BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg490888
Length=1553
Score E
Sequences producing significant alignments: (Bits) Value
AT4G37320.1 | Symbols: CYP81D5 | cytochrome P450, family 81, su... 2405 0.0
AT4G37370.1 | Symbols: CYP81D8 | cytochrome P450, family 81, su... 538 6e-152
AT4G37432.1 | Symbols: | other RNA | chr4:17597179-17598690 RE... 69.4 1e-10
AT4G37430.1 | Symbols: CYP91A2, CYP81F1 | cytochrome P450, fami... 69.4 1e-10
AT4G37400.1 | Symbols: CYP81F3 | cytochrome P450, family 81, su... 60.2 6e-08
> AT4G37320.1 | Symbols: CYP81D5 | cytochrome P450, family 81,
subfamily D, polypeptide 5 | chr4:17559580-17561727 REVERSE
LENGTH=1687
Length=1687
Score = 2405 bits (1302), Expect = 0.0
Identities = 1455/1530 (95%), Gaps = 6/1530 (0%)
Strand=Plus/Plus
Query 1 GAAAGACCAAAAAAC-AAAGAAAGCAATCAACAAGAAAATGGACATCACCCAAATCCTGC 59
|||| ||| |||||| |||| ||||||||||||||||||||||| ||||||||||||| |
Sbjct 1 GAAAAACCCAAAAACAAAAG-AAGCAATCAACAAGAAAATGGACCTCACCCAAATCCTAC 59
Query 60 TCCTCTCCTTTCTCTTTCTCTCTATCTCTATCAAACTCTTGCTCACAAAATCTGACCGGA 119
|||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||
Sbjct 60 TCCTCTCCTTTCTCTTTCTCACTATCTCCATCAAACTCTTGCTCACAAAATCTAACCGGA 119
Query 120 AACCTAATCTTCCTCCTTCTCCGGCTTACCCTTTACCGGTTATCGGCCACCTCCACCTTC 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 120 AACCTAATCTTCCTCCTTCTCCGGCTTACCCTTTACCGGTTATCGGCCACCTCCACCTCC 179
Query 180 TCAAGCAACCGGTCCACCGAACATTCCTCTCCATCTCTCAGTCCCTCAGAAATGCTCCGA 239
||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||| |
Sbjct 180 TCAAGCAACCGGTCCACCGAACATTCCACTCCATCTCTAAGTCCCTTGGAAATGCTCCAA 239
Query 240 TCTTCTACCTCCGCCTGGGAAACCGCCTCGTTTACGTTATCTCCTCACATTCTATAGCCG 299
||||| ||||||||||||||||||||||||||||||| ||||||||||| || |||||||
Sbjct 240 TCTTCCACCTCCGCCTGGGAAACCGCCTCGTTTACGTCATCTCCTCACACTCCATAGCCG 299
Query 300 AAGAATGTTTCACCAAAAACGACGTCGTTCTTGCGAATCGTCCTGATATCATCATGGCCA 359
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 300 AAGAATGTTTCACCAAAAACGACGTCGTTCTTGCGAACCGTCCTGATATCATCATGGCCA 359
Query 360 AACACGTCGGCTATAACTTTACCAATATGATTGCAGCACCTTACGGCGACCACTGGCGTA 419
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |
Sbjct 360 AACACGTCGGCTATAACTTTACCAATATGATTGCAGCATCTTACGGCGACCACTGGAGGA 419
Query 420 ACCTCCGCCGCATCGCCGCCGTCGAGATTTTTTCTTCTCATAGAATCAGTA-CTTTTAAG 478
| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 420 ATCTCCGCCGCATCGCCGCCGTCGAGATATTTTCTTCTCATAGAATCAGTACCTTTT-CT 478
Query 479 TCTATCCGTAAAGACGAGATCCGACGGCTCATAACACTTCTCTCTAGAGACTCCTTACAC 538
