BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490499
Length=2362
Score E
Sequences producing significant alignments: (Bits) Value
AT4G00710.1 | Symbols: BSK3 | BR-signaling kinase 3 | chr4:2900... 2985 0.0
AT1G01740.1 | Symbols: | Protein kinase protein with tetratric... 1114 0.0
AT3G54030.1 | Symbols: | Protein kinase protein with tetratric... 252 1e-65
> AT4G00710.1 | Symbols: BSK3 | BR-signaling kinase 3 | chr4:290048-293453
FORWARD LENGTH=2495
Length=2495
Score = 2985 bits (1616), Expect = 0.0
Identities = 1839/1942 (95%), Gaps = 33/1942 (2%)
Strand=Plus/Plus
Query 444 TCTAACTAGTCGAGTTGAC-AAGGTACGA-CCTTCAGCTTCTGGGTTTACGAAGAGACAT 501
||||||||||||||||||| | ||| || | |||||||||||||||||||||||||
Sbjct 522 TCTAACTAGTCGAGTTGACTCA-GTA-GAGTCGAAAGCTTCTGGGTTTACGAAGAGACAT 579
Query 502 CTCCTAATTGGAACAAAACCTTTGCTTTCCATTGGGCTGa-aaaaaaGCAAGAGTCTTGG 560
|||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||| |
Sbjct 580 CTCCTAATTGAAACAAAACCTTTCCTTTCCATTGGGCTGAGAAAAAAGCAAGAGTCTTTG 639
Query 561 AATAGTTTTTGGAGCGTGG-TTTATTTAGATGGGAGGTCAATGCTCTAGCCTGAGTCAGT 619
|||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 640 AATATTTTTTGGAGCGTGGTTTTATTTAGATGGGAGGTCAATGCTCTAGCCTGAGT---T 696
Query 620 GTTGCAGGAACTCTTCACACAAGACAGCTGTTCTTGAAGCTCCTGATGTTGATAATGGAG 679
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 697 GTTGCAGGAACACTTCACACAAGACAGCTGTTCTTGAAGCTCCTGATGTTGATAATGGAG 756
Query 680 AGAGTAGTGAGATCACTGATGTTCCTAATTTCCGGGAGTACACATTAGAACAGCTTAAGG 739
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 757 AGAGTAGTGAGATCACTGATGTTCCTAATTTCCGGGAGTATACTTTAGAACAGCTTAAGG 816
Query 740 CGGCTACTTCTGGTTTTGCTGTGGAGTATATTGTATCTGAGCATGGAGAAAAGGCTCCAA 799
| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 817 CAGCTACTTCTGGTTTTGCCGTGGAGTATATTGTATCTGAACATGGAGAAAAGGCTCCAA 876
Query 800 ATGTTGTCTATAAAGGGAAATTGGAGAATCAAAAGAAGATTGCTGTCAAGCGTTTCACTA 859
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 877 ATGTTGTCTATAAAGGGAAATTGGAGAACCAAAAGAAGATTGCTGTCAAGCGTTTTACTA 936
Query 860 GAATGGCCTGGCCTGATGCACGACAGTTCTTGGAGGAAGCGAGGTCGGTTGGTCAGCTGC 919
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 937 GAATGGCCTGGCCTGATTCACGACAGTTCTTGGAGGAAGCGAGGTCGGTTGGTCAGCTAC 996
Query 920 GGAGTGAGAGAATGGCCAATTTACTCGGGTGTTGCTGCGAAGGTGACGAGAGGTTACTCG 979
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 997 GGAGTGAGAGAATGGCCAATTTACTCGGATGTTGCTGCGAAGGTGACGAGAGGTTACTTG 1056
Query 980 TAGCCGAGTTTATGCCTAATGAAACACTAGCCAAACACCTTTTTCACTGGGAAACCCAAC 1039
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1057 TAGCAGAGTTTATGCCTAATGAAACACTAGCCAAACACCTTTTTCACTGGGAAACTCAAC 1116
