BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490728
Length=1587
Score E
Sequences producing significant alignments: (Bits) Value
AT4G39510.1 | Symbols: CYP96A12 | cytochrome P450, family 96, s... 2418 0.0
AT5G02900.1 | Symbols: CYP96A13 | cytochrome P450, family 96, s... 721 0.0
AT5G51900.1 | Symbols: | Cytochrome P450 family protein | chr5... 239 7e-62
> AT4G39510.1 | Symbols: CYP96A12 | cytochrome P450, family 96,
subfamily A, polypeptide 12 | chr4:18368803-18370652 REVERSE
LENGTH=1850
Length=1850
Score = 2418 bits (1309), Expect = 0.0
Identities = 1484/1567 (95%), Gaps = 17/1567 (1%)
Strand=Plus/Plus
Query 28 AAATCAAGCTCCTAACTTTCTCATATGGCTTC-GATAAGCTTACTTGACGCTT-CCATAG 85
||| ||||||||||||| |||||||||||||| | ||||||||||||||| || ||||||
Sbjct 158 AAACCAAGCTCCTAACTCTCTCATATGGCTTCTG-TAAGCTTACTTGACG-TTGCCATAG 215
Query 86 CCATTATTTG-CTTTCTCTTCTTCCATTTC-T-TCATCTTCAAAAAACCTCATGATCAGG 142
|||| ||||| |||| |||||||| ||| | | | | |||||| |||||||||| |||||
Sbjct 216 CCATCATTTGCCTTT-TCTTCTTCTATTACATGT-A-CTTCAAGAAACCTCATGGTCAGG 272
Query 143 TTTTTCGGAACTGGCCAGTTATTGGGATGATT---GGCTTCCTGATGGTTCTCCACCGCA 199
||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 273 TTTTTCGAAACTGGCCAGTTATTGGGATGCTTCCAGGCTTCCTGATGGTTCTCCACCGCA 332
Query 200 TGTACAACTTCGGTGTGGAGGCTCTCGAAATCAGCCACTTAACCTTTCCATTTAAGGGAC 259
| ||||||||||| ||||||||||| ||||| |||||||||||||||| |||||||||||
Sbjct 333 TCTACAACTTCGGCGTGGAGGCTCTTGAAATGAGCCACTTAACCTTTCTATTTAAGGGAC 392
Query 260 CGTGGTTCGCTGGAATGGATATGTTGTTCACAGTTGATCCAGCTAATATTCACTACATCT 319
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 393 CGTGGTTCGCTGAAATGGATATGTTGTTCACAGTTGATCCAGCTAATATTCACTACATAT 452
Query 320 TGAGCTCAAACTTCTCCAATTACACCAAAGGTGCCGACTTTAAAGAAGTCTTTGATGTTT 379
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 453 TGAGCTCAAACTTCTCCAACTATACCAAAGGTGCCGACTTTAAAGAAGTCTTTGATGTTT 512
Query 380 TTGGAGAAATGATCTTTAGTTCGGACTCGGAGCTATGGAAGAATCAAAGAAAAGCTGCTC 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 513 TTGGAGAAATGATCTTTAGTTCGGACTCGGAGCTATGGAAGAATCAAAGAAAAGCTGCTC 572
Query 440 AGTTCATGCTTAACCATCACGAG-TTTCAAAAGCTTTCAATGAGTGCAACGAGGACTAAA 498
| ||||||||||| ||||| | | ||||||||||| ||| ||||||||||||||| |||
Sbjct 573 AATTCATGCTTAATCATCAAG-GCTTTCAAAAGCTATCATTGAGTGCAACGAGGAGTAAG 631
Query 499 CTTTACGACGGTCTTGTTCCTCTTTTCAATCAATATTGCGAGGAAGAGAAGGTCGTGGAT 558
|||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct 632 CTTTACGATGGTCTTGTTCCTCTTTTCAATCAATGTTGTGAGGAAGAGAAGGTCGTGGAT 691
Query 559 TTGCAGCAAGTGTTTCAAAGGTTCACTTTTGACACAACtttttttCTCGTTACGGGGTCT 618
