BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490495
Length=2303
Score E
Sequences producing significant alignments: (Bits) Value
AT4G00740.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 3668 0.0
> AT4G00740.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr4:307431-310482 REVERSE
LENGTH=2371
Length=2371
Score = 3668 bits (1986), Expect = 0.0
Identities = 2227/2336 (95%), Gaps = 46/2336 (2%)
Strand=Plus/Plus
Query 1 TTGAGAAATAGTAATATTTTATAATCGCCGACAAAATTCTTCAGATCTCC-AAA-T--AT 56
||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||
Sbjct 49 TTGCGAAATAGTAATATTTTATAATCGCCGAC-AAATTCTTCAGATCTCCAAAATTGAAT 107
Query 57 -ATAATATAAACCCTAAGATTTGCATCTGA-----TCT-------G---G--TC---T-C 94
|| ||||||||||||||||||||||||| ||| | | || | |
Sbjct 108 CTTATTATAAACCCTAAGATTTGCATCTGATCTGCTCTCGAAGACGAAAGCTTCGAGTAC 167
Query 95 ----TGAAGCTAAAGCTATGGGACACCTGAATCTACCTGCATCGAAGCGTAGTAGTAATC 150
|||||||||||||||||||||| |||||||||||||||| |||||| | |||| |
Sbjct 168 TGGTTGAAGCTAAAGCTATGGGACACGTGAATCTACCTGCATCAAAGCGT-G--GTAACC 224
Query 151 CTCGTCAATGGTGTCTCCTCGACATCGTAACCGCTGCTTTCTTCGGTATCGTTCTTCTCT 210
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 225 CTCGTCAATGGCGTCTCCTCGACATCGTAACCGCTGCTTTCTTCGGTATCGTACTTCTCT 284
Query 211 TCTTCATCCTTTTATTTACTCCTCTTGGTGATTCCATGGCTGCTTCTGGTCGGCAAACGC 270
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 285 TCTTCATCCTTTTATTCACTCCTCTTGGTGATTCCATGGCGGCTTCTGGTCGGCAAACGC 344
Query 271 TGCTTCTCTCGACGGCGTCAGATCCGAGGCAACGGCAGCGATTGGTGACTTTGGTTGAAG 330
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 345 TGCTTCTCTCTACGGCGTCAGATCCGAGGCAACGGCAGCGATTAGTGACTTTGGTTGAAG 404
Query 331 CTGGTCAGCATTTGCAGCCGATCGAGTATTGTCCTGCGGAAGCTGTTGCTCATATGCCTT 390
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 405 CTGGTCAGCATTTGCAACCGATCGAGTATTGTCCTGCGGAAGCTGTTGCTCATATGCCTT 464
Query 391 GTGAGGATCCCAGGAGGAATAGTCAGCTTAGTAGAGAGATGAATTTCTATAGGGAGAGAC 450
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 465 GTGAGGATCCGAGAAGGAATAGTCAGCTTAGTAGAGAGATGAATTTCTATAGGGAGAGAC 524
Query 451 ATTGTCCTTTGCCTGAGGAGACTCCTCTCTGTTTGATTCCTCCGCCTTCTGGTTATAAAA 510
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 525 ATTGTCCTTTGCCTGAGGAGACTCCGCTCTGTTTGATTCCTCCGCCTTCTGGTTATAAAA 584
Query 511 TTCCTGTTCCGTGGCCTGAGAGCCTTCACAAGATGCTTTGGCATGCAAACATGCCTTATA 570
|||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||
Sbjct 585 TTCCTGTTCCGTGGCCTGAGAGTCTTCACAAGA---TTTGGCATGCAAACATGCCATATA 641
Query 571 ACAAAATTGCTGACCGGAAAGGTCACCAAGGATGGATGAAAAGGGAAGGGGAATACTTCA 630
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 642 ACAAAATTGCTGACCGGAAAGGTCATCAAGGATGGATGAAAAGGGAAGGGGAATACTTTA 701
Query 631 CTTTCCCAGGCGGTGGCACCATGTTTCCTGGCGGAGCAGGGCAATATATTGAAAAGCTTG 690
||||||||||||||||||| ||||||||||||||||| || ||||| |||||||||||||
