BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490852
Length=1924
Score E
Sequences producing significant alignments: (Bits) Value
AT4G37670.2 | Symbols: NAGS2 | N-acetyl-l-glutamate synthase 2 ... 2861 0.0
AT2G22910.1 | Symbols: NAGS1 | N-acetyl-l-glutamate synthase 1 ... 1544 0.0
AT4G37660.1 | Symbols: | Ribosomal protein L12/ ATP-dependent ... 126 7e-28
> AT4G37670.2 | Symbols: NAGS2 | N-acetyl-l-glutamate synthase
2 | chr4:17696059-17698843 REVERSE LENGTH=1969
Length=1969
Score = 2861 bits (1549), Expect = 0.0
Identities = 1754/1854 (95%), Gaps = 10/1854 (1%)
Strand=Plus/Plus
Query 1 ATGGAGCAAGGAGCTTTGGTGGGTACTTC-T-T-CTTCAAGCTGCTATGTTCCTTTCCAA 57
||||||| ||||||||| |||||| |||| | | |||| |||| ||||||||||| |||
Sbjct 8 ATGGAGCGAGGAGCTTTAGTGGGTTCTTCTTCTACTTCTAGCTACTATGTTCCTTACCAC 67
Query 58 TTTCGCCAATCAAAGACG-TTTTTTCCGTCATTCAAACCGAAAACTAAGCTAAACCCTAT 116
||||||||||||||| || ||||| ||||||||||||| |||| ||||||||||||||
Sbjct 68 TTTCGCCAATCAAAGTCGAATTTTT-CGTCATTCAAACCAAAAAATAAGCTAAACCCTAC 126
Query 117 TCAATTCCGGTTTAACTGTCCATGGTTTAAGCTGGTTAGTTCTGTAACGGCGGCGAAATG 176
||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||
Sbjct 127 TCAATTCCGGTTTAACTGTTCATGGTTTAAGCCGGTTAGTTCTATAACGGCGGCGAAATG 186
Query 177 CAATATGTTTGACTACGCGGTGAGTGCAGACGGCGATGTGGAGGCTGAGCATCCGGTAGA 236
||||||||||||||||||||||| ||||| |||||||||||||||||||||||| || ||
Sbjct 187 CAATATGTTTGACTACGCGGTGACTGCAGCCGGCGATGTGGAGGCTGAGCATCCAGTTGA 246
Query 237 CGACAAACAGTTTGTGCGTTGGTTTCGTGAAGCCTGGCCTTATCTGTGGGCTCACCGTGG 296
|||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct 247 CGACAAACAGTTTGTGCGTTGGTTCCGTGAAGCATGGCCTTATCTTTGGGCTCACCGTGG 306
Query 297 CTGCACATTCGTCGTTATTATCTCCGGCGAGATCATCGCCGGCTCTTCTTGTGATCCCAT 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 307 CTGCACATTCGTCGTTATTATCTCCGGCGAGATCATCGCCGGCTCTTCTTGTGATGCCAT 366
Query 357 TTTGAAGGACATAGCGTTTCTTCATCATCTAGGAATAAGGTTTGTTTTAGTTCCTGGAAC 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 367 TTTGAAGGACATAGCGTTTCTTCATCATCTAGGAATAAGGTTTGTTTTAGTTCCTGGAAC 426
Query 417 TCAAGATCAAATCGACGAGCTTCTGTCTGAGAGAGGACGCGAGGCCACATATGTGGGTCG 476
||| || ||||||||| |||||||| ||||||||||||||||||| || |||||||| ||
Sbjct 427 TCAGGAGCAAATCGACCAGCTTCTGGCTGAGAGAGGACGCGAGGCTACGTATGTGGGACG 486
Query 477 TTACAGAGTAACGGATGCAGCATCTTTGCAGGCTGCCAAAGAAGCTGCAGGAGCAATATC 536
