BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490329
Length=2720
Score E
Sequences producing significant alignments: (Bits) Value
AT4G02400.1 | Symbols: | U3 ribonucleoprotein (Utp) family pro... 2852 0.0
AT5G08600.2 | Symbols: | U3 ribonucleoprotein (Utp) family pro... 1360 0.0
AT4G02405.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 185 2e-45
> AT4G02400.1 | Symbols: | U3 ribonucleoprotein (Utp) family protein
| chr4:1054199-1057998 FORWARD LENGTH=2726
Length=2726
Score = 2852 bits (1544), Expect = 0.0
Identities = 1705/1783 (96%), Gaps = 9/1783 (1%)
Strand=Plus/Plus
Query 943 GTGTCAATGGAAGACCACATCAAGTACCGTGACCACATTGCCAAGATGCGGAGCCTGCTC 1002
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 924 GTGTCGATGGAAGACCACATCAAGTACCGTGACCACATTGCCAAGATGCGGAGCCTGCTA 983
Query 1003 TTCCGCCATGAACTGAAAAGTAAACGTATCAAGAAGATTAAGTCTAAAACTTATCATCGC 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 984 TTCCGCCATGAACTGAAAAGTAAACGTATCAAGAAGATTAAGTCTAAAACTTATCATCGC 1043
Query 1063 CTTAAAGGCAAAGACCTGAAGAAATCGGCCATGGGAGCATTTATGGACCCAGAAATGGCT 1122
|||||||| || |||||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct 1044 CTTAAAGGGAAGGACCTGAAGAAATCAGCGATGGGAGCATTAATGGACCCAGAAATGGCT 1103
Query 1123 AAAGAAGAGGCTATTAAGCAGGAGACTAGACGAGTAGAGGAACGGATGACGTTGAAGCAC 1182
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1104 AAAGAAGAGGCTATTAAGCAGGAGACTAGACGAGTAGAGGAACGGATGACTTTGAAGCAC 1163
Query 1183 AAAAACACCGGAAAATGGGCCAAACGCATGTTAAGCCGTGGACTGAATGAGAGATATGAT 1242
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1164 AAAAACACAGGAAAATGGGCCAAACGCATGTTAAGCCGTGGACTGACTGAGAGATATGAT 1223
Query 1243 GGAACTCGGGCAGCTATATCTGAACAACTTCAGATTAATGCCACTTTGTCAAGAAAGATG 1302
|||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1224 GGAACTAGGGCAGCTATATCTGAACAACTTCAGATTAATGCTACTTTGTCCAGAAAGATG 1283
Query 1303 AACTCCACGAACGATGGAAGTAGCAGTGATGAGAGCGACGATGAGGAAGAGTTGAGTTGT 1362
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1284 AACTCCACGAACGATGGAAGTAGTAGTGATGAGAGCGACGATGAGGAAGAGTTGAGTTGT 1343
Query 1363 GGTTCAGATCTGGATACTCCTTCTAAATTGATAGCAAAAGCCAGGGAGAAGACACTGAAA 1422
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1344 GGTTCAGATCAGGATACTCCTTCTAAATTGATAGCGAAAGCCAGGGAGAAGACACTGAAA 1403
Query 1423 ACTGTGGAAGATGATGAAGTACCCAATTCTGGTCTTCTTTCATTACCTTTCATGGCTCGT 1482