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 479 TCTATCCGTAAAGACGAGATCCGACGGCTCATAACACATCTCTCTAGAGACTCCTTGCAC 538
Query 539 GGATTTGTTGAAGTGGAGTTGAAATCATTATTAGCCAACTTGGCATTCAACAACATCATC 598
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 539 GGATTTGTTGAAGTGGAGTTGAAATCGTTATTAACCAACTTGGCATTCAACAACATCATC 598
Query 599 ATGATGGTAGCCGGAAAGCGATATTACGGTAGCGGTACAGAAGACAATGATGAAGCCAAG 658
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 599 ATGATGGTAGCCGGAAAACGATATTACGGTACCGGTACAGAAGACAATGATGAAGCCAAG 658
Query 659 CTCGTGAGGGAACTTATATCGGAGGTAGTGACCGGCGCCAGTTCTGGCAATTTGGCTGAC 718
|||||||||||||||||| ||||| || || |||||||| ||||||| |||||||||||
Sbjct 659 CTCGTGAGGGAACTTATAGCGGAGATAATGGCCGGCGCCGGTTCTGGAAATTTGGCTGAT 718
Query 719 TATCTTCCGAT-CATAAATTGGGTCACAAACTTTGAGAACCAGACCAAGATTTTGGGGAA 777
||||||||| | |||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 719 TATCTTCCG-TCCATAAATTGGGTCACAAACTTTGAGAACCAGACCAAAATCTTGGGGAA 777
Query 778 TCGACTCGATAGATTCCTGCAAAAACTGGTTGATGAGAAACGTGCAGAGAAAGAAAAGGG 837
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 TCGACTCGATAGAGTCCTGCAAAAACTGGTTGATGAGAAACGTGCAGAGAAAGAAAAGGG 837
Query 838 TCAAACTTTGATCAATCATTTGCTTTCTTTCCAAGAAACCGAACCCGATTACTATACTGA 897
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 838 TCAAACTTTGATCGATCATTTGCTTTCTTTCCAAGAAACCGAACCCGAGTACTATACTGA 897
Query 898 TGTCATCATCAAAGGAATCATACTCGCTCTGGTACTTGCGGGGACAGATACATCTGCAGT 957
|||||||||||||||||||||||| ||| |||| ||||||||||||||||||||| ||||
Sbjct 898 TGTCATCATCAAAGGAATCATACTGGCTTTGGTTCTTGCGGGGACAGATACATCTTCAGT 957
Query 958 GACGTTGGAATGGGCAATGTCAAATTTGTTGAATCATCCAGGGATACTTGAGAAAGCGAG 1017
|||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||
Sbjct 958 GACGTTGGAATGGGCAATGTCAAATTTGCTGAACCATCCAGAGATACTTGAGAAAGCGAG 1017
Query 1018 AGCGGAAATCGATGAAAAAATCGGTTCAGACCGGTTAGTTGAAGAATCAGACATTGGAAA 1077
|||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 1018 AGCGGAGATCGATGATAAAATCGGTTCAGACCGGTTAGTTGAAGAATCAGATATTGTAAA 1077
Query 1078 TCTCCATTATCTCCAAAACATTGTGTCGGAAACACTACGTTTGTATCCTGCGGTTCCACT 1137
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct 1078 TCTCCATTATCTCCAAAACATTGTGTCAGAAACATTACGTTTGTATCCTGCGGTTCCACT 1137
Query 1138 ACTACTCCCTCATTTCTCATCGGATGAATGTAAAGTGGCGGGCTACGATATGCCACGTCG 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 ACTACTCCCTCATTTCTCATCGGATGAATGTAAAGTGGCGGGCTACGATATGCCACGTCG 1197
Query 1198 CACGTTGTTATTAACAAACGTATGGGCGATGCATAGAGATCCAGGTTTATGGGAAGAGCC 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1198 CACGTTGTTATTAACAAACGTATGGGCGATGCATAGAGATCCAGGTTTATGGGAAGAGCC 1257