Sbjct 702 CTTTCCCAGGCGGTGGCACGATGTTTCCTGGCGGAGCTGGCCAATACATTGAAAAGCTTG 761
Query 691 CACAGTATATTCCGCTTAATGGTGGAACTCTGAGAACTGCCCTTGACATGGGATGCGGGG 750
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 762 CACAGTATATTCCGCTTAATGGTGGAACTTTGAGAACTGCTCTTGACATGGGATGCGGGG 821
Query 751 TAGCTAGTTTCGGAGGCACTCTACTATCTCAAGGCATTTTAGCCCTCTCATTTGCTCCAA 810
|||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct 822 TAGCTAGTTTTGGAGGTACTCTACTATCTCAAGGCATTCTAGCCCTCTCATTTGCTCCAA 881
Query 811 GAGATTCACATAAATCGCAAATACAATTCGCCCTGGAAAGAGGAGTCCCTGCATTTGTTG 870
|||||||||||||||| ||||| || ||||| ||||||||||||| |||||||||||||
Sbjct 882 GAGATTCACATAAATCTCAAATTCAGTTCGCTTTGGAAAGAGGAGTGCCTGCATTTGTTG 941
Query 871 CCATGCTTGGCACTCGTAGACTCCCCTTTCCTGCATACTCCTTTGACCTGATGCATTGTT 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 942 CCATGCTTGGCACTCGTAGACTCCCCTTTCCTGCATACTCCTTTGACCTGATGCACTGTT 1001
Query 931 CCCGATGCTTGATTCCTTTTACGGCTTACAATGCAACTTACTTCATCGAAGTAGATAGGT 990
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1002 CCCGATGTTTGATTCCTTTTACGGCTTACAATGCAACTTACTTCATCGAAGTAGATAGGT 1061
Query 991 TACTGCGCCCTGGAGGATATCTTGTAATCTCTGGTCCACCTGTACAATGGCCTAAACAAG 1050
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1062 TACTGCGCCCTGGAGGATATCTTGTAATCTCTGGCCCACCTGTACAATGGCCTAAACAAG 1121
Query 1051 ACAAAGAATGGGCTGATCTTCAGGCAGTGGCTAGAGCTTTGTGCTATGAGCTAATTGCGG 1110
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1122 ACAAAGAATGGGCTGATCTTCAGGCGGTGGCTAGAGCTTTGTGCTATGAGCTAATTGCGG 1181
Query 1111 TTGATGGAAACACTGTCATCTGGAAGAAGCCTGTTGGAGATTCATGTCTACCCAGCCAGA 1170
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1182 TTGATGGAAACACTGTCATCTGGAAGAAGCCTGTTGGAGATTCATGTCTACCTAGCCAGA 1241
Query 1171 ATGAGTTTGGGCTTGAGTTGTGTGACGAGTCTGTTCCGCCAAGTGATGCATGGTATTTTA 1230
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1242 ATGAGTTTGGGCTTGAGTTGTGTGATGAGTCTGTTCCGCCAAGTGATGCATGGTATTTTA 1301
Query 1231 AATTGAAGAGGTGTGTTACCAGGCCATCATCCGTCAAAGGAGAACATGCTTTGGGAACTA 1290
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1302 AATTGAAGAGGTGTGTTACCAGGCCATCATCCGTCAAAGGAGAACACGCTTTGGGAACTA 1361
Query 1291 TATCCAAGTGGCCGGAGAGGCTTACTAAAGTTCCTTCTAGGGCCATTGTCATGAAAAACG 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1362 TATCCAAGTGGCCGGAGAGGCTTACTAAAGTTCCTTCTAGGGCCATTGTCATGAAAAACG 1421
Query 1351 GATTGGATGTGTTTGAAGCAGATGCAAGGCGGTGGGCAAGACGCGTTGCTTATTACAGGG 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1422 GATTGGATGTGTTTGAAGCAGATGCAAGGCGGTGGGCAAGACGCGTTGCTTATTACAGGG 1481
Query 1411 ATTCTCTTAACTTGAAGCTGAAATCTCCAACTGTCCGCAATGTCATGGATATGAACGCAT 1470
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1482 ATTCTCTTAACTTGAAGCTGAAATCTCCAACTGTCCGCAATGTCATGGACATGAACGCAT 1541
Query 1471 TCTTCGGAGGCTTTGCTGCAGCCCTTGCATCTGATCCTGTGTGGGTTATGAATGTCATTC 1530
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1542 TCTTCGGAGGCTTTGCAGCAACCCTTGCATCTGATCCTGTGTGGGTTATGAATGTCATTC 1601