|||||||||||||||||||| ||||||||||| |||||||| ||| | ||||| |||| |
Sbjct 692 TTGCAGCAAGTGTTTCAAAGATTCACTTTTGATACAACTTTCTTTATTGTTACCGGGTTT 751
Query 619 GATCCTAAATCTCTCTCTATTGAAATGCCGGAAGTTGAGTATGCTAAAGCTCTTGACGAT 678
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 752 GATCCTAAATCTCTCTCTATTGAAATGCCGGAAGTGGAGTATGCTAAAGCTCTTGACGAT 811
Query 679 CTTGGAGAAGGGATTTTTTATAGGCACATTAAACCGAAGTTCTTGTGGAAGCTGCAAAAC 738
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 812 CTTGGAGAAGGGATTTTTTATAGGCACATTAAACCGAAGTTCTTCTGGAAGCTGCAAAAC 871
Query 739 CGGTTTGGGTTAGGACAAGAGAAGAGGATGACCGAAGCTGATGCCACTTTTGATCGCGTT 798
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 872 CGGTTTGGGTTAGGGCAAGAGAAGAGGATGACTGAAGCTGATGCCACTTTTGATCGCGTT 931
Query 799 TCAGCGAAATACATATCAGCTAAGAGAGAAGAGATAAGATCACAAGGGATTGATCATCAT 858
|| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 932 TCTGCGAAATACATATTAGCTAAGAGAGAAGAGATAAGGTCACAGGGGATTGATCATCAT 991
Query 859 TCAAATGGTCAAAGTGAGGATCTTTTGACATCTCACATAAAGCTTGATACAACCAAGTAC 918
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 992 GCAAATGGTGAAAGTGAGGATCTTTTGACATCTCACATAAAGCTTGATACAACCAAGTAC 1051
Query 919 GAGCTCTTGAACCCGAGTGATGATAAGTTCCTCAGAGACACCATCTTAGCTTTCAATCTA 978
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1052 GAGCTCTTGAACCCGAGTGATGATAAGTTCCTCAGAGACACCATCTTAGCTTTCAATCTT 1111
Query 979 GCTGGGAGAGACACAATGTCTTCTGCTCTCTCTTGGTTCTTTTGGCTTCTCTCTGAAAAC 1038
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1112 GCTGGGAGAGACACAACGTCTTCTGCTCTCTCTTGGTTTTTTTGGCTTCTCTCTGAAAAC 1171
Query 1039 CCTCAAGTTGTAACAAAGATTCGTAAAGAGATCATC-AGCAAAAATATATCAAAAGACGG 1097
|||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||
Sbjct 1172 CCTCAAGTTGTAACAAAGATTCGTAAAGAGATCATCGA-CAAAAATATTTCAAAAGACGG 1230
Query 1098 AAGAAATGGCCAAGAGAACTTAGACAAGTTGGTCTACTTACATGCCGCGTTGTATGAATC 1157
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1231 AAGAAATGGCCAAGAGAACTTAGACAAGTTGGTCTACTTACATGCGGCGTTGTATGAATC 1290
Query 1158 AATGAGGCTCTATCCACCGGTTGCCTTCCAACGCAAGTCTCCTATAAAACCAGATTTGCT 1217
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 1291 AATGAGGCTCTATCCACCGGTTGCCTTCCAACGCAAGTCTCCTATAAAGCCAGATGTGCT 1350
Query 1218 TCCAAGTGGGCATAAGGTAGATGCAAACTCAGTCATCATAATCTTTCTTTACGGGTTGGG 1277
|||||||||||||||||||| |||||||||||||||||||| ||||||| || ||||||
Sbjct 1351 GCCAAGTGGGCATAAGGTAGAAGCAAACTCAGTCATCATAATTTTTCTTTTCGCGTTGGG 1410
Query 1278 AAGGATGAGAGCGGTTTGGGGAGAAGATGCAACAGAGTTCAAGCCAGAGAGATGGGTTTC 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1411 AAGGATGAGAGCGGTTTGGGGAGAAGATGCAACAGAGTTCAAGCCAGAGAGATGGGTTTC 1470
