BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490817
Length=1492
Score E
Sequences producing significant alignments: (Bits) Value
AT4G37980.1 | Symbols: ELI3-1, ELI3, ATCAD7, CAD7 | elicitor-ac... 2246 0.0
AT4G37990.1 | Symbols: ELI3-2, ELI3, ATCAD8, CAD-B2 | elicitor-... 1070 0.0
> AT4G37980.1 | Symbols: ELI3-1, ELI3, ATCAD7, CAD7 | elicitor-activated
gene 3-1 | chr4:17852441-17854500 FORWARD LENGTH=1501
Length=1501
Score = 2246 bits (1216), Expect = 0.0
Identities = 1404/1495 (94%), Gaps = 12/1495 (1%)
Strand=Plus/Plus
Query 1 ATCACACTACTACCAGATCGAGTAACCATAAGGGACCATCAATTCACGTGGACGTAGTGA 60
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 16 ATCACACTACTACCAGATCGAGTAACCATTAGGGACCATTAATTCACGTGGACGTAGTGA 75
Query 61 ATATGGTCCTTGTAAATTAATGAGTACGTAATTGTCCTCATTCACATATCGATCGGTTCC 120
||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 76 ATATGGTCCTTGTGAATTAATGAGTACGTAATTGTCCTCATTCATATATGGATCGGTTCC 135
Query 121 ACAGACAGACCTTTCCTGTATAAAATTCGACATCTTTCCTCTCATTATTATCTCTACACT 180
|| | | || ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 136 AC--A-A-ACATTTCCTGTATAAAATTCTACATCTTTCCTCTCATTATTATCTCTACACT 191
Query 181 TCTCATCTCTCAATCCCATTCGCTTATTGTTTATCCATATGGGAAAGGTTCTTGAGAAGG 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 192 TCTCATCTCTCAATCCCATTCGCTTATTATTTATCCATATGGGAAAGGTTCTTGAGAAGG 251
Query 241 AGGCGTTTGGATTAGCCGCGAAAGACGAATCGGGAATTCTTTCGCCTTTCAGTTTCTCTA 300
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 252 AGGCGTTTGGATTGGCTGCGAAAGACGAATCGGGAATTCTTTCGCCTTTCAGTTTCTCTA 311
Query 301 GAAGGGAGACAGGAGAAAAGGATGTGAGGTTCAAAGTCTTGTTCTGTGGAATTTGCCACA 360
|||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 312 GAAGGGCGACGGGTGAAAAGGATGTGAGGTTCAAAGTCTTGTTCTGTGGAATTTGCCACA 371
Query 361 CAGATCTGAGTATGGCTAAAAACGAATGGGGATTTACTACTTATCCCCTTGTCCCTGGGC 420
| |||||||||||||| |||||||||||||| || ||||||||||| |||||||||||||
Sbjct 372 CTGATCTGAGTATGGCCAAAAACGAATGGGGGTTAACTACTTATCCTCTTGTCCCTGGGC 431
Query 421 ATGAGATTGTGGGGGTGGTGACTGAAGTTGGAGCCAAAGTGACCAAATTCAACGTTGGGG 480
||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct 432 ATGAGATTGTGGGCGTGGTGACTGAAGTTGGAGCCAAAGTGAAAAAATTCAACGCTGGAG 491
Query 481 ACAAAGTCGGAGTTGGCTATATGGCCGGCTCATGCCGGTCATGTGACAGCTGCAGCGATG 540
||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||
Sbjct 492 ACAAAGTCGGAGTTGGCTATATGGCCGGCTCGTGCAGGTCATGTGACAGCTGCAATGATG 551
Query 541 GCGAAGAGAACTACTGTCCAAAGATGGTCCTAACATCCGGAGCCAAAGA-TTATGACGAT 599
|||| ||||||||||||||||||||| || |||| |||||||||||| | || |||||||
