BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490208
Length=2667
Score E
Sequences producing significant alignments: (Bits) Value
AT3G32340.1 | Symbols: | transposable element gene | chr3:1327... 4078 0.0
AT3G33011.1 | Symbols: | transposable element gene | chr3:1356... 2780 0.0
AT4G03810.1 | Symbols: | transposable element gene | chr4:1751... 2665 0.0
AT3G42471.1 | Symbols: | transposable element gene | chr3:1461... 2562 0.0
AT4G07840.1 | Symbols: | transposable element gene | chr4:4652... 2553 0.0
AT3G30747.1 | Symbols: | transposable element gene | chr3:1239... 1947 0.0
AT3G32305.1 | Symbols: | transposable element gene | chr3:1325... 1751 0.0
AT3G42182.1 | Symbols: | transposable element gene | chr3:1435... 1297 0.0
AT4G08094.1 | Symbols: | transposable element gene | chr4:4993... 1275 0.0
AT4G07862.1 | Symbols: | transposable element gene | chr4:4688... 942 0.0
AT4G02317.1 | Symbols: | transposable element gene | chr4:1021... 324 3e-87
> AT3G32340.1 | Symbols: | transposable element gene | chr3:13278562-13281228
REVERSE LENGTH=2667
Length=2667
Score = 4078 bits (2208), Expect = 0.0
Identities = 2520/2673 (94%), Gaps = 12/2673 (0%)
Strand=Plus/Minus
Query 1 CATCTTTATAAATCTAATGCCAATCGCAGCAGTATGACTCTCATGCTTAGGCTGTGGAAG 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 2667 CATCTTTATAAATCTAATGCCAATCGCAGCAGTATGACTCTCATGCTTCGGCTGCGGAAG 2608
Query 61 AGGTTTAGTAA-ACGGATCAGCAACATTTGCATCTGTTGGAACTCTGCTAATCTTCACAT 119
||||||||||| | |||||||||||||||||||| |||| |||||| ||| |||||||||
Sbjct 2607 AGGTTTAGTAAGA-GGATCAGCAACATTTGCATCCGTTGAAACTCTTCTAGTCTTCACAT 2549
Query 120 CACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCT 179
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2548 CACCTCTATCAATAATCTCACGAATGAGGTAATATCGCCTTTGTATGTGTTTGGATTTCT 2489
Query 180 GGTGTGATCTAGGTTCTTTCGCTTGAGCGATGGCTCCATTGTTATCACAGTAAAGATCGA 239
||||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||| |
Sbjct 2488 GGTGTGATCTAGGTTCTTTTGCTTGCGCCATGGCACCATTGTTATCACAGTAAAGATCAA 2429
Query 240 TGGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAG 299
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2428 TGGGGTCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAGCAG 2369
Query 300 CCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGTAGAATCTGCCACAG 359
||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||
Sbjct 2368 CCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCTTCAATTGTAGAGTCTGCCACAA 2309
Query 360 TGCTCTGTTTGGAACTCTTCCAGCTCACTGCTCCTCCGTTGAGACAAAAGACAAATCCTG 419
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 2308 TGCTCTGTTTGGAACTCTTCCAACTCACTGCTCCTCCGTTGGGACAAAAGACAAATCCTG 2249
Query 420 ATTGAGATCGAAAATCATCTTTGTCTGTCTGAAAGCTGGCATCGGTATAACCACTCACAA 479
||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2248 ATTAAGATCGGAAATCATCTTTGTCTGTCTGAAAGCTGGCATCAGTATAACCACTCACAA 2189
Query 480 CAAGTTCCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTAA 539
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 2188 CAAGTTCCTCACTTCCTCCATAGACCAAAAACTTATCCTTCGTTCTTCTCAAGTACTTAA 2129
Query 540 GGATGTTCTTGACTACTATCCAGTGACTTTCACCTGGATCAGACTGGTATCTGCTCGTCA 599
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 2128 GGATGTTCTTGACTACTATCTAGTGACTTTCACCTGGATCAGATTGGTATCTGCTCGTCA 2069
Query 600 TGCTCAAAGCACAAACAACATCTGGGCGAGTGCAGAGCATAGCATACATGATAGATCCTA 659
||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 2068 TGCTCAAAGCACATGCAACATCTGGGCGAGTCCAGAGCATAGCATTCATGATAGATCCTA 2009
Query 660 TAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGACACT 719
||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct 2008 TAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCATGCGTCGAAAGACACT 1949
Query 720 GAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCATGCA 779
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1948 GAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATTAAGCCTTTCTTAGAATCATGCA 1889
Query 780 TATTAAACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTTGT 839
|||| ||||| |||||||||||||| ||||||||||| | ||||||||||||||||||||
Sbjct 1888 TATTGAACCTGTGCAAGACCTTATCAATATAAGTATCCTAACTTAGTCCAATTATTTTGT 1829
Query 840 TCAATCTATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCTCCCAAGTCTTTCT 899
| ||||||||||||||||| | |||||||||||||||||||||||| |||| ||||||||
Sbjct 1828 TTAATCTATCTCTATAGATTCGTATTCCAAGAATATAGGCAGCTTCACCCATGTCTTTCT 1769
Query 900 TCTTGAAAATCCATTTACACTCAATGGCTTTTACACCATCAGGTAAATCAACCAAAGTCC 959
||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1768 TCTTGAATAGCCATTTACACTCTATGGCTTTTACACCATCAGGTAAATCAACCAAAGTCC 1709
Query 960 ATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTTAACGG 1019
|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||
Sbjct 1708 ATACTTTGTTTTGTGACATGGATTCCATTTCGGATTTCGCGGCCTCTAACCAATTATCGG 1649
Query 1020 AATCGGGGCCCATCAATGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAATCAATA 1079
||||||||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||
Sbjct 1648 AATCGGGGCCCATCAGTGCTTCTTCGTATGACGTAGGTTCATGACTTTCTATAATAAATA 1589
Query 1080 GATCATGATCATCCGTCACCCAATCTCCAAATCTATCGGGTTCGTGACGGTTCCTTTCGG 1139
|| ||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 1588 GAGCATGATCATCCATCACCCAATCTCCGAATCTATCGGGTTCGTGACGACTCCTTTCGG 1529
Query 1140 ACCTACGTACCTCAGGTTCCACAGGTATAGGTTCTACGACTCTTCGTAGATCCAACTGAT 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1528 ACCTACGTACCTCAGGTTCCACAGGTATAGGTTCTACGACTCTTCGTAGATCCAACTTAT 1469
Query 1200 GTTCTTCCTGAGAAGTTGGAACATTC-TCATGTGGTTCTCGAACTTCTTCGAGTAACACT 1258
|||||||||||||||||| |||| || | |||||||||||||||||||||||||| |||
Sbjct 1468 GTTCTTCCTGAGAAGTTGAAACA-TCACCCTGTGGTTCTCGAACTTCTTCGAGTAATACT 1410
Query 1259 TTACTCCCACTAGTTCCTTTTGAAAGAAACTC-CATTTCCAAAAAGGCACCATTTCGAGC 1317
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 1409 TTACTCCCACTAGTTCCTTTTGAAAGAAACTCTC-TTTCCAAAAAGGCACCATTTCGAGC 1351
Query 1318 AACAAACACTTTGTTGTC-AGTAGGATGGTAGAAGTAATAACTTTTGGTCTCTTTAGGAT 1376
||||||||| |||||||| | |||| ||||| |||||||||| |||||||||||| ||||
Sbjct 1350 AACAAACACGTTGTTGTCAATTAGG-TGGTAAAAGTAATAACCTTTGGTCTCTTTCGGAT 1292
Query 1377 AACCTACGAAGTAGCATTTATCAGATTTGGGTCCAAGATTATCAGTAATCAACCGTTTGA 1436
|||||||||||||||| |||||| | ||||||||||| |||||| ||||||| |||||||
Sbjct 1291 AACCTACGAAGTAGCACTTATCATACTTGGGTCCAAGCTTATCACTAATCAATCGTTTGA 1232
Query 1437 CATAAGCTTCACAACCCCAAATTTTGAGAAAAGATAAATTAGGAACCTTTCCAGTCCATA 1496
|||||| |||||||||||||| ||| | |||||| |||||||||||||||||||||||||
Sbjct 1231 CATAAGTTTCACAACCCCAAACTTTCACAAAAGACAAATTAGGAACCTTTCCAGTCCATA 1172
Query 1497 TCTCATATGGTGTCTTTTCAACTGATTTTG-TCGGACATCTGTTTAGCATAAACGCAGAC 1555
|||||||||||||||| |||||| |||||| | ||||||||||| |||||||||||| ||
Sbjct 1171 TCTCATATGGTGTCTTCTCAACTTATTTTGAT-GGACATCTGTTGAGCATAAACGCACAC 1113
Query 1556 GTCTCTAGAGCATATCCCCAAAAGGATATTGGAAGATCAGTGTGACTCATCATCGATCGA 1615
||||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||
Sbjct 1112 GTCTCTAGAGCATATCCCCAAAAGGATGGTGCAAGATCTGTGTGACTCATCATAGATCGA 1053
Query 1616 ACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCACTATGGTGTTCCT 1675
| ||||||||||||||||||||||||||||| |||||||||||||| | |||||||||
Sbjct 1052 AACATATCCAATAAAGTTCGATTTCTCCTTTTAGACACACCATTCCATTGTGGTGTTCCC 993
Query 1676 GGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCAATGAAAGCTTGGCTC 1735
|||| |||||||||||||||||||||||| ||||| |||||| || | ||| ||||||||
Sbjct 992 GGAGAAGTGAGCTGTGAAACAATTCCACATTCTCTAAGATGACCACTAAAAACTTGGCTC 933
Query 1736 AAATATTCTCCTCCACGATCTGATCGAAGAGCTTTTATTGATTTGCCAAGTTGATTTTGT 1795
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 932 AAATATTCTCCTCCACGATCTGATCGAAGAGCCTTAATTGATTTGCCAAGTTGATTTTGT 873
Query 1796 ACTTCATTCTGGAACTCCTTGAACTTTTCAAAAGATTCCGACTTATGTTTCATTAGATAA 1855
||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct 872 ACTTCATTCTGGAACTCCTTGAATTTTTCAAAGGATTCCGATTTATGTTTCATTAGATAA 813
Query 1856 ACATAACCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTTTCCTCTG 1915
||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 812 ACATAACTATATCTACTGAAGTCATCAGTAAATGTAATGAAATACTGATAGTTTCCTCTA 753
Query 1916 GCGCTTGTACTCATTAGCCCACATACATCTGTATGTATAAGGCCCAATAAGTCACTAGCC 1975
|| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 752 GCACTTGTACTCATTGGCCCACATACATCTGTATGTATAAGGCCCAATAAGTCACCAGCC 693
Query 1976 CTCTCACTGTGCCCAGTAAATGGGGCCTTAGTCATCTTTCCCAACAAACAAGATTCACAA 2035
||||||||||| ||| |||| ||||| |||||||| |||||||||||||||||||||||
Sbjct 692 CTCTCACTGTGTCCACTAAACGGGGCTTTAGTCATTTTTCCCAACAAACAAGATTCACAT 633
Query 2036 GTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGTTTTTGAATT 2095
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 632 GTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCTTTTGAATG 573
Query 2096 CGTTTCTCGTTTATATGGCCCAAACGACAATGCCAGAGAAAAGTTGGATTCAAGTCATTA 2155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 572 CGTTTCTCGTTTATATGGCCCAAACGACAATGCCAGAGAAAAGTTGGATTCAAGTCATTA 513
Query 2156 GACTTAAATCTCTTGGTACGAATGTTATAGACTGGCATGCTTTGGTTTAGAACATAAAGC 2215
||||||||| | || ||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 512 GACTTAAATATTTTTGTACGTATGTTATAGACTGGCATGCTTTGGTTTAGAACATAGAGC 453
Query 2216 CCATTCTCTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACAACATTTG 2275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 452 CCATTCTCTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACAACATTTG 393
Query 2276 TTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAACAGAGATGATATTCTTG 2335
|||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct 392 TTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAACGGAGACAATATTCTTG 333
Query 2336 TTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGGTAAAGAC 2395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 332 TTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGGTAAAGAC 273
Query 2396 AACGAATATGTTCCCACGGCTAATGCAGAAACTTTTGCTCCATTAGCCACACGTAGGTCC 2455
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 272 AACGAATATGTTCCCACGGCCAATGCAGAGACTTTTGCTCCATTAGCCACACGTAGGTCC 213
Query 2456 ACTTGTCCTTCCTCCAAAGTTCTACTGTTGTTTAGGCCATGCACATTTACACAAATGTGA 2515
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 212 ACTTGTCCTTCCTCGAAAGTTCTACTGTTGTTTAGGCCATGCACATTTACACAAATGTGA 153
Query 2516 GCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACATTTACTTCT 2575
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 152 GCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGATGTAGTAACATTTACTTCT 93
Query 2576 ATAACATAGATACCCGAAGAAGAGACCTTGAATGTTTTCTTCTTCTCCAGATCTTCCAAG 2635
||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 92 ATAACATAGATACCCGAAGAAGAAATATTGAATGTTTTCTTCTTCTCCAGATCTTCCAAG 33
Query 2636 T-TGTCAAGAGGGTTTGATCCATTCAATTTGTC 2667
| | ||| || |||||||| ||| |||||||||
Sbjct 32 TAT-TCAGGAAGGTTTGATTCATACAATTTGTC 1
> AT3G33011.1 | Symbols: | transposable element gene | chr3:13563190-13566382
REVERSE LENGTH=3193
Length=3193
Score = 2780 bits (1505), Expect = 0.0
Identities = 1690/1779 (95%), Gaps = 13/1779 (1%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTCAATGGCTTTTACACCATCAGGTAAATCAACCAA 954