Query 1338 TGAGACCGGTGGGTTGAGACATGCGCCTTCCTTCAAGTTCTTATCGTTTAACGCCGGTCC 1397
|||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||
Sbjct 1471 TGAGTCCGGTGGGTTGAGACATGCACCTTCCTTCAAGTTTTTATCATTTAACGCCGGTCC 1530
Query 1398 GAGAACTTGTCCTGGTAAGCAATTAGCTATGACTCTAATGAAGACAGTAGTTGTGGAGAT 1457
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1531 GAGAACTTGTCCTGGTAAGCAATTAGCTATGACTCTAATGAAGACCGTAGTTGTGGAGAT 1590
Query 1458 ATTACAAAACTATGATATTAAGGTTATCAAAGGACAGAAGATTGAGCCAGAACCTGGTCT 1517
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 1591 ATTACAAAACTATGATATTGATGTTATCAAAGGACAGAAGATTGAGCCAGAACCTGGTCT 1650
Query 1518 TATGTTGCACATGAAGCATGGGCTTAAAGTCACAATTACTAAGAGATGTTCAGCTTGAAA 1577
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1651 TATGTTGCACATGAAGCATGGGCTTAGAGTCACAATTACTAAGAGATGTTCAGCTTGAAA 1710
Query 1578 TTTATAT 1584
||| |||
Sbjct 1711 TTTGTAT 1717
> AT5G02900.1 | Symbols: CYP96A13 | cytochrome P450, family 96,
subfamily A, polypeptide 13 | chr5:674060-675569 FORWARD LENGTH=1443
Length=1443
Score = 721 bits (390), Expect = 0.0
Identities = 795/982 (81%), Gaps = 62/982 (6%)
Strand=Plus/Plus
Query 617 CTGATCCTAAATCTCTCTCTATTGAAATGCCGGAAGTTGAGTAT-GCTAAAGCTCTTGA- 674
||||||||| ||||||||| ||||||||||| || ||||||| | ||||||||||| ||
Sbjct 479 CTGATCCTAGATCTCTCTCCATTGAAATGCCAGAGGTTGAGT-TCGCTAAAGCTCTCGAT 537
Query 675 CGATCTTGGAGAAGGGATTTTTTATAGGCACATTAAACCGAAG-TTCTTGTGGAAGCTGC 733
| || | |||||||||||| | |||| || ||| |||| || ||||||||||| |||
Sbjct 538 C-ATGTAGGAGAAGGGATTATGCATAGACATGTTAGACCG-AGACTCTTGTGGAAGTTGC 595
Query 734 AAAACCGGT-TTGGGTTAGGACAAGAGAAGAGGATGACCGAAGCTGATGCCACTTTTGAT 792
|||| || |||| || ||||||||||||| | | | ||||||| |||||||| ||
Sbjct 596 AAAA-ATGTGTTGGATTTGGACAAGAGAAGAAGTTTTCAAAAGCTGACGCCACTTTAAAT 654
Query 793 C--GCGTTTCAGCGAAA-TACATATCAGCTAAGAGAGAAGAGATAAGATCACAAGGGATT 849
| |||| | || ||| ||||||| || ||||||||||||| |||||||||||| ||
Sbjct 655 CAAGCGTGT--GC-AAAGTACATATTAGAAAAGAGAGAAGAGACAAGATCACAAGGTTTT 711
Query 850 GATCATCATTCAAATGG-TC--AAAGTGAGGATCTTTTGACAT-CTCACATAAAGCTTGA 905
||| ||||||| || || || ||||||||||| | ||||||| | ||||||||| | ||
Sbjct 712 GATTATCATTCCAACGGATCAGAAAGTGAGGATATATTGACATAC-CACATAAAGATAGA 770
Query 906 TACAACCAAGTACGAGCTCTTGAACCCGAGTGATGATAAGTTCCTCAGAGACACCATCTT 965
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 771 TACAACCAAGTACGAGCTGTTGAATCCGAGTGATGATAAGTTCCTCAGAGACACCATCTT 830
Query 966 AGCTTTCAATCTAGCTGGGAGAGACACAA-TGTCTTCTGCTCTCTCTTGGTTCTTT-TGG 1023
||||||| |||||| || ||||| || | || ||||||| ||| ||||||| ||| |||