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1404 ACTATGGAAGATGATGATGTACCCAATTCTGGTCTTCTTTCATTACCTTTCATGGCTCGT 1463
Query 1483 GCTATGAAAAAGAAAAACGAGGAAGTTAATGAAGAAGCTAAACGTGCATTTGAGGAGTAT 1542
||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct 1464 GCTATGAAAAAGAAAAATGAGGAAGCTAATGAAGAAGCTAAACGTGCATTTGGGGAGTAT 1523
Query 1543 GAAGAGTTGGAGAATTCTGGTGGAGCAGAAAATCCTAGAAAATCCGCTGATGTTAGTGGT 1602
|||| |||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||
Sbjct 1524 AAAGAATTGGAGAATTTTGGTGGAGAAGATAATCCTAAAAAATCCGCTGATGTTAGTGGT 1583
Query 1603 AGAAGAGTATTTGGTGCCACCTCTAAAGTCGAAGCTCCAAAAGAGTCTAAAAAGGACTCG 1662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1584 AGAAGAGTATTTGGTGCCACCTCTAAAGTCGAAGCTCCAAAAGAGTCTAAAAAGGACTCG 1643
Query 1663 GACAACTTTTATGACAACAGTGATAGTGAAAATGATATGGAAGGCATAGAAAATAATGAC 1722
||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1644 GACAATTTTTATGACAACAGTGATAGTGACAATGATATGGAAGGTATAGAAAATAATGAC 1703
Query 1723 CTTGTGGG-TATTGGAGATACTGCTTCACCTGCTAGAAACACTGGAGCCATAACAGAGGC 1781
|||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1704 CTTG-GGGCTGTTGGAGATACTGCTTCACCTGCTAGAAACACTGGAGCCATAACAGAGAC 1762
Query 1782 TGAGAAG-CTCGATGATGATGTTGAAAATCCAGCTTCTAAGACAACATTTGATGTTGCCT 1840
|||||| | | || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1763 CGAGAAGTGTTG-TGGTGATGTTGAAAATCCAGCTTCTAAGACAACATTTGATGTTGCCT 1821
Query 1841 TATTTGCGTCAGGCTCTTGGAAGAAGATGAAAGGCTGCCAAAATGCAGAATCCAAAAAAC 1900
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1822 TATTTGCGTCAGGCTCTTGGAAGAAGATGAAAGGCTCCCAAAATGCAGAATCCAAAAAAG 1881
Query 1901 CTCCAAAGACACATAAACCAATTTCAAAGGGCCAAGATAAAAAGGAATCGAGAGATGAAG 1960
|||||||||| | | |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1882 CTCCAAAGACTCGTGTACCAATCTCAAAGGGCCAAGATAAAAAGGAATCGAGAGATGAAG 1941
Query 1961 AAAGTGAAGATTCCGAGAGTGAAGCAGAGCAAATGGTTGATGGGATTTTGACATCTGCTT 2020
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1942 AAAGTGAAGATTCAGAGAGTGAAGCTGAGCAAATGGTTGATGGGATTTTGACATCTGCTT 2001
Query 2021 CAAAGGAAACCTATGAAATTCCTTCTCAAGCAGAGCTTATACAACGTGCTTTTGCTGGTG 2080
| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2002 CGAAGGAGACCTATGAAATCCCTTCTCAAGCAGAGCTTATACAACGTGCTTTTGCTGGTG 2061
Query 2081 ATGACGTTGTTGATGAATTTGAGAAGGATAAACAAGAGGTTCTAAATCAGGAAGTTCCTG 2140
|||||||||| || ||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 2062 ATGACGTTGTAGAAGAATTTGAGAAGGATAAGCAAGAAGTTCTAAATCAGGAAGTTCCTG 2121