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1792 TTTCTTCTTGAATATCCATTTACACTCTATGGCTTTTACACCATCAGGTAAATCAACCAA 1733
Query 955 AGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTT 1014
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1732 AGTCCATACTTTGTTTTGTGACATGGATTCCATTTCGGATTTCGCGGCCTCTAACCACTT 1673
Query 1015 AACGGAATCGGGGCCCATCAATGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAAT 1074
| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 1672 ATCGGAATCAGGGCCCATCAACGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATCAT 1613
Query 1075 CAATAGATCATGATCATCCGTCACCCAATCTCCAAATCTATCGGGTTCGTGACGGTTCCT 1134
|||||| ||||||| ||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 1612 AAATAGAGCATGATCGTCCATCACCCAATCTCCGAATCTATCGGGTTCGTGACGGCTCCT 1553
Query 1135 TTCGGACCTACGTACCTCAGGTTCCACAGGTATAGGTTCTACGACTCTTCGTAGATCCAA 1194
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1552 TTCGGACCTACGTACCTCAGGTTCCACATGTATAGGTTCTACGACTCTTCGTAGATCCAA 1493
Query 1195 -CTGATGTTCTTCCTGAGAAGTTGGAACATTC-TCATGTGGTTCTCGAACTTCTTCGAGT 1252
|| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1492 TCT-ATGTTCTTCCTGAGAAGTTGGAACA-TCACCATGTGGTTCTCGAACTTCTTCGAGT 1435
Query 1253 AACACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTC-CATTTCCAAAAAGGCACCATT 1311
|| | ||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 1434 AATAATTTACTCCCACTAGTTCCTTTTGAAAGAAACTCTC-TTTCCAAAAAGGCACCATT 1376
Query 1312 TCGAG-CAACAAACACTTTGTTGTCAGTAGGATGGTAGAAGTAATAACTTTTGGTCTCTT 1370
||| | ||||||||||||||||||||||||| ||||| |||||||||| |||||||||||
Sbjct 1375 TCG-GTCAACAAACACTTTGTTGTCAGTAGGGTGGTAAAAGTAATAACCTTTGGTCTCTT 1317
Query 1371 TAGGATAACCTACGAAGTAGCATTTATCAGATTTGGGTCCAAGATTATCAGTAATCAACC 1430
| |||||||||||||||||||| |||||||||||||||| ||| |||||||||||||| |
Sbjct 1316 TCGGATAACCTACGAAGTAGCACTTATCAGATTTGGGTCTAAGCTTATCAGTAATCAATC 1257
Query 1431 GTTTGACATAAGCTTCACAACCCCAAATTTTGAGAAAAGATAAATTAGGAACCTTTCCAG 1490
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
Sbjct 1256 GTTTGACATAAGCTTCACAACCCCAAATTTTTAGAAAAGACAAATTAGGAACCTTTCCTG 1197
Query 1491 TCCATATCTCATATGGTGTCTTTTCAACTGATTTTG-TCGGACATCTGTTTAGCATAAAC 1549
|||||||||||||||||||||| ||||||||||||| | ||||||||||| |||||||||
Sbjct 1196 TCCATATCTCATATGGTGTCTTCTCAACTGATTTTGAT-GGACATCTGTTGAGCATAAAC 1138
Query 1550 GCAGACGTCTCTAGAGCATATCCCCAAAAGGATATTGGAAGATCAGTGTGACTCATCATC 1609
|||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 1137 GCAGACGTTTCTAGAGCATATCCCCAAAAGGATGGTGGAAGATCTGTGTGACTCATCATT 1078
Query 1610 GATCGAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCACTATGGT 1669
||||||||||||||||||||||||||| | |||||||| || ||||||||||||| ||||
Sbjct 1077 GATCGAACCATATCCAATAAAGTTCGA-TCCTCCTTTCAGATACACCATTCCACTGTGGT 1019
Query 1670 GTTCCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCAATGAAAGCT 1729
||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||| ||
Sbjct 1018 GTTCCCGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCACTAAAAACT 959
Query 1730 TGGCTCAAATATTCTCCTCCACGATCTGATCGAAGAGCTTTTATTGATTTGCCAAGTTGA 1789
|||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||
Sbjct 958 TGGCTCAAATATTCTCCTCCACGATCTGATCGCAGAGCTTTGATCGATTTGCCAAGTTGA 899
Query 1790 TTTTGTACTTCATTCTGGAACTCCTTGAACTTTTCAAAAGATTCCGACTTATGTTTCATT 1849
|||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct 898 TTTTGTACTTCATTCTGGAACTCCTTGAACTTTTCAAAGGATTCCGATTTATGTTTTATT 839
Query 1850 AGATAAACATAACCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTTT 1909
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 838 AGATAATTATAACCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTTT 779
Query 1910 CCTCTGGCGCTTGTACTCATTAGCCCACATACATCTGTATGTATAAGGCCCAATAAGTCA 1969
||||| || |||||||||||| |||||||||||||||||||||| | |||||||||||||
Sbjct 778 CCTCTAGCACTTGTACTCATTGGCCCACATACATCTGTATGTATTACGCCCAATAAGTCA 719
Query 1970 CTAGCCCTCTCACTGTGCCCAGTAAATGGGGCCTTAGTCATCTTTCCCAACAAACAAGAT 2029
|||||| |||||||||| |||||||| ||||| |||||||| ||||||||||||||||||
Sbjct 718 CTAGCCTTCTCACTGTGTCCAGTAAACGGGGCTTTAGTCATTTTTCCCAACAAACAAGAT 659
Query 2030 TCACAAGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGTTTT 2089
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 658 TCACATGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCTTT 599
Query 2090 TGAATTCGTTTCTCGTTTATATGGCCCAAACGACAATGCCAGAGAAAAGTTGGATTCAAG 2149
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 598 TGAATGCGTTTCTCGTTTATATGGCCCAAACGACAATGCCAGAGAAAAGTCGGATTCAAG 539
Query 2150 TCATTAGACTTAAATCTCTTGGTACGAATGTTATAGACTGGCATGCTTTGGTTTAGAACA 2209
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 538 TCATTAGACTTAAATCTCTTGGTACGAATGTTATAGATTGACATGCTTTGGTTTAGAACA 479
Query 2210 TAAAGCCCATTCTCTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACAA 2269
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 TAGAGCCCATTCTCTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACAA 419
Query 2270 CATTTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAACAGAGATGATA 2329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 CATTTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAACAGAGATGATA 359
Query 2330 TTCTTGTTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGGT 2389
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 TTCTTATTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGGT 299
Query 2390 AAAGACAACGAATATGTTCCCACGGCTAATGCAGAAACTTTTGCTCCATTAGCCACACGT 2449
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 298 AAAGACAACGAATATGTTCCCACGGCCAATGCAGAGACTTTTGCTCCATTAGCCACACGT 239
Query 2450 AGGTCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGTTTAGGCCATGCACATTTACACAA 2509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 238 AGGTCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGTTTAGGCCATGCACATTTACACAA 179
Query 2510 ATGTGAGCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACATTT 2569
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 178 ATGTGAGCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGATGTAGTAACATTT 119
Query 2570 ACTTCTATAACATAGATACCCGAAGAAGAGACCTTGAATGTTTTCTTCTTCTCCAGATCT 2629
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 118 ACTTCTATAACATAGATACCCGAAGAAGAAATCTTGAATGTTTTCTTCTTCTCCAGATCT 59
Query 2630 TCCAAGT-TGTCAAGAGGGTTTGATCCATTCAATTTGTC 2667
||||||| || || ||||||||||| |||||||||||||
Sbjct 58 TCCAAGTATG-CAGGAGGGTTTGATTCATTCAATTTGTC 21
Score = 1432 bits (775), Expect = 0.0
Identities = 854/893 (96%), Gaps = 2/893 (0%)
Strand=Plus/Minus
Query 7 TATAAATCTAATGCCAATCGCAGCAGTATGACTCTCATGCTTAGGCTGTGGAAGAGGTTT 66
|||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||
Sbjct 3193 TATAAATCTAATGCCAATCGCAGCAGTATGACTCTCATGCTTTGGCTGCGCAAGAGGTTT 3134
Query 67 AGTAAACGGATCAGCAACATTTGCATCTGTTGGAACTCTGCTAATCTTCACATCACCTCT 126
||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 3133 GGTAAAAGGATCAGCAACATTTGCATCCGTTGAAACTCTGCTAATCTTCACATCACCTCT 3074
Query 127 ATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCTGGTGTGA 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3073 ATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCTGGTGTGA 3014
Query 187 TCTAGGTTCTTTCGCTTGAGCGATGGCTCCATTGTTATCACAGTAAAGATCGATGGGGCC 246
|||||||||||| ||||| |||||||| ||||||| ||||||||||||||| ||||| ||
Sbjct 3013 TCTAGGTTCTTTTGCTTGCGCGATGGCACCATTGTCATCACAGTAAAGATCAATGGGACC 2954
Query 247 AGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAGCCTCCTT 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2953 AGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAGCCTCCTT 2894
Query 307 AGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGTAGAA-TCTGCCACAGTGCTCT 365
|||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||
Sbjct 2893 AGCCGCTTCAGAAGCAGCTATATACTTAGCTTCAGTTGTA-AAGTCTGCCACAGTGCTCT 2835
Query 366 GTTTGGAACTCTTCCAGCTCACTGCTCCTCCGTTGAGACAAAAGACAAATCCTGATTGAG 425
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 2834 CTTTGGAACTCTTCCAACTCACTGTTCCTCCGTTGAGACAAAAGACAAATCCTGATTGTG 2775
Query 426 ATCGAAAATCATCTTTGTCTGTCTGAAAGCTGGCATCGGTATAACCACTCACAACAAGTT 485
|||| ||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||
Sbjct 2774 ATCGGAAATCATCTTTGTCTGTTTGAAAGTTGGCATCAGTATAACCACTCACAACAAGTT 2715
Query 486 CCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTAAGGATGT 545
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2714 CCTCACTTCCTCCATAGACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTAAGGATGT 2655
Query 546 TCTTGACTACTATCCAGTGACTTTCACCTGGATCAGACTGGTATCTGCTCGTCATGCTCA 605
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2654 TCTTGACTACTATCCAGTGACTTTCACCTGGATCAGATTGGTATCTGCTCGTCATGCTCA 2595
Query 606 AAGCACAAACAACATCTGGGCGAGTGCAGAGCATAGCATACATGATAGATCCTATAGCAG 665
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2594 AAGCACATGCAACATCTGGGCGAGTGCAGAGCATAACATACATGATAGATCCTATAGCAG 2535
Query 666 AAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGACACTGAGTCT 725
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 2534 AAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCATGCGTCGAAGGACACTGAGTCT 2475
Query 726 TGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCATGCATATTAA 785
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2474 TGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCATGCATATTGA 2415
Query 786 ACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTTGTTCAATC 845
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 2414 ACCTGTGCAAGACCTTATCTATATAAGTATCCTGACTTAGTCCAATTATTTTGTTTAATC 2355
Query 846 TATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCTCCCAAGTCTTTC 898
||||||||||||| |||||||||||||||||||||||||| |||| |||||||
Sbjct 2354 TATCTCTATAGATTCTTATTCCAAGAATATAGGCAGCTTCACCCATGTCTTTC 2302
> AT4G03810.1 | Symbols: | transposable element gene | chr4:1751259-1754393
FORWARD LENGTH=3135
Length=3135
Score = 2665 bits (1443), Expect = 0.0
Identities = 1637/1731 (95%), Gaps = 12/1731 (1%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTC-AATGGCTTTTACACCATCAGGTAAATCAACCA 953
|||||||||||| |||||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct 1725 TTTCTTCTTGAATATCCATTTACACTCTATTGG-TTTTACACCATCAGGTAAATCAACCA 1667
Query 954 AAGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACT 1013
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 1666 AAGTCCATACTTTGTTTTGTGACATGGATTCCATTTCAGATTTCGCGGCCTCTAACCACT 1607
Query 1014 TAACGGAATCGGGGCCCATCAATGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAA 1073
|| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1606 TATCGGAATCAGGGCCCATCAACGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATCA 1547
Query 1074 TCAATAGATCATGATCATCCGTCACCCAATCTCCAAATCTATCGGGTTCGTGACGGTTCC 1133
| |||||| ||||||| ||| |||||||||||| ||||||||||||||||||||| |||
Sbjct 1546 TAAATAGAGCATGATCGTCCATCACCCAATCTCTGAATCTATCGGGTTCGTGACGGCTCC 1487
Query 1134 TTTCGGACCTACGTACCTCAGGTTCCACAGGTATAGGTTCTACGACTCTTCGTAGATCCA 1193
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct 1486 TTTCGGACCTACGTACCTCCGGTTCCACAAGTATAGGTTCTACGACTCTTCGTAGATCCA 1427
Query 1194 ACTGATGTTCTTCCTGAGAAGTTGGAACATTC-TCATGTGGTTCTCGAACTTCTTCGAGT 1252
||||||||||||| ||||||||||||||| || | |||||||||||||||||||| |||