Query 1258 AGAGAGGTTCAAACCGGAGAGGTTCGAGAAAGAAGGAGAGACTCGAAAGCTAATGCCGTT 1317
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1258 AGAGAGGTTCAAGCCGGAGAGGTTCGAGAAAGAAGGAGAGGCTCGAAAGCTAATGCCGTT 1317
Query 1318 TGGGATGGGACGACGAGCTTGTCCTGGAGCCGAGCTTGGGAAGCGGTTAGTAAGTCTTGC 1377
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct 1318 TGGGATGGGACGACGAGCTTGTCCTGGAGCTGAGCTTGGGAAGCGGTTAGTGAGCCTTGC 1377
Query 1378 TATTGGCTGTTTGATTCAGTGTTTCGAGTGGGAGAGAGTTGGTGAAGAACTTGTGGACAT 1437
| |||| || |||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 1378 TCTTGGGTGCTTGATTCAGTCTTTCGAGTGGGAGAGAGTTGGTGCAGAACTTGTGGACAT 1437
Query 1438 GACTGAAGGCGAAGGGATCACTATGCCTAAAGCTACTCCGTTGCGAGCTATGTGCAAGGC 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 GACTGAAGGCGAAGGGATCACTATGCCTAAAGCTACTCCGTTGCGAGCTATGTGCAAGGC 1497
Query 1498 ACGTGCCGTTGTTGGTAAAGTGATATAATT 1527
||||||| ||||||||||| |||||||||
Sbjct 1498 ACGTGCCATTGTTGGTAAAACGATATAATT 1527
> AT4G37370.1 | Symbols: CYP81D8 | cytochrome P450, family 81,
subfamily D, polypeptide 8 | chr4:17569828-17571704 REVERSE
LENGTH=1663
Length=1663
Score = 538 bits (291), Expect = 6e-152
Identities = 1084/1453 (75%), Gaps = 110/1453 (8%)
Strand=Plus/Plus
Query 118 GAAA-CCTAATCTTCCTCCTTCTCCGGCTTACCCTTTACCGGTTATCGGCCACCTCCACC 176
|||| || ||||| ||||| |||||| | | |||||||| || || || |||| ||
Sbjct 103 GAAAGCCAAATCTACCTCCGAGTCCGGCATGGTCATTACCGGTGATTGGTCATCTCCGCC 162
Query 177 TTCTCAAGCAACCGGTCCACCGAACATTCCTCTCCATCTCTCAGTCCCTCAGA-AATGCT 235
||||||| | |||| | || || |||||||||||| ||||||| ||||| | | ||||||
Sbjct 163 TTCTCAAACCACCGATTCATCGCACATTCCTCTCCCTCTCTCAATCCCT-AAACAATGCT 221
Query 236 CCGATCTTCTACCTCCGCCTGGGAAACCGCCTCGTTTACGTTATCTCCTCACATTCTATA 295
|||||||||| |||||| || || ||||| ||||||| ||| | ||| ||||| || ||
Sbjct 222 CCGATCTTCTCCCTCCGACTCGGTAACCGACTCGTTTTCGTGAACTCGTCACACTCGATC 281
Query 296 GCCGAAGAATGTTTCACCAAAAACGACGTCGTTCTTGCGAATC-GTCCTGA-TATCATCA 353
||||| |||||||||||||||||||||||||| || ||||| | | || | | |||||
Sbjct 282 GCCGAGGAATGTTTCACCAAAAACGACGTCGTACTGGCGAA-CAGACCAAACT-TCATCC 339
Query 354 TGGCCAAACACGTCGGCTATAAC-TTTAC-CAA-TATGATTGCAGC-ACCTTACGGCGAC 409
| || |||||||| || | || |||| ||| ||||| ||||| || ||||| |||
Sbjct 340 TCGCTAAACACGT-TGC-GT-ACGATTACACAACCATGATCGCAGCTTCC-TACGGTGAC 395
Query 410 CACTGGCGTAACCTCCGCCGCATCGCCGCCGTCGAGATTTTTTCTTCTCATAGAATCAGT 469
||||||||||||||||||||||||| | |||||||||| || || ||| | ||| |
Sbjct 396 CACTGGCGTAACCTCCGCCGCATCGGCTCCGTCGAGATATTCTCCAATCACCGTCTCAAT 455
Query 470 A-CTTTTAAGTCTATCCGTAAAGACGAGATCCGACGGCTCATAACACTTCTCTCTAGAGA 528