Query 2141 AACCGGAAAAACCAGTTCTAGTTCCTGGTTGGGGACAATGGACCAATATCC-AAAGAAAG 2199
|||||||||| || ||||||||||||||||||||||||||||||||| ||| |||| |||
Sbjct 2122 AACCGGAAAAGCCGGTTCTAGTTCCTGGTTGGGGACAATGGACCAATGTCCAAAAG-AAG 2180
Query 2200 AGAGGTTTACCTTCATGGATGGTTAGAGAACATGAAGATGCAAAGAAAAAGAGAAAGCTA 2259
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2181 AGAGGTTTACCTTCATGGATGGTTAGAGAACATGAAGATGCAAATAAAAAGAGAAAGCTA 2240
Query 2260 GATCTCAAAACAAGGAAAGACTATCGTCTCAGAAATGTTATCATATCAGAAAAAGCCGAT 2319
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 2241 GATCTCAAAACAAGGAAAGACTATCGTCTCAGAAATGTTATCATATCAGAGAAAGTCGAT 2300
Query 2320 AAAAAGGCTGACAAACTTCATACGACGACTCTACCTTTCCCATATACATCTAAGGAAGTT 2379
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2301 AAAAAGGCTGACAAACTTCATACAACGACTCTACCTTTCCCATATACATCTAAGGAAGTT 2360
Query 2380 TTCGAACACAGCATGCGCATGCCTATAGGACCCGAGTTTAATCCTGCGACTATTGTTGGA 2439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2361 TTCGAACACAGCATGCGCATGCCTATAGGACCCGAGTTTAATCCTGCGACTATTGTTGGA 2420
Query 2440 GCTCTAAACCGACCAGAGGTTGTGAAGAAAGCTGGTGTGATAATTAAACCGGTCAAATTT 2499
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2421 GCTCTCAACCGACCCGAGGTTGTGAAGAAAGCTGGTGTGATAATTAAACCGGTCAAATTT 2480
Query 2500 GAGGAAGTGAATCCAAACGAGAAAGTTGATGATGAAAACCCTCGAAGCCATcaaaaacaa 2559
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 2481 GAGGAAGTGAATCCAAACGAGAAAGCAGATGACGAAAACCCTCGAAGCCATCAAAAACAA 2540
Query 2560 agacccaaaaagggtagtaaaaccagtaaaggtcaaagcaaaatcaagtccaagCTAAAG 2619
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 2541 AGACCCAAAAAGGGTAGTAAAACCAGTAAAGGTCAAGGCAAAAACAAGTCCAAGCTAAAG 2600
Query 2620 ACTAAAGCTTAGCTCCCAAGATTTTTGTATTCTCAAA-CTTGTTTAGACACAAATTTTGA 2678
|| |||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 2601 ACCAAAGCTTAGCTCTCAAGATTTCTGTATTCTCAAAACTTGTTTAGACACAAATTTTGA 2660
Query 2679 TCCGAAAAGAAAA-AGTTTTGCTTTGTAATTTGTCTTATTTAT 2720
||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 2661 TCC-AAAAGAAAACAGTTTTGCTTTGTAATTTGTCTTATTTAT 2702
Score = 1273 bits (689), Expect = 0.0
Identities = 838/908 (92%), Gaps = 17/908 (2%)
Strand=Plus/Plus
Query 1 CaaaaaaaaaaCAAGGCAGAGGCAGCCATGGGAGAAAAGAGGAGATCTAGTTCGAAAACC 60
||||||||||| || |||||||||||||||||||||||||| | ||||| ||||||||||
Sbjct 18 CAAAAAAAAAAAAAAGCAGAGGCAGCCATGGGAGAAAAGAGAAAATCTACTTCGAAAACC 77