Sbjct 1426 ACTGATGTTCTTCTTGAGAAGTTGGAACA-TCACCCTGTGGTTCTCGAACTTCTTCAAGT 1368
Query 1253 AACACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTC-CATTTCCAAAAAGGCACCATT 1311
|| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 1367 AATACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTCTC-TTTCCAAAAAGGCACCATT 1309
Query 1312 TCGAGCAACAAACACTTTGTTGTCAGTAGGATGGTAGAAGTAATAACTTTTGGTCTCTTT 1371
|||| ||||||||||||||||||||||||| ||||| || ||||||| ||||||||||||
Sbjct 1308 TCGAACAACAAACACTTTGTTGTCAGTAGGGTGGTAAAAATAATAACCTTTGGTCTCTTT 1249
Query 1372 AGGATAACCTACGAAGTAGCATTTATCAGATTTGGGTCCAAGATTATCAGTAATCAACCG 1431
||||||||||| |||||||| |||||||||||||||||||| ||||||||||| || ||
Sbjct 1248 CGGATAACCTACAAAGTAGCACTTATCAGATTTGGGTCCAAGCTTATCAGTAATTAATCG 1189
Query 1432 TTTGACATAAGCTTCACAACCCCAAATTTTGAGAAAAGATAAATTAGGAACCTTTCCAGT 1491
|||| |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1188 TTTGGCATAAGATTCACAACCCCAAATTTTCAGAAAAGACAAATTAGGAACCTTTCCAGT 1129
Query 1492 CCATATCTCATATGGTGTCTTTTCAACTGATTTTG-TCGGACATCTGTTTAGCATAAACG 1550
||||||||||||||||||||| ||||||||||||| | ||||||||||| ||||||||||
Sbjct 1128 CCATATCTCATATGGTGTCTTCTCAACTGATTTTGAT-GGACATCTGTTGAGCATAAACG 1070
Query 1551 CAGACGTCTCTAGAGCATATCCCCAAAAGGAT-ATTGGAAGATCAGTGTGACTCATCATC 1609
||||||| |||||||||||||||||||||| | | ||||||||| ||||||||||||||
Sbjct 1069 CAGACGTTTCTAGAGCATATCCCCAAAAGGGTGA-TGGAAGATCTGTGTGACTCATCATA 1011
Query 1610 GATCGAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCACTATGGT 1669
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1010 GATCGAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCATTGTGGT 951
Query 1670 GTTCCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCAATGAAAGCT 1729
||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||| ||
Sbjct 950 GTTCCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTAAGATGATCACTAAAAACT 891
Query 1730 TGGCTCAAATATTCTCCTCCACGATCTGATCGAAGAGCTTTTATTGATTTGCCAAGTTGA 1789
|||||||||||||||||||||||||| ||||| |||||||| ||||||||||||| ||||
Sbjct 890 TGGCTCAAATATTCTCCTCCACGATCCGATCGTAGAGCTTTGATTGATTTGCCAAATTGA 831
Query 1790 TTTTGTACTTCATTCTGGAACTCCTTGAACTTTTCAAAAGATTCCGACTTATGTTTCATT 1849
||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||
Sbjct 830 TTTTGTACTTCATTCTGGAACTCCTTGAAATTTTCAAAAGATTTCGATTTATGTTTCATT 771
Query 1850 AGATAAACATAACCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTTT 1909
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 770 AGATAAACATAACCATATCTACTGAAATCATCAGTAAATGTAATGAAGTACTGATAGTTT 711
Query 1910 CCTCTGGCGCTTGTACTCATTAGCCCACATACATCTGTATGTATAAGGCCCAATAAGTCA 1969
||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 710 CCTCTAGCACTTGTACTCATTGGCCCACATACATCTGTATGTATAAGGCCCAATAAGTCA 651
Query 1970 CTAGCCCTCTCACTGTGCCCAGTAAATGGGGCCTTAGTCATCTTTCCCAACAAACAAGAT 2029
||||||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||
Sbjct 650 CTAGCCCTCTCACTGTGTCCAGTAAACGGGGCTTTAGTCATTTTTCCCAACAAACAAGAT 591
Query 2030 TCACAAGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGTTTT 2089
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 590 TCACATGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCTTT 531
Query 2090 TGAAT-TCGTTTCTCGTTTATATGGCCCAAACGACAATGCCAGAGAAAAGTTGGATTCAA 2148
||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 530 TGAATGT-GTTTCTCGTTTATATGGCCCAAACGACAATGCCAGAGAAAAGTGGGATTCAA 472
Query 2149 GTCATTAGACTTAAATCTCTTGGTACGAATGTTATAGACTGGCATGCTTTGGTTTAGAAC 2208
|||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 471 GTCATTAGACTTAAATTTCTTGGTACGAATGTTATAGATTGGCATGCTTTGGTTCAGAAC 412
Query 2209 ATAAAGCCCATTCTCTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACA 2268
|| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 411 ATGTAGCCCATTATCTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACA 352
Query 2269 ACATTTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAACAGAGATGAT 2328
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 351 ACATTTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAACGGAGATGAT 292
Query 2329 ATTCTTGTTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGG 2388
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 291 ATTCTTGTTTATTGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGG 232
Query 2389 TAAAGACAACGAATATGTTCCCACGGCTAATGCAGAAACTTTTGCTCCATTAGCCACACG 2448
||||| |||||||||||||||||||| |||||| | |||||||||||||||||||||||
Sbjct 231 CAAAGATAACGAATATGTTCCCACGGCCAATGCACAGACTTTTGCTCCATTAGCCACACG 172
Query 2449 TAGGTCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGTTTAGGCCATGCACATTTACACA 2508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 171 TAGGTCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGTTTAGGCCATGCACATTTACACA 112
Query 2509 AATGTGAGCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACATT 2568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 111 AATGTGAGCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACATT 52
Query 2569 TACTTCTATAACATAGATACCCGAAGAAGAGACCTTGAATGTTTTCTTCTT 2619
|||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 51 TACTTCTATAACATAGATACCCGAAGAAGAAATCTTGAATGTTTTCTTCTT 1
Score = 1448 bits (784), Expect = 0.0
Identities = 860/898 (96%), Gaps = 0/898 (0%)
Strand=Plus/Minus
Query 1 CATCTTTATAAATCTAATGCCAATCGCAGCAGTATGACTCTCATGCTTAGGCTGTGGAAG 60
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct 3132 CATCTTTATAAATCTAATGCCAATCGCAGTAGTATGACTCTCATGCTTTGGCTGTGGAAG 3073
Query 61 AGGTTTAGTAAACGGATCAGCAACATTTGCATCTGTTGGAACTCTGCTAATCTTCACATC 120
|||||| ||||| ||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct 3072 AGGTTTGGTAAAATGATCAGCAACATTTGCATCCGTTGAAACTCTGCTAATCTTCACATC 3013
Query 121 ACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCTG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3012 ACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCTG 2953
Query 181 GTGTGATCTAGGTTCTTTCGCTTGAGCGATGGCTCCATTGTTATCACAGTAAAGATCGAT 240
||||||| |||||||||| ||||| |||||||| ||||||||||||||||||||||| ||
Sbjct 2952 GTGTGATTTAGGTTCTTTTGCTTGTGCGATGGCACCATTGTTATCACAGTAAAGATCAAT 2893
Query 241 GGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAGC 300
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2892 GGGACCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAAC 2833
Query 301 CTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGTAGAATCTGCCACAGT 360
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 2832 CTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCTTCAGTTGTAGAGTCTGCCACAGT 2773
Query 361 GCTCTGTTTGGAACTCTTCCAGCTCACTGCTCCTCCGTTGAGACAAAAGACAAATCCTGA 420
||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 2772 GCTCTGTTTGGTACTCTTCCAACTCACTGCTCCTCCGTTGAGACAAAAGAAAAATCCTGA 2713
Query 421 TTGAGATCGAAAATCATCTTTGTCTGTCTGAAAGCTGGCATCGGTATAACCACTCACAAC 480
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2712 TTGAGATCGGAAATCATCTTTGTCTGTCTGAAAGCTGGCATCAGTATAACCACTCACAAC 2653
Query 481 AAGTTCCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTAAG 540
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2652 AAGTTCCTCACTTCCTCCATAGACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTAAA 2593
Query 541 GATGTTCTTGACTACTATCCAGTGACTTTCACCTGGATCAGACTGGTATCTGCTCGTCAT 600
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2592 GATGTTCCTGACTACTATCCAGTGACTTTCACCTGGATCAGATTGGTATCTGCTCGTCAT 2533
Query 601 GCTCAAAGCACAAACAACATCTGGGCGAGTGCAGAGCATAGCATACATGATAGATCCTAT 660
|||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 2532 GCTCAAAGCACATGCAACATCGGGGCGAGTGTAGAGCATAGCATACATGATAGATCCTAT 2473
Query 661 AGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGACACTG 720
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 2472 AGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCATGCGTCGAAGGACACTG 2413
Query 721 AGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCATGCAT 780
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2412 AGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAATCCTTTCTTAGAATCATGCAT 2353
Query 781 ATTAAACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTTGTT 840
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2352 ATTGAACCTATGCAAGACCTTATCTATATAAGTATCCTGACTTAGTCCAATTATTTTGTT 2293
Query 841 CAATCTATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCTCCCAAGTCTTTC 898
||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||
Sbjct 2292 TAATCTATCTCTATAGATTCTTATTCCAAGAATATAGGCAGCTTCACCCATGTCTTTC 2235
> AT3G42471.1 | Symbols: | transposable element gene | chr3:14610379-14613555
REVERSE LENGTH=3177
Length=3177
Score = 2562 bits (1387), Expect = 0.0
Identities = 1648/1772 (93%), Gaps = 26/1772 (1%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTCAATGGCTTTTACACCATCAGGTAAATCAACCAA 954
||||||||| ||||||||||||||||| ||||||||||||| || |||||||||||||||
Sbjct 1755 TTTCTTCTTAAAAATCCATTTACACTCTATGGCTTTTACACTATTAGGTAAATCAACCAA 1696
Query 955 AGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTT 1014
||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1695 AGTCCATTCTTTGTTTTGTGACATGGATTCCATTTCGGATTTTGCGGCCTCTAACCACTT 1636
Query 1015 AACGGAATCGGGGCCCATCAATGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAAT 1074
| | |||||||||||||||||||||||||||| |||||||||||||||||| | ||||||
Sbjct 1635 ATCAGAATCGGGGCCCATCAATGCTTCTTCGTTTGACGTAGGTTCATCACTTTTTATAAT 1576
Query 1075 CAATAGATCATGATCATCCGTCACCCAATCTCCAAATCTATCGGGTTCGTGACGGTTCCT 1134
|||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 1575 AAATAGAGCATGATCATCCGTCACTCAATCTATGAATCTATCGGGTTCGTGACGGTTCCT 1516
Query 1135 TTCGGACCTACGTACCTCAGGTTCCACAGGTATAGGTTCTACGACTCTTCGTAGATCCAA 1194
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1515 TTCGGACCTACCTACCTCAGGTTCCACACGTATAGGTTCTACGACTCTTCGTAGATCCAA 1456
Query 1195 CTG-ATGTTCTTCCTGAGAAGTTGGAACATTC-TCATGTGGTTCTCGAACTTCTTCGAGT 1252
| | ||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1455 C-GTATGTTCTTCCTGAGAAGTTGGAACA-TCACCATGTGGTTCTCGAACTTCTTCGAGT 1398
Query 1253 AACACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTC-CATTTCCAAAAAGGCACCATT 1311
|| ||||||||||||||||||||||||||||||||||| | ||||| || |||||||
Sbjct 1397 AATACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTCTC-TTTCC---AA--CACCATT 1344
Query 1312 TCGAGCAACAAACACTTTGTTGTCAGTAGGATGGTAGAAGTAATAACTTTTGGTCTC-TT 1370
|||||||||||||||||| | |||||| || ||||| |||||||||| ||||||||| ||
Sbjct 1343 TCGAGCAACAAACACTTTCTAGTCAGTTGGGTGGTAAAAGTAATAACCTTTGGTCTCATT 1284
Query 1371 TAGGATAACCTACGAAGTAGCATTTATCAGATTTGGGTCCAAGATTATCAGTAATCAACC 1430
| ||||||| ||||||||| || ||||||| |||||||||||| |||||||||||||| |
Sbjct 1283 T-GGATAACTTACGAAGTATCACTTATCAGGTTTGGGTCCAAGCTTATCAGTAATCAATC 1225
Query 1431 GTTTGACATAAGCTTCACAACCCCAAATTTTGAGAAAAGATAAATTAGGAACCTTTCCAG 1490
||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1224 ATTTGACACAAGCTTCACAACCCCAAATTTTCAGAAAAGACAAATTAGGAACCTTTCCAA 1165
Query 1491 TCCATATCTCATATGGTGTCTTTTCAACTGATTTTG-TCGGACATCTGTTTAGCATAAAC 1549
|||||||||||||||||||||| ||||||||||||| | ||||||||||| |||||||||
Sbjct 1164 TCCATATCTCATATGGTGTCTTCTCAACTGATTTTGAT-GGACATCTGTTGAGCATAAAC 1106
Query 1550 GCAGACGTCTCTAGAGCATATCCCCAAAAGGATATTGGAAGATCAGTGTGACTCATCATC 1609
