BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490500
Length=3225
Score E
Sequences producing significant alignments: (Bits) Value
AT4G00700.1 | Symbols: | C2 calcium/lipid-binding plant phosph... 4850 0.0
> AT4G00700.1 | Symbols: | C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein | chr4:286051-289514 FORWARD
LENGTH=3375
Length=3375
Score = 4850 bits (2626), Expect = 0.0
Identities = 3054/3257 (94%), Gaps = 44/3257 (1%)
Strand=Plus/Plus
Query 1 CTCTTTATTGTTCTTGCTACTCGTTATTCACCTCTTCTTTTAAAAGTCCATGGTTTTGGT 60
|||||| |||||||||| |||| |||||||||||||||| || |||||||||| || |
Sbjct 46 CTCTTTCTTGTTCTTGCAACTC-TTATTCACCTCTTCTTATAGAAGTCCATGG--TT--T 100
Query 61 TTCGTGTTTCAGAGTTTTCTCAAACTTAGGAA-------T-CTC--C--TT-TC-C-TC- 104
||||||||||||||||||||| ||||||| || | ||| | || || | ||
Sbjct 101 TTCGTGTTTCAGAGTTTTCTCTAACTTAGAAATCTCTTTTCCTCTGCAGTTGTCTCTTCT 160
Query 105 TG----C-A--GTTGATAAGTTGTTTTGAAA-AA-AGCCTAAGCCTCAAATGAGCAATAT 155
|| | | | ||||||| |||||||||| || | |||||| |||||||||||||
Sbjct 161 TGCCTTCTATTGCTGATAAGGTGTTTTGAAAGAAGAAAAAAAGCCTAAAATGAGCAATAT 220
Query 156 AAAGCTAGGCGTTGAAGTGATAAGCGCACAGGGTCTGTTTCAGAGAGACAAGCATAACTC 215
||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 221 AAAGCTAGGAGTTGAAGTGATAAGCGCACAGGGTCTGTTACAGAGAGATAAGCATAACTC 280
Query 216 ATGTAGCCCTTTCGTGGAGCTCAAGTTCGACAACCAGATATTCCGCACAACCACCAAACA 275
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct 281 ATGTAGCCCTTTCGTGGAGCTCAAGTTCGACAACCAGATATTCCGCGCAACGACCAAACA 340
Query 276 CAACGACCCAAATCCTGTCTGGCACGAGTGTTTTTACTTCGTTGTCTCTGATCCTTCCGT 335
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 341 CAACGACCCAAATCCTGTCTGGCACGAGTGTTTTTACTTCGTTGTCTCTGACCCTTCCGT 400
Query 336 CTTGTCAAATCGTACACTCGAAGCCCACGTCTACAGCTACCAGAACGAATTCGATGCTAA 395
|||||||| |||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct 401 CTTGTCAACTCGTACGCTTGAAGCCCACGTTTACAGCTACCAGAACGAATTCGATGCTAA 460
Query 396 GCCCTTTCTTGGCAAAGTTCGAGTCAACGGAACATCTTTTGTTCCTCGCTCTGAAGCAGC 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 461 GCCCTTTCTTGGCAAAGTTCGAGTCAACGGAACATCTTTTGTTCCTCGCTCTGAAGCAGC 520
Query 456 TCCTTTCAATTACCCTCTAGAGAAACGCAGTGTTTTCTCTCGAGCACGTGGAGAACTTGG 515
|||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |
Sbjct 521 TCCTTTCAATTACCCTTTAGAGAAACGCAGTGTTTTCTCTCGAGCCCGTGGAGAACTTTG 580
Query 516 CTTGAGAGTTTTTATCACAGACGATCCTGCTATTACACCTTCTGTCCCAACCCCGGTTCC 575
|||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||
Sbjct 581 CTTGAGAGTTTTTATCACAGACGACCCTTCTGTTACACCTTCTGTCCCAACCCCGGTTCC 640
Query 576 AGAATCTCCTCAAGCTTTTAGCCCAAGTCCGCGTAAAGAACATGTGAAGTCCTTAATCAC 635
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 641 AGAATCTCCTCAAGCTTATAGCCCAAGTCCGCGTAAAGAACATGTGAAGTCCTTAATCAC 700
Query 636 AGCTGATGCAAGTATGGCTGCTGATGAGAGAAGAGAGCTAAAGCCTAAAACACGTACGTT 695
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 701 AGCCGATGCAAGTATGGCTACTGATGAGAGAAGAGAGCTAAAGCCTAAAACACGTACGTT 760
Query 696 TCATAACGCTGCCCCTTTAGTGAAACAACAGCCAATGATGAACTATGGCATCCACGAGAT 755