Query 61 CTAGCTAAGAACAAGAAGAGGCAAGGTCCTCATTTACCTAATTCGATACTCAAGACTATT 120
||||||||||||||||||||| ||||||||||||| |||||||| || || |||||||||
Sbjct 78 CTAGCTAAGAACAAGAAGAGGAAAGGTCCTCATTTGCCTAATTCAATCCTGAAGACTATT 137
Query 121 GCCAATGAGAAACGTCCTTTGAACTCCGACGAAGAAGACGATGAGATCCATTCCGATGGT 180
|||||||||||||||||||||||||| |||||||| |||||||||||| ||||||| | |
Sbjct 138 GCCAATGAGAAACGTCCTTTGAACTCTGACGAAGATGACGATGAGATCGATTCCGACGAT 197
Query 181 GAGAACGTCGATATGTATGAGTACGAAGAAGGTGAGCCTGAGGAAGAGTCCAAGAAAAAC 240
|| ||||||||| |||||||||| |||||||||| ||||||||||||||| |||||||||
Sbjct 198 GAAAACGTCGATTTGTATGAGTATGAAGAAGGTGTGCCTGAGGAAGAGTCTAAGAAAAAC 257
Query 241 AATCGCTATGACCGTGTCGATAACTACGAATACGAGCTTCCCGAGGATTTC--------- 291
|||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 258 AATCGCTATGACCGCGTCGATAACTACGACTACGAGCTTCCCGAGGATTTCGAGGATGAA 317
Query 292 ------GAGTCAGATGATGATGAAGATGGTGGTAACAGCGACAATGAGGATGGTGAAGGT 345
|||||||||||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct 318 AATGTGGAGTCAGATGATGATGAAGATGGTGGAAACAGCGAGAATGAGGAAGGTGAAGGT 377
Query 346 GATGATGATAGACACACTCGTATGTTGCAAGATCTCACTGGAATGCCAAGTGCAGCCTTT 405
||||| ||||||||||| || |||||||||| ||||||||||||||||||||| ||||||
Sbjct 378 GATGACGATAGACACACACGGATGTTGCAAGGTCTCACTGGAATGCCAAGTGCTGCCTTT 437
Query 406 CAAGGAGAGAGTAAG-AGAAGACCTGTACTCTTTACTGAAGCGTATCCAGAGTCTGAATT 464
|||| |||||||||| || ||||||||||||| |||||||||||||||||||||||||||
Sbjct 438 CAAGAAGAGAGTAAGAAG-AGACCTGTACTCTATACTGAAGCGTATCCAGAGTCTGAATT 496
Query 465 CAATCCTACCCGTGATGTTCTGGAGGGTAAAGGCCTCATTTCAGTTGAGGACCTTTTGGC 524
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 497 CAATCCTACCCGTGATGTTCTGGAGGGTAAAGGCCTCATCTCAGTTGAGGACCTTTTGGC 556
Query 525 GCCTCTTGAAGGAAAACCTGGGTTTAATGATCTTAAGAAGAGGATCAACCGGATGCAGAA 584
||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct 557 GCCTCTTGAAGGAAAACCTGGGTTTAACGATCTAAATAAGAGGATCAACCGGATGCAGAA 616
Query 585 AGATACTCAGTCTGTTGTTCATGCTCCTCTGCCAAAGCCAGAACGAGAAAGACTGGAACG 644
|||||||||||||||||||||||| ||| |||| |||||||||||||||||||| || ||
Sbjct 617 AGATACTCAGTCTGTTGTTCATGCACCTTTGCCTAAGCCAGAACGAGAAAGACTAGAGCG 676
Query 645 GAAAGCTGTGAAAGGACTAGTTGAGAAAGAGTTTAATAAGTGGGTGCATCTGGTCAAGAG 704
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 677 GAAAGCTGTGAAAGGACTAGTTGAGAAGGACTTTAATAAGTGGGTGCATCTGGTCAAGAG 736
Query 705 GAATAGGGAGGCACCAACTGTTTACTTCAACCAAACTGTCAGTGTTGGCTACTCTACAGT 764
||||||||||||||||||||||||||| || ||| |||||| |||||| || ||||||||
