BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg490266 Length=1455 Score E Sequences producing significant alignments: (Bits) Value AT4G02930.1 | Symbols: | GTP binding Elongation factor Tu fami... 2320 0.0 > AT4G02930.1 | Symbols: | GTP binding Elongation factor Tu family protein | chr4:1295409-1298404 REVERSE LENGTH=1757 Length=1757 Score = 2320 bits (1256), Expect = 0.0 Identities = 1390/1456 (95%), Gaps = 4/1456 (0%) Strand=Plus/Plus Query 2 CCTTTCTCTTGTACAAGTCAAAATGGCGTCCGTAGTTCTTCGAAACCCTAGCTCGAAGCG 61 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 29 CCTTTCTCTCGTACAAGTCAAAATGGCGTCCGTTGTTCTTCGAAACCCTAGCTCGAAGCG 88 Query 62 TCTTGTTCCATTCTCTTCCCAGATCTACTCTCGTTGCGGTGCTTCTATTACTTCCTCTTA 121 |||||||||||||||||||||||||||||||| || |||||||| ||||||||||||| Sbjct 89 CCTTGTTCCATTCTCTTCCCAGATCTACTCTCGCTGTGGTGCTTCCGTTACTTCCTCTTA 148 Query 122 CTCGATCTCTCATTCTATCGGTGGAGATGATCTCTCTTCCTCTACCTTCGGAACCTCTTC 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 149 CTCGATCTCTCATTCTATCGGTGGAGATGATCTCTCTTCCTCTACCTTCGGAACCTCCTC 208 Query 182 CTTGTGGAGATCCATGGCCACTTTTACTCGAAATAAACCTCATGTAAATGTTGGAACTAT 241 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 209 CTTCTGGAGATCCATGGCCACTTTTACTCGAAATAAACCTCATGTAAATGTTGGAACTAT 268 Query 242 TGGGCATGTTGATCATGGAAAGACCACTTTAACTGCTGCAATCACAAAGGTTCTTGCTGA 301 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 269 TGGGCATGTTGATCATGGCAAGACCACTTTAACTGCTGCAATCACAAAGGTTCTTGCTGA 328 Query 302 GGAGGGCAAAGCTAAAGCTATTGCCTTTGATGAAATTGATAAAGCTCCTGAAGAGAAGAA 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 329 GGAGGGCAAAGCTAAAGCTATTGCCTTTGATGAAATTGATAAAGCTCCTGAAGAGAAGAA 388 Query 362 GAGAGGAATTACTATTGCCACGGCTCATGTGGAGTATGAAACTGCCAAGCGTCACTATGC 421 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 389 GAGAGGAATTACTATTGCCACGGCTCATGTGGAGTATGAAACTGCAAAGCGTCACTATGC 448 Query 422 TCATGTGGATTGCCCTGGGCACGCTGATTATGTTAAAAATATGATTACTGGAGCGGCACA 481 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || || Sbjct 449 TCATGTGGATTGCCCTGGACACGCAGATTATGTTAAAAATATGATTACTGGAGCTGCGCA 508 Query 482 AATGGATGGTGGAATTCTTGTGGTTTCAGGACCAGATGGACCCATGCCGCAGACGAAGGA 541 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 509 AATGGATGGCGGAATTCTTGTGGTTTCAGGACCAGATGGACCCATGCCGCAGACAAAGGA 568 Query 542 ACATATACTACTGGCTCGCCAGGTTGGTGTTCCATCACTTGTGTGCTTCTTGAACAAAGT 601 |||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 569 ACATATTCTACTTGCACGCCAGGTTGGTGTTCCCTCACTTGTGTGCTTCTTGAACAAAGT 628 Query 602 TGATGTGGTGGATGATCCTGAGCTGTTGGAGCTTGTCGAGATGGAACTACGAGAACTCCT 661 ||||||||||||||| |||||||| |||||||||||||||||||||||||| || ||||| Sbjct 629 TGATGTGGTGGATGACCCTGAGCTCTTGGAGCTTGTCGAGATGGAACTACGTGAGCTCCT 688 Query 662 CAGCTTCTACAAGTTTCCTGGGGATGATATTCCCATCATTCGAGGATCTGCTCTGTCCGC 721 