776
Query 2690 AGATTGATC 2698
||| |||||
Sbjct 2777 AGAGTGATC 2785
Score = 455 bits (246), Expect = 1e-126
Identities = 300/326 (92%), Gaps = 4/326 (1%)
Strand=Plus/Plus
Query 2695 GATCTTTAGAATCTCTCATGTTTTGAAGAAGAAACCCAGATCGCTTTGGAATTGGTAAAG 2754
||||| |||| ||| ||||| || |||||||||||||||||||||||||||| |||||||
Sbjct 2809 GATCTCTAGAGTCTTTCATGGTTCGAAGAAGAAACCCAGATCGCTTTGGAATCGGTAAAG 2868
Query 2755 TAACAGTGAAGCTGTTCATCATCACAAGAATGTTATCCATTGAAGGTCTCTCTGAAGAAT 2814
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2869 TAACAGTGAAGCTGTTCATCATCACAAGAATGTCATCCATTGAAGGTCTCTCTGAAGAAT 2928
Query 2815 CATCTTGAACACATAACAGTGCAATGTGAATGCATCTGATCACTTCATTTGTCTGAAAAT 2874
| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2929 CTTCTTGAACACATAACAAAGCAATGTGAATGCATCTGATCACTTCATTTGTCTGAAAAT 2988
Query 2875 TCCCTCTCATTGTTTCATCTACTAGCTCCAATGGGGAATTCTCTACCCATAGCTTCCACA 2934
|||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct 2989 TCCCTCTCATTGCTTCATCTACTAGCTCCAGTGGTGAATTCTCCACCCATAGCTTCCACA 3048
Query 2935 CCTGCAAATTTTTAGAATGTTTCTGAAAACAGTACTTAAAAAATAAGTTTTTGAATGGTT 2994
|||||| || |||| |||||||| |||||||||| ||||||| | |||||||| |||||
Sbjct 3049 CCTGCAGATATTTATAATGTTTCAGAAAACAGTATTTAAAAAG-A-GTTTTTGATTGGTT 3106
Query 2995 ATAAAT-A-TACTTACGTAGGTCACT 3018
||||| | |||||||||||||||||
Sbjct 3107 ATAAAACAGTACTTACGTAGGTCACT 3132
Score = 93.5 bits (50), Expect = 1e-17
Identities = 57/60 (95%), Gaps = 1/60 (2%)
Strand=Plus/Plus
Query 1 AAGAGTCCGCCGATCTGTTTTCAAATATTCAAATAACAGGCTCCTCCTCCT-CCTTCCTC 59
||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct 1 AAGAGTCCGCCGATCTGTTTTCAAATATTCAAACAACAGGCTCCTCCTTCTTCCTTCCTC 60
> AT4G21270.1 | Symbols: ATK1, KATA, KATAP | kinesin 1 | chr4:11329363-11334135
REVERSE LENGTH=2849
Length=2849
Score = 2071 bits (1121), Expect = 0.0
Identities = 1946/2339 (83%), Gaps = 77/2339 (3%)
Strand=Plus/Plus
Query 227 GAAGGAAAGCGGAAACGC-A--AGTTACCGGAAGAAGACAAG-TGTTTTCGACAGTGAAC 282
||||||||| |||||||| | || ||| || |||||||||| | |||||| | |||||
Sbjct 334 GAAGGAAAGTGGAAACGCAAGGAGGTACTGGGAGAAGACAAGCT-TTTTCGGCTGTGAAT 392
Query 283 AGACAAGATGTTACTG-CGAACAGCGATGT-GGGCAGTACAGAGGAGTGTGGTAAAGTTG 340
| ||||||||| || | |||||||||||| ||| || | || || |||||||||||||
Sbjct 393 AAACAAGATGTCAC-GATGAACAGCGATGTAGGG-AGCATTGAAGAATGTGGTAAAGTTG 450
Query 341 AATTTACAAAAGATGAAGTCTTGGCTTTGCTTAACGAGAGAGCTAAAGCTGGAAAATTTG 400
| ||||||||||||||| | ||||| ||||| | |||||||| ||||||||||| ||||
