BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490542
Length=2964
Score E
Sequences producing significant alignments: (Bits) Value
AT4G00240.1 | Symbols: PLDBETA2 | phospholipase D beta 2 | chr4... 2861 0.0
AT2G42010.1 | Symbols: PLDBETA1, PLDBETA | phospholipase D beta... 1688 0.0
> AT4G00240.1 | Symbols: PLDBETA2 | phospholipase D beta 2 | chr4:106380-110718
REVERSE LENGTH=2784
Length=2784
Score = 2861 bits (1549), Expect = 0.0
Identities = 1691/1762 (96%), Gaps = 0/1762 (0%)
Strand=Plus/Plus
Query 313 TCGTTTTCAAGTCATTCCGATTTATCATACTCGGGCAGGCTAGATTCGTCTACTCATGGT 372
||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||
Sbjct 205 TCGTTTTCAAGTCATTCAGATTTATCATACTCAGGCAGGCTAGATTCGTCTGGTCATGGT 264
Query 373 TATACATCTACCGCATCGCCACATAGTCCCGGCATGCACATTGTGCCCTTTGGTAAAGCC 432
| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 265 TTTACATCTACCGCATCGCCGCATAGTCCCGGTATGCACATTGTGCCCTTTGGTAAAGCC 324
Query 433 TCCTTGAAGGTCCTCTTGTTGCATGGGAATTTGGATATTTGGGTTTCTTGTGCAAATAAT 492
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 325 TCCTTGAAGGTCCTCTTGTTGCATGGTAATTTGGATATTTGGGTTTCTTGTGCTAATAAT 384
Query 493 CTACCAAACATGGATTTGTTCCACAAGACATTGGGTGTTGTGTTTGGAGGCATGAGCAAT 552
||||||||| | |||||||| || ||||||||||||||||||||||| ||||||| ||||
Sbjct 385 CTACCAAACTTAGATTTGTTTCATAAGACATTGGGTGTTGTGTTTGGTGGCATGACCAAT 444
Query 553 ATGATCGAAGGACAGCTGAGCAAGAAGATCACAAGTGATCCTTACGTTTCCATATCAGTT 612
||||||||||| ||| |||||||||||||||| |||||||||||||| |||||||||||
Sbjct 445 ATGATCGAAGGCCAGTTGAGCAAGAAGATCACTAGTGATCCTTACGTGTCCATATCAGTC 504
Query 613 GCAGGTGCAGTCATAGGAAGAACATATGTCATAAGCAACAGCGAAAATCCTGTCTGGCAG 672
|| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 505 GCTGGTGCTGTCATAGGAAGAACATATGTCATTAGCAACAGCGAAAATCCTGTCTGGCAG 564
Query 673 CAGCATTTTTATGTCCCTGTTGCTCATCACGCTGCTGAGGTCCATTTTGTTGTTAAGGAC 732
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 565 CAGCATTTTTATGTCCCTGTAGCTCATCACGCTGCCGAGGTCCATTTTGTTGTTAAGGAC 624
Query 733 AGTGACGCCGTTGGTTCACAGCTTATAGGAATTGTTACAATCCCCGTTGAACAAATATAC 792
||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 625 AGTGATGCCGTCGGTTCACAGCTTATAGGAATTGTTACAATCCCTGTTGAACAAATTTAC 684
Query 793 TCAGGTGCAAGAATTGAAGGGACTTACTCTATTCGTGACAGCAATGGAAAGCCTTGTAAA 852
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 685 TCAGGTGCAAGAATTGAAGGGACTTACTCCATTCGAGACAGCAATGGAAAGCCTTGTAAA 744
Query 853 CCTGGGGCAACTCTATCATTATCGATTCAATATACTTCAATGGATAAACTCAGTGTTTAT 912
|| ||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||
