BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490508
Length=1273
Score E
Sequences producing significant alignments: (Bits) Value
AT4G00590.1 | Symbols: | N-terminal nucleophile aminohydrolase... 1895 0.0
> AT4G00590.1 | Symbols: | N-terminal nucleophile aminohydrolases
(Ntn hydrolases) superfamily protein | chr4:252811-255042
FORWARD LENGTH=1413
Length=1413
Score = 1895 bits (1026), Expect = 0.0
Identities = 1201/1285 (93%), Gaps = 14/1285 (1%)
Strand=Plus/Plus
Query 1 GATGGCTTGCGACGGAGCAGATAAAAGTCGACGCTTTTTCGTGGCGGTTCACGTCGGTGC 60
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct 27 GATGGCTGGCGACGGAGCAGATCAAAGTCGACGCTTTTTCGTGGCGGTTCACGTCGGGGC 86
Query 61 CGGGTATCATGCAGCAGCTAACGAGAAAGCTCTTAGATCCGTCATGAGACGCGCTTGCCT 120
||| |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 87 CGGATATCATGCGGCGGCTAACGAGAAAGCTCTTAGATCTGTCATGAGACGCGCTTGCCT 146
Query 121 AGCAGCGTCGATCATTCTTCG-CAAGGATTCTGGTGAGTGCATAGATGCTGTTTCAGCCG 179
||| ||||||| ||||||||| | ||||||||||||| |||||||||||||||||||| |
Sbjct 147 AGCTGCGTCGACCATTCTTCGTC-AGGATTCTGGTGAATGCATAGATGCTGTTTCAGCTG 205
Query 180 CCATCCAAGTCTTGGAGGACGACCCGAGCACAAATGCTGGTAGAGGCTCTAATCTGACAG 239
|||| |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 206 CCATTCAAGTCCTCGAGGATGACCCGAGCACAAATGCTGGTAGAGGCTCTAATCTGACAG 265
Query 240 AAGATGGTCATGTGGAATGTGATGCTAGTCTTATGGATGGAGATTCAGGGATGTTTGGTG 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 266 AAGATGGTCATGTGGAATGTGATGCTAGTCTTATGGATGGAGATTCAGGGATGTTTGGTG 325
Query 300 GTGTTGGAGCAGTTCCAGGTGTCAGAAATGCTATCAAAATTGCTGCTTTATTGGTGAAAG 359
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 326 GTGTTGGAGCAGTTCCAGGTGTCAGAAATGCTATCAAAATTGCTGCTTTGTTGGTGAAAG 385
Query 360 AGCAGATTAGTGGCTCAACTCTGTTAGGCCGTATACCTCCTATGTTGTTGGTTGGTGAAG 419
||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 386 AGCAGATTACTGGCTCAACTCTCTTAGGCCGTATACCTCCTATGTTGTTGGTTGGTGAGG 445
Query 420 GAGCTCGACGATGGGGTAAATCCAAAGGTGTTCTTTTGCCTGAAACTGTCACAGAAGCTG 479
|||||||||| ||||||||||||||| |||||||| | |||| |||||||||||||||||
Sbjct 446 GAGCTCGACGTTGGGGTAAATCCAAAAGTGTTCTTATACCTGGAACTGTCACAGAAGCTG 505
Query 480 ATCAGTGGCTGACTACAGAGAGAGCAAGAAACCAGTGGAGAAAATTCAAGACCATGCTTT 539
||||||||||| |||||||||||||||||| |||||||||| |||||| |||||||||
Sbjct 506 ATCAGTGGCTGGTTACAGAGAGAGCAAGAAATCAGTGGAGAAGGTTCAAGGCCATGCTTT 565
Query 540 CTGAGGTAGAGGCGAAGAGTAACCTTTCTGCTGAAGAACATCCCAGAGGAACCGAGAATA 599
||||||||| ||| ||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 566 CTGAGGTAGGGGCAAAGAGTATTCTCTCTGCTGAAGAACATCCCAGAGGAACCGAGAATA 625
