BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg490719 Length=952 Score E Sequences producing significant alignments: (Bits) Value AT4G39410.1 | Symbols: WRKY13, ATWRKY13 | WRKY DNA-binding prot... 1478 0.0 > AT4G39410.1 | Symbols: WRKY13, ATWRKY13 | WRKY DNA-binding protein 13 | chr4:18332878-18334789 REVERSE LENGTH=974 Length=974 Score = 1478 bits (800), Expect = 0.0 Identities = 908/959 (95%), Gaps = 12/959 (1%) Strand=Plus/Plus Query 1 ATGGGTGCGATAAACCAAGGAATAAGCTTGTTTGATGAATCACAAACCATCATAAACCCT 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1 ATGGGTGCGATAAACCAAGGAATAAGCTTGTTTGATGAATCACAAACCGTCATAAACCCT 60 Query 61 ATTAATACTAACCATCTAGGTTTCTTCTTCTCTTTTCCTAGT--CA-CACCTTATCTTCA 117 |||||||| |||||||||||||||||||||||||| |||||| || ||||||||||||| Sbjct 61 ATTAATACCAACCATCTAGGTTTCTTCTTCTCTTTCCCTAGTCACAGCACCTTATCTTCA 120 Query 118 TCATCTTCGTCGCCTTCGTCTTCTCCTTCTTCTCTTGGGTCTCTATTTCTAGGTCAAAAC 177 |||||||||||| |||||||||||||||||||||||| ||||| |||||| ||||| ||| Sbjct 121 TCATCTTCGTCGTCTTCGTCTTCTCCTTCTTCTCTTGTGTCTCCATTTCTTGGTCATAAC 180 Query 178 TCCTTAAACTCCTTCCGTCATAATAACCCTTCCTCATTCATAAGTCATCCTCAAGATCCC 237 ||| |||||||||||| |||||||||||| || |||||||||||||||||||||||| || Sbjct 181 TCCCTAAACTCCTTCCTTCATAATAACCCGTCTTCATTCATAAGTCATCCTCAAGATTCC 240 Query 238 ATCAATTTCATGGCGAATCTCCCCGAAACCCTAATCTCGTCTTTGTCCTCATCAAAGCAA 297 |||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 ATCAATCTCATGACCAATCTCCCCGAAACCCTAATCTCGTCTTTGTCCTCATCAAAGCAA 300 Query 298 AAGGACGATCATGATGGTTTTCTTAATCTCGATCATCATCGTCTTACCGGTGGTATATCA 357 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct 301 AGGGACGATCATGATGGTTTTCTTAATCTCGATCATCATCGTCTTACCGGTAGTATTTCA 360 Query 358 TCCCAAAGACCTTTGCCAAATCCATGGGCATGGAGTAGTCAAGCGGGATACGGAAGCAGC 417 ||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 361 TCCCAAAGACCCCTGTCAAATCCATGGGCATGGAGTTGTCAAGCGGGATACGGAAGCAGC 420 Query 418 CAGAAAAACAACCACGGTAGCGAgattgatgttgatgataatgatgatgaggttggcgat 477 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 421 CAGAAAAACAACCATGGAAGCGAGATTGATGTTGATGATAATGATGATGAGGTTGGCGAT 480 Query 478 ggtggtggtattaatgatgatgataatggtCATCATCATGATCATGATGATACTCCTC-G 536 |||||||| |||||||||||||||||||||| ||||| ||||| |||||||||| | | Sbjct 481 GGTGGTGGCATTAATGATGATGATAATGGTCGTCATC---ATCATCATGATACTCC-CAG 536 Query 537 TCGTCATGATAAACATAACACGGCGTCGTTAGGTGTAGTTTCTTCTCTGAAGATGAAGAA 596 ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 537 TCGTCATGATAAACATAACACAGCGTCATTAGGCGTAGTTTCTTCTCTGAAGATGAAGAA 596 Query 597 GCTTAAGACAAGAAGAAAAGTGAGGGAGCCTCGGTTTTGCTTTAAGACTCTTAGCGAGGT 656 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 597 GCTTAAGACAAGAAGAAAAGTGAGGGAACCTCGGTTTTGCTTTAAGACACTTAGCGAGGT 656 Query 657 TGATGTCTTAGATGATGGATATAGATGGAGAAAGTATGGCCAGAAAGTTGTCAAAAACAC 716 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 657 TGATGTCTTAGATGATGGATATAGATGGAGAAAGTATGGCCAGAAAGTTGTCAAAAACAC 716 Query 717 CCAACATCCCAGGAGCTATTACAGATGCACACAAGACAAGTGTAGAGTGAAGAAGAGAGT 776 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 717 CCAACATCCCAGGAGCTATTACAGATGCACACAAGACAAGTGTAGAGTGAAGAAGAGAGT 776 Query 777 GGAGAGGTTAGCAGATGACCCAAGAATGGTAATCACTACTTACGAAGGAAGACACCTTCA 836 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 777 GGAGAGATTAGCAGATGACCCAAGAATGGTAATCACTACTTACGAAGGAAGACACCTTCA 836 Query 837 ctctccttctaatcatctcgacgacgactctctctcctcctctcacc---actctcctct 893 ||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||| Sbjct 837 CTCTCCTTCTAATCATCTCGACGACGACTCTCTCTCCACCTCTCACCTGCACCCTCCTCT 896 Query 894 ctccAACTTCTTCTGGTGATTTCAATTTGTTTTTCCTTTTGAATCAACCAATATTAAAA 952 |||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||| Sbjct 897 CTCCAACTTCTTCTGGTGATTTCAATTTGTATTTCCATT-GAATCAACCAATATCAAAA 954 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46567054269 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5