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 1105 GCAGACGTCTCTAGAGCATATCCCCAAAAGGATGGTGGAAGATCTGTGTGACTCATCATA 1046
Query 1610 GATCGAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCACT-ATGG 1668
|||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 1045 GATCAAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCA-TGGTGG 987
Query 1669 TGTTCCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCAATGAAAGC 1728
|||||| ||||||||||||| |||||| |||||||| |||| ||||||||| | ||| |
Sbjct 986 TGTTCCCGGAGGAGTGAGCTCTGAAACCATTCCACA--CTCTAAGATGATCACTAAAAAC 929
Query 1729 TTGGCTCAAATATTCTCCTCCACGATCTGATCGAAGAGCTTTTATTGATTTGCCAAGTTG 1788
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 928 TTGGCTCAAATATTCTCCTCCACGATCTGATCGAAGAGCTTTAATTGATTTGCCAAGTTG 869
Query 1789 ATTTTGTACTTCATTCTGGAACTCCTTGAACTTTTCAAAAGATTCCGACTTATGTTTCAT 1848
|||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct 868 ATTTTGTACTTCATTCTGAAACTCCTTGAACTTTTCAAAGGATTCCGATTTATGTTTCAT 809
Query 1849 TAGATAAACATAACCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTT 1908
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 808 TAGATAAATATAATCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTT 749
Query 1909 TCCTCTGGCGCTTGTACTCATTAGCCCACATACATCTGTATGTATAAGGCCCAATAAGTC 1968
|||||| | |||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct 748 TCCTCTAACACTTGTACTCATTGGCCCACATACATTTGTATGTATAAGGCCCAATAAGTC 689
Query 1969 ACTAGCCCTCTCACTGTGCCCAGTAAATGGGGCCTTAGTCATCTTTCCCAACAAACAAGA 2028
||||||||||||| |||| ||||||| || || |||||||| ||| |||||||||||||
Sbjct 688 ACTAGCCCTCTCATTGTG-TCAGTAAACGGAGCTTTAGTCATTTTTTCCAACAAACAAGA 630
Query 2029 TTCACAAGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGTTT 2088
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 629 TTCACATGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCTT 570
Query 2089 TTGAATTCGTTTCTCGTTTATATGGCCCAAACGACAATGCCAGAGAAA-AGTTGGATTCA 2147
|||||| |||||||||||| |||||||||||||||||||||| ||||| | |||||||||
Sbjct 569 TTGAATGCGTTTCTCGTTTTTATGGCCCAAACGACAATGCCAAAGAAACA-TTGGATTCA 511
Query 2148 AGTCATTAGACTTAAATCTCTTGGTACGAATGTTATAGACTGGCATGCTTTGGTTTAGAA 2207
||||||||||||||||| |||||||| |||||||||||| |||||||| ||||||||||
Sbjct 510 AGTCATTAGACTTAAATTTCTTGGTATGAATGTTATAGATTGGCATGC-TTGGTTTAGAC 452
Query 2208 CATAAAGCCCATTCTCTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAAC 2267
|||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 451 CATAGAGTCCATTCTCTAATGGAGCGCTACCATAAAACATATCATCTCAATCAAATGAAC 392
Query 2268 AACATTTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAACAGAGATGA 2327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 391 AACATTTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAACAGAGATGA 332
Query 2328 TATTCTTGTTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAG 2387
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 331 TTTTCTTGTTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCATGAAG 272
Query 2388 GTAAAGACAACGAATATGTTCCCACGGCTAATGCAGAAACTTTTGCTCCATTAGCCACAC 2447
| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 271 GCAAAGACAACGAATATGTTCCCACGGCCAATGCAGAGACTTTTGCTCCATTAGCCACAC 212
Query 2448 GTAGGTCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGTTTAGGCCATGCACATTTACAC 2507
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 211 GTAAGTCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGTTTAGGCCATGCACATATACAC 152
Query 2508 AAATGTGAGCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACAT 2567
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 151 AAATGTGAGCACCAAAACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACAT 92
Query 2568 TTACTTCTATAACATAGATACCCGAAGAAGAGACCTTGAATGTTTTCTTCTTCT-CCAGA 2626
|||| |||||||||||||||||||||||||| | |||||||||||||||||| | |||||
Sbjct 91 TTACGTCTATAACATAGATACCCGAAGAAGAAATCTTGAATGTTTTCTTCTTTTTCCAGA 32
Query 2627 TCTTCCAAGT-TGTCAAGAGGGTTTGATCCAT 2657
|||||||||| | ||| ||||||||||| |||
Sbjct 31 TCTTCCAAGTAT-TCAGGAGGGTTTGATGCAT 1
Score = 1376 bits (745), Expect = 0.0
Identities = 849/900 (94%), Gaps = 4/900 (0%)
Strand=Plus/Minus
Query 1 CATCTTTATAAATCTAATGCCAATCGCAGCAGTATGACTCTCATGCTTAGGCTGTGGAAG 60
||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct 3162 CATCTTTATAAATCTAATGCCAATCGCAGCAGTATGAGTCTCATGCTTCGGCTGCAGAAG 3103
Query 61 AGGTTTAGTAAACGGATCAGCAACATTTGCATCTGTTGGAACTCTGCTAATCTTCACATC 120
|||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct 3102 AGGTTTAGTAAAAGGATCAGCAACATTTGCATCCGTTGAAACTCTGCTAATCTTCACATC 3043
Query 121 ACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCTG 180
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3042 ACCTCTATTAATAATCTCACGAATGAGATGATATCGCCTTTGTATGTGTTTGGATTTCTG 2983
Query 181 GTGTGATCTAGGTTCTTTCGCTTGA-GCGATGGCTCCATTGTTATCACAGTAAAGATCGA 239
|||||||||||||||||| || | | |||||||| ||||| ||||||||||||||||| |
Sbjct 2982 GTGTGATCTAGGTTCTTTTGCCT-ACGCGATGGCACCATTATTATCACAGTAAAGATCAA 2924
Query 240 TGGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAG 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2923 TGGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAC 2864
Query 300 CCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGTAGAATCTGCCACAG 359
||||||||||||||| ||||||||||||||||||||| | ||| ||||| ||||||||||
Sbjct 2863 CCTCCTTAGCCGCTTTAGAAGCAGCTATATACTCAGCTTAAGTCGTAGAGTCTGCCACAG 2804
Query 360 TGCTCTGTTTGGAACTCTTCCAGCTCACTGCTCCTCCGTTGAGACAAAAGACAAATCCTG 419
|||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |
Sbjct 2803 TGCTCTGTTTGGAACTCTTCCAACTCACTGCTCCTCCGTTGAGATAAAAGACAAATCCAG 2744
Query 420 ATTGAGATCGAAAATCATCTTTGTCTGTCTGAAAGCTGGCATCGGTATAACCACTCACAA 479
|||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2743 ATTGTGATCGGAAATCATCTTTGTCTGTCTGAAAGCTGGCATCAGTATAACCACTCACAA 2684
Query 480 CAAGTTCCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTAA 539
||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 2683 CAAGTTCCTCACTACCTTCATAGACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTAA 2624
Query 540 GGATGTTCTTGACTACTATCCAGTGACTTTCACCTGGATCAGACTGGTATCTGCTCGTCA 599
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 2623 GGATGTTCTTGACTACTATCCAGTGACCTTCACCTGGATCAGATTGGTATCTGCTCGTCA 2564
Query 600 TGCTCAAAGCACAAACAACATCTGGGCGAGTGCAGAGCATAGCATACATGATAGATCCTA 659
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2563 TGCTCAAAGCACATGCAATATCTGGGCGAGTGCAGAGCATAGCATACATGATAGATCCTA 2504
Query 660 TAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGACACT 719
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct 2503 TAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCATGCGTCGAAGGACATT 2444
Query 720 GAGTCTTGCTAAGAGTTATGCCAT-GAGACATTGGTATAAAGCCTTTCTTAGAATCATGC 778
||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |
Sbjct 2443 GAGTCTTGCTAAGAGTTATGC-ATTGAGACATTGGTATAAAGCCTTTCTTAGAATCATCC 2385
Query 779 ATATTAAACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTTG 838
||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 2384 ATATTGAACCTGTGCAAGACCTTATCAATATAAGTATCCTGACTTAGTCCAATTATTTTG 2325
Query 839 TTCAATCTATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCTCCCAAGTCTTTC 898
|| ||||||||||||||||| |||||||||||||||||||||||||| || | |||||||
Sbjct 2324 TTTAATCTATCTCTATAGATTCTTATTCCAAGAATATAGGCAGCTTCGCCTATGTCTTTC 2265
> AT4G07840.1 | Symbols: | transposable element gene | chr4:4652507-4655715
REVERSE LENGTH=3209
Length=3209
Score = 2553 bits (1382), Expect = 0.0
Identities = 1653/1783 (93%), Gaps = 22/1783 (1%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTCAATGGCTTTTACACCATCAGGTAAATCAACCAA 954
||||||||| |||||| |||||||||| ||||||||||||||||||| |||| |||| ||
Sbjct 1819 TTTCTTCTTAAAAATCTATTTACACTCTATGGCTTTTACACCATCAGATAAAGCAACTAA 1760
Query 955 AGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTT 1014
||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||
Sbjct 1759 AGTCCATACTTTGTTTTGTGACATGGATTCCATTTTGGATTTTGCGGCCTCTAACCACTT 1700
Query 1015 AACGGAATCGGGGCCCATCAATGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAAT 1074
| ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct 1699 ATCGGAATCGGGGTCCATCAGTGCTTCTTCGTATGACGTAGGCTCATCACTCTCTATAAT 1640
Query 1075 CAATAGA-TCATGATCATCCGTCACCCAATCTCCAAATCTATCGGGTTCGTGACGGTTCC 1133
|||||| | |||||||||||||||||||||| | ||||||||||||||||||||| |||
Sbjct 1639 AAATAGAGT-ATGATCATCCGTCACCCAATCTTCGAATCTATCGGGTTCGTGACGGCTCC 1581
Query 1134 TTTCGGACCTACGTACCTCAGGTTCCACAGGTATAGGTTCTACGACTCTTCGTAGATCCA 1193
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 1580 TTTCGGACCTACGTACCTCAGGTTCCACATGTATAGGTTCTACGACTCTTTGTAGATCCA 1521
Query 1194 ACTG-ATGTTCTTCCTGAGAAGTTGGAACATTC-TCATGTGGTTCTCGAACTTCTTCGAG 1251
|| | ||||||||||||||||||||||||| || |||||||||||| ||||||||||||
Sbjct 1520 AC-GTATGTTCTTCCTGAGAAGTTGGAACA-TCACCATGTGGTTCTCAAACTTCTTCGAG 1463
Query 1252 TAACACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTC-CATTTCCAAAAAGGCACCAT 1310
||| |||| |||| ||||||||||||||||||||||||| | ||||| ||||||||||||
Sbjct 1462 TAATACTTGACTCTCACTAGTTCCTTTTGAAAGAAACTCTC-TTTCC-AAAAGGCACCAT 1405
Query 1311 TTCGAGCAACAAACACTTTGTTGTCAGTAGGATGGTAGAAGTAATAACTTTTGGTCTCTT 1370
|||||||||||||||||||||| |||||||| ||||| |||||||||| |||||||||||
Sbjct 1404 TTCGAGCAACAAACACTTTGTTATCAGTAGGGTGGTAAAAGTAATAACCTTTGGTCTCTT 1345
Query 1371 TAGGATAACCTACGAAGTAGCATTTATCAGATTTGGGTCCAAGATTATCAGTAATCAACC 1430
| |||||||||||||| || || |||||||||||||||||||| |||||||||||||| |
Sbjct 1344 TCGGATAACCTACGAAATAACACTTATCAGATTTGGGTCCAAGCTTATCAGTAATCAATC 1285
Query 1431 GTTTGACATAAGCTTCACAACCCCAAATTTTGAGAAAAGATAAATTAGGAACCTTTCCAG 1490
||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||
Sbjct 1284 GTTTGACATAAGCTTCACAGCCCAAAATTTTCAGAAAAGATAAATTAGGAACCTTTCCAG 1225
Query 1491 TCCATATCTCATATGGTGTCTTTTCAACTGATTTTG-TCGGACATCTGTTTAGCATAAAC 1549
|||||||||||||||||||||| ||||||||||||| | ||||||||||| |||||||||
Sbjct 1224 TCCATATCTCATATGGTGTCTTCTCAACTGATTTTGAT-GGACATCTGTTGAGCATAAAC 1166
Query 1550 GCAGACGTCTCTAGAGCATATCCCCAAAAGGAT-ATTGGAAGATCAGTGTGACTCATCAT 1608
|| |||| ||||| |||||||||||||| ||| | ||||||||| ||||||||||||||
Sbjct 1165 ACATACGTTTCTAGTGCATATCCCCAAAAAGATGA-TGGAAGATCTGTGTGACTCATCAT 1107
Query 1609 CGATCGAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCAC-TATG 1667
|||||||||||||||||||||||| ||||||||||||| ||||||||||||| | | ||
Sbjct 1106 TGATCGAACCATATCCAATAAAGTTTGATTTCTCCTTTCAGACACACCATTCC-CTTGTG 1048
Query 1668 GTGTTCCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCAATGAAAG 1727
||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 1047 GTGTTCCCGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCACTAAAAA 988
Query 1728 CTTGGCTCAAATATTCTCCTCCACGATCTGATCGAAGAGCTTTTATTGATTTGCCAAGTT 1787
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 987 CTTGGCTCAAATATTCTCCTCCACGATCTGATCGTAGAGCTTTGATTGATTTGCCAAGTT 928
Query 1788 GATTTTGTACTTCATTCTGGAACTCCTTGAACTTTTCAAAAGATTCCGACTTATGTTTCA 1847
||||| ||||||||| |||||||||||| |||||||||| |||||| | ||||||||||
Sbjct 927 TATTTTTTACTTCATTTTGGAACTCCTTGGACTTTTCAAAGGATTCCAATTTATGTTTCA 868
Query 1848 TTAGATAAACATAACCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGT 1907
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 867 TTAGATAAACATAACCATATCTATTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGT 808