| ||||| |||||| |||||||||||||||||||| || | | ||| ||| | ||
Sbjct 456 AGCTTTTT-GTCTATTCGTAAAGACGAGATCCGACGACTTGTGTTTCGTCTTTCTCG-GA 513
Query 529 -CTCCTT-ACACG-GATTTGTTGAA-GTGGAGT-TGAAATCATTATTAGCCAACTTGGCA 583
|| || ||| | | ||||| ||| ||||| | |||||||| | ||| | |||| ||
Sbjct 514 ACTT-TTCACAAGAG-TTTGT-GAAAGTGGA-TATGAAATCAATGTTATCTGACTTAACA 569
Query 584 TTCAACAACATCATCATGA-TGGTAGCCGGAAAGCGATATTACGGTAG-CGGTACAGAAG 641
||||||||||| | | || |||| |||||||| || || ||||| || |||| || |
Sbjct 570 TTCAACAACATTTTAA-GAATGGTGGCCGGAAAACGTTACTACGG-AGACGGTGTTGAGG 627
Query 642 ACAATGATGAAGCCAAGC-TCGTGAGGGAACTTATATCGGAGGTAGTGACCGGCGCCAGT 700
| || || || || | | || || | |||||| |||| || ||| | | || ||
Sbjct 628 ATGATCCGGAGGCTAAACGT-GTCCGGCAGCTTATAGCGGATGTGGTGGCTTGTGCTGGT 686
Query 701 TCTGGCAATT-TGGCTGACTATCTT-CCGATCATAAA-TTGGGTCACAAACTTT-GAGA- 755
|||| || || ||| || ||| ||| | | |||| | || | || ||||
Sbjct 687 GCTGGAAACGCTGT-TGATTA-CTTACCGGTTTTGCGGTTGGTTT-CAGA-TTACGAGAC 742
Query 756 ACCAGACCAAGATTTTGG-GGAATCGACTCGAT-AGATTCCTGCAAAAACTGGTTGATGA 813
|| | |||| |||| || | | ||||| || ||| ||||| | ||||||||||
Sbjct 743 ACGGGTT-AAGAAGTTGGCGGG-TAGGCTCGACGAG-TTCTTGCAAGGATTGGTTGATGA 799
Query 814 GAAACGTGCAGAGAAAGA-AAAGGGTCAA-ACTTTGATCAATCATTTGCTTTCTTTCCAA 871
|||||| | || || || ||||| || ||| ||||| |||| |||||| || | |||
Sbjct 800 GAAACGAGAAGCTAAGGAGAAAGGA--AACACTATGATCGATCACTTGCTTACTCTGCAA 857
Query 872 GAAACCGAACCCGATTACTAT-ACTGAT-GTCATCATCAAAGGAATCATACTCGCTCTGG 929
||| || |||| ||||||| | || ||| || ||||| ||||||| ||| |||||| ||
Sbjct 858 GAATCCCAACCGGATTACT-TCACGGATCGT-ATCATTAAAGGAAACATGCTCGCTTTGA 915
Query 930 TACTTGCGGGGACAGATACATCTGCAGTGACGTTGGAATGGGCAATGTCAAATTTGTTGA 989
|||| || ||||| || ||||| || || ||||| ||||||||| |||| || ||||||
Sbjct 916 TACTAGCAGGGACCGACACATCAGCGGTTACGTTAGAATGGGCATTGTCGAACGTGTTGA 975
Query 990 ATCATCCAGGGAT--ACTTGAGA-AAG-CGAGAGCGGAAATCGAT-GAAAAAATCGGTTC 1044
| ||||| || || | |||| | ||| |||||| ||||||||| |||| | | ||||
Sbjct 976 ACCATCC-GG-ATGTA-TTGA-ACAAGGCGAGAGATGAAATCGATAGAAAGA-TAGGTTT 1030
Query 1045 AGACCGG-TTAGTTGAAGAATCAGACAT-TGGAAATCT-CCATTATCTCCAAAACATTGT 1101
|||| || ||| | || |||||||| || | ||| || || ||||||||||||||||||
Sbjct 1031 AGACAGGCTTA-TGGATGAATCAGATATCTC-AAACCTGCC-TTATCTCCAAAACATTGT 1087
Query 1102 GTCGGAAACACTACGT-TTGTATCCTGCGGTTCC-ACTACTACTCCCTCAT-TT-CTCAT 1157
||| ||||| | || || |||||||||| ||| | | || || ||||| || | | |
Sbjct 1088 GTCTGAAACGTTGCGCCTT-TATCCTGCGGCTCCCA-TGCTTCTTCCTCACGTTGC-C-T 1143
Query 1158 CGGATGAATGTAAAGTGGCGGGCTACGATATGCCACGTCGCACGTTGTTATTAACAAACG 1217