Query 1040 CTATGAAATGGACTATGAGGCTGCGGGTTGTTTTATATCTAGCACAAGCTCTTGAATACT 1099
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1117 CTATGAAATGGACTATGAGGCTACGAGTTGTTTTATATCTAGCACAAGCTCTTGAATACT 1176
Query 1100 GCACCAGCAAAGGCCGTACTCTTTACCACGACCTCAATGCTTACCGGGTTTTGTTTGATG 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1177 GCACCAGCAAAGGCCGTACTCTTTACCACGACCTCAATGCTTACCGGGTTTTGTTTGATG 1236
Query 1160 AGGAATGCAATCCAAGACTTTCTACTTTTGGCTTGATGAAGAATAGTCGGGACGGAAAAA 1219
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 1237 AGGAATGCAATCCAAGACTATCTACTTTTGGCTTGATGAAGAATAGTCGGGATGGAAAAA 1296
Query 1220 GTTACAGCACTAATCTTGCTTTCACCCCTCCCGAATATCTACGAACTGGGAGAATTACTC 1279
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1297 GTTACAGCACTAATCTTGCTTTCACCCCTCCTGAATATCTACGAACTGGGAGAATTACTC 1356
Query 1280 CAGAGAGTGTGATATACAGCTTTGGCACTCTTCTGCTTGATCTTCTCAGCGGAAAACATA 1339
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1357 CAGAGAGTGTAATATACAGCTTTGGCACTCTTCTGCTTGATCTTCTCAGCGGAAAACATA 1416
Query 1340 TACCTCCTAGCCATGCCCTTGATCTGATTAGAGACAGAAATCTTCAGACACTAACTGATT 1399
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1417 TACCTCCTAGCCATGCCCTTGATCTGATTAGAGACAGAAATCTCCAGACGCTAACTGATT 1476
Query 1400 CTTGCCTAGATGGGCAATTTTCTGATAGTGATGGCACAGAGCTAGTACGCCTGGCTTCTC 1459
|||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1477 CTTGCCTAGATGGGCAGTTTTCTGATAGTGATGGTACAGAGCTAGTACGCCTAGCTTCTC 1536
Query 1460 GTTGTCTTCAGTATGAAGCTCGTGAGCGGCCAAACACGAAATCTTTGGTGACTGCCTTGA 1519
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1537 GTTGTCTTCAGTATGAAGCTCGTGAGCGGCCAAACACCAAATCTTTAGTGACTGCCTTGA 1596
Query 1520 CACCTCTTCAAAAGGACACAGAGGTCCCATCTCATGTTCTAATGGGTCTACCTCACAGTG 1579
|||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 1597 CACCTCTTCAGAAGGAGACAGAGGTCCTGTCTCATGTTCTAATGGGTCTACCTCACAGTG 1656
Query 1580 GTTCAGTCTCTCCTCTGTCCCCTCTTGGTGAGGCTTGTTCAAGAAGGGACCTGACTGCTA 1639
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1657 GTTCAGTCTCTCCTCTGTCCCCTCTTGGTGAGGCTTGTTCAAGAAGGGACCTGACCGCTA 1716
Query 1640 TGCTTGAGATCTTGGATAAACTAGGATACAAAGACGACGAGGGTGTCACCAATGAGCTCT 1699
||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1717 TGCTTGAGATCCTGGAGAAACTTGGATACAAAGACGACGAGGGTGTCACCAATGAGCTCT 1776
Query 1700 CGTTTCAAATGTGGACAGACCAGATGCAAGAGTCTTTGAACTCAAAGAAGAAGGGTGATG 1759
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1777 CGTTTCATATGTGGACAGACCAGATGCAAGAGTCTTTGAACTCGAAGAAGAAGGGTGATG 1836
Query 1760 TGGCTTTCAGGCAAAAAGACTTTAGAGAGGCCATTGAGTGTTACACACAGTTTATTGATG 1819