Sbjct 745 CCAGGGGCAACTCTATCATTGTCGATTCAGTATACTTCAATGAATAAACTCAGTGTTTAT 804
Query 913 CACAGCGGAGTTGGTGCAGGTCCCTATTACCAGGGGGTGCCTGGAACATATTTTCCTCTT 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 805 CACAGCGGAGTTGGTGCAGGTCCCTATTACCAGGGGGTGCCTGGAACATATTTTCCTCTT 864
Query 973 AGGGAAGGTGGAAGTGTAACATTGTATCAAGATGCACATGTACCTGAAGGGATGCTCCCG 1032
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 865 AGGGAAGGTGGAAGTGTCACATTGTACCAAGATGCACATGTACCTGAAGGGATGCTCCCG 924
Query 1033 GGAATAAAACTCGGCAATGGAATGTGTTACGAACATGGAAAGTGTTGGCATGATATGTTT 1092
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 925 GGAATAAAACTCGGAAATGGAATGTGTTACGAACATGGAAAGTGTTGGCATGATATGTTT 984
Query 1093 CATGCCATTTGTCAAGCTAGACGTTTGATTTATATTACAGGATGGTCAGTGTGGCATAAT 1152
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 985 CATGCCATTTGTCAAGCTAGACGTTTGATTTATATTACAGGCTGGTCAGTGTGGCATAAT 1044
Query 1153 GTCAGGCTTGTTAGAGATAAAGAAGATCCTGCTTCAGAATGTACTCTGGGTGAGCTTCTA 1212
|||||||||||| | ||||||||||||||| |||||||||||| || |||||||| |||
Sbjct 1045 GTCAGGCTTGTTCGGGATAAAGAAGATCCTTCTTCAGAATGTAGACTAGGTGAGCTCCTA 1104
Query 1213 AGATCAAAGTCCCGAGAAGGTGTGAGAGTCCTGCTTTTGGTTTGGGACGACCCAACTTCA 1272
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 AGATCAAAGTCCCAAGAAGGTGTGAGAGTCCTGCTTTTGGTTTGGGACGACCCAACTTCA 1164
Query 1273 CAAAACATCTTGGGATATATGACAGATGGGGTGATGGGAACCCATGACGAGGAGACACGA 1332
||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1165 CAAAACATCTTGGGATACATGACCGATGGGGTTATGGGAACCCATGACGAGGAGACACGC 1224
Query 1333 CGTTTTTTCAAGGACTCCTCAGTTCAAGTCTTGCTATGCCCTCGAAATGCTGGAAAGCGA 1392
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1225 CGTTTTTTCAAGGACTCCTCAGTGCAAGTCTTGCTATGCCCTCGAAATGCTGGAAAGCGA 1284
Query 1393 CATAGTTGGGTCAAACAGAGGGAAGTTGGAACCATCTATACACACCACCAAAAAACCTTG 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1285 CATAGTTGGGTCAAACAGAGGGAAGTTGGAACCATCTATACACACCACCAAAAAAACTTA 1344
Query 1453 ATAGTAGATGCCGATGCTGGGGGTAACAGAAGGAAAATCGTAGCTTTTGTGGGCGGACTT 1512
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1345 ATAGTAGATGCCGATGCTGGGGGTAACAGAAGGAAAATCGTAGCTTTTGTGGGCGGGCTT 1404
Query 1513 GATCTATGTGATGGCCGATATGATACTCCTCAACATCCGTTGTTTAGGACGCTGCGAACT 1572
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 1405 GATCTATGTGATGGCCGATATGATACTCCTCAACATCCGTTGTTTAGGACACTGCAAACA 1464
Query 1573 GATCATAAAGGTGACTATCACAACCCCACTTTCACGGGTAATGTGTCCGGTTGTCCAAGA 1632