Query 1908 TTCCTCTGGCGCTTGTACTCATTAGCCCACATACATCTGTATGTATAAGGCCCAATAAGT 1967
||||||| || ||||| |||||| |||||||| |||||||||||||||||||||||||||
Sbjct 807 TTCCTCTAGCACTTGTTCTCATTGGCCCACAT-CATCTGTATGTATAAGGCCCAATAAGT 749
Query 1968 CACTAGCCCTCTCACTGTGCCCAGTAAATGGGGCCTTAGTCATCTTTCCCAACAAACAAG 2027
|||||| ||| |||||||| |||||||| || || |||||||| ||||||||||||||||
Sbjct 748 CACTAGTCCTTTCACTGTGTCCAGTAAACGGTGCTTTAGTCATTTTTCCCAACAAACAAG 689
Query 2028 ATTCACAAGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGTT 2087
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 688 ATTCACATGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCT 629
Query 2088 TTTGAAT-TCGTTTCTCGTTTATATGGCCCAAACGACAATGCCAGAGAAAAGTTGGATTC 2146
||||||| | ||||||| ||||||||||| |||||||||||| |||||||||||||||||
Sbjct 628 TTTGAATGT-GTTTCTCATTTATATGGCCAAAACGACAATGCTAGAGAAAAGTTGGATTC 570
Query 2147 AAGTCATT-AGACTTAAATCTCTTGGTACGAATGTTATAGACTGGCATGCTTTGGTTTAG 2205
|||| ||| | |||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 569 AAGTGATTTA-ACTTAAATCTCTTGGTGCGAATGTTATAGATTGGCATGCTTTGGTTTAG 511
Query 2206 AACATAAAGCCCATTCTCTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGA 2265
|||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 510 AACATAGAGCTCATTCTCTAATGGAGCGCTACCATAAAACATATCATTTCGATCAAATGA 451
Query 2266 ACAACATTTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAACAGAGAT 2325
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 450 ACAACATTTGTTCTTGATCAAAAAGTGAAAACCTTCCATGTCCAAACATGAAACGGAGAT 391
Query 2326 GATATTCTTGTTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGA 2385
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 390 GATATTCTTGTTTATAGCATGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGA 331
Query 2386 AGGTAAAGACAACGAATATGTTCCCACGGCTAATGCAGAAACTTTTGCTCCATTAGCCAC 2445
||| |||||||| ||||||||||||||| | |||| ||| ||| |||||||||||||||
Sbjct 330 AGGAAAAGACAAGGAATATGTTCCCACGACCAATGTAGAGACTCTTGCTCCATTAGCCAT 271
Query 2446 ACGTAGGTCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGTTTAGGCCATGCACATTTAC 2505
|||||||||||||||||||||||||| |||| |||||||||||| |||||||| ||||||
Sbjct 270 ACGTAGGTCCACTTGTCCTTCCTCCATAGTTATACTGTTGTTTATGCCATGCATATTTAC 211
Query 2506 ACAAATGTGAGCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAAC 2565
|||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||
Sbjct 210 ACAAATGTGAGCACCACAGCCGGTATCCAATTCCCAAGGAGTAAAACCAGAAGTAGTAAC 151
Query 2566 ATTTACTTCTATAACATAGATACCCGAAGAAGAGACCTTGAATGTTTTCTTCTTCTCCAG 2625
||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||
Sbjct 150 ATTTACTTCTATAACATAGATACCCGAAGAAGAAATCTTGAACGTTTTATTCTTCTCCAG 91
Query 2626 ATCTTCCAAGTTGT-CAAGAGGGTTTGATCCATTCAATTTGTC 2667
|| |||||||| || ||||||||||||||||||||||||||||
Sbjct 90 ATTTTCCAAGT-GTTCAAGAGGGTTTGATCCATTCAATTTGTC 49
Score = 1253 bits (678), Expect = 0.0
Identities = 828/899 (92%), Gaps = 15/899 (2%)
Strand=Plus/Minus
Query 1 CATCTTTATAAATCTAATGCCAATCGCAG-CAGTATGACTCTCATGCTTAGGCTGTGGAA 59
||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||| ||||
Sbjct 3206 CATCTTTATAAATCTAATGCCAATCACAGTC-GTATGACTCTCATGCTTCGGCTGCGGAA 3148
Query 60 GAGGTTTAGTAAACGGATCAGCAACATTTGCATCTGTTGGAACTCTGCTAATCTTCACAT 119
||||||| ||||| ||||||| |||||||||||| |||| ||||||||||||||||||||
Sbjct 3147 GAGGTTTTGTAAAAGGATCAGTAACATTTGCATCCGTTGAAACTCTGCTAATCTTCACAT 3088
Query 120 CACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCT 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3087 CACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCT 3028
Query 180 GGTGTGATCTAGGTTCTTTCGCTTGAGCGATGGCTCCATTGTTATCACAGTAAAGATCGA 239
||||||||||| ||||||| | ||| |||||||| ||||||||||||||||||||||| |
Sbjct 3027 GGTGTGATCTACGTTCTTTTGTTTGCGCGATGGCACCATTGTTATCACAGTAAAGATCAA 2968
Query 240 TGGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAG 299
|| |||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2967 TGAGGCCAGGAATATTAGGAACCACACTAAGTTCAGTAATGAACTTCCTAATCCAAACAG 2908
Query 300 CCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGTAGAATCTGCCACAG 359
|||||||| | |||| |||||||| | ||| |||||| |||| ||||||||||
Sbjct 2907 CCTCCTTAACTGCTTTTGAAGCAGC---A-ACT-----TCAGTTATAGAGTCTGCCACAG 2857
Query 360 TGCTCTGTTTGGAACTCTTCCAGCTCACTG-CTCCTCCGTTGAGACAAAAGACAAATCCT 418
|||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||
Sbjct 2856 TGCTCTGTTTGGAACTCTTCCAACTCAC-GACTCCTCCGTTGAGACAAAAGACAAATCCT 2798
Query 419 GATTGAGAT-CGAAAATCATCTTTGTCTGTCTGAAAGCTGGCATCGGTATAACCACTCAC 477
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2797 AATTGAGATAAAAAAATCATCTTTGTCTGTCTGAAAGCTGGCATCACTATAACCACTCAC 2738
Query 478 AACAAGTTCCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTT 537
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct 2737 AACAAGTTCCTCACTTCCTCCATAGACCAAACACTTATCCTTAGTTCTTCTCAAGTACTT 2678
Query 538 AAGGATGTTCTTGACTACTATCCAGTGACTTTCACCTGGATCAGACTGGTATCTGCTCGT 597
| |||||||||||||||||||||| | |||||||||||||||||| | ||||||||||||
Sbjct 2677 ATGGATGTTCTTGACTACTATCCAATAACTTTCACCTGGATCAGA-TTGTATCTGCTCGT 2619
Query 598 CATGCTCAAAGCACAAACAACATCTGGGCGAGTGCAGAGCATAGCATACATGATAGATCC 657
||||||| ||||||| ||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 2618 CATGCTCCAAGCACATGCAACATCTGGGAGAGTGCAAAGCATAGCATACATGATAGATCC 2559
Query 658 TATAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGACA 717
||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 2558 TATAGTAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCATGCGTCGAAGGACG 2499
Query 718 CTGAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCATG 777
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2498 CTGAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGTCTTTCTTAGAATCATG 2439
Query 778 CATATTAAACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTT 837
|||||| ||| | |||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 2438 CATATTGAACGTGTGCAAGACCTTATCTATATAAGTATCCTGACTTAGTCCAATTACTTT 2379
Query 838 GTTCAATCTATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCTCCCAAGTCTT 896
||| ||||||||| ||||||| |||||||||||||||||||||||||| |||| |||||
Sbjct 2378 GTTTAATCTATCTTTATAGATTCTTATTCCAAGAATATAGGCAGCTTCACCCATGTCTT 2320
> AT3G30747.1 | Symbols: | transposable element gene | chr3:12393632-12396810
FORWARD LENGTH=3179
Length=3179
Score = 1947 bits (1054), Expect = 0.0
Identities = 1273/1377 (92%), Gaps = 21/1377 (2%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTCAATGGCTTTTACACCATCAGGTAAATCAACCAA 954
||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1716 TTTCTTCTTAAAAATCCATTTACACTTTATGGCTTTTACACCATCAGGTAAATCAACCAA 1657
Query 955 AGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTT 1014
||| ||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1656 AGTTCATACTTCGTTTTGTGACATGGATTCCATTTCGGATTTTGCGGCCTCTAACCACTT 1597
Query 1015 AACGGAATCGGGGCCCATCAATGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAAT 1074
| |||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||
Sbjct 1596 ATCGGAATCGGGGCCCATCAGCGCTTCTTCGTAAGACATAGGTTCATCACTCTCTATAAG 1537
Query 1075 CAATAGATCATGATCATCCGTCACCCAATCTCCAAATCTATCGGGTTCGTGACGGTTCCT 1134
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1536 AAATAGAGCATGATCATCCGTCACCCAATCTCCAAATCTATCGGGTTCGTGACGGCTCCT 1477
Query 1135 TTCGGACCTACGTACCTCAGGTTCCACAGGTATAGGTTCTACGACTCTTCGTAGATCC-A 1193
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1476 TTCGGACCTACGTACCTCAGGTTCCACATGTATAGGTTCTACGACTCTTCGTAGATCCAA 1417
Query 1194 AC-TGATGTTCTTCCTGAGAAGTTGGAACATTC-TCATGTGGTTCTCGAACTTCTTCGAG 1251
|| | ||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 1416 ACAT-ATGTTCTTCCTGAGAAGTTGGAACA-TCACCATGTGGTTCTCGAACTTCTTCGAG 1359
Query 1252 TAACACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTC-CATTTCCAAAAAGGCACCAT 1310
||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 1358 TAATACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTCTC-TTTCCAAAAAGGCACCAT 1300
Query 1311 TTCGAGCAACAAACACTTTGTTGTCAGTAGGATGGTAGAAGTAATAACT-TTTGGTCTCT 1369
|||||||||||||| |||||||||||||||| ||||| ||||||||| | |||||||||
Sbjct 1299 TTCGAGCAACAAACTCTTTGTTGTCAGTAGGGTGGTAAAAGTAATAA-TCGTTGGTCTCT 1241
Query 1370 TTAGGATAACCTACGAAGTAGCATTTATCAGATTTGGGTCCAAGATTATCAGTAATCAAC 1429
|| |||||||||||||| ||||| |||||| ||||||||||||| ||||||||||||||
Sbjct 1240 TTTGGATAACCTACGAAATAGCACTTATCATATTTGGGTCCAAGCTTATCAGTAATCAAT 1181
Query 1430 CGTTTGACATAAGCTTCACAACCCCAAATTTTGAGAAAAGATAAATTAGGAACCTTTCCA 1489
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1180 CGTTTGACATAAGCTTCACAACCCCAAATTTTCAGAAAAGACAAATTAGGAACCTTTCCA 1121
Query 1490 GTCCATATCTCATATGGTGTCTTTTCAACTGA-TTTTGTCGGACATCTGTTTAGCATAAA 1548
||||||||||||||||||||||| |||||||| |||| | ||||||||||| ||||||||
Sbjct 1120 GTCCATATCTCATATGGTGTCTTCTCAACTGATTTTTAT-GGACATCTGTTGAGCATAAA 1062
Query 1549 CGCAGACGTCTCTAGAGCATATCCCCAAAAGGAT-ATTGGAAGATCAGTGTGACTCATCA 1607
|||||| | |||| ||||||||||||||||||| | ||||||||| |||||| ||||||
Sbjct 1061 CGCAGATATTTCTAAAGCATATCCCCAAAAGGATGA-TGGAAGATCTGTGTGATTCATCA 1003
Query 1608 TCGATCGAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCACTATG 1667
|||||||||||||||||||||||||| ||||||||||||| || ||||||||||| | ||
Sbjct 1002 TCGATCGAACCATATCCAATAAAGTTTGATTTCTCCTTTCAGATACACCATTCCATTGTG 943
Query 1668 GTGTTCCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCAATGAAAG 1727
|| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 942 GTATTCCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCACTAAAAA 883
Query 1728 CTTGGCTCAAATATTCTCCTCCACGATCTGATCGAAGAGCTTTTATTGATTTGCCAAGTT 1787
|||||||||||||||||||||| |||||||||||||| |||| |||||||| |||||||
Sbjct 882 CTTGGCTCAAATATTCTCCTCCTTGATCTGATCGAAGAACTTTAATTGATTTCCCAAGTT 823
Query 1788 GATTTTGTACTTCATTCTGGAACTCCTTGAACTTTTCAAAAGATTCCGACTTATGTTTCA 1847
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 822 GATTTTGTACTTCATTCTGGAACTCCTTGAACTTTTCAAAGGATTCCGATTTATGTTTCA 763
Query 1848 TTAGATAAACATAACCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGT 1907
||| ||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||
Sbjct 762 TTACATAAACATAACCATATCTACTAAAGTCATTAGTAAATGTAATGAAATACTGATAGT 703
Query 1908 TTCCTCTGGCGCTTGTACTCATTAGCCCACATACA-T-C-T--GTATGTATAAGGCCCAA 1962
||||||| || |||||||| || ||||||||||| | | | |||||||||| ||||||
Sbjct 702 TTCCTCTAGCATTTGTACTCGTTGGCCCACATACAGTACATCTGTATGTATAAAGCCCAA 643
Query 1963 TAAGTCACTAGCCCTCTCACTGTGCCCAGTAAATGGGGCCTTAGTCATCTTT-CCCAACA 2021
||||||||||||||||||||| || || ||||||||||| |||||||| ||| |||||||
Sbjct 642 TAAGTCACTAGCCCTCTCACTTTGTCCGGTAAATGGGGCTTTAGTCATTTTTTCCCAACA 583
Query 2022 AACAAGATTCACAAGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTAT 2081
||||||||||| | ||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 582 AACAAGATTCATATGTCTCATAAGATTCATAATCAAATGAGTTTAAAATTCCATCACTAT 523
Query 2082 GAAGTTTTTGAATTCGTTTCTCGTTTATATGGCCCAAACGACAATGCCAGAGAAAA-GTT 2140
|||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 522 GAAGCTTTTGAATGCGTTTCTCGTTTATATGGCCCAAACGACAATGCCAGA-AAAACGTT 464
Query 2141 GGATTCAAGTCATTAGACTTAAATCTCTTGGTACGAATGTTATAGACTGGCATGCTTTGG 2200
||||||||| ||||||||||||||||||||||| |||||||||| | |||||||||||||