Sbjct 552 GCGACGAGAACTACTGTCCAAAGATGATCTTAACGTCCGGAGCCAAAAACTT-TGACGAT 610
Query 600 TCCATGACCCATGGTGGTTACTCCGACCACATGGTGTGTGCTGAGGATTTCATCATCCGT 659
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 611 ACCATGACCCATGGTGGATACTCCGACCACATGGTGTGTGCTGAGGATTTCATCATCCGT 670
Query 660 ATTCCTAAAAATCTCCCATTAGACGGTGCCGCACCACTACTCTGTGCCGGGGTCACGGTC 719
|||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 671 ATTCCTGACAATCTCCCATTAGACGGTGCCGCACCACTACTCTGCGCCGGGGTCACGGTC 730
Query 720 TACTCCCCGATGAAGTATCACGGGCTCGACAAGCCCGGTATGCACATTGGTGTGGTGGGA 779
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 731 TACTCCCCCATGAAGTATCACGGGCTCGACAAGCCCGGTATGCACATCGGTGTGGTGGGA 790
Query 780 CTAGGCGGTTTGGGTCATGTAGCAGTGAAATTTGCTAAGGCTATGGGTACTAAAGTTACG 839
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 791 CTAGGCGGTTTGGGCCATGTAGCAGTGAAATTTGCTAAGGCTATGGGTACTAAAGTTACG 850
Query 840 GTTATTAGTACTTCAGAGCGTAAGAGAGACGAGGCAGTTAATCGGCTTGGTGCGGATGCC 899
|||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 851 GTTATTAGTACTTCGGAGCGTAAGAGAGACGAGGCCGTTACTCGGCTTGGTGCGGATGCC 910
Query 900 TTCTTGGTGAGCCGTGACCCGAAACAAATGGAGGATGCAATGGGGACTATGGATGGTATA 959
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 911 TTCTTGGTGAGCCGTGACCCGAAACAAATGAAGGATGCAATGGGGACTATGGATGGTATC 970
Query 960 ATTGATACCGTATCTGCAACCCATCCGCTTCTTCCGCTGCTTGGTTTGCTTAAAAATAAG 1019
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 971 ATTGATACCGTATCTGCGACCCATCCACTTCTTCCGCTGCTTGGTTTGCTTAAAAATAAG 1030
Query 1020 GGAAAACTTGTTATGGTTGGTGCACCAGCGGAACCGCTCGAGCTTCCTGTTATGCCTCTC 1079
||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||
Sbjct 1031 GGAAAACTTGTTATGGTTGGTGCACCAGCAGAACCGCTCGAGCTTCCTGTTTTTCCTCTC 1090
Query 1080 ATCTTTGGGCGGAAGATGGTGGTGGGAAGTATGGTAGGAAGTATAAAGGAGACGCAAGAG 1139
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 1091 ATCTTTGGGCGGAAGATGGTGGTGGGTAGTATGGTAGGAGGTATAAAGGAGACGCAAGAG 1150
Query 1140 ATGGTGGACTTGGCCGGAAAACACAATGTCACTGCGGATATTGAGCTCATCTCTGCGGAT 1199
|||||||| ||||| ||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 1151 ATGGTGGATTTGGCTGGAAAACACAACATCACGGCGGATATTGAGCTCATCTCTGCGGAT 1210
Query 1200 TATGTCAACACCGCCATGGAACGGCTTGCAAAGGGTGACGTTAAGTACCGATTTGTGATT 1259
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1211 TATGTCAACACCGCCATGGAACGGCTTGCAAAGGCTGACGTTAAGTACCGATTTGTGATT 1270
Query 1260 GACGTTGCGAACACAATGAAGCCAACTTCTTAATTAGAAAGCTAAAGAATTGAATTTCCC 1319
|| ||||| ||||| |||||||||||| ||||| ||||||||| ||||||||||| ||||
Sbjct 1271 GATGTTGCCAACACGATGAAGCCAACTCCTTAACTAGAAAGCTTAAGAATTGAATATCCC 1330