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1465 GATCATAATGGTGACTATCACAACCCCACTTTCACGGGTAACGTGTCCGGTTGTCCAAGA 1524
Query 1633 GAACCTTGGCATGACTTGCACAGTAAGATTGATGGCCCAGCTGCGTATGATGTGCTGACC 1692
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1525 GAACCTTGGCATGACTTGCACAGTAAGATTGATGGCCCAGCTGCGTATGATGTGCTGACA 1584
Query 1693 AATTTTGAGGAGAGGTGGCTGAAGGCTGCTAAGCCTCACAGAATCAATAAACTGAAGACA 1752
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1585 AATTTTGAGGAGAGGTGGCTGAAGGCTGCTAAGCCTCACAGAATCAATAAATTGAAGACG 1644
Query 1753 TCGTATGATGACGCATTACTAAGGATCGACAGGATTCCAGATATATTAAGAGTTTTGGAT 1812
|| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1645 TCATATGATGATGCACTACTAAGGATCGACAGGATTCCAGATATATTAAGAGTTTTGGAT 1704
Query 1813 GCTCCTACTGTTAGTGCAAACGACCCTGAGGCTTGGCATGTTCAGATTTTCCGTTCAATC 1872
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 1705 GCTCCTACTGTTAGTGCAAACGACCCCGAGGCTTGGCATGTTCAGATTTTCCGGTCAATC 1764
Query 1873 GATTCAAACTCTGTGAAAGGTTTCCCAAAGGATCCGAAATATGCTACAAGCAAGAATTTG 1932
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1765 GATTCAAACTCTGTGAAAGGTTTTCCAAAGGATCCAAAATATGCTACAAGCAAGAATTTG 1824
Query 1933 GTGTGCGGTAAGAATGTGCTCATTGACATGAGCATACACACCGCATATGTGAAGGCCATT 1992
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1825 GTGTGCGGTAAGAATGTGCTCATTGACATGAGCATACACACCGCATATGTAAAGGCCATT 1884
Query 1993 CGTGCAGCTCAACACTTCATCTACATCGAGAACCAGTATTTCATTGGATCCTCCTACGAC 2052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1885 CGTGCAGCTCAACACTTCATCTACATCGAGAACCAGTATTTCATTGGATCCTCCTACGAC 1944
Query 2053 TGGAATGCTCACAAGGACATAG 2074
||||||||||||||||||||||
Sbjct 1945 TGGAATGCTCACAAGGACATAG 1966
Score = 1365 bits (739), Expect = 0.0
Identities = 791/817 (97%), Gaps = 0/817 (0%)
Strand=Plus/Plus
Query 2146 GGTGCCAACAACCTGATTCCTATGGAAATTGCATTGAAGATTGCTGATAAGATCAGAGCA 2205
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1966 GGTGCCAACAACCTGATTCCTATGGAAATTGCGTTGAAGATTGCTGATAAGATCAGAGCA 2025
Query 2206 AGGGAACGGTTTGCTGCATATATTGTCATTCCAATGTGGCCGGAAGGAGTTCCAACCGGC 2265
| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 2026 AAGGAACGGTTTGCTGCATATATTGTCATTCCAATGTGGCCAGAAGGAGTTCCTACCGGC 2085
Query 2266 GCCGCTACACAAAGAATTTTATATTGGCAGCACAAGACGATGCAAATGATGTATGGAACT 2325
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2086 GCCGCTACACAAAGAATTCTATATTGGCAGCACAAGACGATGCAAATGATGTATGGAACT 2145
Query 2326 ATCTACAATGCGTTAGTGGAGGCCGGGCTCGAAGGTGAATACTCCCCACAAGACTATCTG 2385
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||