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 689 CAGCTTCTACAAGTTTCCTGGGGATGATATTCCCATCATCCGAGGATCTGCTCTGTCCGC 748 Query 722 ATTACAGGGCACCAATGATGAAATTGGAAGGCAAGCTATATTAAAGCTAATGGATGCTGT 781 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 749 ATTACAGGGCACCAATGATGAAATTGGAAGGCAAGCTATATTAAAGCTGATGGATGCTGT 808 Query 782 TGATGAATACATACCTGACCCTGTTCGCGTGCTTGACAAGGCTTTCTTGATGCCAATTGA 841 ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct 809 TGATGAATATATACCTGACCCTGTTCGCGTCCTTGACAAGCCTTTCTTGATGCCAATTGA 868 Query 842 AGATGTTTTCTCAATTCAAGGACGTGGAACTGTTGCAACCGGTCGTATTGAACAGGGAAC 901 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 869 AGATGTTTTCTCAATTCAAGGACGTGGAACTGTTGCAACCGGTCGTATCGAACAGGGAGT 928 Query 902 CATTAAAGTGGGTGAAGAAGTTGAGATATTGGGTTTACGTGAgggggg-gCTTCCACTGA 960 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 929 CATTAAAGTGGGTGAAGAAGTTGAGATATTGGGTTTACGTGAGGGGGGTG-TTCCACTGA 987 Query 961 AGTCGACTGTAACTGGGGTTGAGATGTTCAAGAAGATTTTGGATAATGGACAGGCTGGTG 1020 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 988 AATCGACTGTAACTGGGGTTGAGATGTTCAAGAAGATTTTGGATAATGGACAGGCTGGTG 1047 Query 1021 ACAATGTAGGACTTCTTCTGCGGGGGCTAAAGAGAGAAGACATTCAGCGTGGAATGGTGA 1080 | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1048 ATAATGTAGGACTTCTTCTGCGTGGGCTAAAGAGAGAAGACATTCAGCGTGGAATGGTGA 1107 Query 1081 TTGCTAAGCCTGGTTCGTGCAAGACGTACAAGAAGTTTGAAGCAGAGATTTACGTGCTCA 1140 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct 1108 TTGCTAAGCCTGGTTCATGCAAGACATACAAGAAGTTTGAAGCAGAGATTTACGTGCTCA 1167 Query 1141 CAAAGGACGAAGGAGGACGTCACACTGCTTTTTTCTCCAACTACAGGCCTCAGTTTTACT 1200 ||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||| Sbjct 1168 CAAAGGATGAAGGTGGACGTCACACTGCATTTTTCTCTAACTACAGGCCTCAGTTTTACT 1227 Query 1201 TGAGGACTGCAGATATCACTGGAAAAGTAGAACTACCTGAGAATGTGAAGATGGTCATGC 1260 |||||||||||||||||||||| ||||| ||| |||| || || ||||||||||| |||| Sbjct 1228 TGAGGACTGCAGATATCACTGGCAAAGTGGAATTACCCGAAAACGTGAAGATGGTTATGC 1287 Query 1261 CCGGTGACAATGTAACTGCAGTTTTTGAGCTAATCATGCCTGTCCCACTCGAAACAGGGC 1320 | ||||||||||| || || ||||| ||| |||||||||||||||||||||||||||| | Sbjct 1288 CTGGTGACAATGTCACAGCTGTTTTCGAGTTAATCATGCCTGTCCCACTCGAAACAGGTC 1347 Query 1321 AAAGATTTGCCTTGAGGGAAGGAGGTAGAACAGTTGGAGCTGGTGTTGTGTCAAAAGTGA 1380 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1348 AAAGATTTGCCTTAAGGGAAGGAGGTAGAACAGTTGGAGCTGGTGTTGTATCAAAAGTGA 1407 Query 1381 TGAGCTAAAGTACTCAAAAGCACATTCTTCTCCTTTGTTCTCTAGGAATCCATCAATTAT 1440 ||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct 1408 TGACCTAAACTACTCAAAAGCACATTCTTCTCCTTCGTTCTCTAGGAATCCATCAATT-T 1466 Query 1441 -GAGAttttttttttt 1455 ||||||||| ||||| Sbjct 1467 CGAGATTTTTCTTTTT 1482 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 71736578805 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5