Sbjct 451 ACTTTACAAAAGATGAAATATTGGCGTTGCTCAGTGAGAGAGCAAAAGCTGGAAAGTTTG 510
Query 401 ATACCAAGGGTAAGATTGAGCAAATGACGGATATTATCAAGAAGCTTAAGGTTTGTGTTA 460
|||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||||| |
Sbjct 511 ATACTAAGGCTAAGATTGAGCAAATGACGGATATTATCAAGAGGCTGAAGGTTTGTGTAA 570
Query 461 GATGGTTCCAACAAG-TGGACGAAACTCATGTTCAGGAGAAGGAAAATCTT--TGTTCTT 517
|||||||||||||| | || ||||| ||||| || |||||||||||| || | | ||
Sbjct 571 AATGGTTCCAACAAGCT-GATGAAACCCATGTCCAAGAGAAGGAAAAT-TTGAAGGT-TT 627
Query 518 CTCTT-CAATCTGCAG-AGAAAAGATACTGTGATAAAGAGTTGGATGCGAAGACCAACGA 575
|| || ||||| ||| | |||| |||| | ||||||||||| || | ||| || ||
Sbjct 628 CT-TTGGAATCTTCAGAACAAAA-ATACAACCACAAAGAGTTGGAGGCTAGGACAAAAGA 685
Query 576 GGAAGTGCTACAAGCAACTATAGCAGAGAT-GAAGGAGAAAATAGCATCACTTCAGGAAA 634
||||| |||||| || ||||| || || | ||| ||||| ||| ||||| || ||||
Sbjct 686 GGAAGAGCTACAGGCCACTATCTCAAAGTTGGAA-GAGAATGTAGTGTCACTACATGAAA 744
Query 635 AG-TTGTCCAAGGAGGAGT-TGAGTAAATTGGAAGCAATTGAAAATTACAGAAGAGAAAA 692
|| ||| | |||||||||| | |||| | ||| || |||||| | | |||||||||||
Sbjct 745 AGCTTG-CAAAGGAGGAGTCT-AGTACACAGGACGCCATTGAATGTCATAGAAGAGAAAA 802
Query 693 AGAATG-TAGAGATGCAGCTG-AGAAGCTTCAAGTTTCTCTAC-GAGATGAGCTTGACAA 749
|||| | ||||| |||||||| | ||| | || | |||||| | |||| || ||||| ||
Sbjct 803 AGAA-GCTAGAGTTGCAGCTGAAAAAG-TGCAGGCTTCTCT-CGGAGAAGAACTTGATAA 859
Query 750 AGTTACA-GAAGAGAAAATGGCTGCGAAACAGAAGGTGATGTCCCTTGAAGATATGTACA 808
||||| | ||||||||||||||||| || |||||||||| ||| ||||| ||||||||||
Sbjct 860 AGTTA-AGGAAGAGAAAATGGCTGCCAAGCAGAAGGTGACGTCACTTGAGGATATGTACA 918
Query 809 AAAGGCTGCAAGAGTACAACACAAGTCTGCAACAATATAACA-CAAAACTCCAGACTGAT 867
|||||||||||||||||||||||||| ||||||||||||||| | ||||| |||||||||
Sbjct 919 AAAGGCTGCAAGAGTACAACACAAGTTTGCAACAATATAACAGC-AAACTTCAGACTGAT 977
Query 868 CTTGAAGCAGTTCGAGAGGCGCAT-ACTCGTGCTGAAAAGGAAAAGTCAAGTATACTGGA 926
|||||| ||||||||| || | | || ||||||||||| || |||||||| || |||||
Sbjct 978 CTTGAAACAGTTCGAGCTGCAC-TCACACGTGCTGAAAAAGAGAAGTCAAGCATCCTGGA 1036
Query 927 GAATCTTACTACCCTAAGAGGTCACAGTAAATCACTACAAGATCAATTAGCATT-GAGCC 985
|||||||| ||| || || || ||||| || || || || |||||| || | || |||
Sbjct 1037 GAATCTTAGTACACTTAGGGGACACAGCAAGTCGCTGCAGGATCAACTATC-TTCAAGCA 1095
Query 986 GGGT-TTCACAAGATGAAGCGGTAAAACAAAAGGAGTCATTG-TTGAT-GGAAGTCAAC- 1041
| || || |||||||| || ||||||| ||||| |||||| || | |||||| ||
Sbjct 1096 GAGTGTT-GCAAGATGACGCTATAAAACAGAAGGATTCATTGCTT--TCGGAAGT-TACT 1151