Query 600 ATGACACATGTGAGGAAAAACC-ATCACCCTGTGTAGCAGTAGATGAGGATAAGATCATG 658
|||| |||||||||||||| | |||| |||||| ||| | |||||||||||||||||||
Sbjct 626 ATGAAACATGTGAGGAAAA-CGTATCATCCTGTGCAGCTGCAGATGAGGATAAGATCATG 684
Query 659 GACACTGTTGGCGTAATTTGTGTTGACAGTCAAGGACACACTGTGTGTGGGTCCTCAAGT 718
||||||||||||||||| |||||||||| | ||||||||| || ||||||||||||||||
Sbjct 685 GACACTGTTGGCGTAATCTGTGTTGACAATGAAGGACACATTGCGTGTGGGTCCTCAAGT 744
Query 719 GGCGGTATTGCAATGAAGATTAGCGGCCGTGTGGGTTTAGCCGCAACGTATGGTTCTGGT 778
|||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||||
Sbjct 745 GGCGGTATTGCAATGAAGATTAGCGGCCGTGTAGGTTTGGCGGCAACATATGGTTCTGGT 804
Query 779 TGCTGGGCATCCTCTAAAGGACCATTTGGAGCTCCATTTCGAGTTGGCTGTTGTGTGTCT 838
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 805 TGCTGGGCATCCTCTAAAGGACCATTTGGAGCTCCATTTCTAGTTGGATGTTGTGTGTCT 864
Query 839 GGAGCTGGAGAGTATCTTATGAGAGGATTTGCAGCGAGAGAGTGTTGTACTTCATTGTCA 898
||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||
Sbjct 865 GGAGCGGGAGAGTATCTTATGAGAGGTTTTGCAGCTAGAGAGTGTTGTACTTCATTGGCA 924
Query 899 CTCTCACAGGCTGGTCCAGCATCTGCTGCCATGAAGGTTTTACGTTCTGTAATGCATCAA 958
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 925 CTCTCTCAGGCTGGTCCAGCATCTGCTGCCATGAAGGTTTTACGTTCTGTAATGCATCAA 984
Query 959 GAGAGTTCGAAAAGTGGAACCGCTGACAAAACTGCAGGAATTCTAGTAGTTCAGGCAGAT 1018
|||||||| |||| |||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct 985 GAGAGTTCAAAAATTGGAACAGCTGATAAAACTGCAGGAATTCTAGTAGTTCAGGCGGAT 1044
Query 1019 GCTTCTGTGGCTGTCCCTGGAGGTAAGCCGGAGCTGAATGCTGTTGAGATAGCCGCTGCT 1078
|||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 1045 GCTTCTGTGGTTGTCCCTGGAAGTAAGCCGGAGCTGAATGCTGTTGAGATAGCTGCTGCT 1104
Query 1079 TACTCGTCACTGTCTTTTGGCGTGGGATACTATGGGAACTCTATAGAGAAGCCAAAGATT 1138
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 TACTCGTCACTTTCTTTCGGCGTGGGATACTATGGGAACTCTATAGAGAAGCCAAAGATT 1164
Query 1139 TCGATTCTTAGGACGAGGAGACAGATGAGTGAGGCTGGGGTAGACCATTTTGAAGCCCGG 1198
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1165 TCGATTCTCAGGACGAGGAGACAGATGAGTGAGGCTGGGGTAGACCATTTTGAAGCCCGG 1224
Query 1199 ATTGATCTCCGCCCAACCTGTTGCTGATTAATTT--GA--T------ATTTTGTGGCGAA 1248
|||||||||||||||||||||||||||||||||| || | ||||||||| |||
Sbjct 1225 ATTGATCTCCGCCCAACCTGTTGCTGATTAATTTCTGAAGTTTTGGTATTTTGTGGAGAA 1284
Query 1249 AAGTTTCAGAATCTGTAACATGGGA 1273
||||||||||||||||||||| |||
Sbjct 1285 AAGTTTCAGAATCTGTAACATAGGA 1309
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 62600079615
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5