Sbjct 463 GGATTCAAGCCATTAGACTTAAATCTCTTGGTATGAATGTTATAAATTGGCATGCTTTGG 404
Query 2201 TTTAGAACATAAAGCCCATTCTCTAATGGAGCGCTACCATAAAACATATCATCTCGA 2257
||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 403 TTTAGAACATAGAGCCCATTCTCTAATGGAGCGCTACCATAAAACGTATCATCTCGA 347
Score = 1386 bits (750), Expect = 0.0
Identities = 851/900 (95%), Gaps = 6/900 (1%)
Strand=Plus/Minus
Query 1 CATCTTTATAAATCTAATGCCAATCGCAGCAGTATGACTCTCATGCTTAGGCTGTGGAAG 60
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct 3083 CATCTTTATAAATCTAATGCCAATCGCAGCAATATGACTCTCATGCTTCGGCTGTGGAAG 3024
Query 61 AGGTTTAGTAAACGGATCAGCAACATTTGCA-TCTGTTGGAACTCTGCTAATCTTCACAT 119
||||| |||||| |||||||||||||||||| || ||| ||||||||||||||||||||
Sbjct 3023 AGGTTAAGTAAAAGGATCAGCAACATTTGCATTC-ATTGAAACTCTGCTAATCTTCACAT 2965
Query 120 CACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCT 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2964 CACCTCTATCATTAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCT 2905
Query 180 GGTGTGATCTAGGTTCTTTCGCTTGAGCGATGGCTCCATTGTTATCACAGTAAAGATCGA 239
||||||||||||||| ||| ||||| | ||| | ||||||||||||||||||||||| |
Sbjct 2904 GGTGTGATCTAGGTTTTTTTGCTTGCGTTATGACACCATTGTTATCACAGTAAAGATCAA 2845
Query 240 TGGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAG 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2844 TGGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAG 2785
Query 300 CCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGTAGAATCTGCCACAG 359
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 2784 CCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCTTCAGTTGTAGAGTCTGCCACAG 2725
Query 360 TGCTCTGTTTGGAACTCTTCCAGCTCACTGCTCCTCCGTTGAGACAAAAGACAAATCCTG 419
|||||||||||||||||||||| |||||| |||||||||| |||||||||||||||| ||
Sbjct 2724 TGCTCTGTTTGGAACTCTTCCAACTCACTTCTCCTCCGTTTAGACAAAAGACAAATCGTG 2665
Query 420 ATTGAGATCG-AAAATCATCTTTGTCTGTCTGAAAGCTGGCATCGGTATAACCACTCACA 478
||| ||||| |||| ||||||||||||| |||||||||||||| ||| |||||||||||
Sbjct 2664 ATTTCGATCGGAAAA-CATCTTTGTCTGTTTGAAAGCTGGCATCAGTAGAACCACTCACA 2606
Query 479 ACAAGTTCCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTA 538
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2605 ACAAGTTCCTCACTTCCTCCATAGACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTA 2546
Query 539 AGGATGTTCTTGACTACTATCCAGTGACTTTCACCTGGATCAGACTGGTATCTGCTCGTC 598
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2545 AGGATGGTCTTGACTACTATCCAGTGACTTTCACCTGGATCAGATTGGTATCTGCTCGTC 2486
Query 599 ATGCTCAAAGCACAAACAACATCTGGGCGAGTGCAGAGCATAGCATACATGATAGATCCT 658
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2485 ATGCTCAAAGCACATGCAACATCTGGGCGAGTGCAGAGCATAGCATACATGATAGATCCT 2426
Query 659 ATAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGACAC 718
|||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||
Sbjct 2425 ATAGCAGAAGCATATGAAATCTTACTCATCCGCTCTCGCTCATCATGCGTCGAAGGACAC 2366
Query 719 TGAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCATGC 778
| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct 2365 TAAGTCTTGCTAAGAGTTATACCATGAGACATTG-TATAAAGCCTTTCTTAGAATCATGC 2307
Query 779 ATATTAAACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTTG 838
||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2306 ATATTGAACATGTGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTTG 2247
Query 839 TTCAATCTATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCTCCCAAGTCTTTC 898
|| ||||||||||||||||| ||||| |||||||||||||||||||| |||| |||||||
Sbjct 2246 TTTAATCTATCTCTATAGATTCTTAT-CCAAGAATATAGGCAGCTTCACCCATGTCTTTC 2188
Score = 558 bits (302), Expect = 8e-158
Identities = 334/350 (95%), Gaps = 0/350 (0%)
Strand=Plus/Minus
Query 2283 TCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAACAGAGATGATATTCTTGTTTATAG 2342
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 350 TCGAAAAGTGATGACCTTCCATGTCCAAACATGAAACGGAGATGATATTCTTGTTTATTG 291
Query 2343 CAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGGTAAAGACAACGAAT 2402
|| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 290 CAAGAACATAGTAGCAGTTCTTAACCTCCAAAACCATGCCTGAAGGCAAAGACAACGAAT 231
Query 2403 ATGTTCCCACGGCTAATGCAGAAACTTTTGCTCCATTAGCCACACGTAGGTCCACTTGTC 2462
||||||||||||| |||||||| |||||| ||||||||| ||||||||||||||||||||
Sbjct 230 ATGTTCCCACGGCCAATGCAGAGACTTTTTCTCCATTAGTCACACGTAGGTCCACTTGTC 171
Query 2463 CTTCCTCCAAAGTTCTACTGTTGTTTAGGCCATGCACATTTACACAAATGTGAGCACCAC 2522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 170 CTTCCTCCAAAGTTCTACTGTTGTTTAGGCCATGCACATTTACACAAATGTGAGCACTAC 111
Query 2523 AACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACATTTACTTCTATAACAT 2582
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 110 AACCGGTATCCAATACCCAAGGAGTAAAACCAGAAGTAGTAACATTTACATCTATAACAT 51
Query 2583 AGATACCCGAAGAAGAGACCTTGAATGTTTTCTTCTTCTCCAGATCTTCC 2632
|||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 50 AGATACCCGAAGAAGAAATCTTGAATGTTTTCTTCTTCTCCAGATCTTCC 1
> AT3G32305.1 | Symbols: | transposable element gene | chr3:13253568-13256745
REVERSE LENGTH=3178
Length=3178
Score = 1751 bits (948), Expect = 0.0
Identities = 1083/1149 (94%), Gaps = 6/1149 (1%)
Strand=Plus/Minus
Query 1522 TTTTG-TCGGACATCTGTTTAGCATAAACGCAGACGTCTCTAGAGCATATCCCCAAAAGG 1580
||||| | ||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct 1194 TTTTGAT-GGACATCTGTTGAGCATAAACGCACACGTCTCTAGAGCATATCCCCAAAAGG 1136
Query 1581 ATATTGGAAGATCAGTGTGACTCATCATCGATCGAACCATATCCAATAAAGTTCGATTTC 1640
|| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1135 ATGGTGGAAGATCTGTGTGACTCATCATAGATCGAACCATATCCAATAAAGTTCGATTTC 1076
Query 1641 TCCTTTCGGACACACCATTCCACTATGGTGTTCCTGGAGGAGTGAGCTGTGAAACAATTC 1700
|||||| ||||||| |||||| | ||||||||| |||||||||||||||||||||||||
Sbjct 1075 TCCTTTTAGACACACTATTCCATTGTGGTGTTCCCGGAGGAGTGAGCTGTGAAACAATTC 1016
Query 1701 CACACTCTCTGAGATGATCAATGAAAGCTTGGCTCAAATATTCTCCTCCACGATCTGATC 1760
|||||||||| ||||||| | | ||| ||||||||||||| | |||||||||||||||||
Sbjct 1015 CACACTCTCTAAGATGATTACTAAAAACTTGGCTCAAATAATATCCTCCACGATCTGATC 956
Query 1761 GAAGAGCTTTTATTGATTTGCCAAGTTGATTTTGTACTTCATTCTGGAACTCCTTGAACT 1820
||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 955 GAAGAGCCTTAATTGATTTGCCAAGTTGATTTTGTACTTCATTCTGGAACTCCTTAAACT 896
Query 1821 TTTCAAAAGATTCCGACTTATGTTTCATTAGATAAACATAACCATATCTACTGAAGTCAT 1880
||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct 895 TTTCAAAGGATTCCGATTTATGTTTCATTAGATAAACATAACTATATCTACTGAAGTCAT 836
Query 1881 CAGTAAATGTAATGAAGTACTGATAGTTTCCTCTGGCGCTTGTACTCATTAGCCCACATA 1940
||||||||||||| ||||| |||||||||||||| || |||||||||||| |||||||||
Sbjct 835 CAGTAAATGTAATCAAGTAATGATAGTTTCCTCTAGCACTTGTACTCATTGGCCCACATA 776
Query 1941 CATCTGTATGTATAAGGCCCAATAAGTCACT-AGCCCTCTCACTGTGCCCAGTAAATGGG 1999
|||||||||||| |||||||||||||||| | ||||||||||||||| |||||||| |||
Sbjct 775 CATCTGTATGTACAAGGCCCAATAAGTCA-TCAGCCCTCTCACTGTGTCCAGTAAACGGG 717
Query 2000 GCCTTAGTCATCTTTCCCAACAAACAAGATTCACAAGTCTCATAAGATTCATAATCAAAT 2059
|| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 716 GCTTTAGTCATTTTTCCCAACAAACAAGATTCACATGTCTCATAAGATTCATAATCAAAT 657
Query 2060 GAGTTCAAAAGTCCATCACTATGAAGTTTTTGAATTCGTTTCTCGTTTATATGGCCCAAA 2119
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||
Sbjct 656 GAGTTCAAAAGTCCATCACTATGAAGCTTTTGAATGCGTTTCTCGTTTATATGGCCCGAA 597
Query 2120 CGACAATGCCAGAGAAAAGTTGGATTCAAGTCATTAGACTTAAATCTCTTGGTACGAATG 2179
||||| ||||||||||||||||||||||||||||||||| ||||||| || |||||||||
Sbjct 596 CGACACTGCCAGAGAAAAGTTGGATTCAAGTCATTAGACCTAAATCTTTTTGTACGAATG 537
Query 2180 TTATAGACTGGCATGCTTTGGTTTAGAACATAAAGCCCATTCTCTAATGGAGCGCTACCA 2239
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 536 TTATAGACTGGCATGCTTTGGTTTAGAACATAGAGCCCATTCTCTAATGGAGCGCTACCA 477
Query 2240 TAAAACATATCATCTCGATCAAATGAACAACATTTGTTCTTGATCGAAAAGTGAAAACCT 2299
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 476 TAAAATATATCATCTCGATCAAATGAACAACATTTGTTCTTGATCGAAAAATGAAAACCT 417
Query 2300 TCCATGTCCAAACATGAAACAGAGATGATATTCTTGTTTATAGCAGGAACATAGTAGCAG 2359
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct 416 TCCATGTCCAAACATGAAACGGAGACGATATTCTTGTTTATAGCAGGAACATAGTAGCAG 357
Query 2360 TTCTTAAGCTCCAAAACCATGCCTGAAGGTAAAGACAACGAATATGTTCCCACGGCTAAT 2419
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 356 TTCTTAAGCTCCAAAACCATGCCTGAAGGTAAAGACAACGAATATGTTCCCACGGAAAAT 297
Query 2420 GCAGAAACTTTTGCTCCATTAGCCACACGTAGGTCCACTTGTCCTTCCTCCAAAGTTCTA 2479
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 296 GTAGAGACTTTTGCTCCATTAGCCACACGTAGGTCCACTTGTCCTTCCTCCAAAGTTCTA 237
Query 2480 CTGTTGTTTAGGCCATGCACATTTACACAAATGTGAGCACCACAACCGGTATCCAATACC 2539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 236 TTGTTGTTTAGGCCATGCACATTTACACAAATGTGAGCACCACAACCGGTATCCAATACC 177
Query 2540 CAAGGAGTAGAACCAGAAGTAGTAACATTTACTTCTATAACATAGATACCCGAAGAAGAG 2599
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 176 CAAGGAGTAGAACCAGATGTAGTAACATTTACTTCTATAACATAGATACCCGAAGAAGAT 117
Query 2600 ACCTTGAATGTTTTCTTCTTCTCCAGATCTTCCAAGT-TGTCAAGAGGGTTTGATCCATT 2658
| |||||||||||||||||||||||||||||||||| | ||| || |||||||| ||||
Sbjct 116 ATATTGAATGTTTTCTTCTTCTCCAGATCTTCCAAGTAT-TCAGGAAGGTTTGATTCATT 58
Query 2659 CAATTTGTC 2667
|||||||||
Sbjct 57 CAATTTGTC 49
Score = 1341 bits (726), Expect = 0.0
Identities = 852/911 (94%), Gaps = 15/911 (2%)
Strand=Plus/Minus
Query 1 CATCTTTATAAATCTAATGCCAATCGCAGCAGTATGACTCTCATGCTT-AGGCTGTGGAA 59
|||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||
Sbjct 3178 CATCTTTATAAATCTAATGCCAATCGCAGCAGTATGACTCTCATGCTTCA-GCTGCGGAA 3120
Query 60 GAGGTTTAGTAAACGGATCAGCAACATTTGCATCTGTTGGAACTCTGCTAATCTTCACAT 119
||||| ||||||| |||||||||||||||||||| |||| |||||||||| |||||||||
Sbjct 3119 GAGGTATAGTAAAAGGATCAGCAACATTTGCATCCGTTGAAACTCTGCTAGTCTTCACAT 3060
Query 120 CACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCT 179
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3059 CACCTCTATCAATAATCTCACGAATGAGGTGATATTGCCTTTGTATGTGTTTGGATTTCT 3000
Query 180 GGTGTGATCTAGGTTCTTTCGCTTGAGCGATGGCTCCATTGTTATCACAGTAAAGATCGA 239
||||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||| |
Sbjct 2999 GGTGTGATCTAGGTTCTTTTGCTTGCGCCATGGCACCATTGTTATCACAGTAAAGATCAA 2940
Query 240 TGGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAG 299
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2939 TGGGGTCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAG 2880
Query 300 CCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGTAGAATCTGCCACAG 359
||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||| ||
Sbjct 2879 CCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCTTCAATTGTAGAGTCTGCCATAG 2820
Query 360 TGCTCTGTTTGG---------AA--CTCTTCCAGCTCACTGCTCCTCCGTTGAGACAAAA 408
|||||||||||| || |||||||| |||||||||||| ||||| |||||||
Sbjct 2819 TGCTCTGTTTGGAACTCTTCCAACTCTCTTCCAACTCACTGCTCCTTCGTTGGGACAAAA 2760
Query 409 GACAAATCCTGATTGAGATCGA-AAATCATCTTTGTCTGTCTGAAAGCTGGCATCGGTAT 467
|||||||||||||||||||| | |||||||||||||||||||||| | ||||||| ||||
Sbjct 2759 GACAAATCCTGATTGAGATC-AGAAATCATCTTTGTCTGTCTGAACGATGGCATCAGTAT 2701
Query 468 AACCACTCACAACAAGTTCCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTTC 527