Sbjct 2146 ATCTACAATGCGTTAGTGGAGGCCGGGCTTGAAGATGAATACTCCCCACAAGACTATTTG 2205
Query 2386 AATTTCTTCTGTCTTGGAAACAGAGAAATGGTGAACGGAAATAATGAATCGGGTACAGGA 2445
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2206 AATTTCTTCTGTCTTGGAAACCGAGAAATGGTGAACGGAAATAATGAATCGGGTACAGGA 2265
Query 2446 AGTGCAAGCAATGAGAACACTCCTCAGGGATTATGTCGAAAGAGCAGAAGATTTATGATA 2505
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2266 AGTGCAAGCAACGAGAACACTCCTCAGGGATTATGTCGAAAGAGCAGAAGATTTATGATA 2325
Query 2506 TATGTTCATTCCAAAGGGATGGTTGTTGATGATGAGTATGTGGTAATTGGATCTGCAAAC 2565
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2326 TATGTTCATTCAAAAGGGATGGTTGTTGATGATGAGTATGTGGTAATTGGATCTGCAAAC 2385
Query 2566 ATAAACCAAAGATCAATGGAAGGGACAAGAGATACAGAGATTGCAATGGGAGCTTACCAG 2625
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2386 ATAAACCAAAGATCAATGGAGGGGACAAGAGATACAGAGATTGCAATGGGAGCTTACCAG 2445
Query 2626 CCTCAACATACATGGGCACGACGACAATCTGGTCCTCGGGGTCAGATCTACGGATATAGA 2685
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 2446 CCTCAACATACATGGGCACGACGACAGTCAGGTCCTCGGGGTCAGATCTACGGATATAGA 2505
Query 2686 ATGTCGCTTTGGGCAGAACACATGGCACTGCTAGATGATTGCTTTGTGGAGCCAGAGAGT 2745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2506 ATGTCGCTTTGGGCAGAACACATGGCACTGCTAGATGATTGCTTTGTGGAGCCAGAGAGT 2565
Query 2746 CTAGAGTGTGTAAGGAAAGTGAGAACAATGGCGGAGGATAACTGGAAACAGTTTAGGAGT 2805
|||| |||||||||||||||||||||| |||||||||| |||||| ||||||||||||||
Sbjct 2566 CTAGGGTGTGTAAGGAAAGTGAGAACAGTGGCGGAGGAGAACTGGGAACAGTTTAGGAGT 2625
Query 2806 GAGGAAGTGTCGGAGATGAGAGGACATCTGATGAAATATCCGGTGGAAGTTGATCGGAAA 2865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2626 GAGGAAGTGTCGGAGATGAGAGGACATCTGATGAAATATCCGGTGGAAGTTGATCGGAAA 2685
Query 2866 GGAAAAGTCCGGCCACTTCCAGGGAGCGAGGAGTTCCCTGATGTCGGAGGAAACATTGTC 2925
|| |||||||| ||||||||||| || ||||||||||||||||||||||||||| ||||
Sbjct 2686 GGCAAAGTCCGACCACTTCCAGGAAGTGAGGAGTTCCCTGATGTCGGAGGAAACGTTGTT 2745
Query 2926 GGATCCTTTCTTGCCATACAGGAGAATCTCACAATCT 2962
||||||||||| |||||||||||||||||||| ||||
Sbjct 2746 GGATCCTTTCTAGCCATACAGGAGAATCTCACTATCT 2782
Score = 158 bits (85), Expect = 4e-37
Identities = 124/141 (88%), Gaps = 10/141 (7%)
Strand=Plus/Plus
Query 1 ATGGAGAATTATGGTTCGAA-T-CCATCTTATTACCCTTATAGGCCTCCCCGGCCT--T- 55
|||||||||||||||| ||| | || ||||||||||||| |||||||| |||||| |
Sbjct 1 ATGGAGAATTATGGTTGGAATTACC--CTTATTACCCTTACAGGCCTCCGCGGCCTAATC 58
Query 56 ATCCTTACCCACCACAGCCTCATCACCATGGATCAATGTCTCATTCGGGTCCATTAGACT 115