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 761 TCATAACTCTGCCCCTTTAGTGAAACAACAGCCAATGATGAACTATGGCATCCACGAGAT 820
Query 756 GAGAGCTGCACCGATGCCTCCAAGAGTGGTTCAAGTCAACGGTCCAGGTCCATCCTTGCA 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 821 GAGAGCTGCACCGATGCCTCCAAGAGTGGTTCAAGTCAACGGTCCAGGTCCATCCTTGCA 880
Query 816 CCAGCTGCCACCAGATTTCTCTGTCAAAGAGACAAGCCCTTTGCTCGGAGGTGGACGGAT 875
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 881 CCAGCTGCCACCAGATTTCTCTGTCAAAGAAACAAGCCCTTTGCTCGGAGGTGGACGGAT 940
Query 876 CGTTGGAGGACGAGTGGTTCGTGGTACAGAGAAGCCAACAAGCGGCACATATGATCTCGT 935
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 941 CGTTGGAGGACGAGTGGTTCGTGGTACAGAGAGGCCAACAAGCGGGACATATGATCTCGT 1000
Query 936 TGAAGAGATGAGATTCCTATACGTGAGAGTTGTGAAGGCGCGTGATCTCCCCAACAAAGA 995
||||||||||| ||| || ||||||||||||||||| |||||||||||||||||||||||
Sbjct 1001 TGAAGAGATGAAATTTCTCTACGTGAGAGTTGTGAAAGCGCGTGATCTCCCCAACAAAGA 1060
Query 996 CCTTACCGGAAGCCTAGACCCGTATGTCGAAGTAAAAATCGGAAACTTCAGAGGTGTTAC 1055
|||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 1061 CCTTACAGGAAGCCTAGACCCGTATGTCGTAGTAAAAATCGGAAACTTCAAAGGTGTTAC 1120
Query 1056 CACGCATTTTGACAAAAATTCAAATCCGGAGTGGAACCAAGTCTTTGCCTTCGC-AAGAG 1114
||| |||||| |||| ||| || |||| |||||||||||||||||||||||||| || ||
Sbjct 1121 CACACATTTTAACAAGAATACAGATCCCGAGTGGAACCAAGTCTTTGCCTTCGCTAA-AG 1179
Query 1115 ATAATCTTCAGTCAAACTTTCTTGAAGTTGTGGTGAAGGATAAAGACATTGTCCTTGATG 1174
||||||||||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct 1180 ATAATCTTCAGTCGAACTTTCTTGAAGTTATGGTCAAGGATAAAGACATTCTCCTTGATG 1239
Query 1175 ATTTTGTTGGGATCGTTAAATTCGATCTCCGTGAGGTTCAGTCTCGCGTTCCTCCGGATA 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1240 ATTTTGTTGGGATCGTTAAATTCGATCTCCGTGAGGTTCAGTCTCGCGTTCCTCCTGATA 1299
Query 1235 GTCCTTTAGCTCCCGAGTGGTACAGATTGGAGAACAAGAGAGGTGAGAAGAAGAATTATG 1294
|||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 1300 GTCCTTTAGCTCCCCAGTGGTACAGACTGGAGAACAAGAGAGGCGAGAAGAAGAATTATG 1359
Query 1295 AGATAATGCTTGCTGTGTGGTCTGGAACTCAGGCTGATGAAGCTTTCGGGGATGCGACTT 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1360 AGATAATGCTTGCTGTGTGGTCTGGAACTCAGGCTGATGAAGCTTTCGGGGATGCGACTT 1419
Query 1355 TCTCAGATTCATTGGTATCTTCAGACAGCTCCAACATTATATCCGCTAACCTGCGCTCAA 1414
||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1420 TCTCAGACTCATTGGTAGATTCAGACAGCTCCAACATTATATCCGCTAACCTGCGCTCAA 1479
Query 1415 AAGTGTACCATTCGCCTCGCCTATGGTACCTAAGGGTGCAAATATTGGAGGCTCAGGACG 1474
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1480 AAGTGTACCATTCGCCTCGGCTATGGTACCTAAGGGTGCAAATATTGGAAGCTCAGGACG 1539
Query 1475 TCATCATCGTCTCTGATAAATCCCGTCTTCCAGAAG-CTTT-TGTGAGGATAAAAGTCGG 1532
|||||||||| ||||| ||||||||| ||||||| | |||| || ||| ||||||||||
Sbjct 1540 TCATCATCGTGTCTGACAAATCCCGTGTTCCAGAGGTCTTTGTGCGAG--TAAAAGTCGG 1597
Query 1533 TAATCAGATGTTAATGACTAAATTTTCCCAGAGAAGCAATAATCCAAAATGGGGAGATGA 1592
|||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 1598 TAATCAGATGTTAAGGACTAAATTTCCCCAGAGAAGCAATAATCCAAAATGGGGTGATGA 1657