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 487 TTACAGAGTAACGGATGCAGCATCTTTGCAGGCTGCTAAAGAAGCTGCAGGAGCAATATC 546
Query 537 AGTGATGCTTGAGGCCAAACTATCTCCTGGACCTTCCATTTGCAATATCCGTAGACACGG 596
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||
Sbjct 547 AGTGATGCTTGAGGCCAAATTATCTCCTGGACCTTCTATTTGCAATATCCGTAGACATGG 606
Query 597 TGATCGTAGTCGTTTACATGATATAGGTGTTAGGGTTGATACTGGTAACTTCTTTGCAGC 656
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 607 TGATCGTAGTCGTTTACATGATATAGGTGTTAGGGTTGATACCGGTAACTTCTTTGCAGC 666
Query 657 AAAAAGAAGAGGTGTTGTTGACGGTGTTGATTTTGGAGCGACAGGTGAGGTAAAGAAGAT 716
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 667 AAAAAGAAGAGGTGTTGTTGATGGTGTTGATTTTGGAGCGACTGGTGAGGTAAAGAAGAT 726
Query 717 AGATGTAGATCGGATTTGTGAGAGGCTTGACGGTGGTTCTATAGTTTTGTTGAGGAACTT 776
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 727 AGATGTAGATCGGATTTGTGAGAGGCTTGACGGTGGTTCTGTAGTTTTGTTGAGGAACTT 786
Query 777 GGGCCACTCTAGCTCCGGAGAAGTCTTAAATTGCAATACCTATGAGGTTGCTACAGCTTG 836
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 787 GGGCCACTCGAGCTCCGGAGAAGTCTTAAATTGCAATACCTATGAGGTTGCTACAGCTTG 846
Query 837 TGCTTTAGCTATAGGAGCAGATAAGCTAATTTGCATAATGGACGGTCCAATTCTTGATGA 896
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 847 TGCTTTAGCTATAGGAGCAGATAAGCTTATTTGCATAATGGACGGCCCAATTCTTGATGA 906
Query 897 GAGTGGACATCTTATTCGTTTCTTGACACTTCAAGAAGCAGATATGTTAGTTAGAAAACG 956
||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 907 GAGTGGACATCTTATTCATTTCTTGACACTTCAAGAAGCAGATATGTTAGTTCGAAAACG 966
Query 957 TGCTCAACAGAGTGACATAGCTGCAAATTACGTGAAGGCCGTTGGAGATGGAAGTATGAC 1016
|| ||||| || |||||||||||||||||||| || ||||||||||||||||| ||| |
Sbjct 967 GGCACAACAAAGCGACATAGCTGCAAATTACGTAAAAGCCGTTGGAGATGGAAGCATGGC 1026
Query 1017 TTATCCCGAACCTCCTAACAACACCAGCAGTAACATTACTTCTCCTCAAAACGGGAGAGC 1076
|||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||
Sbjct 1027 TTATCCCGAACCTCCTAACAACACCAATGGTAATATTACTTCTGCTCAAAACGGGAGAGC 1086
Query 1077 AG---CATTTTGGGGAAACGGAAACCACACTCCGGTCTTTCAGAACGGTGTTGGATTTGA 1133
| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1087 CGTTTCATTTTGGGGAAACGGAAACCACACTCCGATCTTTCAGAACGGTGTTGGATTTGA 1146
Query 1134 CAACGGAAACGGATTGTGGTCTGGTGAGCAAGGTTTTGCTATTGGTGGTGAGGAAAGATT 1193
||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||
Sbjct 1147 CAACGGAAACGGATTGTGGCCTTGTGAGCAAGGTTTTGCTATTGGTGGTGAAGAAAGATT 1206