Query 1042 AACCTTCGGAGTGAGCTCCAACAAGTCCGTGATGATCGTGATCGCCAGGTTGTACAGTCG 1101
|| ||||||| |||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct 1152 AATCTTCGGAATGAGCTCCAACAAGTCCGGGATGACCGTGATCGCCAAGTTGTACAGTCA 1211
Query 1102 CAAAAGCTGGCTGATGAGATAC-TGATGTATAAGGAGAGTGTTGGAAAGTCATCTCATGA 1160
|| |||||| |||| ||||| | || ||| |||||| ||| ||||||||||| || ||
Sbjct 1212 CAGAAGCTGTCTGAGGAGAT-CAGGAAGTACCAGGAGAATGTCGGAAAGTCATCGCAAGA 1270
Query 1161 GTTGGACATTC-TGATTGCAAAATCAGGATCTTTGGAGGAAACATGTTCGTTACAAAAGG 1219
| | |||| || ||| |||||||||||||| |||||||| ||||||||||| || ||||
Sbjct 1271 GCTAGACA-TCTTGACAGCAAAATCAGGATCGTTGGAGGAGACATGTTCGTTGCAGAAGG 1329
Query 1220 AGCGTATAAAAATGTTGGAGCAGGAATTAGCTTTTGCTAAGGAAAAGCTTAAGATGGTAG 1279
||||| |||| ||||| |||||| ||||||| | || || |||| || ||||||| ||
Sbjct 1330 AGCGTTTAAATATGTTAGAGCAGCAATTAGCAATCGCCAATGAAAGGCAAAAGATGGCAG 1389
Query 1280 ATGCATCTA-TGTCTCATACTATGACAGAGTTTGAGGAGCAGAAACAAC-AC-GTGCATG 1336
||||||| | | |||| ||||| ||||||||||||||||||||| || | || |||| |
Sbjct 1390 ATGCATC-AGTATCTCTTACTAGGACAGAGTTTGAGGAGCAGAAGCATCTACTGTGC--G 1446
Query 1337 AACTGCAAGATCGCCTTGCAGATACGGAGCGTCAACTTTATGAAGGAGAGTTGTTACGGA 1396
|||| ||||| || |||||||| | ||||| |||||| | ||| |||||||| || ||||
Sbjct 1447 AACTACAAGACCGGCTTGCAGACATGGAGCATCAACTGTGTGAGGGAGAGTTATTGCGGA 1506
Query 1397 AGAAGCTTCATAACACCATTCTTGAACTCAAAGGAAACATACGCGTGTTCTGCCGAGTGC 1456
|||||||||||||||| ||||||||| | |||||||| ||||| || |||||||||||||
Sbjct 1507 AGAAGCTTCATAACACTATTCTTGAATTAAAAGGAAATATACGTGTCTTCTGCCGAGTGC 1566
Query 1457 G-CCCATTGCTACCAGATGATGGAGGACGCCAAGAGGCCAGC-GTTATTGCCTATCCCAC 1514
| ||| ||| ||||||| ||||||||||| || || | || | || || |||||||| ||
Sbjct 1567 GTCCC-TTGTTACCAGACGATGGAGGACGACATGAAG-CAACTGTAATAGCCTATCCTAC 1624
Query 1515 ATCAACTGAATCTCTTGGTAGAGGCATTGATGTT-GTCCAAAGTGGTAACAAGCATCCTT 1573
||||| ||| | | || ||||| ||||| || || || ||||| ||||| |||||||
Sbjct 1625 TTCAACAGAAGCCCAAGGAAGAGGTGTTGAT-TTGGTTCAGAGTGGGAACAAACATCCTT 1683
Query 1574 TCACCTTCGACAAGGTCTTCGACCATGGAGCTTCTCAGGAGGAAGTATTCTTTGAAATAT 1633
||||||| ||||| || ||| |||| | |||||| |||||||||||||||||||||||||
Sbjct 1684 TCACCTTTGACAAAGTTTTCAACCACGAAGCTTCCCAGGAGGAAGTATTCTTTGAAATAT 1743
Query 1634 CTCAACTTGTGCAGAGCGCATTAGATGGCTACAAGGTTTGTATTTTTGCCTACGGTCAGA 1693
|||||||||| ||||| ||||| |||||||| ||||||||||| ||||||||||||||||
Sbjct 1744 CTCAACTTGTACAGAGTGCATTGGATGGCTATAAGGTTTGTATCTTTGCCTACGGTCAGA 1803