Query 1593 ATTCACGTTTGTAGTCGCAGAGCCGTTTGAGGA-AAGCATGGTTCTCTCCGTCGAAGATC 1651
||||||||||||||||| |||||||||||||| || | |||| |||||||| |||||||
Sbjct 1658 GTTCACGTTTGTAGTCGCGGAGCCGTTTGAGGATAA-CTTGGTCCTCTCCGTGGAAGATC 1716
Query 1652 ACACTGCTCCTAACAGAGATGAGCCAGTAGGAAAAGCTGTGATTTCGATGACTGACATTG 1711
||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| |
Sbjct 1717 ACACTGCTCCTAACAGAGACGAGCCAGTAGGAAAAGCTGTGATTTTGATGAATGACATAG 1776
Query 1712 AGAGACGTATAGATGATAAACCTTTTCATGACCGCTGGGTTCATCTCGAAGACTCCATCT 1771
||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1777 AGAAACGTATAGATGATAAACCTTTTCATGACCGATGGGTTCATCTTGAAGACTCCATCT 1836
Query 1772 CAGACGCTATGGATGCTGATAAAGCTAAGAAAGTGAAATTCGCTACAAGGCTCCGTTATA 1831
||||||||||||||| ||||||||| ||||||||||| |||||||| |||||||| ||||
Sbjct 1837 CAGACGCTATGGATGTTGATAAAGCCAAGAAAGTGAAGTTCGCTACTAGGCTCCGGTATA 1896
Query 1832 AGGCGGTTCTTGATGGAGGCTACCACGTTTTTGATGAGTCCATGTATAACAGCAGTGATC 1891
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1897 AGGCGGTTCTCGATGGAGGCTACCACGTTTTTGATGAGTCCATGTATAACAGCAGTGATC 1956
Query 1892 TCAGACCTTCGTCAAAAAAGCTCTGGAAATCAGCGATCGGAGTCTTGGAGCTCGGGATAC 1951
||||||||||||| | ||||||||||||| |||| || || |||||||||||||||||||
Sbjct 1957 TCAGACCTTCGTCGAGAAAGCTCTGGAAACCAGCAATTGGTGTCTTGGAGCTCGGGATAC 2016
Query 1952 TTAACGCAAATGTGTTTCATTCGATGAAAACTCGGGATGGGAAAGGTACTTCGGACACAT 2011
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct 2017 TTAACGCAAATGTGTTCCATTCGATGAAAACTCGGGAAGGGAAAGGTACTTCGGACACGT 2076
Query 2012 ACGTTGTTGCCAAATACGGTCACAAATGGGTTCGATCACGAACTGTAATCAACACCATGA 2071
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||
Sbjct 2077 ACGTTGTTGCCAAATACGGTCACAAATGGGTTCGGTCACGAACTGTGATCAACAGCATGA 2136
Query 2072 ATCCAAAGTACAATGAGCAATACACATGGGAGGTTTTTGATCCTGCAACAGTTTTAACCA 2131
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2137 ATCCAAAGTACAATGAGCAATACACATGGGAGGTTTTTGATCCTGCAACGGTTTTAACCA 2196
Query 2132 TCTGCGTCTTTGATAACGCTCATTTCACAGCTGGAGATGGCGGAAACAAGAGAGATCAGC 2191
||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 2197 TCTGCGTCTTTGACAACGCTCATTTCGCAGCAGGAGATGGCGGAAACAAGAGAGATCAGC 2256
Query 2192 CGATTGGGAAAGTCCGCATTAGACTCTCGACTCTTCAGACGGGCCGTGTCTACACGCACG 2251
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 2257 CGATTGGGAAAGTCCGCATTAGACTCTCGACTCTTCAGACGGGCCGTGTGTACACGCATG 2316
Query 2252 CTTACCCTTTACTTGTTCTACAACCTCCTGGTCTTAAGAAAAGAGGGGAGCTTCACTTAG 2311
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct 2317 CTTACCCTTTACTTGTTCTACAACCTACTGGTCTTAAGAAAAGAGGAGAGCTTCACTTAG 2376
Query 2312 CGGTGAGATTCACCTGCACATCGGTCTCCAATATGCTGATAAAATACACCAGACCTCTCC 2371
|||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||
Sbjct 2377 CGGTGAGATTCACCTGCACATCGGTCTCCAGTATGCTGATGAAATACACAAAACCTCTCC 2436
Query 2372 TGCCTAAAATGCATTACATACTACCCTTATCCACAAACCAACAGGAATCTCTCAAGGCGC 2431
||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||
Sbjct 2437 TGCCTAAAATGCATTACATACTACCCTTATCCACAAACCAACAGGAAGCTCTTAAGATGC 2496