Query 1320 CAAAGCttttttcatgttttttgcttgtttggttgatgttgtttgctgacgactttttgA 1379
||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||| ||
Sbjct 1331 CAAAGCTTTTTTCATGTTTTT-GCTTGTTTGTTTGATGTTGTTTGCTGGCGACTTTGTGT 1389
Query 1380 GTAGTACTACCA-A-TGCATGTACTTTATCAATTCAATAAACTTGAATATTGTATTTAAT 1437
|||||| ||||| | |||||||||||||||| || |||||||||||||||||||||||||
Sbjct 1390 GTAGTATTACCACACTGCATGTACTTTATCAGTTGAATAAACTTGAATATTGTATTTAAT 1449
Query 1438 AAGCTATATATATGATTAGATTTTGGGGAAGCTTAAGTAAAATTTACTCGGATTG 1492
||||||| || || | |||||||||||||| || | ||||||||| || |||||
Sbjct 1450 AAGCTATCTACAT--T-AGATTTTGGGGAAGTTTGATTAAAATTTATTCCGATTG 1501
> AT4G37990.1 | Symbols: ELI3-2, ELI3, ATCAD8, CAD-B2 | elicitor-activated
gene 3-2 | chr4:17855876-17857639 FORWARD LENGTH=1419
Length=1419
Score = 1070 bits (579), Expect = 0.0
Identities = 971/1156 (84%), Gaps = 43/1156 (4%)
Strand=Plus/Plus
Query 206 ATTGTTT-ATCCA-TATGGGAAAGGTTCTTGAGAAGGAGGCGTTTGGATTAGCCGCGAAA 263
||||||| ||| | |||||||||||||||| |||| |||||||| |||||||||||||||
Sbjct 74 ATTGTTTGATCGATTATGGGAAAGGTTCTTCAGAAAGAGGCGTTCGGATTAGCCGCGAAA 133
Query 264 GACGAA-TCGGGAATTCTTTCGCCTTTCAGTTTCTCTAGAAGGGAGACAGGAGAAAAGGA 322
||| || || ||| |||| ||||||||||||||| |||||||||| ||||||||||||||
Sbjct 134 GAC-AATTCCGGAGTTCTCTCGCCTTTCAGTTTCACTAGAAGGGAAACAGGAGAAAAGGA 192
Query 323 TGTGAGGTTCAAAGTCTTGTTCTGTGGAATTTGCCACACAGATCTG-AGTATGGCT-AAA 380
||||||||||||||| || || ||||||||||| ||| | ||| || | ||||| | ||
Sbjct 193 TGTGAGGTTCAAAGTGTTATTTTGTGGAATTTGTCACTCTGATTTGCA-TATGG-TCAAG 250
Query 381 AACGAATGGGG-ATTTACTACTTATCCCCTTGTCCCTGGGCATGAGATTGTGGGGGTGGT 439
||||| ||||| || | |||||||||| |||||||| ||||||||||| ||||| |||||
Sbjct 251 AACGAGTGGGGAATGT-CTACTTATCCTCTTGTCCCAGGGCATGAGATCGTGGGCGTGGT 309
Query 440 GACTGAAGTTGGAGCCAAAGTGACCAAATTCAACGTTGGGGACAAAGTCGGAGTTGGCTA 499
||||||||| |||||||||||||| |||||||| || || |||||||||||||| |
Sbjct 310 GACTGAAGTCGGAGCCAAAGTGACTAAATTCAAAACCGGAGAAAAAGTCGGAGTTGGGTG 369
Query 500 TATGGCCGGCTCATGCCGGTCATGTGACAGCTGCAGCGATGGCGA-AGAGAACTACTGTC 558
| ||| | |||| ||| |||||||||||||||||| ||| || | || ||||| ||||
Sbjct 370 TTTGGTCAGCTCGTGCGGGTCATGTGACAGCTGCACCGAAGG-TATGGAAAACTATTGTC 428
Query 559 CAAAGAT-GGTCCTAACATCCGGA-GCCAAAG-ATTATGACGATTCCATGACCCATGGTG 615
|||| || ||| ||| | |||| || | | || ||| | |||| || | ||||
Sbjct 429 CAAA-ATCAATCCAAACGTACGGATTCC--CGTACTACGACAACACCATAACATACGGTG 485
Query 616 GTTACTCCGACCACATGGTGTGTGCTGAGG-A--TTTCATCATCCGTATTCCTA-AAAAT 671
||||||||||||||||||| | ||| |||| | |||| ||||||||||||| | | |||
Sbjct 486 GTTACTCCGACCACATGGT-T-TGC-GAGGAAGGTTTCGTCATCCGTATTCC-AGACAAT 541