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1837 TGGCTTTCAGGCAAAAAGACTTTAGAGAGGCCATCGAGTGTTACACACAGTTTATTGATG 1896
Query 1820 GAGGAATGATCTCTCCAACAGTGTGTGCTCGCCGTAGTCTGTGTTACCTAATGAGTGACA 1879
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1897 GAGGAATGATCTCTCCAACAGTGTGTGCTCGGCGTAGTCTGTGTTACCTAATGAGTGACA 1956
Query 1880 TGCCAAAAGAAGCTTTAGATGATGCAATTCAGGCTCAAGTGATCTCTCCCGTGTGGCATG 1939
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1957 TGCCGAAAGAAGCTTTAGATGATGCAATTCAGGCTCAAGTGATCTCTCCCGTGTGGCATG 2016
Query 1940 TCGCGTCATATCTGCAGTCTGCTTCCCTTGCTTTCTTGGGAATGGAAAAGGAATCTCAAA 1999
|||| ||||||||||||||||||||||||| | || |||||||||| |||||||||||||
Sbjct 2017 TCGCATCATATCTGCAGTCTGCTTCCCTTGGTATCCTGGGAATGGAGAAGGAATCTCAAA 2076
Query 2000 TCGCACTCAAAGAGGGCTCGAACCTTGAAGCAAAGAGGAATGCAGGTTCCC-GAGTGAAG 2058
||||||| |||||||||||||||||||||||||||| ||||| || ||||| ||||||||
Sbjct 2077 TCGCACTGAAAGAGGGCTCGAACCTTGAAGCAAAGATGAATGGAG-TTCCCCGAGTGAAG 2135
Query 2059 TAAGATATATAGCGTTTAAAGATTTGTCTT-TTGGGAAAGATGAAAGAACATCTTACCAA 2117
||||||||||||| ||||| ||||| |||| |||||||||||||||||||||||||||||
Sbjct 2136 TAAGATATATAGCATTTAA-GATTTTTCTTGTTGGGAAAGATGAAAGAACATCTTACCAA 2194
Query 2118 GTAAAAGGGGTTTGAATCTTTTGAGCACATTGATGGGAAAACACTCAAAGAGCGATGCAA 2177
||||||||||| ||||||||||||||||| |||||||||||||||||| |||| ||||||
Sbjct 2195 GTAAAAGGGGTATGAATCTTTTGAGCACAATGATGGGAAAACACTCAA-GAGCAATGCAA 2253
Query 2178 AACTATAGACCCGCTTCTTCT--TTGC-T-----------C--TTCTTGTGCCTCTTTTT 2221
|||||||||||| |||||||| ||| | | |||||||||||||||||
Sbjct 2254 AACTATAGACCCTCTTCTTCTGGTTGTATGAGGTGTTTTGCCCTTCTTGTGCCTCTTTTT 2313
Query 2222 ATGGGCATTGAATTGAATGAGTCACTTCCTTTATTGGCTTTGAAATCCATTTCCTGAAAC 2281
||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||
Sbjct 2314 ATGGGCATTGAATTGAAGGAGTCATTTCCTTTATTAGCTTTGAAATCCATTTCCTGAAAC 2373
Query 2282 TTTATTGTACTAAAGAAAAACCATTATTGCAGAAACCAAAAGAGG-TTTTGTTTCTTTTG 2340
|||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 2374 TTTATTGTACTAAA-AAAC-CCATTATTGCAGAAACCAAAAGAGGGTTTTGTTTCTTTTG 2431
Query 2341 ATCCATTGGTCACACAGACTAA 2362
||| || |||||||||||||||
Sbjct 2432 ATCTATAGGTCACACAGACTAA 2453
Score = 409 bits (221), Expect = 8e-113
Identities = 363/423 (86%), Gaps = 43/423 (10%)
Strand=Plus/Plus
Query 1 ACACCCATTAAAATATTGCATCAACTTGTCGGT-AAATTAATTTTTGGCTTATTCTATCT 59
||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||
Sbjct 1 ACACCCATTAAAATATTTCATCAACTTGTCGGTAAAATTAATTCTTGGCTTATTCTATC- 59
Query 60 TTTCTTTCTCTGTCTTGTTCTTTCAATTTCAACAAATAA-AAT-ATACAGATGTGTATAT 117
|||||||||||||||| |||||||||||| | ||||| ||| |||||||||||||||