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 59 CTCCTTACCCAGCACCGCCTCATCACCATGGATCAATGTCTCATTCGGGTCCATTAGAC- 117
Query 116 ACACCCACCACCCTCCATTGA 136
|||| ||||||||||| |||
Sbjct 118 -CACC-ACCACCCTCCAATGA 136
> AT2G42010.1 | Symbols: PLDBETA1, PLDBETA | phospholipase D beta
1 | chr2:17532813-17538400 REVERSE LENGTH=3640
Length=3640
Score = 1688 bits (914), Expect = 0.0
Identities = 1463/1726 (85%), Gaps = 46/1726 (3%)
Strand=Plus/Plus
Query 372 TTATACATCTACCGCATCGCCACATAGTCCCGG-CATGCACATTGTGC-C-CTTTGGTAA 428
|||| ||||||||| ||||||||||||| ||| ||||| | || | | ||||||||
Sbjct 915 TTATGCATCTACCGAATCGCCACATAGT-GCGGATATGCAGA-TG-ACACTGTTTGGTAA 971
Query 429 AGCCTCCTTGAAGGTCCTCTTGTTGCATGGGAATTTGGATATTTGGGTTTCTTGTGC-AA 487
|| || ||||||||||| ||||||||||||||||||||||||||| | | | ||| ||
Sbjct 972 AGGGTCGTTGAAGGTCCTGTTGTTGCATGGGAATTTGGATATTTGGATCTATCATGCTAA 1031
Query 488 ATAATCTACCAAACATGGATTTGTTCCACAAGACATTGGGTGTTGTGTTTGGAGGCA-TG 546
| ||||| || ||||||||| ||||||| |||||| |||||| | |||||||| | | ||
Sbjct 1032 A-AATCTCCCTAACATGGATATGTTCCATAAGACACTGGGTGATATGTTTGGAAG-ATTG 1089
Query 547 AGCA-ATATGATCGAAGGACAGCTGAGCAAG-AAGATCACAAGTGATCCTTACGTTTCCA 604
|| | || ||||| ||||| | | || ||||| || ||||||||||| |||||
Sbjct 1090 -CCAGGGAAAATTGAAGGGCAGCTTA-CTAGTAAGATTACCAGTGATCCTTATGTTTCTG 1147
Query 605 TATCAGTTGCAGGTGCAGTCATAGGAAGAACATATGTCATAAGCAACAGCGAAAATCCTG 664
|||||||||| ||||| || || |||||||| |||||||| || ||||||||||||||||
Sbjct 1148 TATCAGTTGCTGGTGCTGTGATTGGAAGAACGTATGTCATGAGTAACAGCGAAAATCCTG 1207
Query 665 TCTGGCA-GCAGCATTTTTATGTCCCTGTTGCTCATCACGCTGCTGAGGTCCATTTTGTT 723
| ||| | ||| ||||||||||| |||||||||||||| ||||| || || |||||||||
Sbjct 1208 TTTGG-ATGCAACATTTTTATGTTCCTGTTGCTCATCATGCTGCAGAAGTTCATTTTGTT 1266
Query 724 GTTAAGGACAGTGACGCCGTTGGTTCACAGCTTATAGGAATT-GTTACAATCCCCGTTGA 782
||||| |||||||| | || |||||||||||||| || ||| ||||||||||| || ||
Sbjct 1267 GTTAAAGACAGTGATGTTGTGGGTTCACAGCTTATTGG-ATTGGTTACAATCCCGGTGGA 1325
Query 783 ACAAATATACTCAGGTG-CAAGAATTGAAGGGACTTACT-CTATTCGT-GACAGCAATGG 839
|| ||||||||||||| |||| || ||||| ||||| | | |||| | |||| |||||
Sbjct 1326 GCAGATATACTCAGGTGCCAAG-ATCGAAGGAACTTA-TCCGATTC-TAAACAGTAATGG 1382
Query 840 AAAGCCTTGTAAACCTGGGGC-AACTCTATCATTATCGATTCAATATACTTCAATGGATA 898
|||||||||||||| ||||| |||| |||||||||||||||| |||||| | ||||| |
Sbjct 1383 GAAGCCTTGTAAACCAGGGGCAAACT-TATCATTATCGATTCAGTATACTCCTATGGACA 1441
Query 899 AACTCAGTGTTTATCA-CAGCGGAGTTGGTGCAGGTCCCT-ATTACCAGGGGGTGCCTGG 956
||||||| |||||||| || |||||||| |||||| ||| ||||||| ||||| |||||