Query 1694 CAGGTTCTGGCAAA-ACCTACACAATGATGGGCAGGCCTGAAACACCAGAACAGAAAGGA 1752
| |||||||| ||| |||||||| ||||||||| ||||||| | ||||| |||||||||
Sbjct 1804 CCGGTTCTGG-AAAGACCTACACCATGATGGGCCGGCCTGAGGCGCCAGATCAGAAAGGA 1862
Query 1753 CTGATCCCTCGATCACTTGAACAAATATTCAAAACCAGCCAAAGTCTTAGTACACAAGGC 1812
||||||||||||||||||||||| |||||| || |||| ||| || || ||||||||
Sbjct 1863 CTGATCCCTCGATCACTTGAACAGATATTCCAAGCCAGTCAATCACTCGGTGCACAAGGC 1922
Query 1813 TGGAAATACAAGATGCAGGTATCCATGTTGGAGATATATAACGAGTCCATCAGGGATTTG 1872
||||| ||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||
Sbjct 1923 TGGAAGTACAAGATGCAGGTATCGATGTTGGAGATATATAATGAGACCATCAGAGATTTG 1982
Query 1873 TTGTCTACAAACCGAACAA-TTGCTATAGAATCT-GTGCGAGCAGACAGTAGCACCTCTG 1930
| |||||||| ||||||| || |||| || | | ||||||||||||||| ||||||| |
Sbjct 1983 CTCTCTACAAATCGAACAACTT-CTATGGACT-TGGTGCGAGCAGACAGTGGCACCTCAG 2040
Query 1931 G-AAGACAATATACAATCACACATGATGTTAATGGAAACACTCATGTTAGTGACCTGACA 1989
| ||| |||||||||||||| ||||| || |||||| |||| ||||| || ||| ||||
Sbjct 2041 GAAAG-CAATATACAATCACTCATGACGTAAATGGACACACCCATGTCAGCGACTTGACC 2099
Query 1990 ATAGTAGATGTATGCAGCATTGGACAA-ATTTCCTCATTATTGCAACAGGCTGCTCAGAG 2048
||| | ||||| |||||| ||||| || || |||||| | ||||| ||||||||||||||
Sbjct 2100 ATATTTGATGTGTGCAGCGTTGGA-AAGATATCCTCACTCTTGCAGCAGGCTGCTCAGAG 2158
Query 2049 CAGGTCTGTTGGTAAGACCCATATGAATGAACAATCATCAAGAAGTCATTTTGTGTTTAC 2108
|||||| || || ||||| || |||||||| |||||||| ||||||||||| ||||||||
Sbjct 2159 CAGGTCAGTAGGGAAGACTCAAATGAATGAGCAATCATCTAGAAGTCATTTCGTGTTTAC 2218
Query 2109 TCTTAGGATTTCTGGTGTGAATGAGAGCACTGAACAGCAGGTACAAGGTGTTCTTAACCT 2168
| | |||||||| ||||| ||||||||||| ||||||||||||||||||||||| |||||
Sbjct 2219 TATGAGGATTTCAGGTGTTAATGAGAGCACCGAACAGCAGGTACAAGGTGTTCTCAACCT 2278
Query 2169 AATTGATCTTGCTGGAAGTGAGCGACTTTC-AAGAAGCGGGGCAACCGGAGACCGATTAA 2227
||| |||||||||||||| ||| | || || ||| || |||||||| ||||| |||||||
Sbjct 2279 AATAGATCTTGCTGGAAGCGAGAGGCTATCGAAG-AGTGGGGCAACTGGAGATCGATTAA 2337
Query 2228 AGGAGACACAGGCTATAAACAAAAGTTTGTCTGCTTTGAGTGATGTTATATTTGCATTGG 2287
| |||||||||||||||||||||||||| || |||||||||||||| |||||||||||||
Sbjct 2338 AAGAGACACAGGCTATAAACAAAAGTTTATCAGCTTTGAGTGATGTAATATTTGCATTGG 2397
Query 2288 CAAAGAAAGAGGATCATGTACCTTTCAGAAACTCAAAGTTAACATATCTGCTCCAGCCAT 2347
| |||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| |
Sbjct 2398 CTAAGAAAGAAGATCATGTTCCTTTCAGAAACTCAAAGCTAACATATCTGCTCCAGCCTT 2457