Query 1194 AAGCCGCTTAAACGGTTATCTTTCTGAATTGGCTGCTGCGGCGTTCGTCTGCAGAGGTGG 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1207 AAGCCGCTTAAACGGTTATCTTTCTGAATTGGCTGCTGCGGCGTTCGTCTGCAGAGGTGG 1266
Query 1254 AGTCAAAAGAGTTCACTTGTTGGATGGTACTATAAGTGGAGTTCTATTGCTGGAGCTTTT 1313
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1267 AGTCAAAAGAGTTCACTTGTTGGATGGTACTATAAGTGGAGTTCTATTGTTGGAGCTTTT 1326
Query 1314 CAAAAGAGATGGAATGGGAACTATGGTTGCTAGTGATGTTTACGAAGGAACCCGGGATGC 1373
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1327 CAAAAGAGATGGAATGGGAACTATGGTTGCTAGTGATGTTTACGAAGGAACCCGTGATGC 1386
Query 1374 CAGAGTGGAAGATCTTGAAGGAATTAGACATATAATCAAACCCTTGGAGGAATCAGGGAT 1433
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1387 CAGAGTGGAAGATCTAGCAGGAATTAGACATATAATCAAACCCTTGGAGGAATCAGGGAT 1446
Query 1434 TCTAGTTCGCAGAACTGATGAGGAGTTACTGCGAGCCTTGGATTCATTTGTGGTTGTGGA 1493
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1447 TTTAGTTCGCAGAACTGATGAGGAGTTACTGCGAGCTTTGGATTCATTTGTGGTTGTGGA 1506
Query 1494 AAGGGAAGGTCAGATCATCGCTTGTGCGGCTTTGTTTCCGTTCTTTCAA-GACAAATGCG 1552
||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 1507 AAGGGAAGGACAGATCATCGCTTGTGCGGCTTTGTTTCCGTTCTT-CAAAGACAAATGCG 1565
Query 1553 GAGAAGTTGCAGCAATCGCGGTTGCATCAGATTGTCGCGGTCAAGGCCAAGGAGATAAAT 1612
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1566 GAGAAGTTGCTGCAATCGCGGTTGCATCAGATTGTCGCGGTCAAGGCCAAGGCGATAAAT 1625
Query 1613 TGCTCGATTACATAGAGAAGAAAGCTTCGTCTCTCGGGTTAGAAAAGCTGTTCCTACTCA 1672
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 1626 TGCTCGATTACATAGAGAAGAAAGCTTCATCTCTCGGGTTAGAGAAGCTGTTCCTACTCA 1685
Query 1673 CAACCCGAACAGCAGACTGGTTCGTGAGACGCGGGTTCCAAGAATGTTCAATCGAGATCA 1732
|||| |||||||| || ||||| |||||||| |||||||||||||| ||||| |||||||
Sbjct 1686 CAACGCGAACAGCGGATTGGTTTGTGAGACGAGGGTTCCAAGAATGCTCAATAGAGATCA 1745
Query 1733 TACCAGAGAGTAGAAGACAGAGAATCAATCTATCTAGAAAATCAAAGTATTACACGAAGA 1792
||||||||||||||||||| ||||||||||| || ||||| ||||||||||||| |||||
Sbjct 1746 TACCAGAGAGTAGAAGACAAAGAATCAATCTTTCAAGAAATTCAAAGTATTACATGAAGA 1805
Query 1793 AACTTCTACCTGATAGAAGTGGCATTTCAGTTCTGAGAATATAAGCAAGAAGAT 1846
| || | |||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct 1806 AGCTAATCCCTGATAGAAGTGGCATTTCAGTTATGAGAATCTAAGCAAGAAGAT 1859
Score = 126 bits (68), Expect = 7e-28