|||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct 2700 AACCACTCACAACAAGTTCCTCTCTTCCTCCATAGACCAAAAACTTATCCTTCGTTCTTC 2641
Query 528 TCAAGTACTTAAGGATGTTCTTGACTACTATCCAGTGACTTTCACCTGGATCAGACTGGT 587
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct 2640 TCAAGTACTTAAGGATGTTCTTGACTACTATCTAGTGACTTTCACCTGGATCAGATTGGT 2581
Query 588 ATCTGCTCGTCATGCTCAAAGCACAAACAACATCTGGGCGAGTGCAGAGCATAGCATACA 647
||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 2580 ATCTGCTCGTCATGCTCAAAGCACATGCAACATCTGGGCGAGTCCAGAGCATAGCATACA 2521
Query 648 TGATAGATCCTATAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGTG 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 2520 TGATAGATCCTATAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCATGCG 2461
Query 708 TCGAAGGACACTGAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCT 767
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2460 TCGAAGGACACTGAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATTAAGCCTTTCT 2401
Query 768 TAGAATCATGCATATTAAACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGTC 827
|||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||
Sbjct 2400 TAGAATCATGCATATTGAACCTGTGCAAGACCTTATCAATATAAGTATCCTGACTTAGTC 2341
Query 828 CAATTATTTTGTTCAATCTATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCTC 887
||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| |
Sbjct 2340 CAATTATTTTGTTTAATCTATCTTTATAGATTCTTATTCCAAGAATATAGGCAGCTTCAC 2281
Query 888 CCAAGTCTTTC 898
|| |||||||
Sbjct 2280 GCATGTCTTTC 2270
Score = 876 bits (474), Expect = 0.0
Identities = 556/595 (93%), Gaps = 7/595 (1%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTCAATGGCTTTTACACCATCAGGTAAATCAACCAA 954
|||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1782 TTTCTTCTTGAATAGCCATTTACACTCTATGGCTTTTACACCATCAGGTAAATCAACCAA 1723
Query 955 AGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTT 1014
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1722 AGTCCATACTTTGTTTTGTGACATGGATTCCATTTCGGATTTCGCGGCCTCTAACCAATT 1663
Query 1015 AACGGAATCGGGGCCCATCAATGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAAT 1074
| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||
Sbjct 1662 ATCGGAATCGGGGCCCATCAGTGCTTCTTCGTATGACGTAGGTTCATGACTTTCTATAAT 1603
Query 1075 CAATAGATCATGATCATCCGTCACCCAATCTCCAAATCTATCGGGTTCGTGACGGTTCCT 1134
|||| | ||||||||||| |||||||||||| ||||||||||||||||||| | ||||
Sbjct 1602 AAATATAGCATGATCATCCATCACCCAATCTCTGAATCTATCGGGTTCGTGACAGCTCCT 1543
Query 1135 TTCGGACCTACGTACCTCAGGTTCCACAGGTATAGGTTCTACGACTCTTCGTAGATCCAA 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1542 TTCGGACCTACGTACCTCAGGTTCCACAGGTATAGGTTCTACGACTCTTCGTAGATCCAA 1483
Query 1195 CTGATGTTCTTCCTGAGAAGTTGGAACATT-CTCATGTGGTTCTCGAACTTCTTCGAGTA 1253
|| |||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct 1482 CTCATGTTCTTCCTGAGAAGTTGGAACATCACCC-TGTGGTTCTCGAACTTCTTCGAGTA 1424
Query 1254 ACACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTC-CATTTCCAAAAAGGCACCATTT 1312
| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 1423 ATACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTCTC-TTTCCAAAAAGGCACCATTT 1365
Query 1313 CGAGCAACAAACACTTTGTTGTCAGT-AGGATGGTAGAAGTAATAACTTTTGGTCTCTTT 1371
|||||||||||||||||||||||| | ||| ||||| |||||||||||||||||||||||
Sbjct 1364 CGAGCAACAAACACTTTGTTGTCAATTAGG-TGGTAAAAGTAATAACTTTTGGTCTCTTT 1306
Query 1372 AGGATAACCTACGAAGTAGCATTTATCAGATTTGGGTCCAAGATTATCAGTAATCAACCG 1431
|||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| ||
Sbjct 1305 CGGATAACCTACGAAGTAGCACTTATCATATTTGGGTCCAAGCTTATCAGTAATCAATCG 1246
Query 1432 TTTGACATAAGCTTCACAACCCCAAATTTTGAGAAAAGATAAATTAGGAACCTTT 1486
| |||||||||||||| ||||| ||||||| |||||||| |||||||||||||||
Sbjct 1245 TCTGACATAAGCTTCAAAACCC-AAATTTTCAGAAAAGACAAATTAGGAACCTTT 1192
> AT3G42182.1 | Symbols: | transposable element gene | chr3:14352785-14356741
REVERSE LENGTH=3957
Length=3957
Score = 1297 bits (702), Expect = 0.0
Identities = 851/923 (92%), Gaps = 10/923 (1%)
Strand=Plus/Minus
Query 1749 CACGATCTGATCGAAGAGCTTTTATTGATTTGCCAAGTTGATTTTGTACTTCATTCTGGA 1808
|||||||| ||||| ||||||| ||||||||||||||||||||||||| |||||| ||||
Sbjct 1795 CACGATCTCATCGACGAGCTTTAATTGATTTGCCAAGTTGATTTTGTATTTCATTTTGGA 1736
Query 1809 ACTCCTTGAACTTTTCAAAAGATTCCGACTTATGTTTCATTA-GATAAACATAACCATAT 1867
||| ||||||||||||||| ||||| || ||| |||||| || |||||||||||||||||
Sbjct 1735 ACT-CTTGAACTTTTCAAAGGATTCAGATTTACGTTTCA-TAGGATAAACATAACCATAT 1678
Query 1868 CTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTTTCCTCTGGCGCTTGTAC-T 1926
|||||||||||||||||||||||||||||||| |||||||||||||| || ||||| | |
Sbjct 1677 CTACTGAAGTCATCAGTAAATGTAATGAAGTATTGATAGTTTCCTCTAGCACTTGT-CGT 1619
Query 1927 CATTAGCCCACATACATCTGTATGTATAAGGCCCAATAAGTCACTAGCCCTCTCACTGTG 1986
|||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1618 CATTGGCCCATATACATCTGTATGTATAAGGCCCAATAAGTCACTAGCCCTTTCACTGTG 1559
Query 1987 CCCAGTAAATGGGGCCTTAGTCATCTTTCCCAACAAACAAGATTCACAAGTCTCATAAGA 2046
|||||||| ||||| |||||||| ||||||||||||||||||||||| || |||||| |
Sbjct 1558 TCCAGTAAACGGGGCTTTAGTCATTTTTCCCAACAAACAAGATTCACATGTTTCATAAAA 1499
Query 2047 TTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGTTTTTGAATTCGTTTCTCGTT 2106
|||||||||| ||||||||||||| ||| ||||||||| |||||||| |||||||||||
Sbjct 1498 TTCATAATCAGTTGAGTTCAAAAGTTCATTACTATGAAGCTTTTGAATGCGTTTCTCGTT 1439
Query 2107 TATATGGCCCAAACGACAATGCCAGAGAAAAGTTGGATTCAAGTCATTAGACTTAAATCT 2166
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1438 TATATGGCCCAAACGACAATGCCAGAGAAACGTTGGATTCAAGTCATTAGACTTAAATCT 1379
Query 2167 CTTGGTACGAATGTTATAGACTGGCATGCTTTGGTTTAGAACATAAAGCCCATTCTCTAA 2226
|||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 1378 CTTGTTACGAATGTTATAGATTGGCATGCTTTGGTTTAGAACATATAGCCCATTCTCTAA 1319
Query 2227 TGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACAACATTTGTTCTTGATCGA 2286
| || ||||||||||||||||||||||||| |||||||||||||||||||| |||||| |
Sbjct 1318 TAGAACGCTACCATAAAACATATCATCTCGCTCAAATGAACAACATTTGTTTTTGATCAA 1259
Query 2287 AAAGTGAAAACCTTCCATGTCCAAACATGAAACAGAGATGATATTCTTGTTTATAGCAGG 2346
||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||| |
Sbjct 1258 AAAGTGAAAACCTTCAA-GTCCAAACATGAAACAGAGATGATATTCTTGTTTAAAGCAAG 1200
Query 2347 AACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGGTAAAGACAACGAATATGT 2406
|||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1199 AACATAGTAGCAGTTCTTGAGCTCCAAAACTATGCCTGAAGGTAAAGACAACGACTATGT 1140
Query 2407 TCCCACGG-CTAATGCAGAAACTTTTGCTCCATTAGCCACACGTAGGTCCACTTGTCCTT 2465
|||||||| | |||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1139 TCCCACGGGC-AATGTAGAGACTTTTGCTCCATTAGCCACACGTAGGTCCACTTGTCCTT 1081
Query 2466 CCTCCAAAGTTCTACTGTTGTTTAGGCCATGCACATTTACACAAATGTGAGCACCACAAC 2525
||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1080 TCTCAAAAGTTCTAGTGTTGTTTAGGCCATGCGCATTTACACAAATGTGAGCACCACAAA 1021
Query 2526 CGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACATTTACTTCTATAACATAGA 2585
|||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 1020 TGGTATCCAATACCCAAGGAGTAGAACCAAAAGTAGTAACATTGACTTCTATAACATAGA 961
Query 2586 TACCCGAAGAAGAGACCTTGAATGTTTTCTTCTTCTCCAGATCTTCCAAGTTGT-CAAGA 2644
||| ||||||| | | |||||| ||||||||||||| ||||||||||||| || || ||
Sbjct 960 TACTCGAAGAATATATATTGAATATTTTCTTCTTCTCTAGATCTTCCAAGT-GTTCAGGA 902
Query 2645 GGGTTTGATCCATTCAATTTGTC 2667
|||||||||| ||||||||||||
Sbjct 901 GGGTTTGATCTATTCAATTTGTC 879
Score = 1096 bits (593), Expect = 0.0
Identities = 755/831 (91%), Gaps = 20/831 (2%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTCAATGGCTTTTACACCATCAGGTAAATCAACCAA 954
|||||||||||||||| |||||||||| ||||||||| ||| ||||||||||||||||||
Sbjct 2609 TTTCTTCTTGAAAATCTATTTACACTCTATGGCTTTT-CACAATCAGGTAAATCAACCAA 2551
Query 955 AGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACC-ACT 1013
|||||||| |||||||||||||||||||||||| ||| ||||||||| |||| |
Sbjct 2550 AGTCCATATTTTGTTTTGTGACATGGATTCCATTTCGTATTTCGCGG-----AACCTGTT 2496
Query 1014 TAACGGAATCGGGGCCCATCAATGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAA 1073
| | |||||| |||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 2495 TTA-GGAATCAGGGCCCATCAGCGCTTCTTCGTATGATGTAGGTTCATCACTCTCTATAA 2437
Query 1074 TCAATAGATCATGATCATCCGTCACCCAATCTCCAAATCTATCGGGTTCGTGACGGTTCC 1133
| |||||||||||||||||| ||| |||||||||||||||||||||||||||| || |||
Sbjct 2436 TAAATAGATCATGATCATCCATCATCCAATCTCCAAATCTATCGGGTTCGTGATGGCTCC 2377
Query 1134 TTTCGGACCTACGTACCTCAGGTTCCACAGGTATAGGTTCTACGACTCTTCGTAGATCCA 1193
||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 2376 TTTTGGACCTACGTACCTCAGGTTCCACAAGTAAAGGTTCTACGACTCTTCGTAGATCCA 2317
Query 1194 ACTGATGTTCTTCCTGAGAAGTTGGAACATTC-TCATGTGGTTCTCGAACTTCTTCGAGT 1252
|||||||||| ||||||||| |||||||| || ||||||||| || |||||||| ||||
Sbjct 2316 ACTGATGTTCATCCTGAGAATTTGGAACA-TCACCATGTGGTTATCAAACTTCTTTGAGT 2258
Query 1253 AACACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTC-CATTTCCAAAAAGGCACCATT 1311
|| ||||||||||||| |||| |||||||||||||||| | |||||||||| ||||||||
Sbjct 2257 AATACTTTACTCCCACAAGTTTCTTTTGAAAGAAACTCTC-TTTCCAAAAAAGCACCATT 2199
Query 1312 TCGAGCAACAAACACTTTGTTGTCAGTAGGATGGTAGAAGTAATAACTTTTGGTCTCTTT 1371
|| ||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||
Sbjct 2198 TCAAGCAACAAACACTTTGTTGTCAGTAGGGTGGTAAAAGTAATAACCTTTGGTCTCTTT 2139
Query 1372 AGGATAACCTACG-AAGTAGCATTTATCAGATTTGGGTCCAAGATTATCAGTAATCAACC 1430
|||||||||||| || || || |||||| ||||||||||||| |||||||||||||| |
Sbjct 2138 CGGATAACCTACGTAA-TAACACTTATCACATTTGGGTCCAAGCTTATCAGTAATCAATC 2080
Query 1431 GTTTGACATAAGCTTCACAACCCCAAATTTTGAGAAAAGATAAATTAGGAACCTTTCCAG 1490
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 2079 GTTTGACATAAGCTTCACAACCCCAAATTTTCAGAAAAGACAAATTAGGAACCTTTCCAG 2020
Query 1491 TCCATATCTCATATGGTGTCTTTTCAACTGATTTTG-TCGGACATCTGTTTAGCATAAAC 1549
|||||||||||||||||||||| ||||||||||||| | ||||||||||| |||||||||
Sbjct 2019 TCCATATCTCATATGGTGTCTTCTCAACTGATTTTGAT-GGACATCTGTTGAGCATAAAC 1961
Query 1550 GCAGACGTCTCTAGAGCATATCCCCAAAAGGATATTGGAAGATCAGTGTGACTCATCATC 1609
| |||||| ||||||||||||||||||||| || |||||||| ||||||||| |||||
Sbjct 1960 GGAGACGTTTCTAGAGCATATCCCCAAAAG-AT---GGAAGATCTGTGTGACTCTTCATC 1905
Query 1610 GATCGAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCACTATGGT 1669
|||||||||||||||||||||||| ||||||||||||| |||||||||||||| | ||||
Sbjct 1904 GATCGAACCATATCCAATAAAGTTTGATTTCTCCTTTCAGACACACCATTCCATTGTGGT 1845
Query 1670 GTTCCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCA 1720
||||| ||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct 1844 GTTCCCGGAGGCGTGAGCTGTGAAACAATTCTACACTCTCTGAGATGATCA 1794
Score = 905 bits (490), Expect = 0.0
Identities = 580/624 (93%), Gaps = 4/624 (1%)
Strand=Plus/Minus
Query 262 CACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAGCCTCCTTAGCCGCTTCAGAAGC 321
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct 3741 CACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAGCCTCCTTACCCGCTTCTGAAGC 3682
Query 322 AGCTATATACTCAGCCTCAGTTGTAGAATCTGCCACAGTGCTCTGTTTGGAACTCTTCCA 381
||||||||||||| | | ||||||||| ||||||||| |||| |||||||||||||||||
Sbjct 3681 AGCTATATACTCAACTTTAGTTGTAGAGTCTGCCACAATGCTTTGTTTGGAACTCTTCCA 3622