Query 2348 GTTTAGGAGGTGACTCAAAGACCTTAATGTTTGTTAACATATCACCTGATCCATCTTCAA 2407
| ||||||| || ||||||||||| ||||| || ||||| || ||||| ||| ||||
Sbjct 2458 GCCTAGGAGGAGATTCAAAGACCTTGATGTTCGTAAACATTTCGCCTGACCCAACTTCTG 2517
Query 2408 CTGGAGAGTCTCTTTGCTCACTCCGGTTTGCTGCTAGAGTGAATGCATGTGAGATTGGAA 2467
|||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |
Sbjct 2518 CTGGAGAGTCTCTTTGCTCACTCCGGTTTGCTGCTAGAGTAAATGCGTGTGAAATTGGTA 2577
Query 2468 TACCTCG-CAGACAAACTTCCGCAAAACTCCTCGACTCTCGCCTAAGTTACGGTTAAAA 2525
||||| | | |||||||||| | || ||||| ||||||||| |||| || || |||||
Sbjct 2578 TACCTAGGC-GACAAACTTCAACGAAGCTCCTTGACTCTCGCTTAAGCTATGGCTAAAA 2635
> AT4G05200.1 | Symbols: CRK25 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 25 | chr4:2679723-2682309 REVERSE LENGTH=2098
Length=2098
Score = 368 bits (199), Expect = 2e-100
Identities = 227/241 (94%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 2695 GATCTTTAGAATCTCTCATGTTTTGAAGAAGAAACCCAGATCGCTTTGGAATTGGTAAAG 2754
||||| |||| ||| ||||| || |||||||||||||||||||||||||||| |||||||
Sbjct 1930 GATCTCTAGAGTCTTTCATGGTTCGAAGAAGAAACCCAGATCGCTTTGGAATCGGTAAAG 1871
Query 2755 TAACAGTGAAGCTGTTCATCATCACAAGAATGTTATCCATTGAAGGTCTCTCTGAAGAAT 2814
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1870 TAACAGTGAAGCTGTTCATCATCACAAGAATGTCATCCATTGAAGGTCTCTCTGAAGAAT 1811
Query 2815 CATCTTGAACACATAACAGTGCAATGTGAATGCATCTGATCACTTCATTTGTCTGAAAAT 2874
| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1810 CTTCTTGAACACATAACAAAGCAATGTGAATGCATCTGATCACTTCATTTGTCTGAAAAT 1751
Query 2875 TCCCTCTCATTGTTTCATCTACTAGCTCCAATGGGGAATTCTCTACCCATAGCTTCCACA 2934
|||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct 1750 TCCCTCTCATTGCTTCATCTACTAGCTCCAGTGGTGAATTCTCCACCCATAGCTTCCACA 1691
Query 2935 C 2935
|
Sbjct 1690 C 1690
Score = 182 bits (98), Expect = 2e-44
Identities = 110/116 (95%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 2583 TACAAGTTACAACATAACATTAGTGGAACTAATTGGGGAAGTCAACGAGGATGAACAATA 2642
|||||||||||||||||||||| |||||||||||| ||||||||||||||| ||| |||
Sbjct 2069 TACAAGTTACAACATAACATTACTGGAACTAATTGTTGAAGTCAACGAGGATAAACTATA 2010
Query 2643 GTGATGGAAGAATCGTCAACAGACAAAGGCAAAGACTTGCTTGTTGCAGATTGATC 2698
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2009 GTGATGGAAGAATCGTCAACAGACAAAGGCAAAGACTTGCTTGTTGCAGAGTGATC 1954
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 150049326513
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5