Identities = 76/80 (95%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 1845 ATTGTAAAAACAATATTCATCATTCTCAAAAACTTTCAAGATTGTTTGATTTCGAAAAAT 1904
||||||||| |||||||||| |||||||||| ||||||| ||||||||||||||||||||
Sbjct 1890 ATTGTAAAATCAATATTCATAATTCTCAAAAGCTTTCAACATTGTTTGATTTCGAAAAAT 1949
Query 1905 TCAAAATACTTATTTTGATC 1924
||||||||||||||||||||
Sbjct 1950 TCAAAATACTTATTTTGATC 1969
> AT2G22910.1 | Symbols: NAGS1 | N-acetyl-l-glutamate synthase
1 | chr2:9749869-9752863 FORWARD LENGTH=2075
Length=2075
Score = 1544 bits (836), Expect = 0.0
Identities = 1363/1613 (85%), Gaps = 53/1613 (3%)
Strand=Plus/Plus
Query 237 CGACAAACAGTTTGTGCGTTGGTTTCGTGAAGCCTGGCCTTATCTGTGGGCTCACCGTGG 296
||| || || |||||||| |||||||||||||| ||||||||| |||||||||| ||| |
Sbjct 338 CGATAAGCAATTTGTGCGGTGGTTTCGTGAAGCTTGGCCTTATTTGTGGGCTCATCGTAG 397
Query 297 CTGCACATTCGTCGTTATTATCTCCGGCGA-GATCATCGCCGGCTCTTCTTGTGATCCCA 355
||| || |||||||||| |||||||||||| | || | | |||| ||| |||||||| |
Sbjct 398 CTGTACCTTCGTCGTTACTATCTCCGGCGATG-TCTTAGACGGCCCTTATTGTGATCTCG 456
Query 356 TTTTGAAGGACATAGCGTTTCTTCATCATCTAGG-AATAAGGTTTGTTTTAGTTCCTGGA 414
|||| ||||||||||| |||||||||||||| || | ||| ||||||| |||||||||||
Sbjct 457 TTTTAAAGGACATAGCATTTCTTCATCATCTGGGCATTAA-GTTTGTTCTAGTTCCTGGA 515
Query 415 ACTCAAGAT-CAAATCGACGAGCTTCT-GTCTGAGAGAGGACGCGAGGCC-ACATATGTG 471
||||||| | ||||||||| ||||||| | |||||||||||||||| ||| ||||||||
Sbjct 516 ACTCAAG-TGCAAATCGACCAGCTTCTAG-CTGAGAGAGGACGCGA-GCCTACATATGTA 572
Query 472 GGTCGTTACAGAGTAACGGA-TGCAGCATCT-TTGCAGGCTGCCAAAGAAGCTGCAGGAG 529
|||||||||||||| || || | |||||||| || |||||||| || |||||||| ||||
Sbjct 573 GGTCGTTACAGAGTCACAGACT-CAGCATCTCTT-CAGGCTGCTAAGGAAGCTGCGGGAG 630
Query 530 CAATATCAGTGATGCTTGAGGCCAAACTATCTCCTGGACCTTCCATTTGCAATATCCGTA 589
||||||| || ||| ||||||||||||||||||| |||||||| |||| |||||| ||
Sbjct 631 CAATATCTGTAATGATTGAGGCCAAACTATCTCCCGGACCTTCTATTTACAATATACGCC 690
Query 590 GACACGGTGATCGTAGTCGTTTACATGATATAGGTGTTAGGGTTGATACTGGTAACTTCT 649
|||| |||||| |||||||||| ||||| | ||| |||||||| ||||||||||||||||
Sbjct 691 GACATGGTGATAGTAGTCGTTTGCATGAAACAGGCGTTAGGGTCGATACTGGTAACTTCT 750
Query 650 TTGCAGCAAAAAGAAGAGGTGTTGTTGACGGTGTTGATTTTGGAGCGACAGG-TGAGGTA 708
|||||||||| ||||||||||||||||| ||||||||||||||||| || || | | ||
Sbjct 751 TTGCAGCAAAGAGAAGAGGTGTTGTTGATGGTGTTGATTTTGGAGCAACTGGTTTA-GTG 809
Query 709 AAGAAGATAGATGTAGATCGGATTTGTGAGAGGCTTGACGGTGGTTCTATAGTTTTGTTG 768