Sbjct 737 GAATAGGGAGGCACCAACTGTTTACTTTAATCAACCTGTCAATGTTGGGTATTCTACAGT 796
Query 765 TGGCGCAATAGCATCAGAGTTTCAACCCAGGACTGAATTTGAGAAGAAAATGGCTTCTGT 824
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 797 CGGTGCAATAGCATCAGAGTTTCAACCCAGGACTGAATTTGAGAAGAAAATGGCTTCTGT 856
Query 825 ACTCAATGATAACGAGCTTGGGGAGGCTCACAAAGAAGATGGCGCTAAGCTTCTTGAATT 884
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 857 ACTCAAAGATAACGAGCTTGGGGAGGCTCACAAAGAAGATGGCGCTAAGCTTCTTGAATT 916
Query 885 GAACGAGG 892
||| ||||
Sbjct 917 GAATGAGG 924
> AT5G08600.2 | Symbols: | U3 ribonucleoprotein (Utp) family protein
| chr5:2786187-2790241 FORWARD LENGTH=2821
Length=2821
Score = 1360 bits (736), Expect = 0.0
Identities = 1335/1610 (83%), Gaps = 98/1610 (6%)
Strand=Plus/Plus
Query 949 ATGGAAGACCACATCAAGTA-CCGTGACCACATTGCCAAGATGCGGAGCCTGCTCTTCCG 1007
|||||||| ||||||||| | ||| |||| |||| |||||||||||| ||||||||||
Sbjct 1021 ATGGAAGATCACATCAAG-AGACGTAACCATGTTGCTAAGATGCGGAGCATGCTCTTCCG 1079
Query 1008 CCATGAACTGAAA-AGTAAACGTATCAAGAAGATTAAGTCTAAAACTTATCATCGCCTTA 1066
||| |||||| | |||||| |||||| |||||||||||||||| |||||||||||||
Sbjct 1080 AGTTGACCTGAAACA-TAAACGAATCAAGCAGATTAAGTCTAAAACATATCATCGCCTTA 1138
Query 1067 AAGGCAAAGACCTGAAGAAATCGGCCATGGGAGCATTTATGGACCCAGAAATGGCTAAAG 1126
|| |||||||||||| |||||| | |||||||| ||||| |||| |||||||||||
Sbjct 1139 AAAACAAAGACCTGAATCAATCGGGTGTTGGAGCATTCATGGAGCCAGCAATGGCTAAAG 1198
Query 1127 AAGAGGCTATTAAGCAGGAGACTAGACGAGTAGAGGAACGGATGACGTTGAAGCACAAAA 1186
||||||||| ||||||||| | || |||||| ||||||| ||||| || ||||||||||
Sbjct 1199 AAGAGGCTAAGAAGCAGGAGGCGAGGCGAGTAAAGGAACGTATGACTTTAAAGCACAAAA 1258
Query 1187 ACACCGGAAAATGGGCCAAACGCATGTTAAGCCGTGGACTGAATGA-GAGATATGATG-G 1244
|||| ||| ||||||||||||||||| ||||||||||||||||| | || ||| |||| |
Sbjct 1259 ACACAGGACAATGGGCCAAACGCATGCTAAGCCGTGGACTGAAT-AGGAAATACGATGTG 1317
Query 1245 AACTCGGGCAGCTATATCTGAACAACTTCAGATTAATGCCACTTTGTCAAGAAAGATGAA 1304
|||| ||||||| ||||| |||||||||| ||| |||| |||||||| |||||||||||
Sbjct 1318 -ACTCAGGCAGCTCTATCTAAACAACTTCAAATTCATGCTACTTTGTCCAGAAAGATGAA 1376
Query 1305 CTCCACGAACGATGGAAGTAGCAGTGATGAGAGCGACGATGAGGAAGAGTTGAGTTGTGG 1364
|||||| || |||| |||||| |||||| ||| || ||| | | | ||| |||
Sbjct 1377 CTCCACAAAAGATGAAAGTAGTAGTGAT--GAG-GAAGAT-TTG-A-A--TGA----TGG 1424
Query 1365 TTCAGATCTGGATACTCCTTCTAAATTGATAGCAAAAGCCAGGGAGAAGACACTGAAAAC 1424