Sbjct 60 TTTCTTTCTCTGTCTTCTTCTTTCAATTT-TTC-AATAACAATAATACAGATGTGTATAC 117
Query 118 ATTAGATACACGTATACTACTAGCT--ACTTCACTGTGTGATCTGATCT--AG------- 166
||||||||||||||||||| || || |||||||||||||||||||||| ||
Sbjct 118 ATTAGATACACGTATACTAGTA-CTAAACTTCACTGTGTGATCTGATCTAGAGTTTTTAT 176
Query 167 ---AT-A-AA-AAAT-A-A-TCGACAATTTCGGATTTGTTTATGCTTTACTTCACATGAA 217
|| | || |||| | | |||||||||| ||||||||||||| |||||||||||||||
Sbjct 177 ACTATCAGAATAAATAATAGTCGACAATTTGGGATTTGTTTATGGTTTACTTCACATGAA 236
Query 218 TCACATACGTTCATGTCGATTCCTTTGAGATACTCTTGTCTCGATTTCGTGttttttttt 277
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |
Sbjct 237 TCACATACGTTCATGTCGATTCCTTTGAGATACT---GTCTCGATTTCGT-TTTTTTCTC 292
Query 278 ttttttttttCTAATTTAAAATTATTGTAAC-CACGTGGATTTGCTTGTCCTGGTTTTGT 336
|| ||| |||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 293 TTGTTT------AATTTAAAATTATTGTAAAGCACGTGGATTTGCTTGTCTTGGTTTTGT 346
Query 337 TTTCCTC-T-CGAGCGCTTTGATGAAATCGAGGAACCTAGTCAATTTCTTCGTGGATCCA 394
|||| || | ||| | ||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 347 TTTC-TCCTTCGACCTCTTTGATGAAATCGAGGAACCTA--CAATTTCTTCGTCGATCCA 403
Query 395 AAT 397
|||
Sbjct 404 AAT 406
> AT1G01740.1 | Symbols: | Protein kinase protein with tetratricopeptide
repeat domain | chr1:272111-274569 REVERSE LENGTH=1648
Length=1648
Score = 1114 bits (603), Expect = 0.0
Identities = 1139/1394 (82%), Gaps = 52/1394 (4%)
Strand=Plus/Plus
Query 633 TTCACACAAGAC-AGCTGTTCTTGAAGCTCCTGATGTTGATAATGGAGAGAGTAGTGAGA 691
|||||||||||| | ||| |||||||||||| |||||||| || ||||| | |||||
Sbjct 232 TTCACACAAGACTA-CTGCTCTTGAAGCTCCAGATGTTGAAAACAAAGAGAATGGTGAGG 290
Query 692 T-CACTGATGTTCCTAATTTCCGGGAGTACACATTAGAACAGCTTAAG-GCGGCTACTTC 749
| || | ||| | | ||| || || ||| || |||||||||||||| | || || ||
Sbjct 291 TAAAC-GGTGTGCATTCTTTTCGTGAATACTCACTAGAACAGCTTAAGATC-GCCACCTC 348
Query 750 TGGTTTTGCTGTGGAGTATATTGTATCTGAGCATGGAGAAA-AGGCTCCAAATGTTGTCT 808
| |||||||| ||||| || |||||||||| |||||||||| | ||||||||||||||||
Sbjct 349 TTGTTTTGCTTTGGAGAATGTTGTATCTGAACATGGAGAAACA-GCTCCAAATGTTGTCT 407
Query 809 ATAAAGGGAAATTGGAGAATCAAAAGAAGATTGCTGTCAAGCG-TTTCACTAGAA-TGGC 866
|| ||||||||||||||||||| | |||||||||| ||||||| ||| || ||| | ||
Sbjct 408 ATCAAGGGAAATTGGAGAATCATATGAAGATTGCTATCAAGCGCTTT-TCTGGAACT-GC 465
Query 867 CTGGCCTGATGCACGACAGTTCTTGGAGGAAGCGAGGTCGGTTGGTCAGCTGCGGAGTGA 926
|||||||||| | || || ||| |||| ||||| || | |||||||||||| || || |
Sbjct 466 CTGGCCTGATCCTCGCCAATTCCTGGAAGAAGCAAGATTGGTTGGTCAGCTACGCAGCAA 525
Query 927 GAGAATGGCCAATTTACTCGGGTGTTGCTGCGAAGGTGACGAGAGGTTACTCGTAGCCGA 986