|||||||||||||||||||| || ||||||||||||| |||||||| ||||||| |||
Sbjct 810 AAGAAGATAGATGTAGATCGAATCCGTGAGAGGCTTGATAGTGGTTCTGTAGTTTTATTG 869
Query 769 AGGAACTTGGGCCACTCTAGCTCCGGAGAAGTCTTAAATTGCAATACCTATGAGGTTGCT 828
|||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 870 AGGAACTTGGGCCATTCCAGCACCGGAGAAGTCTTAAATTGCAATACCTATGAGGTTGCT 929
Query 829 ACAGCTTGTGCTTTAGCTATAGGAGCAGATAAGCTAATTTGCATAATGGACGGTCCAATT 888
||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||| ||
Sbjct 930 ACAGCATGTGCTTTAGCTATAGGAGCAGATAAGCTTATTTGCATAATGGATGGTCCAGTT 989
Query 889 CTTGATGAGAGTGGACATCTTATTCGTTTCTTGACACTTCAAGAAGCAGATATGTTAGTT 948
|||||||||| |||||||||| |||| |||||||| ||||| |||||||||| |||||
Sbjct 990 CTTGATGAGAATGGACATCTTGTTCGGTTCTTGACTCTTCAGGAAGCAGATACATTAGTC 1049
Query 949 AGAAAACGTGCTCAACAGAGTGACATAGCTGCAAATTACGTGAAGGCCGTTGGAGATGGA 1008
|||||||| || || || || || || ||||| |||||||||||||| ||||| ||||||
Sbjct 1050 AGAAAACGGGCACAGCAAAGCGAGATCGCTGCCAATTACGTGAAGGCTGTTGGGGATGGA 1109
Query 1009 AGTAT--G-ACTTATCCCGAACCTCCTAACAACACCAGCAGTAACATTACTTCTCCTCAA 1065
| || | | || ||| ||||||| | ||| | ||| | || |||| |||
Sbjct 1110 GGCATAAGTAGTTTTCCTGAACCTCTTGGTTACAAT-G--GTATGGTGACGACTCC-CAA 1165
Query 1066 -AA-C-----GGGAGAGCAGCATTTTGGGGAAACGGAAACCACACTCCGGTCTTTCAGAA 1118
|| | |||||| | | |||| ||| ||| || | || |||| |||||||||
Sbjct 1166 CAATCATATTGGGAGACC-G-ATTT-GGG-AAA---AA-CT-CAGTCCGACCTTTCAGAA 1216
Query 1119 CGGTGTTGGATTTGACAACGGAAACGGATTGTGGTCTGGTGAGCAAGGTTTTGCTATTGG 1178
||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct 1217 TGGTGTTGGATTTGACAACGGAAATGGGTTGTGGTCTGGGGAGCAAGGTTTTGCTATTGG 1276
Query 1179 TGGTGAGGAAAGA-TTAAGCCGCTTAAACGGTTATCTTTCTGAATTGGCTGCTGCGGCGT 1237
|||||||| ||| ||| |||| || || || ||||| |||||| ||||||| || ||||
Sbjct 1277 CGGTGAGGAGAGAATTA-GCCGTTTGAATGGATATCTCTCTGAACTGGCTGCAGCAGCGT 1335
Query 1238 TCGTCTGCAGAGGTGGAGTCAAAAGAGTTCACTTGTTGGATGGTACTATAAGTGGAGTTC 1297
|||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1336 TCGTTTGCAGAGGTGGTGTCAAAAGAGTTCACTTATTGGATGGTACTATAAGTGGAGTGC 1395
Query 1298 TATTGCTGGAGCTTTTCAAAAGAGATGGAATGGGAACTATGGTTGCTAGTGATGTTTACG 1357
||||| |||||||||||||||||||||||||||| |||||||| || |||||||| || |
Sbjct 1396 TATTGTTGGAGCTTTTCAAAAGAGATGGAATGGGGACTATGGTGGCAAGTGATGTATATG 1455
Query 1358 AAGGAACCCGGGATGCCAGAGTGGAAGATCTTGAAGGAATTAGACATATAATCAAACCCT 1417
