BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490313
Length=966
Score E
Sequences producing significant alignments: (Bits) Value
AT4G02520.1 | Symbols: ATGSTF2, ATPM24.1, ATPM24, GST2, GSTF2 |... 1465 0.0
AT2G02930.1 | Symbols: ATGSTF3, GST16, GSTF3 | glutathione S-tr... 1341 0.0
> AT4G02520.1 | Symbols: ATGSTF2, ATPM24.1, ATPM24, GST2, GSTF2
| glutathione S-transferase PHI 2 | chr4:1110452-1111660 REVERSE
LENGTH=989
Length=989
Score = 1465 bits (793), Expect = 0.0
Identities = 928/989 (94%), Gaps = 26/989 (3%)
Strand=Plus/Plus
Query 1 TTCTGTATAAATTCCATCACTACTTGTGTCTTATTTCACCACCTTCACCTTCAACATCAA 60
|||||||||||| || ||| |||||||||||||||||| |||||||||||||||||||||
Sbjct 1 TTCTGTATAAATACCTTCATTACTTGTGTCTTATTTCATCACCTTCACCTTCAACATCAA 60
Query 61 ACATCACA---------------TCTC---TTACTCAGTCTTCAAAGAGTTTCTTAGTAA 102
|||||||| |||| || |||||||||||||||||||||||||||
Sbjct 61 ACATCACATTTCTTCCTCTTTTCTCTCTTTTTTCTCAGTCTTCAAAGAGTTTCTTAGTAA 120
Query 103 -CCAAATCAATGGCAGGTATCAAAGTTTTCGGACACCCAGCTTCCATTGCCACCAGGAGA 161
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CCCAAATCAATGGCAGGTATCAAAGTTTTCGGACACCCAGCTTCCATTGCCACCAGGAGA 180
Query 162 GTCCTCATCGCCCTCCACGAGAAGAACCTCGACTTTGAGCTCGTTCATATCGAACTCAAA 221
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 181 GTCCTCATCGCCCTCCACGAGAAAAACCTCGACTTTGAGCTCGTTCATGTCGAACTCAAA 240
Query 222 GACGGTGAGCACAAGAAGGAGCCTTTCCTCTCCCGCAACCCTTTTGGACAAGTTCCAGCC 281
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 241 GACGGTGAGCACAAGAAGGAGCCTTTCCTCTCCCGCAACCCTTTTGGTCAGGTTCCAGCC 300
Query 282 TTTGAAGATGGAGACGTCAAGCTCTTCGAATCAAGAGCGATTACTCAGTACATAGCTCAC 341
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TTTGAAGATGGAGACCTCAAGCTCTTCGAATCAAGAGCGATTACTCAGTACATAGCTCAC 360
Query 342 CAG-TATGAAAACCAAGGAACCAACCTTCTCCAAGCCGACTCCAAGAACATATCTCAGTA 400
| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 361 C-GATATGAAAACCAAGGAACCAACCTTCTCCAAACCGACTCCAAGAACATATCTCAGTA 419
Query 401 CGCAATCATGGCCATTGGAATGCAAGTAGAAGCTCATCAGTTCGACCCAGTGGCTTCAAA 460
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 420 CGCAATCATGGCCATTGGAATGCAAGTAGAAGATCACCAGTTCGACCCAGTGGCTTCAAA 479
Query 461 GCTTGCTTGGGAACAATTATTCAAGTCCATCTACGGCTTGACCACAGACCAAGCCGTTGT 520
|||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 480 GCTTGCTTTTGAACAAATATTCAAGTCCATCTACGGCTTGACCACAGACGAAGCCGTTGT 539
Query 521 TGCAGAAGAAGAAGCTAAGTTAGCCAAGGTCCTTGATGTCTACGAGGCTAGGTTGAAGGA 580
||||||||| || ||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 540 TGCAGAAGAGGAGGCTAAGTTAGCCAAGGTCCTTGATGTCTACGAGGCTAGGCTCAAGGA 599
Query 581 GTTCAAGTACTTGGCTGGTGACACTTTCACTTTGACTGATCTTCACCACATTCCCGCGAT 640
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 600 GTTCAAGTATTTGGCTGGTGAAACTTTCACTTTGACTGATCTTCACCACATTCCCGCGAT 659
Query 641 TCAATACCTGCTCGGAACTCCCACCAAGAAGCTCTTCACCGAGCGTCCACGTGTCAACGA 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 660 TCAATACCTGCTCGGAACTCCCACCAAGAAGCTCTTCACCGAGCGTCCACGTGTCAATGA 719
Query 701 GTGGGTGGCTGAGATCACCAAGAGGCCAGCTTCAGAGAAGGTTCTGTGAGAAATTTCTAA 760
|||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 720 GTGGGTGGCTGAAATCACCAAGAGGCCAGCTTCCGAGAAGGTTCAGTGAGAAATTTCTAA 779
Query 761 AAGGAAAAAATGGTTTTGCTTCAGTCACAGTAATAATGCTTAA-ATTAAATAAGCGGCTA 819
|||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 780 AAGGAAAATATGGTTTTGCTTCAGTCACAGTAATAATGCT-AAGATTAAATAAGCGGCTT 838
Query 820 CCTCATTGCCCAATTTCTCAGTATTTTCTTTCTGTTGTATCCTCTGTTTTTGTTTCAGTT 879
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 839 TCTCATTGCCCAATTTCTCAGTACTTTCTTTCTGTTGTATCCTCTGTTTTC-TTTCAGTT 897
Query 880 ATGTGAGTGTGTGT--ATGTTCTTGAGAGTATCTTTGGCAAAAACTATTTATATAATCTT 937
|||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 898 ATGTGAGTGTGTGTGTATGCTCTTGAGAGTATCTTTGGCAAAAACTATTTATCTAATCTT 957