Query 2432 AGGCTTTCAACATAATTGTTGTTCGTTTAGGCCGGTCCGAGCCACCGCTGAGACGGGAAG 2491
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2497 AGGCTATCAACATAATTATTGTTCGTTTAGGCCGGTCCGAGCCACCGCTGAGACGGGAAG 2556
Query 2492 TGATTGAGTATTTGACAGATGTG-AAAAGTCAGCTGTTCAGCATGAGGCGAAGCAAAGCC 2550
|| |||| |||||||||||| || |||||||||||||||||||||||| |||||||||||
Sbjct 2557 TGGTTGACTATTTGACAGAT-TGGAAAAGTCAGCTGTTCAGCATGAGGAGAAGCAAAGCC 2615
Query 2551 AACTTCAATAGGTTCACGACGGTGTTCTCGGGTGCGCTGTC-GATCTGGAAATGGATGGA 2609
|||||||||||||||||||| |||||||| ||||||||||| | | ||||||||||||||
Sbjct 2616 AACTTCAATAGGTTCACGACAGTGTTCTCCGGTGCGCTGTCTGTT-TGGAAATGGATGGA 2674
Query 2610 ACAAGTGTGCACATGGAAGACTCCTGTGACGACGGCTCTGGTGCACGTGCTGTACGCTAT 2669
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||
Sbjct 2675 ACAAGTGTGCACATGGAAGACTCCCGTGACGACGGCTCTGGTGCACGTGCTCTACACTAT 2734
Query 2670 GCTTGTGACGTTCCCGGAGATGATTTTGCCGACTGTGTTTCTGTATATGGCTGTGATTGG 2729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2735 GCTTGTGACGTTCCCGGAGATGATTTTGCCGACTGTGTTTCTGTATATGGCTGTGATTGG 2794
Query 2730 GATGTGGAATTACAGGTTTAAGCCCAGATTTCCTCCTCATATGGACGCCAAACTGTCTTA 2789
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 2795 GATGTGGAATTACAGGTTTAAGCCTAGATTTCCTCCTCATATGGACGCCAAACTATCTTA 2854
Query 2790 TGCAGACAATGTGAATGCTGATGAGCTCGACGAAGAGTTTGATACCTTCCCGACCGTAAG 2849
|||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2855 TGCAGACAATGTAAATTCTGATGAGCTTGACGAAGAGTTTGATACCTTCCCGACCGTAAG 2914
Query 2850 GGCTCCGGACATTGTGAAAATGAGGTACGACCGGCTGAGAAGTGTGGCCGGGAAGGTACA 2909
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2915 GGCTCCGGACATTGTGAAAATGAGGTACGACCGGCTGAGATCTGTGGCCGGGAAGGTACA 2974
Query 2910 GTCGGTGGCTGGAGACATAGCGGCACAGGGAGAGCGAGTGCAGGCGCTGCTGAGCTGGCG 2969
||||||||||||||||||||| ||||| |||||||||||||| ||| |||||||||||||
Sbjct 2975 GTCGGTGGCTGGAGACATAGCCGCACAAGGAGAGCGAGTGCAAGCGTTGCTGAGCTGGCG 3034
Query 2970 TGATCCACGCGCCACCGCAATTTTCGTGACATTCTGTTTCATCATTGCCATGGCTCTCTA 3029
||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||
Sbjct 3035 TGATCCACGCGCCACCGCAATATTCGTGACGTTCTGTTTCATTATTGCCATGGCTCTCTA 3094
Query 3030 CATTACCCCGTTTAAACTCGTGGCTCTCCTATCGGGATACTACTTCATGCGACACCCTAA 3089
||||||||| |||||||| || ||||| |||| || ||||||||||||||||| || ||
Sbjct 3095 CATTACCCCTTTTAAACTTGTCGCTCTGTTATCCGGTTACTACTTCATGCGACATCCAAA 3154
Query 3090 GCTCCGACACCGCATTCCCTCCGCTCCAGTCAACTTTTTCCGGCGACTTCCGGCCATGAC 3149
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 3155 GCTCCGACACCGCATTCCCTCCGCTCCCGTCAACTTTTTCCGGCGACTTCCAGCCATGAC 3214
Query 3150 CGACTCTATGCTGTGAATCTTCTTATGGATAGAGGAGTCAACAAACATGT-ATGTaaaaa 3208
|||||||||||||||||||||||| ||||||||| | |||||||||||| ||||| | |
Sbjct 3215 CGACTCTATGCTGTGAATCTTCTTCTGGATAGAGTAATCAACAAACATGCCATGTATATA 3274
Query 3209 aaCTCCCTTCTTTGAAT 3225
| ||| |||||||||||
Sbjct 3275 A-CTCTCTTCTTTGAAT 3290
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 160433883714
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5