|||||| |||||| || | |||||||||||||| ||||| ||||| ||||||||||||
Sbjct 1456 AAGGAAACCGGGAGGCGAAAGTGGAAGATCTTGCTGGAATAAGACAAATAATCAAACCCC 1515
Query 1418 TGGAGGAATCAGGGA-TTCTAGTTCGCAGAACTGATGAGGAG-TTACTGCGAGCCTTGGA 1475
|||| ||||| ||| || ||||||| ||||||||||||||| || |||||||| |||||
Sbjct 1516 TGGAAGAATCTGGGGCTT-TAGTTCGTAGAACTGATGAGGAGCTT-CTGCGAGCTTTGGA 1573
Query 1476 TTCATTTGTGGTTGTGGAAAGGGAAGGTCAGATCATCGCTTGTGCGGCTTTGTTTCCGTT 1535
||| ||||||||||||||||||||||| || || |||||||| ||||||||||| || ||
Sbjct 1574 TTCGTTTGTGGTTGTGGAAAGGGAAGGACATATTATCGCTTGCGCGGCTTTGTTCCCTTT 1633
Query 1536 CTTTCAAGACAAATGCGGAGAAGTTGCAGCAATCGCGGTTGCATCAGATTGTCGCGGTCA 1595
|||| |||| ||||| |||||||||||||| ||||| |||||||||||||| || || ||
Sbjct 1634 CTTTGAAGAAAAATGTGGAGAAGTTGCAGCTATCGCAGTTGCATCAGATTGCCGTGGACA 1693
Query 1596 AGGCCAAGGAGATAAATTGCTCGATTACATAGAGAAGAAAGCTTC-GTCTCTCGGG-TTA 1653
|||||| ||||||||||||||||||||||| ||||||||||| || | |||| || ||
Sbjct 1694 AGGCCAGGGAGATAAATTGCTCGATTACATTGAGAAGAAAGCGTCAG-CTCTTGGACTT- 1751
Query 1654 GAAAAGCTGTTCCTACTCACAACCCGAACAGCAGACTGGTTCGTGAGACGCGGGTTCCAA 1713
|| | ||| || || || ||||| |||| || |||||||| |||||||||||||| ||
Sbjct 1752 GAGATGCTATTTCTGCTGACAACGAGAACCGCGGACTGGTTTGTGAGACGCGGGTTTCAG 1811
Query 1714 GAATGTTCAATCGAGATCATACCAGAGAGTA-GAAGACAGAGAATCAATCTATCTAGAAA 1772
|||||| |||||||||| ||||||||| | | || | | ||||||||||| || || |
Sbjct 1812 GAATGTCCAATCGAGATGATACCAGAG-GCAAGACGGGAAAGAATCAATCTTTCGAGGAG 1870
Query 1773 ATCAAAGTATTACACGAAGAAACT-TCTACCTGATAGAAGTGGCATTTCAGTT 1824
|||||||||||||| |||||| || | | || || || ||||| ||||| |||
Sbjct 1871 ATCAAAGTATTACATGAAGAAGCTGT-TGCCAGACAGGAGTGGAATTTCTGTT 1922
> AT4G37660.1 | Symbols: | Ribosomal protein L12/ ATP-dependent
Clp protease adaptor protein ClpS family protein | chr4:17695496-17696270
FORWARD LENGTH=775
Length=775
Score = 126 bits (68), Expect = 7e-28
Identities = 76/80 (95%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 1845 ATTGTAAAAACAATATTCATCATTCTCAAAAACTTTCAAGATTGTTTGATTTCGAAAAAT 1904
||||||||| |||||||||| |||||||||| ||||||| ||||||||||||||||||||
Sbjct 643 ATTGTAAAATCAATATTCATAATTCTCAAAAGCTTTCAACATTGTTTGATTTCGAAAAAT 584
Query 1905 TCAAAATACTTATTTTGATC 1924
||||||||||||||||||||
Sbjct 583 TCAAAATACTTATTTTGATC 564
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95280634410
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5