Sbjct 1442 AACTCAGCGTTTATCATCA-TGGAGTTGGGGCAGGT-CCTGATTACCAAGGGGTACCTGG 1499
Query 957 AACATATTTTCCTCTTAGGGAAGGTGGAAGTGTAACATTGTATCAAGATGCACATGTACC 1016
|||||||||||||||||| |||| |||| ||| | ||||||||||||||||||||| ||
Sbjct 1500 AACATATTTTCCTCTTAGAAAAGGCGGAACTGTGAGATTGTATCAAGATGCACATGTCCC 1559
Query 1017 TGAAGGGATGCTCCCGGGAATAAAACTCGG-CAATGGAATGTGTTACGAACATGGAAAGT 1075
|||||||||||||| || |||| ||| || ||||||||||| ||| |||||||| ||||
Sbjct 1560 AGAAGGGATGCTCCCTGGTATAAGACT-GGACAATGGAATGTCTTATGAACATGGGAAGT 1618
Query 1076 GTTGGCATGATATGTTTCATGCCATTTGTCAAGCTAGACGTTTGATTTATATTACAGGAT 1135
||||||||||||||||| ||||||| |||| || | |||||||||||||| ||||| |
Sbjct 1619 GTTGGCATGATATGTTTGATGCCATACGTCAGGCGCGGCGTTTGATTTATATCACAGGTT 1678
Query 1136 GGTCAGTGTGGCATAATGTCAGGCTTG-TTAGAGATAAAGAAGATCCTGCTTCAGAATGT 1194
||||||||||||| || || | | ||| || | |||||| || |||||| || ||||||
Sbjct 1679 GGTCAGTGTGGCACAAAGTTAAG-TTGATTCGTGATAAATTAGGTCCTGCATCCGAATGT 1737
Query 1195 ACTC-TGGGTGAGCTTCTAAGATCAAAGTCCCGAGAAGGTGTGAGAGTCCTGCTTTTGGT 1253
|||| |||| |||||||||||||||||||||| |||||| ||||||||||| |||||| |
Sbjct 1738 ACTCTTGGG-GAGCTTCTAAGATCAAAGTCCCAAGAAGGAGTGAGAGTCCTCCTTTTGAT 1796
Query 1254 TTGGGACGACCCAACTTCACAAAACATCTTGGGATATATGACAGATGGGGTGATGGGAAC 1313
||||| ||||||||||||| | ||| ||||| |||| ||||||||||| |||| |||
Sbjct 1797 ATGGGATGACCCAACTTCACGTAGCATTTTGGGTTATAAAACAGATGGGGTTATGGCAAC 1856
Query 1314 CCATGACGAGGAGACACGACGTTTTTTCAAGGACTCCTCAGTTCAAGTCTTGCTATGCCC 1373
|||||| ||||| ||||| |||||||| ||| | ||||||||||||||| |||| |||||
Sbjct 1857 CCATGATGAGGAAACACGCCGTTTTTTTAAGCATTCCTCAGTTCAAGTCCTGCTTTGCCC 1916
Query 1374 TCGAAATGCTGGAAAGCGACATAGTTGGGTCAAACAGAGGGAAGTTGGAACCATCTATAC 1433
|||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct 1917 CCGAAATGCTGGAAAGCGACATAGTTGGGTCAAGCAGAGGGAAGTTGGGACAATCTATAC 1976
Query 1434 ACACCACCAAAAAACCTTGATAGTAGATGCCGATGCTGGGGGTAACAGAAGGAAAATCGT 1493
||| || ||||||| | | ||||||||||| |||||||| |||||||||||||||||| |
Sbjct 1977 ACATCATCAAAAAAACGTAATAGTAGATGCTGATGCTGGTGGTAACAGAAGGAAAATCAT 2036
Query 1494 AGCTTTTGTGGGCGGACTTGATCTATGTGATGGCCGATATGATACTCCTCAACATCCGTT 1553
||||||||| || || |||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 2037 AGCTTTTGTCGGTGGGCTTGATCTATGTGATGGCCGATATGACACTCCTCAGCATCCGTT 2096
Query 1554 GTTTAGGACGCTGCGA-ACTGA-TCATAAAGGTGACTATCACAACCCCACTTTCACGGGT 1611
||| ||||| || | | || | |||||||| ||| | ||||||||||||||| |||||
Sbjct 2097 GTTCAGGACACTAC-AGAC-AATTCATAAAGATGATTTTCACAACCCCACTTTTACGGGA 2154