|||||||| ||||| |||||||| ||||||| |||| | |||||||| |||||||||
Sbjct 1425 TTCAGATCAGGATA---CTTCTAAACTGATAGCGGAAGCAAAGGAGAAGATACTGAAAAC 1481
Query 1425 TGTGGAAGATGATGAAGTACCCAATTCTGGTCTTCTTTCATTACCTTTCATGGCTCGTGC 1484
|||||| ||||||||||| |||| |||| ||||| | |||||||||||||||||||||||
Sbjct 1482 TGTGGACGATGATGAAGTCCCCATTTCTCGTCTTATGTCATTACCTTTCATGGCTCGTGC 1541
Query 1485 TATGAAAAAGAAAAACGAGGAAGTTAATGAAGAAGCTAAACGTGCAT-TTGAGGAGTATG 1543
| ||||||||||||||||||||| ||| ||||||| |||||||| || ||||||||| ||
Sbjct 1542 TGTGAAAAAGAAAAACGAGGAAGCTAAAGAAGAAGGTAAACGTG-ATATTGAGGAGT-TG 1599
Query 1544 AAGAGTTGGAGAATTCTGGTGGAGCAGAAAATC-CTAGAAAA-TCCGCTGATGTTAG-TG 1600
|| || |||| ||||||||||| ||| | ||| |||| ||| || ||||| | ||
Sbjct 1600 --GA----GA-AATT-TGGTGGAGCAG-AAACCTCTA-AAAAGTCCACTAATGTT-GTTG 1648
Query 1601 GTAGAAGAGTATTTGGTGCCACCTCTAAAGTCGAAGCTCCAAAAGAGTCTAAAAAGGACT 1660
|||||||||||||||||| | | |||||||||||||||||| ||||||| |
Sbjct 1649 GTAGAAGAGTATTTGGTG------C---A---GAAGCTCCAAAAGAGTCTGAAAAGGAAT 1696
Query 1661 CGGACAA-CTTTTATGACAACAGTG--A-TAGTGAAAATGATATGGAAGGCATAGAAAAT 1716
| ||||| ||||| ||| ||||||| | |||||| |||||||| || | || ||
Sbjct 1697 CAGACAACCTTTT-TGATAACAGTGATAGTAGTGACAATGATAT----GG-A-AG---AT 1746
Query 1717 AATGACCTT-GTGGGTATTGGAGATACTGCTTCACCTGCTAGAAACACTGGAGCCATAAC 1775
||||| || | || | | ||||| ||||||||||||||||||||||| | |||| |
Sbjct 1747 AATGA-GTTAGAGGCTGTAAAAGATAATGCTTCACCTGCTAGAAACACTGAAACCATTAT 1805
Query 1776 AGAGGCTGAGAAGCTCGATGATGA-TGTTGAAAATCCAGCTTCTAAGACAACATTTGATG 1834
|| || |||||| | |||||| | || || ||| ||||| |||||||||||||||||||
Sbjct 1806 GGAAGCCGAGAAGTTGGATGAT-ATTGCTGGAAACCCAGCATCTAAGACAACATTTGATG 1864
Query 1835 TTGCCTTATTTGCGTCAGGCTCTTGGAAGAAGATGAAAGGCTGCCAAAATGCAGAATCCA 1894
| ||||||| ||| |||||||| ||||||||||||| ||||||| |||| ||||||||||
Sbjct 1865 TCGCCTTATATGCATCAGGCTCCTGGAAGAAGATGACAGGCTGCAAAAACGCAGAATCCA 1924
Query 1895 AAAAACCTCCAAAGACACATAAACCAATTTCAAAGGGCCAAGATAAAAAGGAATC----G 1950
||||| || ||||||| ||| || ||||| || |||||||||||||||||| |
Sbjct 1925 AAAAAGCTTCAAAGACGCATGTGCCCATTTCGCAGTCCCAAGATAAAAAGGAATCGAGTG 1984
Query 1951 ----AG--A--GATGA---AGAAAGTGAAGATTCCGAGAGTGAAGCAGAGCAAATGGTTG 1999
|| | ||||| ||||||||| ||||| |||||||||||||||||||||||||
Sbjct 1985 ATTCAGAAAGTGATGATTCAGAAAGTGATGATTCAGAGAGTGAAGCAGAGCAAATGGTTG 2044
Query 2000 ATGGGATTTTGACAT-CTGCTTCAAAGGAAACCTATGAAATTCCTTCTCAAGCAGAGCTT 2058
||||||||||||||| | | |||||||||||| ||||||||||||| |||||||||||||