Sbjct 831 AGCTTTCGTTCTAGCAGGAAGAGATACCACTG-CTTCTGCCCTCACTTGGTT-TTTCTGG 888
Query 1024 CTTCTCTCTG-AAAACCCTCAAGTTGTAAC-AAAGATTCGTAAAGAGATCATCAGCAAA- 1080
||| | | || |||||||||||||||| || ||| ||||| ||||||||| || |||
Sbjct 889 CTTTTGT-TGGAAAACCCTCAAGTTGTCACTAAA-ATTCGCCAAGAGATCAACA-CAAGT 945
Query 1081 AATA-TATCAAAAGACGGAAGAAAT---G-G--CCAA-G-AGAACTTAGAC-AAGTTGGT 1130
||| | | || || | ||| || | | || | | || |||| || || |||||
Sbjct 946 AATGGTGGCCAA-GA-G-AAGCCATCTTGTGAACCTATGGAGTACTT-GAATAACTTGGT 1001
Query 1131 CTACTTACATGCCGCGTTGTATGAATCAATGAGGCTCTATCCACCGGTTGCC-TTCCAAC 1189
|| ||||||| ||||||||||||| ||||||| ||||||||||||||| || ||| | |
Sbjct 1002 ATATTTACATGGCGCGTTGTATGAAGCAATGAGACTCTATCCACCGGTT-CCATTCGAGC 1060
Query 1190 GCAA-GTCTCCTATAAAACCAGATTTGCTTCCAAGTGGGCATAAGGTAGA-TGCAA--AC 1245
| || ||||||||||||||||||| |||||||||||||||| || || || | ||| |
Sbjct 1061 G-AATGTCTCCTATAAAACCAGATGTGCTTCCAAGTGGGCACAAAGTTGACT-CAAGTA- 1117
Query 1246 TCA-GTCATCATAATCTTTCTTTACGGGTTGGGAAGGATGAGAGCGGTTTGGGGAGAAGA 1304
| | | || | |||||| |||||| |||||| ||||||||||| || |||||||||||
Sbjct 1118 TGAAG--ATTTTGATCTTTATTTACGCGTTGGGGAGGATGAGAGCCGTATGGGGAGAAGA 1175
Query 1305 TGCAACAGAGTTCAAGCCAGAGAGATGGGTTTCTGAGACCGGTGGGTTGAGACATGCGCC 1364
|||| ||||||| ||||||||||||||| |||| ||||| | | |||||||||| |||
Sbjct 1176 TGCATCAGAGTTTAAGCCAGAGAGATGGCTTTCAGAGACAACTAGCTTGAGACATGAGCC 1235
Query 1365 TTCCTTCAAGTTCTTATCGTTTAACGCCGGTCCGAGAACTTGTCCT-GGTAAGCAATTAG 1423
||| |||||||||||| | ||||| || ||||| |||| ||| | | ||||||||| |||
Sbjct 1236 TTCTTTCAAGTTCTTAGCATTTAATGCAGGTCCAAGAAGTTG-CATAGGTAAGCAACTAG 1294
Query 1424 CTATGACTCTAATGAAGACAGTAGTTGTGGAGATATTACAAAACTATGATATTAAGGTTA 1483
|||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||
Sbjct 1295 CTATGACTCTAATGAAGATAGTGGTCGTGGAGATATTACAAAACTATGATATTAAGGTTG 1354
Query 1484 TCAAAGGACAGAAGA---TTGAGCCAGAACCTGGTCTTATG-TTGCACATGAAGCATGGG 1539
||||||| ||||||| |||| |||| ||||||| ||| || | |||||| |||||
Sbjct 1355 TCAAAGGGCAGAAGAAGATTGAACCAGCTCCTGGTCCTATTCTT-CGCATGAAACATGGT 1413
Query 1540 CTTAAAGTCACAATTACTAAGA 1561
|||| ||| ||| |||||||||
Sbjct 1414 CTTAGAGTTACACTTACTAAGA 1435
Score = 209 bits (113), Expect = 6e-53
Identities = 267/338 (79%), Gaps = 24/338 (7%)
Strand=Plus/Plus
Query 149 GGAACTGGCCAGTTATTGGGATGATT--GGCT-TCCTGATGG-TTCTCCACCGCATGTAC 204
|||||||||| ||| | |||||| || || | | || ||| | |||| || || ||
Sbjct 71 GGAACTGGCCGGTTCTCGGGATGCTTCCGGGTCTGCTCTTGGAGT-TCCATCGGATCTAT 129
Query 205 AACTTCGGTGTGGAGGCTCTCGA-AA-TCAGCCACTTAACCTTTCCATTTAAGGGACCGT 262
||||| | ||||||| |||||| || || | |||| || ||||||||||| || || |