Query 1612 AATGTGTCCGGTTGTCCAAGAGAACCTTGGCATGACTTGCACAGTAAGATTGATGGCCCA 1671
||| | || || |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 2155 AATCTTTCAGGATGTCCAAGAGAACCGTGGCATGACTTACACAGTAAGATTGATGGCCCG 2214
Query 1672 GCTGCGTATGATGTGCTGACCAATTTTGAGGAGAGGTGGCTGAAGGCTGCTAAGCCTCA- 1730
||||| |||||||| |||||||| || || ||||| ||| |||||||||| |||||| |
Sbjct 2215 GCTGCATATGATGTTCTGACCAACTTCGAAGAGAGATGGTTGAAGGCTGCAAAGCCT-AG 2273
Query 1731 CAGAATCAATAAACTGAAGACATCGTATGATGACGCATTACTAAGGATCGACAGGATTCC 1790
| | ||||| || | ||||| || ||||| || || || ||||||| || ||||||||
Sbjct 2274 CGGGATCAAGAAGTTTAAGACTTCCTATGACGATGCGTTGTTAAGGATTGATAGGATTCC 2333
Query 1791 AGATATATTAAGAGTTT-TGGATGCTCCTACTGTTAGTGCA-AACGACCCTGAGGCTTGG 1848
|||||||||| |||||| | ||| ||||||||||||||| | ||||| ||||||||||||
Sbjct 2334 AGATATATTAGGAGTTTCT-GATACTCCTACTGTTAGTG-AGAACGATCCTGAGGCTTGG 2391
Query 1849 CATGTTCAGATTTTCCGTTCAATCGATTCAAACTCTGTGAAAGGTTTCCCAAAGGATCCG 1908
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2392 CATGTTCAGATTTTCCGTTCAATCGATTCAAACTCTGTGAAAGGTTTCCCAAAGGATCCA 2451
Query 1909 AAATATGCTACAAGCAAGAATTTGGTGTGCGGTAAGAATGTGCTCATTGACATGAGCATA 1968
||| |||||||| ||||||| |||||||| || ||||| ||||| ||||| |||||||||
Sbjct 2452 AAAGATGCTACATGCAAGAACTTGGTGTGTGGGAAGAACGTGCTGATTGATATGAGCATA 2511
Query 1969 CACACCGCATATGTGAAGGCCATTCGTGCAGCTCAACACTTCATCTACATCGAGAACCAG 2028
||||| || ||||| || |||||||||||||| |||||||||||||| || ||||| |||
Sbjct 2512 CACACAGCGTATGTCAAAGCCATTCGTGCAGCCCAACACTTCATCTATATTGAGAATCAG 2571
Query 2029 TATTTCATTGGATCCTCCTACGACTGGAATGCTCACAAGGACATAG 2074
||||||||||| || || ||| |||||||||| || ||||||||||
Sbjct 2572 TATTTCATTGGGTCTTCATACAACTGGAATGCGCATAAGGACATAG 2617
Score = 848 bits (459), Expect = 0.0
Identities = 718/838 (86%), Gaps = 38/838 (5%)
Strand=Plus/Plus
Query 2146 GGTGCCAACAACCTGATTCCTATGGAAATTGCATTGAAGATTGCTGATAAGATCAGAGC- 2204
||||| || || ||||||||||||||||||| |||||||| ||||| |||||||| ||
Sbjct 2617 GGTGCGAATAATTTGATTCCTATGGAAATTGCGTTGAAGATAGCTGAAAAGATCAGGGCG 2676
Query 2205 AAGGGAACGGTTTGCTGCATATATTGTCATTCCAATGTGGCCGGAAGGAGTTCCAACCGG 2264
|| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 2677 AA-TGAACGGTTTGCTGCTTATATTGTCATTCCAATGTGGCCGGAAGGTGTTCCAACCGG 2735
Query 2265 CGCCGCTACACAAAGAATT-TTATATTGGCAGCACAAGACGATGCAAATGATGTATGGA- 2322
||| ||||| || || ||| || ||||||||||||||||| || || ||||||||| ||
Sbjct 2736 CGCTGCTACCCAGAGGATTCTT-TATTGGCAGCACAAGACAATACAGATGATGTAT-GAG 2793