Sbjct 2045 ATGGGATTTTGACATGCGG-TTCAAAGGAAACGTATGAAATTCCTTGTCAAGCAGAGCTT 2103
Query 2059 ATACAAC-GTGCTTTTGCTGGTGATGACGTTGTTGATGAATTTGAGAAGGATAAACAAGA 2117
|| | | |||||||||||||||||||||||| | ||| |||||||||||||| |||||
Sbjct 2104 GTA-AGCCGTGCTTTTGCTGGTGATGACGTTGAAGGTGACTTTGAGAAGGATAAGCAAGA 2162
Query 2118 GGTTCTAAATCAGGAAGTTCCTGAACCGGAAAAACCAGTTCTAGTTCCTGGTTGGGGACA 2177
||| ||||||||||||||||||||||| || ||||| |||| |||| |||||||||||||
Sbjct 2163 GGTACTAAATCAGGAAGTTCCTGAACCCGAGAAACCGGTTCAAGTTGCTGGTTGGGGACA 2222
Query 2178 ATGGACCAATATCCAAAGA-AAGAGAGGTTTACCTTCATGGATGGTTAGAGAACATGAAG 2236
|||||||||| ||||| | |||||||||||||| ||| |||| ||||||||||| ||||
Sbjct 2223 TTGGACCAATAACCAAA-ACAAGAGAGGTTTACCATCAAGGATTGTTAGAGAACACGAAG 2281
Query 2237 ATGCAAAGAAAAAGAGAAAGCTAGATCTCA-AAACAAGGAAAGACTAT-CGTCTCAGAA- 2293
| || ||||||| |||| ||| || ||||| ||| |||||||||| | | | ||| ||
Sbjct 2282 AAGCCAAGAAAACGAGAGAGCAAGCTCTCAGAAA-AAGGAAAGACGCTTCTT-TCA-AAC 2338
Query 2294 ATGTTATCATATCAGAAAAAGCCGATAAAAAGGCTGACAAACTTCATACGACGACTCTAC 2353
||||||||||||||||||||| |||||||||||||| |||||||| || | || |||||
Sbjct 2339 ATGTTATCATATCAGAAAAAGTTGATAAAAAGGCTGAGAAACTTCAGACAAAGAGTCTAC 2398
Query 2354 CTTTCCCATATACATCTAAGGAAGTTTTCGAACACAGCATGCGCATGCCTATAGGACCCG 2413
||| ||| || ||||| ||||||||||||||||| || ||||| |||||||||||||| |
Sbjct 2399 CTTACCCTTACACATCAAAGGAAGTTTTCGAACAAAGTATGCGTATGCCTATAGGACCTG 2458
Query 2414 AGTTTAATCCTGCGACTATTGTTGGAGCTCTAAACCGACCAGAGGTTGTGAAGAAAGCTG 2473
|||||||||| | ||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 2459 AGTTTAATCCCACAACTATTGTTGGAGTTCTAAACCGACCTGAGGTTGTGAAGAAAGCTG 2518
Query 2474 GTGTGATAATTAAACCGGTCAAATTTGAGGAAGTGAATCCAAACGA-GAA 2522
| ||||| |||||||| ||||| ||||||||||| ||||| || || |||
Sbjct 2519 GAGTGATCATTAAACCTGTCAAGTTTGAGGAAGTAAATCCGAATGACGAA 2568
Score = 505 bits (273), Expect = 1e-141
Identities = 474/571 (83%), Gaps = 14/571 (2%)
Strand=Plus/Plus
Query 329 ATGAGGATGGTGAAGGTGATGATGATAGACACACTCGTATGTTGCAAGATCTCACTGGAA 388
|||| |||| ||| | |||||||||||| ||| | || |||||| || || ||||| |||
Sbjct 452 ATGATGATGATGATGATGATGATGATAGGCACTCACGAATGTTGAAAAATGTCACT-GAA 510
Query 389 -TGCCAAGTGCAGCCTTTCAAGGAGAGAGTAAG-AGAAGACCTGTACTCTTTACTGAAGC 446
|||||| | ||||||||||||||||||||||| | || || |||| ||||||||||| |
Sbjct 511 TTGCCAATTTCAGCCTTTCAAGGAGAGAGTAAGAACAA-ACGTGTAGTCTTTACTGAACC 569