|||||||||||||||||||| | |||||| ||||| | |||||||||||| || || ||
Sbjct 526 AAGAATGGCCAATTTACTCGGTTATTGCTGTGAAGGCGGCGAGAGGTTACTTGTGGCTGA 585
Query 987 GTTTATGCCTAATGAAACACTAGCCAAACACCTTTTTCACTGGGAAACCCAACCTATGAA 1046
||||||||||||||| |||||||||||||||||||| |||||||| || | || |||||
Sbjct 586 GTTTATGCCTAATGAGACACTAGCCAAACACCTTTTCCACTGGGATACAGAGCCAATGAA 645
Query 1047 ATGGACTATGAGGCTGCGGGTTGTTTTATATC-TAGCACAAGCTCTTGAATACTGCACCA 1105
|||| | ||| | || |||||| | |||| | | || |||||||||||||||| | |
Sbjct 646 ATGGGCGATGCGACTAAGGGTTGCTCTATA-CATTTCAGAAGCTCTTGAATACTGTAGTA 704
Query 1106 GCAAAGGCCGTACTCTTTACCACGACCTCAATGCTTACCGGGTTTTGTTTGATGAGGAAT 1165
||| || | || || || || || |||||||||||| | ||||| ||||| |||||||
Sbjct 705 ACAATGGACACACGCTATATCATGATCTCAATGCTTACAGAGTTTTATTTGACGAGGAAT 764
Query 1166 GCAATCCAAGACTTTCTACTTTTGGCTTGATGAAGAATAGTCGGGACGGAAAAAGTTACA 1225
| |||||||||||||| || ||||| || ||||||||||||||||| || |||||||| |
Sbjct 765 GTAATCCAAGACTTTCAACATTTGGGTTAATGAAGAATAGTCGGGATGGGAAAAGTTATA 824
Query 1226 GCACTAATCTTGCTTTCACCCCTCCCGAATATCTACGAACTGGGAGAATTACTCCAGAGA 1285
|||| ||||||||||| ||||| || || |||||||||||||||||||| || ||||||
Sbjct 825 GCACAAATCTTGCTTTTACCCCACCTGAGTATCTACGAACTGGGAGAATCACAGCAGAGA 884
Query 1286 GTGTGATATACAGCTTTGGCACTCTTCTGCTTGATCTTCTCAGCGGAAAACATATACCTC 1345
||||||| ||||| |||||||||||||||||||||||||||| |||||| ||||| ||||
Sbjct 885 GTGTGATTTACAGTTTTGGCACTCTTCTGCTTGATCTTCTCACCGGAAAGCATATTCCTC 944
Query 1346 CTAGCCATGCCCTTGATCTGATTAGAGACAGAAATCTTCAGACACTAACTGATTCTTGCC 1405
||||||||||||||||| ||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct 945 CTAGCCATGCCCTTGATTTGATTCGAGACAGAAATCTTCAGACTCTAACCGATTCCTGCT 1004
Query 1406 TAGATGGG-CAATTTTCTGATAGTGATGGCACAGAGCTAGTACGCCTGGCTTCTCGTTGT 1464
| || ||| |||||||| || |||||||| || ||| ||||||||||| | ||| |||||
Sbjct 1005 TGGA-GGGACAATTTTCAGACAGTGATGGTACGGAGTTAGTACGCCTGACATCTTGTTGT 1063
Query 1465 CTTCAGTATGAAGCTCGTGAGCGGCCAAACACGAAATCTTTGGTGACTGC-CTTGACACC 1523
||||||||||||||||||||||| ||||||| ||||||||||| ||||| || || | |
Sbjct 1064 CTTCAGTATGAAGCTCGTGAGCGACCAAACATAAAATCTTTGGTCACTGCACT-GATATC 1122
Query 1524 TCTTCA-AAAGGACACAGAGGTCCCATCTCATGTTCTAATGGGTCTACCTCACAGTGGTT 1582
||| || |||| |||||||||| | |||||||||||||||||||| ||||| ||||||
Sbjct 1123 TCTCCAGAAAG-ACACAGAGGTTCTGTCTCATGTTCTAATGGGTCTGCCTCAAAGTGGTA 1181
Query 1583 CAGT--C-TCTCCTCTGTCCCCTCTTGGTGAGGCTTGTTCAAGAAGGGACCTGAC-TGCT 1638
| | | || |||| ||| ||| ||| ||||||||| || ||| |||||||| | ||
Sbjct 1182 CTTTTGCGTCACCTCCGTCTCCTTTTGCTGAGGCTTGCTCGGGAAAAGACCTGACGT-CT 1240
Query 1639 ATGCTTGAGATCTTGGATAAACTAGGATACAAAGACGACGAGGGTGTCACCAATGAGCTC 1698