|||| || |||||||| || || ||||||||||| ||| ||||| | |||| || || |
Sbjct 1144 CGGAAGATTGTAAAGTTGCAGGATACGATATGCCGCGTGGCACGATACTATTGACCAATG 1203
Query 1218 TATGGGCGATGCATAGAGATCC--AGGTTTATGGGAAGAGCCAGA-GAGGTTCAAACCGG 1274
| ||||| || || |||||||| || | |||||| || ||| | ||| ||||| || |
Sbjct 1204 TGTGGGCTATACACAGAGATCCTCAGCT--ATGGGATGATCCA-ATGAGCTTCAAGCCAG 1260
Query 1275 AGAGGTTCGAGAAAGAAGGAGA-GACTC-GAAAGCTAATGCCGTTTGGGATGGGACGACG 1332
||||||| |||||||||||||| | ||| ||| |||||||||||||||| | ||| || |
Sbjct 1261 AGAGGTTTGAGAAAGAAGGAGAAG-CTCAGAA-GCTAATGCCGTTTGGGTTAGGAAGAAG 1318
Query 1333 AGCTTGTCCTGGAGCCG-AGCTTGGGA-AGCGG-TTAGTAAGTCTTG-CTATTGGCTGTT 1388
|| |||||||| | | | || || | ||| ||| ||| || | || |||| | |
Sbjct 1319 GGCGTGTCCTGGTTCTGGA-CT-GGCTCATCGGCTTA-TAAACCT-GACTCTTGGATCAT 1374
Query 1389 TGATTCAGTGTTTCGAGTGGGAGA-GAGTTGGTGAAGAACTTGTGGACATGACTGAAGGC 1447
||||||||||||| || ||||||| || |||| |||||| ||||| |||| |||||||
Sbjct 1375 TGATTCAGTGTTTGGAATGGGAGAAGA-TTGGAGAAGAA---GTGGATATGAGTGAAGGC 1430
Query 1448 GAAGG-GATCACTATGCCTAAAGCTACTCCGTTGCGA-GCTATGTGCA-AGGCACGTGCC 1504
|||| | | || ||||||||||| | || ||| || || ||||||| || ||||| ||
Sbjct 1431 AAAGGTGTT-ACAATGCCTAAAGCCAAGCCTTTG-GAAGCCATGTGCAGAG-CACGTCCC 1487
Query 1505 GT-TGTTGGTAAA 1516
| ||||| ||||
Sbjct 1488 -TCTGTTGTTAAA 1499
> AT4G37432.1 | Symbols: | other RNA | chr4:17597179-17598690
REVERSE LENGTH=1101
Length=1101
Score = 69.4 bits (37), Expect = 1e-10
Identities = 39/40 (98%), Gaps = 0/40 (0%)
Strand=Plus/Minus
Query 393 CAGCACCTTACGGCGACCACTGGCGTAACCTCCGCCGCAT 432
|||| |||||||||||||||||||||||||||||||||||
Sbjct 698 CAGCTCCTTACGGCGACCACTGGCGTAACCTCCGCCGCAT 659
> AT4G37430.1 | Symbols: CYP91A2, CYP81F1 | cytochrome P450, family
91, subfamily A, polypeptide 2 | chr4:17597110-17598958
FORWARD LENGTH=1764
Length=1764
Score = 69.4 bits (37), Expect = 1e-10
Identities = 39/40 (98%), Gaps = 0/40 (0%)
Strand=Plus/Plus
Query 393 CAGCACCTTACGGCGACCACTGGCGTAACCTCCGCCGCAT 432
|||| |||||||||||||||||||||||||||||||||||
Sbjct 473 CAGCTCCTTACGGCGACCACTGGCGTAACCTCCGCCGCAT 512
> AT4G37400.1 | Symbols: CYP81F3 | cytochrome P450, family 81,
subfamily F, polypeptide 3 | chr4:17584051-17586360 FORWARD
LENGTH=1714
Length=1714
Score = 60.2 bits (32), Expect = 6e-08
Identities = 34/35 (97%), Gaps = 0/35 (0%)
Strand=Plus/Plus
Query 398 CCTTACGGCGACCACTGGCGTAACCTCCGCCGCAT 432
||||| |||||||||||||||||||||||||||||
Sbjct 400 CCTTATGGCGACCACTGGCGTAACCTCCGCCGCAT 434
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76656232215
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5