Query 382 GCTCACTGCTCCTCCGTTGAGACAAAAGACAAATCCTGATTGAGATCGAAAATCATCTTT 441
|||| ||||||||| |||||||||||||||||||| ||| ||||| |||||||||||
Sbjct 3621 ACTCATTGCTCCTCCTTTGAGACAAAAGACAAATCCAAATTCTGATCGGAAATCATCTTT 3562
Query 442 GTCTGTCTGAAAGCTGGCATCGGTATAACCACTCACAACAAGTTCCTCACTTCCTCCATA 501
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3561 GTCTGTCTGAAAGCTGGCATCAGTATAACCACTCACAACAAGTTCCTCACTTCCTCCATA 3502
Query 502 AACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTAAGGATGTTCTTGACTACTATCCA 561
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3501 GACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTAATGATGTTCTTGACTACTATCCA 3442
Query 562 GTGACTTTCACCTGGATCAGACTGGTATCTGCTCGTCATGCTCAAAGCACAAACAACATC 621
|||||||||||||||| ||| ||||||| | ||||||||||||||||||| |||||||
Sbjct 3441 ATGACTTTCACCTGGATGAGATTGGTATCAGATCGTCATGCTCAAAGCACATGCAACATC 3382
Query 622 TGGGCGAGTGCAGAGCATAGCATACATGATAGATCCTATAGCAGAAGCATATGGAATCTT 681
| ||||| | ||||||| ||||||||||||||||||||| |||||||||||| |||||
Sbjct 3381 TAGGCGA-T---GAGCATAACATACATGATAGATCCTATAGTAGAAGCATATGGTATCTT 3326
Query 682 ACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGACACTGAGTCTTGCTAAGAGTTATGCC 741
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3325 ACTCATCCGCTCTCGCTCATCATGTGTCGAAGGACACTGAGTCTTGCTAAGAGTTATGCC 3266
Query 742 ATGAGACATTGGTATAAAGCCTTTCTTAGAATCATGCATATTAAACCTATGCAAGACCTT 801
||||||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||
Sbjct 3265 ATGAGACATTGGTATAAAGTCTTTCTTAGAATCATGCATATTGAACCTGTGTAAGACCTT 3206
Query 802 ATCTATATAAGTATCTTGACTTAGTCCAATTATTTTGTTCAATCTATCTCTATAGATCCT 861
||||||||||||||| |||||||||| |||||||||||| |||||||||||||| || ||
Sbjct 3205 ATCTATATAAGTATCCTGACTTAGTCTAATTATTTTGTTTAATCTATCTCTATAAATTCT 3146
Query 862 TATTCCAAGAATATAGGCAGCTTC 885
||||||||||||||||||||||||
Sbjct 3145 TATTCCAAGAATATAGGCAGCTTC 3122
Score = 292 bits (158), Expect = 9e-78
Identities = 201/222 (91%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 7 TATAAATCTAATGCCAATCGCAGCAGTATGACTCTCATGCTTAGGCTGTGGAAGAGGTTT 66
||||||||||||||||||| |||||||||| ||||||||||| ||||| |||||||||||
Sbjct 3957 TATAAATCTAATGCCAATCACAGCAGTATGCCTCTCATGCTTCGGCTGCGGAAGAGGTTT 3898
Query 67 AGTAAACGGATCAGCAACATTTGCATCTGTTGGAACTCTGCTAATCTTCACATCACCTCT 126
||||| |||||||||||||| |||| |||| ||||| |||||||||||||||||||||
Sbjct 3897 TGTAAAAAGATCAGCAACATTTTCATCCGTTGAAACTCGGCTAATCTTCACATCACCTCT 3838
Query 127 ATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCTGGTGTGA 186
| || |||||||| ||||||| |||||||||||||||| ||| ||||||||||||||||
Sbjct 3837 ACCAGTAATCTCATGAATGAGATGATATCGCCTTTGTA--TGTATGGATTTCTGGTGTGA 3780
Query 187 TCTAGGTTCTTTCGCTTGAGCGATGGCTCCATTGTTATCACA 228
|||||||||||| ||||| |||||||| ||||||||||||||
Sbjct 3779 TCTAGGTTCTTTTGCTTGCGCGATGGCACCATTGTTATCACA 3738
> AT4G08094.1 | Symbols: | transposable element gene | chr4:4993175-4994696
REVERSE LENGTH=1522
Length=1522
Score = 1275 bits (690), Expect = 0.0
Identities = 827/894 (93%), Gaps = 6/894 (1%)
Strand=Plus/Minus
Query 7 TATAAATCTAATGCCAATCGCAGCAGTATGACTCTCATGCTTAGGCTGTGGAAGAGGTTT 66
|||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||
Sbjct 1522 TATAAATCTAATGCCAATCGCAACAGTATGACTCTCATGCTTTGGCTGTGTAAGAGGTTT 1463
Query 67 AGTAAACGGATCAGCAACATTTGCATCTGTTGGAACTCTGCTAATCTTCACATCACCTCT 126
||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 1462 GGTAAAAGGATCAGCAACATTTGCATCCGTTGAAACTCTGCTAATCTTCACATCACCTCT 1403
Query 127 ATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCTGGTGTGA 186
|||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1402 ATCAATAATCTCACAAATGAGGTGATATCGCCTTTGAATGTGTTTGGAATTCTGGTGTGA 1343
Query 187 TCTAGGTTCTTTCGCTTGAGCGATGGCTCCATTGTTATCACAGTAAAGATCGATGGGGCC 246
|| ||||||||| || || |||||||| ||||||||||||||||||||||| ||||||||
Sbjct 1342 TCCAGGTTCTTTTGCGTGCGCGATGGCACCATTGTTATCACAGTAAAGATCAATGGGGCC 1283
Query 247 AGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAGCCTCCTT 306
||||||||||||||||||| |||||||||||||||||||||| |||||||| | || ||
Sbjct 1282 TGAAATACTAGGAACCACACAAAGTTCAGTAATGAACTTCCTATTCCAAACAACTTCATT 1223
Query 307 AGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGTAGAATCTGCCACAGTGCTCTG 366
| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1222 ACCCGCTTCAGAAGCAGCTATATACTCAGCTTCAGTTGTAGAGTCTGCCACAGTGCTCTG 1163
Query 367 TTTGGAACTCTTCCAGCTCACTGCTCCTCCGTTGAGACAAAAGACAAATCCTGATTGAGA 426
||||||||||||| | ||||||||||||| ||||||||||||||||||||| ||||| ||
Sbjct 1162 TTTGGAACTCTTCTAACTCACTGCTCCTCAGTTGAGACAAAAGACAAATCCCGATTGTGA 1103
Query 427 TCGAAAATCATCTTTGTCTGTCT-GAAAGCTGGCATCGGTATAACCACTCACAACAAGTT 485
||| |||||||||||||| || | ||||| ||||||| |||| |||||||||||||||||
Sbjct 1102 TCGGAAATCATCTTTGTCAGT-TGGAAAGTTGGCATCAGTATTACCACTCACAACAAGTT 1044
Query 486 CCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTAAGGATGT 545
|||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||
Sbjct 1043 CCTCACTTCCTCCATAGACAAAAAACTTATCCTTAGTTCTTCTCAAGTACTTAAAAATGT 984
Query 546 TCTTGACTACTATCCAGTGACTTTCACCTGGATCAGACTGGTATCTGCTCGTCATGCTCA 605
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||
Sbjct 983 TCTTGACTACTATCCAGTGACTTTCACCTGGATCAGATTGGTATTTGCTCGTCATG--CA 926
Query 606 AAGCACAAACAACATCTGGGCGAGTGCAGAGCA-TAGCATACATGATAGATCCTATAGCA 664
||||||| ||||| | |||||||||| || | ||||||||||||||||||||||||||
Sbjct 925 AAGCACATGCAACAGCCAGGCGAGTGCAAAG-ATTAGCATACATGATAGATCCTATAGCA 867
Query 665 GAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGACACTGAGTC 724
|||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||
Sbjct 866 GAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCATGCGTCGAAGGATACTGAGTC 807
Query 725 TTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCATGCATATTA 784
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 806 TTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCATTCATATCG 747
Query 785 AACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTTGTTCAAT 844
||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 746 AACATGTGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTTGTTTAAT 687
Query 845 CTATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCTCCCAAGTCTTTC 898
|||||||||||||| |||||||||||||||| | ||||||| |||| |||||||
Sbjct 686 CTATCTCTATAGATTCTTATTCCAAGAATATTGACAGCTTCACCCATGTCTTTC 633
Score = 169 bits (91), Expect = 2e-40
Identities = 111/121 (92%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTCAATGGCTTTTACACCATCAGGTAAATCAACCAA 954
|||||||||||| || |||||||| || ||||||||||| |||||| |||||||||| ||
Sbjct 123 TTTCTTCTTGAATATACATTTACATTCTATGGCTTTTACGCCATCAAGTAAATCAACAAA 64
Query 955 AGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTT 1014
||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||
Sbjct 63 AGTCCATACTTTGTTTTGTGACATGGATTCCATTTCGGATTTTGCGGCCTCTAAGCACTT 4
Query 1015 A 1015
|
Sbjct 3 A 3
> AT4G07862.1 | Symbols: | transposable element gene | chr4:4688082-4688791
REVERSE LENGTH=710
Length=710
Score = 942 bits (510), Expect = 0.0
Identities = 606/652 (93%), Gaps = 7/652 (1%)
Strand=Plus/Minus
Query 2018 AACAAACAAGATTCACAAGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCA 2077
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 691 AACAAACAAGATGCACATGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCA 632
Query 2078 CTATGAAGTTTTTGAAT-TCGTTTCTCGTTTATATGGCCCAAACGACAATGCCAGAGAAA 2136
|||||||| |||||||| | ||||||| |||||||||||||||||||||||| |||||||
Sbjct 631 CTATGAAGCTTTTGAATGT-GTTTCTCATTTATATGGCCCAAACGACAATGC-AGAGAAA 574
Query 2137 AGTTGGATTCAAGTCATTAGACTTAAATCTCTTGGTACGAATGTTATAGACTGGCATGCT 2196
|||||||||||||| |||| |||||||||||||||| | ||||||||||| |||||||||
Sbjct 573 AGTTGGATTCAAGTGATTAAACTTAAATCTCTTGGTGCAAATGTTATAGATTGGCATGCT 514
Query 2197 TTGGTTTAGAACATAAAGCCCATTCTCTAATGGAGCGCTACCATAAAACATATCATCTCG 2256
||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||| |||
Sbjct 513 TTGGTTTAGAACATAGAGCTCATTCTCTAATGGAGCACTACCATAAAACATATCATTTCG 454
Query 2257 ATCAAATGAACAACATTTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGA 2316
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 453 ATCAAATGAACAACATTTGTTCTTGATCAAAAAGTGAAAACTTTCCATGTCCAAACATGA 394
Query 2317 AACAGAGATGATATTCTTGTTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAAC 2376
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 393 AACGGAGATGATATTCTTGTTTATAGCATGAACATAGTAGCAGTTCTTAAGCTCCAAAAC 334
Query 2377 CATGCCTGAAGGTAAAGACAACGAATATGTTCCCACGGCTAATGCAGAAACTTTTGCTCC 2436
||||| ||||||| ||||||| |||||||| || ||| | |||| ||| ||| |||||||
Sbjct 333 CATGCATGAAGGTTAAGACAAGGAATATGT-CC-ACGACCAATGTAGAGACTCTTGCTCC 276
Query 2437 ATTAGCCACACGTAGGTCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGTTTAGGCCATG 2496
|||||||| ||||||||||||||||| |||||||| |||| |||||||||||| ||||||
Sbjct 275 ATTAGCCATACGTAGGTCCACTTGTCGTTCCTCCATAGTTATACTGTTGTTTACGCCATG 216
Query 2497 CACATTTACACAAATGTGAGCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGA 2556
|| |||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||
Sbjct 215 CATATTTACACAAATGTGAGCACCACAGCCGGTATCCAATTCCCAAGGAGTAAAACCAGA 156
Query 2557 AGTAGTAACATTTACTTCTATAACATAGATACCCGAAGAAGAGACCTTGAATGTTTTCTT 2616
|||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| ||
Sbjct 155 AGTAGTAACATTTACTTCTATAACATAGATACCCGAAGAAGAAATCTTGAACGTTTTATT 96
Query 2617 CTTCTCCAGATCTTCCAAGTTGT-CAAGAGGGTTTGATCCATTCAATTTGTC 2667
|||||||||||||||||||| || |||| |||||||||||||||||||||||
Sbjct 95 CTTCTCCAGATCTTCCAAGT-GTTCAAGGGGGTTTGATCCATTCAATTTGTC 45
> AT4G02317.1 | Symbols: | transposable element gene | chr4:1021318-1021717
REVERSE LENGTH=400
Length=400
Score = 324 bits (175), Expect = 3e-87
Identities = 320/385 (83%), Gaps = 29/385 (8%)
Strand=Plus/Minus
Query 1308 CATTTCGAGCAACAAACACTTTGTTGTCAGTAGGATGGTAGAAGTAATAACTTT-TGGTC 1366
|||||||||||||||||||||||||||||||||||| ||| ||||||||| ||| ||||
Sbjct 362 CATTTCGAGCAACAAACACTTTGTTGTCAGTAGGATAGTAAAAGTAATAA-TTTGTGGTT 304
Query 1367 TCTTTAGGATAACCTACGAAGTAGCATTTATCAGATTTGGGTCCAAGATTATCAGTAATC 1426
|| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 303 TCCTTATGATAACCTATGAAGTAGCATTTATCAGATTTGGGTCCAAGATTATCAGTAATC 244
Query 1427 AACCGTTTGACATAAGCTTCACAACCCCAAATTTTGAGAAAAGATAAATTAGGAACCTTT 1486
|| ||||||||||||| ||||||| |||||||||| |||||||| |||||| ||||||||
Sbjct 243 AATCGTTTGACATAAGATTCACAATCCCAAATTTTCAGAAAAGACAAATTATGAACCTTT 184
Query 1487 CCAGTCCATATCTCATATGGTGTCTTTTCAACTGATTTTGTCGGACATCTGTTTAGCATA 1546
|| | | || | || |||| || || | |||| ||||||||| |
Sbjct 183 ----TC-A-AG-TCG-AC--TGA-TTTT-AA-TG-----G----ACATATGTTTAGCAGA 146
Query 1547 AACGCAGACGTCTCTAGAGCATATCCCCAAAAGGATATTGGAAGATCAGTGTGACTCATC 1606
|||| |||||||||||||| |||||| |||||||||| | ||||||||||| || | |||
Sbjct 145 AACGTAGACGTCTCTAGAGTATATCCTCAAAAGGATAATAGAAGATCAGTGAGATTTATC 86
Query 1607 ATCGATCGAA-CCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCACTA 1665
||| ||| || ||||||||||||||||| |||||||| |||| ||||| |||| | |
Sbjct 85 ATCTATCTAAACCATATCCAATAAAGTTTGATTTCTCTTTTCAGACACT--ATTCTATTG 28
Query 1666 TGGTGTT-CCTGGAGGAGTGAGCTG 1689
||||||| || ||| ||||||||||
Sbjct 27 TGGTGTTTCC-GGAAGAGTGAGCTG 4
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 132440729520
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5