Query 672 CTCCCATTAGACGGTGCCGCACCACTACTCTGTGCCGGGGTCACGGTCTACTCCCCGATG 731
||||| || |||| |||||||| || ||||||||||| |||||||||| ||||| |||
Sbjct 542 CTCCCCTTGGACGCCGCCGCACCGCTCCTCTGTGCCGGTATCACGGTCTATTCCCCTATG 601
Query 732 AAGTATCACGGGCTCGACAAGCCCGGTATGCACATTGGTGTGGTGGGACTAGGCGGTTTG 791
|||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||
Sbjct 602 AAGTATCACGGGCTCGACAAACCCGGTATGCACATCGGTGTGGTAGGATTAGGCGGTTTA 661
Query 792 GGTCATGTAGCAGTGAAATTTGCTAAGGCTATGGGTACTAAAGTTACGGTTATTAGTACT 851
|||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 662 GGTCATGTAGGAGTGAAATTTGCCAAGGCTATGGGTACTAAGGTTACGGTTATTAGTACT 721
Query 852 TCAGAGCGTAAGAGAGACGAGGCAG-TTAATCGGCTTGGTGCGGATGCCTTCTTGGTGAG 910
|| ||| |||||||| ||||| | |||||||||||||||||||||| |||||||||||
Sbjct 722 TCGGAGAAAAAGAGAGATGAGGC-GATTAATCGGCTTGGTGCGGATGCTTTCTTGGTGAG 780
Query 911 CCGTGACCCGAAACAAATGGAGGATGCAATGGGGACTATGGATGGTATAATTGATACCGT 970
||||||||| ||||| || ||||||||||||| ||||||||||||||||||||||||||
Sbjct 781 CCGTGACCCAAAACAGATTAAGGATGCAATGGGTACTATGGATGGTATAATTGATACCGT 840
Query 971 ATCTGCAACCCATCCGCTTCTTCCGCTGCTTGGTTTGCTTAAAAATAAGGGAAAACTTGT 1030
||||| || ||| | ||||||||| |||| |||||||| || ||||||||||||||||
Sbjct 841 CTCTGCGACTCATTCACTTCTTCCGTTGCTCGGTTTGCTGAAGCATAAGGGAAAACTTGT 900
Query 1031 TATGGTTGGTGCACCAGCGGAA-CCGCTCGAGCTTCCTGTTATGCCTCTCATCTTTGGGC 1089
||||||||||||||| | | || || |||||||| ||||| |||||||||||||||| |
Sbjct 901 TATGGTTGGTGCACCCGAG-AAGCCACTCGAGCTACCTGTCATGCCTCTCATCTTTGAGA 959
Query 1090 GGAAGATGGTGGTGGGAAGTATGGTAGGAAGTATAAAGGAGACGCAAGAGATGGTGGACT 1149
|||||||||| ||||||||||| ||||| | ||||| ||||| || || ||| | || |
Sbjct 960 GGAAGATGGTAATGGGAAGTATGATAGGAGGGATAAAAGAGACCCAGGAAATGATAGA-T 1018
Query 1150 -TGGCCGGAAAACACAATGTCACTGCGGATATTGAGCTCATCTCTGCGGATTATGTCAAC 1208
||||||| |||||||| ||||||||||||||||||| |||||||| ||||||||||||
Sbjct 1019 ATGGCCGGGAAACACAACATCACTGCGGATATTGAGCTTATCTCTGCCGATTATGTCAAC 1078
Query 1209 ACCGCCATGGAACGGCTTGC-AAAGGGTGACGTTAAGTACCGATTTGTGATTGACGTTGC 1267
||||||||||||||||| | |||| ||||||| |||||| ||||||||||| |||||
Sbjct 1079 ACCGCCATGGAACGGCTAGAGAAAGCC-GACGTTAGGTACCGCTTTGTGATTGATGTTGC 1137
Query 1268 GAACACAATGAAGCC-AACTTCTTAATT-AGAAAGCTA-AAGAATTGAATTTCCCCAAA- 1323
|||||| ||||||| || | || |||| | || | | ||| ||| || |||| ||||
Sbjct 1138 CAACACATTGAAGCCTAA-TCCT-AATTTATAA-GTTTTAAGCATTAAACTTCCTCAAAT 1194
Query 1324 GCtt-ttttcatgttt 1338
| || ||||| |||||
Sbjct 1195 G-TTATTTTCTTGTTT 1209
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73593998970
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5