||| ||||||||||||| ||| | || ||||||||||| || | | || ||
Sbjct 1241 ATGGTTGAGATCTTGGAAAAAATTGGTTACAAAGACGA------TG--A--A--GATCTT 1288
Query 1699 TCGTTTCAAATGTGGACAGACCAGATGCAAGA-GTCTTTGAACTCAAAGAAGAAGGGTGA 1757
|||||| | ||||||| || ||||||||||| | || | ||||| ||||| || |||||
Sbjct 1289 TCGTTT-A--TGTGGACGGAACAGATGCAAGAAG-CTATAAACTCGAAGAAAAAAGGTGA 1344
Query 1758 TGTGGC-TTTCAGGCA-AAAAGACTTTAGAGAGGCCATTGAGTGTTACACACAGTTTATT 1815
| | || ||| || | |||||||||||| || |||||||||| |||||| |||||| ||
Sbjct 1345 TATTGCATTT-AGA-AGAAAAGACTTTAGTGAAGCCATTGAGTTTTACACGCAGTTTCTT 1402
Query 1816 GATG-GAGGAATGATCTCTCCAACAGTGTGTGCT-CGCCGTAGTCTGTGTTACCTAATGA 1873
||| | |||||||||||| ||||||| | || | || || |||| ||||||||||||
Sbjct 1403 GATTTG-GGAATGATCTCTGCAACAGTCT-TGGTGCGGCGAAGTCAAAGTTACCTAATGA 1460
Query 1874 GTGACATGCCAAAAGAAGCTTTAGATGATGCAATTCAGGCTCAAGTG-ATCTCTCCCGTG 1932
|| ||||| | ||||||||||||||||||||||| ||||||||| | || ||||| ||
Sbjct 1461 GTAACATGGCGAAAGAAGCTTTAGATGATGCAATGAAGGCTCAAG-GCATTTCTCCTGTT 1519
Query 1933 TGGCATGTCGCGTCATATCTGCAGTCTGCTTCCCTTGCTTTCTTGGGAATGGAAAAGGAA 1992
||| |||| || | ||||| ||||||||| | ||| || || |||||||||| ||||||
Sbjct 1520 TGGTATGTTGCATTGTATCTCCAGTCTGCTGCTCTTTCTGTCCTGGGAATGGAGAAGGAA 1579
Query 1993 TCTCAAATCGCACT 2006
||||||||||||||
Sbjct 1580 TCTCAAATCGCACT 1593
> AT3G54030.1 | Symbols: | Protein kinase protein with tetratricopeptide
repeat domain | chr3:20010927-20013693 FORWARD LENGTH=1911
Length=1911
Score = 252 bits (136), Expect = 1e-65
Identities = 705/968 (73%), Gaps = 86/968 (9%)
Strand=Plus/Plus
Query 837 GATTGCTGTCAAGCGTTTCACTAGAATGGCCTGGCCTGATGCA-CGACAGTTCTTGGAGG 895
|||||||||||| || |||| | | | || ||| ||||| || ||||||||| |||| |
Sbjct 475 GATTGCTGTCAAACGATTCAATCGCCTTGCTTGGGCTGAT-CATCGACAGTTCCTGGATG 533
Query 896 AAGC-GAGGTCGGTTGGTCAGC-TGCGGAGTGAGAGAATGGCCAAT-TTACTCGGGTGTT 952
|||| | | | ||||| ||| || ||||||| ||| | || ||| | | | || ||||
Sbjct 534 AAGCTAAAG-CTGTTGG-GAGCTTGAGGAGTGATAGATTAGCGAATCTGA-TTGGATGTT 590
Query 953 GCTGCGAAGGTGACGAGAGGTTACTCGTAGCCGAGTTTATGCCTAATGAAACACTAGCCA 1012
||| ||||| || ||||| ||||| || || |||||||||||| ||||||| || | ||
Sbjct 591 GCTTTGAAGGAGAAGAGAGATTACTAGTTGCTGAGTTTATGCCTCATGAAACGCTTG-CA 649
Query 1013 AA-CACCTTTTTCACTGGGA-AACCCAA-CCTATGAAATGGACTATGAGGCTGCGGGTTG 1069
|| || ||||| |||||||| || || || ||||||||| | ||||| | | ||||
Sbjct 650 AAGCATCTTTTCCACTGGGAGAA--TAATCCGATGAAATGGGCGATGAGATTAAGAGTTG 707
Query 1070 TTTTATATCTAGCACAAGCTCTT-GAATACTGCACCAGCAAAGGCCGTA-CTCTT-TACC 1126
|| | | |||||||||| || ||||| || | | ||||| | | || || || |
Sbjct 708 CATTGTGTTTAGCACAAGC-ATTGGAATATTGTAGTAATAAAGGGAG-AGCT-TTGTATC 764