Query 1531 CAGCTCGGAAGCCATTAACTCTTGACGTGATTTATGACAGAGGTCTCATCGGTGTTTACC 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1602 CAGCTCGGAAGCCATTAACTCTTGACGTGATTTATGACAGAGGTCTCATCGGTGTTTACC 1661
Query 1591 ATGATTGGTGTGAACCATTTTCAACATATCCCCGCACGTATGATTTCATCCATGTATCAG 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1662 ATGATTGGTGTGAACCATTTTCAACATATCCCCGCACGTATGATTTCATCCATGTATCAG 1721
Query 1651 GAATTGAATCACTGATAAAACGACAAGACTCAAGCAAATCGAGGTGCAGTCTAGTAGATC 1710
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 1722 GAATTGAATCACTGATAAAACGACAAGACTCAAGCAAATCGAGGTGTAGCCTAGTAGATC 1781
Query 1711 TAATGGTAGAGATGGATAGAATATTGCGTCCAGAAGGAAAGGTTGTGATCCGAGATTCTC 1770
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1782 TAATGGTAGAGATGGACAGAATATTACGTCCAGAAGGAAAGGTTGTGATCCGAGACTCTC 1841
Query 1771 CTGAAGTGCTAGACAAAGTCGCACGAATGGCCCATGCTGTAAGATGGTCTTCTTCTATAC 1830
|||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 1842 CTGAGGTGCTAGATAAAGTCGCACGAATGGCTCATGCTGTAAGATGGTCTTCTTCCATAC 1901
Query 1831 ACGAGAAAGAACCTGAATCCCATGGAAGAGAGAAGATCCTTATTGCAACCAAATCTCTCT 1890
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1902 ACGAGAAAGAACCTGAATCCCATGGAAGAGAGAAGATTCTTATCGCAACCAAATCTCTCT 1961
Query 1891 GGAAATTGCCATCAAACTCCCACTGAAGACACAAA-GAAAGAAGAAAGGAAGAAGCTCTT 1949
||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||
Sbjct 1962 GGAAATTGCCATCAAACTCCCACTGAAGACACAAAAGAA-GAAGAAAAGAAGAAGCTCTT 2020
Query 1950 CTCAATCTTGTAGGTACTGTCACTTTCTCTCCAGCACC-CATCTGTCTGTCCCTAAGACA 2008
||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||
Sbjct 2021 CTCAATCTTGTAGGTACTGTCACTTGCTCTCCAGC-CCTCATCTGTCTGTCCCTAAGACA 2079
Query 2009 CCAACCAGATGATATAC-CTTTTTTGTGTGTTCGTGACATTGCATCTAAATGTATTACAA 2067
|||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||||
Sbjct 2080 CCAACCAGATGATATATACTTTTTTGTGT-T-CGTGACATTGCATCTGAATGTATTACAA 2137
Query 2068 TCGTATAATGTCCTGATATTGTTAATTCTTGGTCACACGTGGTTGTGTCAGTGATTTATG 2127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2138 TCGTATAATGTCCTGATATTGTTAATTCTTGGTCACACGTGGTTGTGTCAGTGATTTATG 2197
Query 2128 TGAGAGGGGTCTACCTTTGAGAAGCAACTTGTGACCTACATGAGTAAAGTATGCATGTGA 2187
|||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2198 TGAG-GGG-TCTACCTTTTAGAAGCAACTTGTGACCTACATGAGTAAAGTATGCATGTGA 2255
Query 2188 CTCTGCGTATAGTTTTGTACTAGAGACCATGTATTAGTAGGTGCACGTCCTGGATACGTA 2247
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2256 CTCTGCGTATAGTTTTGTACTAGAGACCATGTATTAGTAGGTACACGTCCTGGATACGTA 2315
Query 2248 TTTATGTATTGAACAACTCCCAACTTACTGACAATTCCTATGATTCAATGTTTTAG 2303
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2316 TTTATGTATTGAAAAACTCCCAACTTACTGACAATTCCTATGATTCAATGTTTTAG 2371
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 114306640965
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5