BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg490740 Length=936 Score E Sequences producing significant alignments: (Bits) Value AT4G39610.1 | Symbols: | Protein of unknown function, DUF617 |... 1537 0.0 > AT4G39610.1 | Symbols: | Protein of unknown function, DUF617 | chr4:18393570-18394745 REVERSE LENGTH=1176 Length=1176 Score = 1537 bits (832), Expect = 0.0 Identities = 904/939 (96%), Gaps = 4/939 (0%) Strand=Plus/Plus Query 1 ATCAATTCAATAAGGAGGAGGAATAGAGAGCTAAAG-aaaa-aaaaaaGACTAGATTTCT 58 |||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| Sbjct 1 ATCAATTCAATAAGGAGGAGGAATAGAGAGCTAAAGAAAAAGAAAAAAGACTACATTTCT 60 Query 59 ACGAGGACGTTGGTTC-TTTAGTCGTCGTCGGTCGTCGAAGAAAGATTTTCTCCTTTCTT 117 || ||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct 61 ACAAGGACGTTGGTTCTTTTAGTCGTCGTCGGTCGTCGAAGAAAGATCTTCTCC-TTCTT 119 Query 118 TCTTCGCCGTACGATCGTCGTCTAATGGGAGAATCATCAAATCCAATGGCTACAAGTTCT 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 TCTTCGCCGTACGATCGTCGTCTAATGGGAGAATCATCAAATCCAATGGCTACAAGTTCT 179 Query 178 TCTTCCCCCTCCTCCTCAATTCCTCCTTCATCTCCATCACCTTCTCCGACGACCACAACC 237 |||||| |||||||||||||||||||||| |||||| |||| ||||||||| |||||||| Sbjct 180 TCTTCCTCCTCCTCCTCAATTCCTCCTTCGTCTCCAACACCCTCTCCGACGTCCACAACC 239 Query 238 ACGCCGCCACGTCAGCATCTTCTCCTCCAACCACCATCTTCAAAAAAGAAGAAAAACAGA 297 || ||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||| Sbjct 240 ACTCCGCCACGTCAACATCCTCTCCTCCAGCCACCATCTTCAAAAAAGAAGAAAAACAGA 299 Query 298 ACAAACGTTTTCAGAGTTTTACGCACCGTGTTTCGCTCTTTCCCAATCTTTACAACACCA 357 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 300 ACAAACGTTTTCAGAGTCTTACGCACCGTGTTTCGATCTTTCCCAATCTTTACAACACCA 359 Query 358 TCCGTAGCATGCAAAATCCCGGTTATACATCCCGGTTTAGGCTTACCGGATCCACATCAC 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 TCCGTAGCATGCAAAATCCCGGTTATACATCCCGGTTTAGGCTTACCGGATCCACATCAC 419 Query 418 AACACGTCAAGAATCACCGGAACATTGTTTGGATACCGTAAAGGCCGAGTAAGTCTTTCC 477 ||||||||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct 420 AACACGTCAAGAATCACCGGAACGTTATTCGGATACCGTAAAGGCCGAGTAAGTCTTTCC 479 Query 478 ATTCAAGAAAACCCTAAATGTTTACCTTCTTTAGTCGTAGAACTCGCCATGCAAACCACA 537 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 480 ATTCAAGAAAACCCTAAATGTTTACCTTCTTTAGTCGTGGAGCTCGCCATGCAAACCACA 539 Query 538 ACCCTTCAAAAAGAGCTAAGCACGGGAATGGTGAGAATAGCTCTCGAGACTGAGAAACAG 597 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 ACGCTTCAAAAAGAGCTAAGCACGGGAATGGTGAGAATAGCTCTCGAGACTGAGAAACAG 599 Query 598 CCTCGAGCAGATAATAATAACAATACAACCGAAAAGAAGACGGATATTTTGGAAGAACCG 657 |||||||| |||||||| || || |||||| |||||||| |||||||||||||||||| Sbjct 600 CCTCGAGCTGATAATAACAATTCTAAAACCGAGAAGAAGACAGATATTTTGGAAGAACCG 659 Query 658 TTATGGACAATGTATTGTAAAGGAGAGAAAACGGGTTACGGTGTGAAACGAGAAGCGACC 717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 TTATGGACAATGTATTGTAAAGGAGAGAAAACGGGTTACGGTGTGAAACGAGAAGCGACC 719 Query 718 GAAGAAGATCTTAACGTGATGGAGTTGTTACGTCCGGTTTCTATGGGAGCCGGAGTTTTA 777 |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 720 GAAGAAGATCTTAACGTGATGGAGTTGTTACGTCCGGTGTCTATGGGCGCCGGAGTTTTG 779 Query 778 CCGGGAAACTCGGAGTCGGAAGGACCCGACGGCGAAATGGCGTATATGAGAGCTTATTTT 837 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 780 CCGGGAAACTCGGAGTCGGAAGGACCCGACGGCGAAATGGCGTATATGAGAGCTTATTTT 839 Query 838 GAGAGAGTTATTGGGTCTAAAGATTCAGAGACTTTTTATATGTTGAGTCCTGAAGGGAAT 897 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 840 GAGAGAGTTATTGGGTCTAAAGATTCAGAGACTTTTTATATGTTGAGTCCTGAAGGGAAT 899 Query 898 AATGGACCCGAACTTAGCTTTTTCTTTGTGAGAGTTTGA 936 ||||||||||||||||||||||||||||||||||||||| Sbjct 900 AATGGACCCGAACTTAGCTTTTTCTTTGTGAGAGTTTGA 938 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45763307917 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5