Query 447 GTATCCAGAGTCTGAATTCAATCCTACCCGTGATGTTCTGGAGGGTAAAGGCCTCATTTC 506
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 570 ATATCCAGAGTCTGAATTCAATCCTACCCGTGATGTTCTGGAGGGTAAATCCCTCACCAC 629
Query 507 AGTTGAGGACCTTT-TGGCGCCTCTTGAAGGAAAACCTGGGTTTAATGATCTTAAG-AAG 564
| |||| ||| ||| ||| ||||||| ||||| || ||| || | || ||| ||
Sbjct 630 AATTGATGAC-TTTATGGAGCCTCTTCAAGGATTACATGGAAATAGCCAACT-AAGCAAT 687
Query 565 AGGATCAACCGGATGCAGAAA-GATACTCAGTCTGTTGTTCATGCTCCTCTGCCAAAGCC 623
| |||| |||||||| |||| ||||| |||||| |||||||||||||||||||||||||
Sbjct 688 ATGATCTCCCGGATGC-GAAAAGATACGCAGTCTCTTGTTCATGCTCCTCTGCCAAAGCC 746
Query 624 AGAACGAGAAAGACTGGAACGGAAAGCT-GTGAAAGGACTAGTTGAGAAAGAGTTTAATA 682
||||| |||||||||||||||| | | | | ||| | ||| ||| | || | |||| |||
Sbjct 747 AGAACAAGAAAGACTGGAACGGGATG-TAGCGAATGAACTGGTTTACAAGGGGTTTGATA 805
Query 683 AGTGGGTGCATCTGGTCAAGAGGAATAGGGAGGCACCAACTGTTTACTTCAACCAA-ACT 741
||||||| |||||| || ||||| || |||||||||||| ||||||| |||||| | |
Sbjct 806 TTTGGGTGCCTCTGGTAAAAAGGAACAGAGAGGCACCAACTATTTACTTTAACCAAGA-T 864
Query 742 GTCAGTGTTGGCTACTCTACAGTTGGCGCAATAGCATCAGAGTTTCAACCCAGGACTGAA 801
|||| |||||| |||||||| ||||| || ||||||||| | ||||| ||||||||||||
Sbjct 865 GTCAATGTTGGATACTCTACCGTTGGTGCTATAGCATCACAATTTCATCCCAGGACTGAA 924
Query 802 TTTGAGAAGAAAATGGCTTCTGTACTCAATGATAACGAGCTTGGGGAGGCTCACAAAGAA 861
||||||| ||||||||||||| ||||| ||||| | ||| || ||||||||||||||||
Sbjct 925 TTTGAGATGAAAATGGCTTCTCTACTCGATGATCATGAGATTTTGGAGGCTCACAAAGAA 984
Query 862 GATGGCGCTAAGCTTCTTGAATTGAACGAGG 892
||||| |||| |||||||||||| |||||||
Sbjct 985 GATGGAGCTAGGCTTCTTGAATTCAACGAGG 1015
> AT4G02405.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr4:1057854-1059671
REVERSE LENGTH=1147
Length=1147
Score = 185 bits (100), Expect = 2e-45
Identities = 116/123 (94%), Gaps = 4/123 (3%)
Strand=Plus/Minus
Query 2600 aaatcaagtccaagCTAAAGACTAAAGCTTAGCTCCCAAGATTTTTGTATTCTC-AAACT 2658
||| |||||||||||||||||| |||||||||||| |||||||| ||||||||| |||||
Sbjct 1147 AAA-CAAGTCCAAGCTAAAGACCAAAGCTTAGCTCTCAAGATTTCTGTATTCTCAAAACT 1089
Query 2659 TGTTTAGACACAAATTTTGATCCGAAAAGAAAA-AGTTTTGCTTTGTAATTTGTCTTATT 2717
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 1088 TGTTTAGACACAAATTTTGATCC-AAAAGAAAACAGTTTTGCTTTGTAATTTGTCTTATT 1030
Query 2718 TAT 2720
|||
Sbjct 1029 TAT 1027
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 135099577499
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5