Query 938 CAAGCTCTTCTAAAATAAATCAATTAGTT 966
|||||| ||||||||||||||||||||||
Sbjct 958 CAAGCTATTCTAAAATAAATCAATTAGTT 986
> AT2G02930.1 | Symbols: ATGSTF3, GST16, GSTF3 | glutathione S-transferase
F3 | chr2:851164-852222 REVERSE LENGTH=939
Length=939
Score = 1341 bits (726), Expect = 0.0
Identities = 868/932 (93%), Gaps = 27/932 (3%)
Strand=Plus/Plus
Query 21 TACTTGTGTCTTATTTCACCACCTTCACCTTCAACATCAAACATCACA------TCTC-- 72
||||||||| |||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 10 TACTTGTGTGTTATTTCATCACCTTCACCTTCAACATCAAACATCACATCTCTTTCTCTT 69
Query 73 TTA---------CTCAGTCTTCAAAGAGTTTCTTAGTAACCAAATCAATGGCAGGTATCA 123
||| ||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 70 TTATCTCTTTTTCTCGGTCTTCAAAGAGTTTCTTAGTTACCAAATCAATGGCAGGTATCA 129
Query 124 AAGTTTTCGGACACCCAGCTTCCA-TTGCCACCAGGAGAGTCCTCATCGCCCTCCACGAG 182
|||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||
Sbjct 130 AAGTTTTCGGACACCCAGCTTCCACTT-CCACCAGGAGAGTCCTCATCGCCCTCCATGAG 188
Query 183 AAGAACCTCGACTTTGAGCTCGTTCATATCGAACTCAAAGACGGTGAGCACAAGAAGGAG 242
|| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 189 AAAAACCTCGACTTTGAGCTCGTTCATGTTGAACTCAAAGACGGTGAGCACAAGAAGGAG 248
Query 243 CCTTTCCTCTCCCGCAACCCTTTTGGACAAGTTCCAGCCTTTGAAGATGGAGACGTCAAG 302
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 249 CCTTTCCTCTCCCGCAACCCTTTTGGTCAAGTTCCAGCCTTTGAAGATGGAGACCTCAAG 308
Query 303 CTCTTCGAATCAAGAGCGATTACTCAGTACATAGCTCACCAG-TATGAAAACCAAGGAAC 361
|||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||
Sbjct 309 CTCTTCGAATCAAGAGCGATTACTCAGTACATAGCTCACC-GATACGAAAACCAAGGAAC 367
Query 362 CAACCTTCTCCAAGCCGACTCCAAGAACATATCTCAGTACGCAATCATGGCCATTGGAAT 421
||||||||||| ||| ||||||||||||||| ||||||| ||||||||| ||||||||||
Sbjct 368 CAACCTTCTCCCAGCTGACTCCAAGAACATAGCTCAGTATGCAATCATGTCCATTGGAAT 427
Query 422 GCAAGTAGAAGCTCATCAGTTCGA-CCCAGTGGCTTCAAAGCTTGCTTGGGAACAATTAT 480
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||
Sbjct 428 ACAAGTAGAAGCTCATCAGTTCGATCCC-GTGGCTTCAAAGCTTGCTTGGGAACAAGTAT 486
Query 481 TCAAGTCCATCTACGGCTTGACCACAGACCAAGCCGTTGTTGCAGAAGAAGAAGCTAAGT 540
|||||| || ||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 487 TCAAGTTCAACTATGGCTTGAACACAGACCAAGCCGTTGTTGCAGAAGAAGAAGCTAAGT 546
Query 541 TAGCCAAGGTCCTTGATGTCTACGAGGCTAGGTTGAAGGAGTTCAAGTACTTGGCTGGTG 600
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 547 TAGCCAAGGTCCTTGATGTCTACGAGGCTAGGCTGAAGGAGTTCAAGTATTTGGCTGGTG 606
Query 601 ACACTTTCACTTTGACTGATCTTCACCACATTCCCGCGATTCAATACCTGCTCGGAACTC 660
| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 607 AAACTTTCACTTTGACCGATCTTCACCACATTCCCGTGATTCAATACCTGCTCGGAACTC 666
Query 661 CCACCAAGAAGCTCTTCACCGAGCGTCCACGTGTCAACGAGTGGGTGGCTGAGATCACCA 720
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCACCAAGAAGCTCTTCACGGAGCGTCCACGTGTCAACGAGTGGGTGGCTGAGATCACCA 726
Query 721 AGAGGCCAGCTTCAGAGAAGGTTCTGTGAGAAATTTCTAAAAGGAAAAAA-TGGTTTTGC 779
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct 727 AGAGGCCAGCTTCAGAGAAGGTTCTGTGAGAAATTTCTAAAAGGACAAAAGTGGTTTTGC 786
Query 780 TTCAGTCACAGTAATAATGCTTA-AATTAAATAAGCGGCTACCTCATTGCCCAATTTCTC 838
||||||||||||||||||||| | || |||||||||| || |||||||||||| ||||||
Sbjct 787 TTCAGTCACAGTAATAATGCT-ACAAGTAAATAAGCGTCTGCCTCATTGCCCAGTTTCTC 845
Query 839 AGTATTTTCTTTCTGTTGTATCCTCTGTTTTTGTTTCAG-TTATGTGAGTGTGTGTATGT 897
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 846 AGTACTTTCTTTCTGTTGTATCCTCTGTTTTTGTTTCAGCTTATGTGAGTGTGTGTACGT 905
Query 898 TCTTGAGAGTATCTTTGGCAAAAACTATTTAT 929
||||||||||||||| |||||||||||| |||
Sbjct 906 TCTTGAGAGTATCTTAGGCAAAAACTATATAT 937
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 47270332327
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5