BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg490661 Length=1360 Score E Sequences producing significant alignments: (Bits) Value AT4G38940.1 | Symbols: | Galactose oxidase/kelch repeat superf... 1855 0.0 > AT4G38940.1 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr4:18152687-18154114 FORWARD LENGTH=1428 Length=1428 Score = 1855 bits (1004), Expect = 0.0 Identities = 1241/1350 (92%), Gaps = 37/1350 (3%) Strand=Plus/Plus Query 30 TTCATTTCCTTCAAAACGGCTACAGAATTA-GGTTTTGTTTCTTCTCTCTCGTCGATTG- 87 ||||||||||| ||||||| |||||||||| ||||||||||||||||||||| |||||| Sbjct 95 TTCATTTCCTTGAAAACGGTTACAGAATTAGGGTTTTGTTTCTTCTCTCTCGCCGATTGA 154 Query 88 -CGTGGAAATGTCTT-CCCAA--ATTATTAGGGCACAGAAGAAGCAACCGCCGGAGCCGC 143 | | |||||||||| ||||| || |||||||||| ||||||||||||||||||||||| Sbjct 155 TC-TTGAAATGTCTTCCCCAATTATAATTAGGGCACCGAAGAAGCAACCGCCGGAGCCGC 213 Query 144 CGTGTCTGATTTCGTTACTCCCTGATGAAATCGTCGTCGATATCGTAGCCCGTGTCCCTA 203 | |||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 214 CATGTCTGATTTCGTTACTCCCCGAAGAAATCGTCGTCGATATCGTAGCCCGTGTCCCTA 273 Query 204 GATGCTATTACCCTACTCTCTCCCAAGTTTCAAGGCGTTTCCGATCACTCGTCGCGTCTC 263 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 274 GATGCTATTACCCTACTCTCTCCCAAGTTTCAAGGCGTTTCCGATCACTCGTCGCTTCTC 333 Query 264 CGGAGCTTTACGCCAGACGATCCTTCTTCGGATGCACAGAGCAATGTCTCTACGTCGCAA 323 ||||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 334 CGGAGATTTACAAGAGACGATCCTTCTTCGGATGCACAGAACAATGTCTCTACATCGCAA 393 Query 324 TCTCCAAAGATCAAACCTCTGATATCCATTGGTTTACTCTTTGCCGGAAACCTAACGGCC 383 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct 394 TCTCCAAAGATCAAACCTCTGATATCCATTGGTTTACTCTGTGCCGGAAACCTAACGGAC 453 Query 384 AACAATTCTCCGGCACC---GCCTCTGATCATCGCTTGGTCCATATCCCCTCTCTCCCTC 440 ||||||||||||||||| ||||||||||||||| |||| ||||||||| ||||||||| Sbjct 454 AACAATTCTCCGGCACCACCGCCTCTGATCATCGCCTGGTACATATCCCCACTCTCCCTC 513 Query 441 CTATGCCTATACAAGGAAGCTATGTTGGCATTGGTTCGAACATCTTTGTGATGGGTGGAT 500 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 514 CTATGCCTATGCATGGAAGCTATGTTGGCATTGGTTCGAACATCTTTGTGATGGGTGGAT 573 Query 501 TTTGCAATTGGAAGATCACACCGAGTGTTTCGCTCATCGATTGTCTAACTCACACGGCTC 560 |||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||| Sbjct 574 TTTGCAATTGGAAGATCACATCGAGTGTTTCGCTCATCGATTGTCGAACTCACACTGCTC 633 Query 561 AGACTCTCCCTGACATGCCTAAGGCCGTTGCTATTTCG-GTCACAGAGCTCATTGATCGG 619 ||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||| Sbjct 634 AGACTCTCCCTAACATGCCCAAGGCCGTTGCT-TTTCCCGTCACAGAGCTCATTGATCGG 692 Query 620 AAGATTTATGTAATCGGAGGATCAGATACGCTCTCGCCGTTGAAATCGCCGTCAAGAAGT 679 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | Sbjct 693 AAGATTTATGTAATCGGAGGATCAGATACGCTCTCGCCGATGAAATCTCCGTCAAGAATT 752 Query 680 