Sbjct 130 GACTTCAGCGTGGAGGTTCTCGAGAACTCTG--ACTTGACATTTCCATTTAAAGGCCCAT 187
Query 263 GGTTCGCTGGAATGGATATGTTGTTCACAGTTGATCCAGCTAATATTCACTACATCT--T 320
||||| |||| ||||||||||||||||| ||||||||| |||||||||| | ||| | |
Sbjct 188 GGTTCACTGGTATGGATATGTTGTTCACTGTTGATCCAACTAATATTCA-T-CATATAAT 245
Query 321 GAGCTCAAACTTCTCCAATTACACCAAAGGTGCCGACTTT-AAAGAAGTCTTTGATGTTT 379
||||||||||||||||||||||||||||||| |||| ||| ||| |||| ||||||||||
Sbjct 246 GAGCTCAAACTTCTCCAATTACACCAAAGGTCCCGA-TTTCAAACAAGTGTTTGATGTTT 304
Query 380 TTGGAGAAATGAT-CTTTAGTTCGGAC--T-CGGAGCTATGGAAGAATCA-AAGAAAAGC 434
||||||| ||| || | | ||| | | ||| |||||||||||| |||||| ||
Sbjct 305 TTGGAGATGGGATACTC-ACAACAGACGATTCAGAGTTATGGAAGAATCTGAAGAAA-GC 362
Query 435 TGCTC-AGTTCATGCTTAACCATCACGAGTTTCAAAAG 471
| ||| ||| ||||| |||||||| | ||||||||||
Sbjct 363 TTCTCTAGTG-ATGCTCAACCATCAAGGGTTTCAAAAG 399
> AT5G51900.1 | Symbols: | Cytochrome P450 family protein | chr5:21093681-21094454
REVERSE LENGTH=729
Length=729
Score = 239 bits (129), Expect = 7e-62
Identities = 306/389 (79%), Gaps = 21/389 (5%)
Strand=Plus/Plus
Query 697 TATAGGCACATTAAACCGAAG-TTCTTGTGGAAGCTGCAAAACCGGTTTGG-GTTAGGAC 754
||||||||| ||||||| || |||| ||||||||| |||| | || | || ||| |||
Sbjct 4 TATAGGCACGTTAAACC-TAGATTCTCGTGGAAGCTACAAAGCTGGATCGGAGTTGGGA- 61
Query 755 AAGAGAAGAGGATGACCGAAGCTGATGCCACTTTTGATCGCGTTTCAGCGAAATACATAT 814
||||||| ||||| ||||||| ||||| ||||||||| || | | |||||||||||
Sbjct 62 TGGAGAAGAAGATGATAGAAGCTGGTGCCATTTTTGATCGAGTGTGTGGGAAATACATAT 121
Query 815 CAGCTAAGAGAGAAGA-G--ATAAGATCACAAG-GGAT--TGATCATCA-TTCAAATGGT 867
|||| | ||||||||| | | ||||||||||| | || | || |||| ||| | | |
Sbjct 122 CAGCCAGGAGAGAAGAGGTAAAAAGATCACAAGTGAATAATAATGATCATTTC-ATTAGA 180
Query 868 CAAAGTGA-G--GATCTTTTGACATCTCACATAAAGCTTGATACAACCAAGTACGAGCTC 924
| ||| | | ||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 181 GATAGTCATGCAAATCTTTTGACATCTCACATAAAGCTTGATACAACCCAGTACCAGCTC 240
Query 925 TTGAACCCGAGTGA-TGATAAGTTCCTCAGAGACACCATCTTAGCTTTCAAT-CTAGCTG 982
||| | || | | | |||||| ||| | ||||||| |||| ||||| | | |||||||
Sbjct 241 TTGGATCCTA-TCAATGATAAATTCTTAAGAGACAATGTCTTTGCTTT-ACTTCTAGCTG 298
Query 983 GGAGAGACACAA-TGTCTTCTGCTCTCTCTTGGTTCTTTTGGCTTCTCTCTGAAAACCCT 1041
||||||| || | || || |||||||| |||||||||||||| || | || |||||||||
Sbjct 299 GGAGAGATACCACTGCCT-CTGCTCTCACTTGGTTCTTTTGGTTTTTGTCCGAAAACCCT 357
Query 1042 CAAGTTGTAACAAAGATTCGTAAAGAGAT 1070
| ||| || || |||||||| |||||||
Sbjct 358 CTAGTGGTGACCAAGATTCGCCAAGAGAT 386
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78363050745
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5