Query 2323 ACTATCTACAATGCGTTAGTGGAGGCCGGGCTCGAAGGTGAATACTCCCCACAAGACTAT 2382
|| |||||||| |||||||||||| | ||||| ||||| | || |||||||||||| |||
Sbjct 2794 ACAATCTACAAGGCGTTAGTGGAGACAGGGCTTGAAGGAGCATTCTCCCCACAAGATTAT 2853
Query 2383 CTGAATTTCTTCTGTCTTGGAAACAGAGAAATGGTGAACGGAAATA-ATGAA-TCGGGTA 2440
|| ||||||||||||||||| ||||||||||||||| | || |||| || || || || |
Sbjct 2854 CTCAATTTCTTCTGTCTTGGGAACAGAGAAATGGTGGATGG-AATAGAT-AACTCAGGAA 2911
Query 2441 CAGGAAGTGCAAGCAATG-AGAACACTCCTCAGG-GATT-ATGTC-GAAAGAGCAGAAGA 2496
| || ||| ||||||||| | ||||||||||||| | || | ||| |||| |||||||||
Sbjct 2912 CCGGGAGTCCAAGCAATGCA-AACACTCCTCAGGCG-TTGA-GTCGGAAA-AGCAGAAGA 2967
Query 2497 TTTATGATATATGTTCATTCCAAAGGGATGGTTGTTGATGATGAGTATGTGGTAATTGGA 2556
|||||| | |||||||| || ||||||||||| ||||||||||| || || |||||||||
Sbjct 2968 TTTATGGTCTATGTTCACTCGAAAGGGATGGTAGTTGATGATGAATACGTAGTAATTGGA 3027
Query 2557 TCTGCAAACATAAACCAAAGATCAATGGAAGGGACAAGAGATACAGAGATTGCAATGGGA 2616
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct 3028 TCTGCAAACATAAACCAACGATCAATGGAAGGCACAAGAGATACAGAGATTGCAATGGGA 3087
Query 2617 GCTTACCAGCCTCAACATACATGGGCACG-ACGACAATCTGGTCCTCGGGGTCAGATCTA 2675
||||||||||||||||||||||||||| | | ||| ||||||||||| |||||||||||
Sbjct 3088 GCTTACCAGCCTCAACATACATGGGCAAGGAA-ACATTCTGGTCCTCGTGGTCAGATCTA 3146
Query 2676 CGGATATAGAATGTCGCTTTGGGCAGAACACATGGCA-C-TGCTAGATGATTGCTTTGTG 2733
||||| |||||||||||||||||||| || |||||| | | ||||||| || |||
Sbjct 3147 TGGATACAGAATGTCGCTTTGGGCAGAGCATATGGCAACAT--TAGATGACTG-TTTCAC 3203
Query 2734 G-AGCCAGAGAGTCTAGAGTGTGTAAGGAAAGTGAGAACAATGGC-G-GAGGATAACTGG 2790
||||||||||| |||||||||||||||||||||||||||||| | ||||| | ||||
Sbjct 3204 ACAGCCAGAGAGTATAGAGTGTGTAAGGAAAGTGAGAACAATGGGAGAGAGGA-A-CTGG 3261
Query 2791 AAACAGTTTAGGAG-TGAGGAAGTGTCGGAGATGAGAGGACATCTGATGAAA-TATCCGG 2848
||||||||| | || ||| ||||| || || |||||||||||| | || ||| ||||| |
Sbjct 3262 AAACAGTTT-GCAGCTGAAGAAGTCTCAGACATGAGAGGACATTT-ATTAAAGTATCCAG 3319
Query 2849 TGGAAGTTGATCGGAAAGGAAAAGTCCGGCCACTTCCAGGGAGCGAGGA-GTTCCCTGAT 2907
||||||||||||| |||||||||||||| |||||||| ||||| ||| | |||||| ||
Sbjct 3320 TGGAAGTTGATCGAAAAGGAAAAGTCCGACCACTTCCCGGGAGTGAG-ACGTTCCCGGAC 3378
Query 2908 GTCGGAGGAAACATTGTCGGATCCTTTCTT-GCCATACAGGAGAATCTCACAATCTGA 2964
|||||||| |||||||||||||| || | | |||||||| |||||||| || || |||
Sbjct 3379 GTCGGAGGTAACATTGTCGGATCATT-CATAGCCATACAAGAGAATCTAACCATTTGA 3435
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 147340311591
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5