ATGATGGTGTATGATACTGATACCGAAATGTGGGAACTTCGGACGAGGCCAGATTGGGAG 739 ||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||| Sbjct 753 ATGATGGTGTATGATACAGATACCGAAATGTGGCAACTTCGGGCGAGGCCAGATTGGGAG 812 Query 740 GCAGGGAAGAGATGGTTTAGCAGTGTGGTAATAGGAGGTAAGATTTACATGAGGACTTAT 799 |||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 813 GCAGGGAAAAAATGGTTTAGCAGTGTGGTTATAGGAGGTAAGATTTACATGAGGACTTAT 872 Query 800 TACAATAGCTTTGTTTACGATCCGATTGA-AGATAGCTGCGTTAGAGACGAGGTTCTGCA 858 ||||||||||||||| |||||||| ||| | | || |||| |||||| |||||| |||| Sbjct 873 CACAATAGCTTTGTTTGCGATCCGAATGATACA-AGTTGCGATAGAGATGAGGTTTTGCA 931 Query 859 TTCTAAGGAGTGGTGGAGTTCGTGTGTGATAGATGATGTGTTGTATTACTATGATGTTCG 918 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct 932 TTCTAAGGAGTGGTGGAGTGCGTGTGTGATAGATGATGTCTTGTATTACTATGATGTTCG 991 Query 919 TGGGAATTGTTTGAGAGCTTATGATCCAAAGCAGAGATCTTGGGGAGTGGTTAAAGGTTT 978 || |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct 992 TGAGAATTGTTTGAGAGCTTATGATCCAAAGCAGAGAGCTTGGGGAGTCGTTAAAGGTTT 1051 Query 979 TGAAGGGTTGTTGCCTGAGGCTTGTAAGTGGTCGAAAACTGTGAGTTGCACCGGTGGGAA 1038 |||||| |||||||||| ||||||||||||||| ||||||||||||| |||||||||||| Sbjct 1052 TGAAGGATTGTTGCCTGTGGCTTGTAAGTGGTCCAAAACTGTGAGTTACACCGGTGGGAA 1111 Query 1039 TTTGGTTCTGTTCTTGCAGAAAACAGAGGAAACGGAGATTTGGTGTGCGGAAATCGCAGT 1098 ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct 1112 ATTGGTTCTGTTCTTGCAGAAAACAGAGAAAACAGAGATTTGGTGTGCGGAAATCGCAGT 1171 Query 1099 GGAAAGACGTGAAGGTGGAGAGATTTGGGGTAAAGTGGAGTGGTGTAGTGTTGTGCTTGG 1158 ||||||||| || |||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 1172 GGAAAGACGCGAGGGTGGAGAGATTTGGGGTAAAGTGGAGTGGTGTAATGTTGTGCTTAG 1231 Query 1159 TGGGAATTTTCACATTATGGATTGTGTAGCTGTTGAGCTCTGATCTTGTGATGAAATAGA 1218 ||||||||||||||| ||||||||||||||||||| |||||||||||||| || |||||| Sbjct 1232 TGGGAATTTTCACATAATGGATTGTGTAGCTGTTGTGCTCTGATCTTGTGTTGTAATAGA 1291 Query 1219 CTTTTGTTGTCCCCTG-TT---CTTGTGTGTTTACTAGCTAGCTTATGAATGTGCTTTAA 1274 ||| || |||||||| || ||||||||||| || ||||||||||||||| | Sbjct 1292 CTT--GT-GTCCCCTGCTTGTTCTTGTGTGTTT--TA-CTAGCTTATGAATGT--T---- 1339 Query 1275 AACTTCCCTGTATTCTTCTGTTTATTAGCGTAAGTTTGTATGGTGTGA-TGTTGTT-T-T 1331 |||||||| | |||||| |||||||||||| ||||||||||| | | ||||||| | | Sbjct 1340 --CTTCCCTGGAATCTTCTTTTTATTAGCGTATGTTTGTATGGTAT-ACTGTTGTTGTGT 1396 Query 1332 T-GGTGGGGGCAATCTTACTTACATTTGTT 1360 | |||||||| ||||||||||||||||||| Sbjct 1397 TTGGTGGGGGAAATCTTACTTACATTTGTT 1426 Score = 58.4 bits (31), Expect = 2e-07 Identities = 31/31 (100%), Gaps = 0/31 (0%) Strand=Plus/Plus Query 1 GAAGGATCTCAGGAGTTTCTGATTTCTCTTT 31 ||||||||||||||||||||||||||||||| Sbjct 19 GAAGGATCTCAGGAGTTTCTGATTTCTCTTT 49 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66967527030 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5