Query 1127 ACGACCTCAATGCTTACCGGGTTTTGTTTGATGAGGAAT-GCAATCCAAGACTT-TCTAC 1184
| || |||||||||||| ||||||||||||| ||| || | ||||| || || |||
Sbjct 765 ATGATCTCAATGCTTACAGGGTTTTGTTTGACAAGG-ATGGGAATCCCAG-GTTGTCTTG 822
Query 1185 TTTTGG-CTTGATGAAGAATAGTC-GGGACGGAAAAAGTTACAGCACTAATCTT-GC-TT 1240
|||||| | | ||||| ||||| | | || || || ||||| ||||| || ||| || ||
Sbjct 823 TTTTGGAC-TCATGAAAAATAG-CAGAGATGGGAAGAGTTATAGCAC-AAACTTGGCATT 879
Query 1241 TCACCCCTCCCGAATATCTACGAACTGGG-AGAATTACTCCAGAGAGTG-TGATATACAG 1298
| || ||||| || ||| | ||||| ||| ||| |||| |||||||||| || ||| |||
Sbjct 880 T-ACTCCTCCAGAGTATTTGCGAAC-GGGTAGAGTTACACCAGAGAGTGTTG-TATTCAG 936
Query 1299 CTTTGGCACTC-TTCTGCTTGATCTTC-TCAGCGGAAAACATATACCTCCTAGCCATGCC 1356
||||| || | || |||| |||| || | || ||||||||||| || || || |||||
Sbjct 937 TTTTGGAAC-CGTTTTGCTCGATC-TCATGAGTGGAAAACATATTCCACCGAGTCATGCG 994
Query 1357 CTTGATCTGATTAGAGAC-AGAAATCTTCAGACACTAACT-GATTCTTGC-CTAGATGGG 1413
||||| || || |||| | |||| | | || | ||| | ||||| ||| || || |||
Sbjct 995 CTTGACCTAATCAGAGGCAAGAACTGTGCA-ATGTTAA-TGGATTC-TGCTCTCGA-GGG 1050
Query 1414 -CAATTTTCTGATA-G-TGATGGCACAGAGCTAGTACGCCTGGCTTCTCGTTGTCTTCAG 1470
| | ||||| | | | || || || |||||||||||| | || | |||||||| |||
Sbjct 1051 TC-A-TTTCTCAAACGAAGACGGAACTGAGCTAGTACGCTTAGCCACACGTTGTCTGCAG 1108
Query 1471 TATGAAGCTCGTGAGCGGCCAAACACGAAATCTTTGGTGACTGC-CTTGACACCTCTTCA 1529
||||||||||| || | ||||| ||||||| | |||||| | |||| || | || ||
Sbjct 1109 TATGAAGCTCGAGAAAGACCAAATGTGAAATCTCTCGTGACTTCACTTGTCA-CACTCCA 1167
Query 1530 AAAGGACA-CAGAGGTCCCAT-CTCATGTTCTAATGGGTCTA--CC-T--CA-C-A-G-T 1578
||||| | | || || | | || | ||||| |||||| || || | | | | | |
Sbjct 1168 GAAGGA-ATCTGATGTAGCTTCCT-ACGTTCTTATGGGTATACCCCATGAAACCGAGGCT 1225
Query 1579 G--GTTCAGTCT---C-TCCTCTGTC-CCCTCTTGGTGAGGCTTG-TTCAAGAAG-GGAC 1629
| | ||||| | | || || | |||| ||||||| || || || ||| || |||
Sbjct 1226 GAAGAAGAGTCTCCGCTTTCTTTGACACCCT-TTGGTGATGCATGCTT-AAG-AGTGGAT 1282
Query 1630 CTGACTGCTATGCTTGAGAT-CTTGGATAA-ACTAGGATACAAAGACGACGAGGGTGTCA 1687
|| || || || | || || || | ||| | | |||||||| || || || || |
Sbjct 1283 CTTACAGCCATACAGGAAATACTCAG-TAAGA-TTGGATACAAGGATGATGAAGGAATTG 1340
Query 1688 CCAATGAGCTCTCGTTTCAAATGTGGAC-AGACCAGATGCAAGAGTCTTTGAACTCAAAG 1746
|||||||||||||||||||||||||||| | | |||||||| || ||| | || || |||
Sbjct 1341 CCAATGAGCTCTCGTTTCAAATGTGGACCA-ATCAGATGCAGGAATCTCTCAATTCGAAG 1399
Query 1747 AAG-AAGG 1753
||| ||||
Sbjct 1400 AAGCAAGG 1407
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 117268473120
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5